2009-11-07 08:53 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: Irred baryon operators can now read multiple displacements for a single quark. Seems to compile and run, but still need to test that the single-displacement case remains unchanged. 2009-11-05 12:40 edwards * main/colorvec/: meson_2pt_twopart_hel.cc, meson_2pt_twopart_hel.ini.xml: Experimental version of helicity codes. 2009-11-05 12:39 edwards * main/colorvec/irreps.h: Added some new tag types for isospin, symmetries, and the like. 2009-11-05 12:24 edwards * main/sfpcac/run_tune/run_colorvec_meson_nf3_mom.pl: Fixed some paths. 2009-11-05 11:32 edwards * main/sfpcac/run_tune/run_colorvec_meson_nf3_mom.pl: Does only momentum 2009-11-05 11:31 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added new eig reader. 2009-11-03 13:53 thomasc * main/reconfit2/load_correlators.cc: Added another check when rephasing and a few other superficial changes 2009-11-02 16:01 dudek * main/reconfit2/: load_correlators.cc, load_correlators.h: new and hopefully improved rephasing routine current writes out too much debug information to STDOUT be on the lookout for WARNING: ... will be telling you if it thinks it has rephased wrongly 2009-10-30 10:12 edwards * main/sfpcac/run_tune/: run_laplace.pl, run_laplace_eigs.pl: New version scripts. 2009-10-29 15:37 edwards * main/sfpcac/Makefile.am: Moved other codes to bin_PROG. 2009-10-29 15:18 thomasc * main/reconfit2/load_correlators.cc: Removed some debugging cout lines 2009-10-29 14:56 edwards * main/sfpcac/sf.ini.xml: Updated. 2009-10-29 14:53 edwards * main/sfpcac/Makefile.am: Movd sf_single_mass to bin_PROGRAMS. 2009-10-29 13:17 edwards * main/colorvec/: simple_meson_operators.cc, simple_meson_operators.h: Added some other XML readers. 2009-10-29 13:16 edwards * main/colorvec/displace.cc: Added flavor as well as paths for LessObj. 2009-10-27 16:16 dudek * main/reconfit2/t0fit.cc: fit.log should now actually give you both the reordered state label and the pre-ordering state label 2009-10-26 23:05 kostas * aclocal.m4, configure, lib/Makefile.am: Fixed the makefile to include the primcolormat and primcolorvec header files 2009-10-26 22:11 edwards * lib/ensem/: ensem_newops.h, ensem_primcolormat.h, ensem_primcolorvec.h, ensem_primitive.h: Added color matrix and vector code from qdp. 2009-10-26 11:51 thomasc * main/reconfit2/variational_fitter.cc: Now the acceptable/best t0 are written out to the end of fit.log 2009-10-25 12:08 dudek * main/reconfit2/: multit0fit.cc, variational_fitter.cc: Compiling with -DUSE_OMP will now allow the t0's to run in parallel across multiple corrs. Memory might cause problems for huge dimension systems. STDOUT output is ugly running in parallel. Changed the fit.log spectrum write-out, shows both the reordered index and the unordered index. 2009-10-25 11:43 thomasc * main/reconfit2/load_correlators.cc: Implemented avgMode "spin": this averages over diagonal spin indicies from 1 to irrepdim (inclusive). 2009-10-24 23:51 edwards * main/colorvec/: threequark_operators.cc, threequark_operators.h: Added a "conj" operator. Really only a convenience for print out operators with a complex conjugation of the spin values (source versus sink operators). 2009-10-24 16:44 thomasc * main/reconfit2/: fit.ini.xml, fit_ini_xml.cc, fit_ini_xml.h, load_correlators.cc, load_correlators.h, variational_fitter.cc: New option avgMode that specifies how/whether averaging is done when loading the correlators from a database: "none" does no averaging, "lorentz" averages over diagonal lorentz indicies, and "spin" will average of spin indicies but is not implemented yet. Reorganised some of RCorrs and CCorrs classes. Bug fix: now timeslice zero is read in. 2009-10-24 14:46 thomasc * main/reconfit2/: load_correlators.cc, load_correlators.h, t0fit.cc, variational_fitter.cc: Reinstated debug modes and check on the value of foldTimeReversal. Fixed bug when foldTimeReversal is "none". Improved extraction of charge and parity from ops list: now if it can't read either of these, it only complains and terminates if foldTimeReversal is not "none". 2009-10-23 17:47 dudek * main/reconfit2/: Makefile.am, ensem_data.cc, ensem_data.h, ensem_matrix_complex.cc, ensem_matrix_complex.h, ensem_matrix_real.cc, ensem_matrix_real.h, fit.ini.xml, fit_correlators.cc, fit_correlators.h, fit_forms.cc, fit_forms.h, fit_ini_xml.cc, fit_ini_xml.h, fit_multiple_princorrs.cc, jackknife_fitter.cc, jackknife_fitter.h, jackknife_linear_fitter.cc, jackknife_linear_fitter.h, linear_algebra.cc, linear_algebra.h, linear_sum_of_exp_fitter.cc, load_correlators.cc, load_correlators.h, multi_princorr_fit.cc, multi_princorr_fit.h, multit0fit.cc, multit0fit.h, plot.cc, plot.h, t0fit.cc, t0fit.h, variational_fitter.cc: new version ... 2009-10-23 17:24 dudek * main/reconfit2/: Makefile.am, ensem_data.cpp, ensem_data.h, ensem_matrix_complex.cpp, ensem_matrix_complex.h, ensem_matrix_real.cpp, ensem_matrix_real.h, fit.ini.xml, fit_correlators.cpp, fit_correlators.h, fit_forms.cpp, fit_forms.h, fit_ini_xml.cpp, fit_ini_xml.h, fit_multiple_princorrs.cpp, jackknife_fitter.cpp, jackknife_fitter.h, jackknife_linear_fitter.cpp, jackknife_linear_fitter.h, linear_algebra.cpp, linear_algebra.h, linear_sum_of_exp_fitter.cpp, load_correlators.cpp, load_correlators.h, multi_princorr_fit.cpp, multi_princorr_fit.h, plot.cpp, plot.h, variational_fitter.cpp, variational_real.cpp, variational_real.h: Cleared out the old files to make way for the new, improved, reconfit 2009-10-21 11:55 tag adat2-19-1 2009-10-21 11:55 thomasc * main/reconfit2/: fit.ini.xml, fit_ini_xml.cpp, fit_ini_xml.h, load_correlators.cpp, load_correlators.h, variational_fitter.cpp: Added an experimental option "avgDiagLorentz" that specifies whether or not diagonal lorentz indicies are averaged over (if not, the src and snk lorentz indicies must be specified in DefaultKeys in the ini xml file). Warning: this hasn't been tested fully. 2009-10-20 21:07 thomasc * main/reconfit2/: fit.ini.xml, fit_ini_xml.cpp, load_correlators.cpp, load_correlators.h: Changed the operator list file format (now each line must be "irrepPC opname"). Corrected what the 'expected' time-reversal symmetry is when the correlator changes charge conj. 2009-10-20 17:44 thomasc * main/reconfit2/: fit.ini.xml, fit_ini_xml.cpp, fit_ini_xml.h, load_correlators.cpp, load_correlators.h: New key "version" in ini xml file. The list of operators must now have each line of the format "irrep opname" -- this is used to extract the charge conj sym of the operator 2009-10-20 16:30 thomasc * main/reconfit2/: fit.ini.xml, fit_ini_xml.cpp, fit_ini_xml.h, load_correlators.cpp, load_correlators.h, variational_fitter.cpp: The ini xml key foldTimeReversal is now a string specifying how time-reversal is folded in. Warning: the 'expected' sign for correlators from one charge conj to another is not correct -- fix for this is in progress. 2009-10-20 14:18 thomasc * main/reconfit2/: load_correlators.cpp, load_correlators.h: Improved method for determining phase of correlators 2009-10-20 10:20 thomasc * main/reconfit2/: load_correlators.cpp, variational_fitter.cpp, variational_real.cpp: Symmetry for folding in time-reversal is now determined based on majority decision. Changed debug modes slightly 2009-10-20 09:58 thomasc * main/reconfit2/load_correlators.cpp: Fixed bug in the implementation of the "foldTimeReversal" option 2009-10-19 11:32 thomasc * main/reconfit2/load_correlators.cpp: Now looks at the time-reversal symmetry of the correlator to get the sign for time-reversal folding. Gives a warning if this is not the "expected" sign 2009-10-18 18:33 thomasc * main/reconfit2/: load_correlators.cpp, load_correlators.h, variational_fitter.cpp: The ini xml key "foldTimeReversal" now specifies whether or not time reversal is folded in to the correlators 2009-10-18 18:11 thomasc * main/reconfit2/: fit.ini.xml, fit_ini_xml.cpp, fit_ini_xml.h, load_correlators.cpp: Added an option in fit.ini.xml to specify whether or not to fold in time reversal. WARNING: this doesn't currently actually do anything! 2009-10-18 17:16 thomasc * main/reconfit2/: load_correlators.cpp, variational_fitter.cpp: Added a check for the expected time-reversal symmetry when loading the correlators 2009-10-15 11:49 edwards * main/colorvec/scripts/irrep.3deriv.list: New subduced ops. 2009-10-15 11:35 edwards * main/colorvec/generate_all_ops.pl: Pull out subduced ops. 2009-10-14 11:54 thomasc * main/reconfit2/fit_correlators.cpp: Bug fix in what happens when no suitable prin corr fits are found 2009-10-13 22:51 edwards * main/colorvec/meson_4pt_dispatch.cc: Changes to make OMP happy. 2009-10-13 22:50 edwards * main/colorvec/meson_4pt_dispatch.cc: Has same changes as in the meson_4pt_dispatch.h 2009-10-13 22:40 edwards * main/colorvec/: meson_4pt.cc, meson_4pt_contract.cc, meson_4pt_contract.h, meson_4pt_dispatch.h: Overhaul to reduce memory footprint. Instead of holding all the annihilation operatos, load them on the fly. Changed looping so only 1 sink temporary is need (per time) as opposed to an array - similar to the changes to meson_2pt.cc and baryon_2pt.cc. Merged in recent changes for 4 Wick contractions. 2009-10-12 21:46 edwards * main/colorvec/scripts/overlap_histogram.pl: Changed where are some print statements. 2009-10-12 18:37 edwards * main/colorvec/scripts/: joint_fit_irreps.pl, overlap_compare.pl, overlap_histogram.pl, state_params.pl: Split off params into a single input file. New joint fitter across irreps that uses these states. 2009-10-12 18:36 edwards * main/colorvec/scripts/excited_spec_box.pl: Changed printing format for irreps on horizontal axis. 2009-10-12 14:46 edwards * main/reconfit2/multi_princorr_fit.cpp: Fixed to hiding of time slices. 2009-10-11 08:45 dudek * main/colorvec/meson_4pt_contract.cc: all four wick terms for isospin 2 2009-10-11 00:46 edwards * main/colorvec/scripts/overlap_histogram.pl: New states. 2009-10-10 21:50 tag qdp1-33-1 2009-10-10 21:50 tag qdp1-34-0 2009-10-10 21:50 edwards * other_libs/filedb/src/ConfDataStoreMultipleDB.h: Changed the getBinary to actually call the internal getBinary. So far, this has been unused in this wrapper class. 2009-10-08 14:35 edwards * main/colorvec/meson_2pt.cc: Now the prop and meson dbs are closed before the opening/writing of the corr dbs. 2009-10-08 14:19 edwards * other_libs/filedb/filehash/ffdb_page.c: Fixed printf message to be "%u". 2009-10-07 22:25 edwards * main/colorvec/meson_2pt.cc: Fixed OMP-ism. 2009-10-06 16:56 tag adat2-19-0 2009-10-06 16:56 edwards * main/colorvec/meson_2pt.cc: Added omp declarations. 2009-10-06 16:53 edwards * NEWS: Info on 2.19.0 2009-10-06 16:51 edwards * aclocal.m4, configure: Induced changes 2009-10-06 16:51 edwards * AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, acinclude.m4, aclocal.m4, adat-config.in, configure, configure.ac: aclocal.m4 2009-10-06 16:51 edwards * main/colorvec/meson_2pt.cc: Changed to use internal twoQuarkContract time slice that is a lower memory version. 2009-10-06 16:50 edwards * configure.ac: Changed to 2.19.0 2009-10-06 16:49 tag adat2-18-7 2009-10-06 16:49 edwards * NEWS: Info on 2.17.7 2009-10-05 17:06 thomasc * main/reconfit2/fit_correlators.cpp: Added a check to catch when the fitted mass is negative, in which case the mass is set to 1.0 2009-10-03 22:49 edwards * main/colorvec/scripts/: nucleon.G1gG2g.list, nucleon.G1uG2u.list: Combined lists. 2009-10-03 21:57 edwards * main/colorvec/clebsch.cc: Trivial stuff. 2009-10-03 18:23 edwards * main/colorvec/scripts/overlap_histogram.pl: Changed so normalization is over all states - not just those in the state list. 2009-10-02 15:47 edwards * main/sfpcac/run_tune/: run_colorvec_baryon_nf3.pl, colorvec_work.pl: Switched to derivatives. 2009-09-28 23:56 edwards * main/colorvec/scripts/overlap_compare.pl: Changed the algorithm for the rescaling factors - more uniform. 2009-09-28 21:48 edwards * main/colorvec/scripts/overlap_compare.pl: Improvements to output. 2009-09-28 19:00 edwards * main/colorvec/scripts/overlap_compare.pl: Overhaul. Loop over states on the outside. 2009-09-28 10:08 edwards * main/colorvec/scripts/overlap_histogram.pl: Some fixes. 2009-09-27 11:24 edwards * main/colorvec/scripts/: overlap_compare.pl, overlap_histogram.pl: Added more states. 2009-09-27 00:06 edwards * main/colorvec/scripts/overlap_compare.pl: New datasets. 2009-09-26 11:56 edwards * main/colorvec/scripts/excited_spec_box.pl: Made labels for x-axis. 2009-09-26 10:07 edwards * main/colorvec/scripts/excited_spec_box.pl: Fixed a string def in axis labels. 2009-09-25 17:59 edwards * main/colorvec/scripts/: excited_spec_box.pl, overlap_histogram.pl, run_baryon_2pt_all_irrep.pl: Changes. 2009-09-25 17:35 dudek * main/reconfit2/fit_multiple_princorrs.cpp: fixed the argument label being wrongly ordered 2009-09-25 17:34 dudek * main/reconfit2/: Makefile.am, fit_multiple_princorrs.cpp, jackknife_fitter.cpp, multi_princorr_fit.cpp, multi_princorr_fit.h: added a code to fit multiple principle correlators with a common mass 2009-09-25 11:40 edwards * main/colorvec/scripts/excited_spec_box.pl: Box plotter - with spins. 2009-09-24 23:24 edwards * main/colorvec/scripts/overlap_histogram.pl: Some improvements. 2009-09-22 10:56 edwards * other_libs/filedb/src/ConfDataDBMerger.h: Commented out some debugging. 2009-09-21 00:03 edwards * main/colorvec/: twoquark_dist_obj.cc, twoquark_dist_obj.h: Added a clear() function. 2009-09-20 15:15 edwards * main/colorvec/: threequark_contract_ops.cc, threequark_dist_obj.cc, threequark_dist_obj.h: Added clear() to the dist object. Will clean it out. 2009-09-19 21:35 edwards * main/colorvec/dbavg.cc: Bug fix in accumulation. 2009-09-18 23:25 tag adat2-18-6 2009-09-18 23:25 edwards * NEWS: Info on 2.18.6 2009-09-18 11:30 edwards * main/colorvec/baryon_2pt.cc: Rearranged where the unique spin source_index_map is computed. Pulled it out of the computational loop. 2009-09-15 23:56 edwards * main/colorvec/scripts/run_baryon_2pt_all_irrep.pl: Changed output path of dbs. 2009-09-15 16:57 edwards * main/colorvec/baryon_2pt.cc: Bug fix. Only from OMP side. 2009-09-15 16:39 edwards * main/colorvec/baryon_2pt.cc: Fixed OMP-isms. 2009-09-15 16:35 edwards * main/colorvec/baryon_2pt.cc: Major rearrangement of code. Call a contract time-slice within this code. May break it back out. Get rid of holding any annih-ops for all Nt_chunk slices. Instead, load them in the thread loop. Should cut down on memory. Will see how this works. 2009-09-15 16:32 edwards * main/colorvec/: baryon_3pt.cc, meson_2pt.cc, meson_3pt.cc, meson_4pt.cc: Added check if output db is present, then do not reenter the metadata. 2009-09-15 11:44 tag adat2-18-5 2009-09-15 11:44 edwards * NEWS: Info on 2.18.5 2009-09-14 23:28 edwards * main/colorvec/scripts/run_baryon_2pt_all_irrep.pl: New input params. 2009-09-14 22:54 edwards * main/colorvec/baryon_2pt.cc: Changed slightly a debugging output. 2009-09-14 22:41 edwards * main/colorvec/deriv_baryon_operators.cc: Turned off some debugging. 2009-09-14 22:28 edwards * main/colorvec/: baryon_2pt.cc, threequark_contract_ops.cc: Commented out some debugging couts. 2009-09-14 17:21 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added bicg drivers. Turned off checking of mpirun errors which are apparently bogus. 2009-09-14 17:14 edwards * main/colorvec/displace.cc: Switched to using only displacements. 2009-09-14 15:41 tag adat2-18-4 2009-09-14 15:41 edwards * main/colorvec/: meson_4pt.cc, baryon_2pt.cc: Fixed the region for "t" in the annih and creat ops section. 2009-09-14 15:39 edwards * main/colorvec/meson_2pt.cc: Fixed the region for "t" in the annih and creat op sections. 2009-09-12 15:37 tag adat2-18-3 2009-09-12 15:37 edwards * NEWS: Info on 2.28.3 2009-09-12 15:33 tag adat2-18-2 2009-09-12 15:33 edwards * NEWS: Info on 2.18.2 2009-09-11 00:24 edwards * main/colorvec/meson_4pt.ini.xml: Added time cutoff 2009-09-11 00:22 edwards * main/colorvec/: meson_2pt.cc, meson_2pt.ini.xml, meson_4pt.cc: Added time cutoff for correlator. 2009-09-10 23:45 edwards * main/colorvec/Makefile.am: Added dbavg.cc . 2009-09-10 23:45 edwards * main/colorvec/dbavg.cc: Code to average (or rather take linear combinations) of multiple DBs. 2009-09-10 23:39 tag qdp1-33-0 2009-09-10 23:39 edwards * other_libs/filedb/src/AllConfStoreDB.h: Removed a debugging cerr statement. 2009-09-08 00:34 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.delta.ini.xml, baryon_2pt.deriv.ini.xml, baryon_2pt.ini.xml: Now supports a "restricted plateau" meaning the plateau can be shorter than the actual lattice length. This is a cost optimization - don't compute where the correlator will be noise. The averaging over num_t0 is still done appropriately, namely, from t0 -> t0+Nt_corr. Updated the input version accordingly. 2009-09-07 12:42 edwards * main/colorvec/baryon_2pt_contract.cc: HUGE memory optimization! Can eliminate all sink temporaries except for one needed for on the fly. 2009-09-07 12:41 edwards * main/colorvec/: baryon_2pt.cc, baryon_3pt.cc, meson_2pt.cc, meson_2pt_su.cc, meson_3pt.cc: Added checks of "open" call to db. 2009-09-07 00:22 tag adat2-18-1 2009-09-07 00:22 edwards * NEWS: Info on 1.18.1 2009-09-04 20:00 thomasc * main/reconfit2/variational_real.cpp: Fixed bug in the way states are ordered on each t0 to match order on t0ref 2009-08-28 11:47 tag filedb1-1 2009-08-28 11:47 edwards * other_libs/filedb/NEWS: Info on 1.1 2009-08-28 11:43 edwards * other_libs/filedb/: aclocal.m4, configure: Induced changes 2009-08-28 11:43 edwards * other_libs/filedb/configure.ac: Added some fileExist functions to the ConfDataStore classes. 2009-08-28 11:42 edwards * other_libs/filedb/src/: ConfDataStoreDB.h, DBFunc.cpp, DBFunc.h: Added a fileExists function. 2009-08-28 11:42 edwards * other_libs/filedb/src/ConfDataStoreMultipleDB.h: Added a fileExists function. Removed unsupported code. 2009-08-27 13:26 thomasc * main/colorvec/meson_2pt_su.cc: Changed back to previous insertion momentum sign. It should be correct now. 2009-08-26 16:06 thomasc * main/colorvec/meson_2pt_su.cc: Fixed insertion momentum convention 2009-08-25 16:50 thomasc * main/colorvec/meson_2pt_su.cc: Fixed the way non-zero momenta are dealt with 2009-08-25 13:09 thomasc * main/colorvec/: twoquark_contract_ops.cc, twoquark_contract_ops.h: Fixed bug in TraceRep 2009-08-25 12:14 thomasc * main/colorvec/meson_2pt_su.cc: Changes to improve code readibility; should be no changes to functionality. 2009-08-25 11:41 colin * other_libs/xpath_reader/lib/basic_xpath_reader.cc: Set context to root element after XMLReader open. 2009-08-24 21:46 thomasc * main/colorvec/: meson_2pt_su.cc, meson_2pt_su.ini.xml: Minor changes 2009-08-24 17:24 thomasc * main/colorvec/: Makefile.am, meson_2pt_su.cc, meson_2pt_su.ini.xml: First go at a new program to create a 2-pt correlator with any operator at the source (using colorvec) and an unsmeared gamma at the sink; uses genprops and meson elementals. Warning: output may be junk! 2009-08-24 16:26 edwards * main/colorvec/scripts/overlap_compare.pl: First version of Z comparison. 2009-08-24 16:26 edwards * main/colorvec/scripts/overlap_histogram.pl: Small changes. 2009-08-23 16:12 thomasc * main/colorvec/: meson_2pt_dispatch.cc, meson_2pt_dispatch.h: Bug fixed 2009-08-23 15:12 thomasc * main/colorvec/: meson_2pt_dispatch.cc, meson_2pt_dispatch.h: Added routine to enable local operators at the sink in two-point functions 2009-08-22 08:44 tag adat2-18-0 2009-08-22 08:44 edwards * NEWS: Info on 2.18 2009-08-22 08:42 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.delta.ini.xml, baryon_2pt.deriv.ini.xml, baryon_2pt.ini.xml, baryon_3pt.cc, baryon_3pt.ini.xml, baryon_elem_op.h, baryon_file_test.cc, deriv_baryon_operators.cc, generate_bar_deriv_reg.pl, genprop_obj.cc, genprop_obj.h, meson_2pt.3deriv.ini.xml, meson_2pt.cc, meson_2pt.ini.xml, meson_3pt.cc, meson_3pt.ini.xml, meson_4pt.cc, meson_4pt.ini.xml, meson_elem_op.h, prop_obj.cc, prop_obj.h: Switched to passing in an array of dbs for input prop_dbs,baryon_dbs,meson_dbs, genprop_dbs. The codes call a new ConfDataStoreMultipleDB.h that is a wrapper over dbs. Just for simple lookups. Only for read-only DBs. 2009-08-22 08:41 edwards * main/colorvec/scripts/overlap_histogram.pl: Put in printing of info. 2009-08-22 08:40 edwards * main/colorvec/: wick.cc, wick.h: Indented so I can read it. 2009-08-22 08:40 edwards * main/colorvec/meson_4pt_contract.cc: Fixed to take adjoint of left and right op before multiplying against peram - all for the creation op. 2009-08-22 08:37 edwards * configure: Induced changes 2009-08-22 08:36 edwards * configure.ac: Changed to 2.18 2009-08-22 08:33 tag filedb1-0 2009-08-22 08:33 edwards * other_libs/filedb/aclocal.m4, other_libs/filedb/configure, aclocal.m4: Induced changes 2009-08-22 08:33 edwards * other_libs/filedb/configure.ac: Changed to version 1. 2009-08-22 08:32 edwards * other_libs/filedb/src/: ConfDataStoreMultipleDB.h, Makefile.am: Added a wrapper of multiple DBs. 2009-08-21 17:09 dgr * main/colorvec/: meson_2pt_contract.cc, meson_2pt_contract.h, twoquark_contract_ops.cc, twoquark_contract_ops.h: Adding some routines to enable local operators at the sink in two-point functions 2009-08-18 10:50 tag adat2-17-4 2009-08-18 10:50 edwards * NEWS: Info on 2.17.4 2009-08-18 10:49 edwards * aclocal.m4, configure: Induced changes 2009-08-18 10:49 edwards * configure.ac: Changed to 2.17.4 2009-08-18 10:46 edwards * aclocal.m4, configure: Induced changes 2009-08-18 10:46 edwards * configure.ac: Changed to 2.18 2009-08-17 01:42 edwards * main/colorvec/scripts/overlap_histogram.pl: Added desired states. 2009-08-17 00:50 edwards * main/colorvec/scripts/overlap_histogram.pl: Now read an operator list to use. 2009-08-16 20:06 edwards * main/colorvec/scripts/overlap_histogram.pl: Take input args now. 2009-08-16 16:02 edwards * main/colorvec/scripts/overlap_histogram.pl: More improvements on boxes. 2009-08-16 14:51 edwards * main/colorvec/scripts/overlap_histogram.pl: Switched to box plots. 2009-08-15 02:36 edwards * main/colorvec/scripts/overlap_histogram.pl: Attempt to histogram the Z's. 2009-08-12 17:43 edwards * main/colorvec/scripts/: irrep.1mm.list, nucleon.G1g.list, nucleon.G1u.list, nucleon.G2g.list, nucleon.G2u.list, nucleon.Hg.list, nucleon.Hu.list: New op lists. 2009-08-12 17:43 edwards * main/colorvec/scripts/baryon_file_test.pl: Look for orthog. 2009-08-12 17:42 edwards * main/colorvec/scripts/: run_baryon_2pt_orthog.pl, run_baryon_2pt_all_irrep.pl: Changed to version 9. 2009-08-07 00:27 edwards * main/colorvec/deriv_baryon_operators.cc: Removed normalization of J_op. 2009-08-06 11:16 edwards * main/colorvec/meson_4pt.cc: Changed id in db file to be hadron2Pt. It is not a new hadron4Pt. 2009-08-06 11:12 edwards * main/colorvec/meson_4pt.cc: Changed input version. 2009-08-05 22:34 edwards * main/colorvec/meson_4pt.ini.xml: Sample input. 2009-08-05 01:17 edwards * main/colorvec/: deriv_baryon_operators.cc, displace.cc, displace.h: Changed normalizations of spinors and intermediate J_op. Changed/fixed where subduction is used. More transparent now. Moved off collection of unique displacements for three-quark ops. 2009-08-04 14:56 edwards * main/colorvec/spin_rep.cc: Added a roundoff check. 2009-08-04 14:56 edwards * main/colorvec/: deriv_baryon_operators.cc, displace.cc, displace.h: Put in a normalize for the 3q ops. 2009-08-04 11:51 edwards * main/colorvec/baryon_2pt.ini.xml: Removed second config entry. 2009-08-04 11:49 edwards * main/colorvec/: baryon_2pt.delta.ini.xml, baryon_2pt.deriv.ini.xml, baryon_2pt.ini.xml, baryon_3pt.ini.xml: Changed to version 9. Removed flavor input. 2009-08-04 11:48 edwards * main/colorvec/simple_baryon_operators.h: Added getFlavor(). The flavor is now taken from the operators. 2009-08-04 11:47 edwards * main/colorvec/: baryon_2pt.cc, baryon_3pt.cc, irred_baryon_operators.h, threequark_contract_ops.cc, threequark_operators.h: Added getFlavor(). The flavor string is now taken from the operators. 2009-08-04 11:42 edwards * main/colorvec/deriv_baryon_operators.h: Added getFlavor(). 2009-08-04 11:40 edwards * main/colorvec/deriv_baryon_operators.cc: Conventions for source coefficients should not be conjugated. However, do conjugate at the sink. 2009-08-04 01:48 edwards * main/sfpcac/run_tune/run_colorvec_baryon_nf3.pl: Run displaced elementals. 2009-08-04 01:48 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added displaced baryon elementals. 2009-08-04 00:32 edwards * main/sfpcac/run_tune/gen_bar_derivs.pl: Generate baryon elemental displacement list. 2009-07-30 12:16 edwards * main/colorvec/baryon_2pt.cc: Allow writing the operator. 2009-07-29 12:58 edwards * main/sfpcac/run_tune/run_laplace_eigs.pl: Version to produce a single lime file with the eigenvectors. 2009-07-29 00:04 edwards * main/colorvec/: displace.cc, displace.h: Added an adjoint operator. 2009-07-28 17:08 edwards * main/colorvec/generate_bar_deriv_reg.pl: Fixed where the actual BaryonSpinOp container is printed. 2009-07-28 17:07 edwards * main/colorvec/subduce_tables.cc: Added embeddings. 2009-07-28 11:38 chikhimw * main/colorvec/wick.ini.xml: Wickology input sample xml file(wick.ini.xml) uploaded 2009-07-28 11:22 chikhimw * main/colorvec/: wick.cc, wick.h: Wickology Program(wick.cc and wick.h) Updated 2009-07-27 23:33 tag adat2-17-3 2009-07-27 23:33 edwards * main/colorvec/deriv_baryon_operators.cc: Switched back to full dirac spin op indices. Since canonical order is done upon spinor creation, no problem with later applying derivs. 2009-07-27 23:31 edwards * main/colorvec/displace.cc: Now use a better sort method in canonicalOrder. 2009-07-27 23:31 edwards * main/colorvec/: scripts/delta.irrep.list, baryon_2pt.delta.ini.xml: Delta operators. 2009-07-27 14:41 edwards * main/colorvec/deriv_baryon_operators.cc: Changed so canonical ordering happens *before* any derivatives are done. Added new style of printing the ops. 2009-07-27 14:39 edwards * main/colorvec/: threequark_operators.cc, threequark_operators.h: Added printOp. 2009-07-25 23:23 edwards * main/colorvec/scripts/run_baryon_2pt_all_irrep.pl: Had problems with passing around hashes. Switched back to earlier version, with a few updates. Runs over rows. 2009-07-25 15:25 edwards * main/colorvec/scripts/run_baryon_2pt_all_irrep.pl: Updated. Now runs over rows of irreps. 2009-07-24 23:54 edwards * main/colorvec/: baryon_2pt.deriv.ini.xml, generate_all_baryon_ops.pl: All possible rows now. 2009-07-24 23:51 edwards * main/colorvec/scripts/baryon_file_test.pl: Turned back on positivity and direction checks. Fixed bug related to new indexing scheme in direction checks. 2009-07-24 22:53 edwards * main/colorvec/baryon_2pt.deriv.ini.xml: Added all the possible nucleon deriv ops. 2009-07-24 19:00 edwards * main/colorvec/scripts/colorvec_scripts.pl: Added find_file_old 2009-07-24 18:59 edwards * main/colorvec/scripts/run_baryon_2pt_all_irrep.pl: Changed some file names. 2009-07-24 18:58 edwards * main/colorvec/scripts/run_baryon_2pt_orthog.pl: For orthogonality checks. 2009-07-24 18:57 edwards * main/colorvec/scripts/: run_meson_2pt_all_irrep.pl, run_meson_3pt_irrep_sink.pl: Updated. 2009-07-24 18:10 edwards * main/colorvec/deriv_baryon_operators.cc: Took out phase from D1_J1_Op. 2009-07-24 17:56 edwards * main/colorvec/scripts/baryon.irrep.list: Added more ops. 2009-07-24 17:47 edwards * main/colorvec/deriv_baryon_operators.cc: Bug fix in derivative construction. 2009-07-24 17:32 edwards * main/colorvec/subduce_tables.cc: Now produce tex output. 2009-07-23 23:26 edwards * main/colorvec/: deriv_baryon_operators.cc, generate_bar_deriv_reg.pl: Added some other ops - the D2QS3J1 guys. 2009-07-23 12:13 edwards * main/colorvec/scripts/baryon_file_test.pl: Switched to an op list for the sink baryon ops used in the orthog tests. 2009-07-22 23:50 edwards * main/colorvec/scripts/baryon_file_test.pl: Fixed mass. 2009-07-22 12:40 edwards * main/colorvec/deriv_baryon_operators.cc: Grrh. Removed test code which caused a bug in the rightDeriv. Changed normalizations of S and A dirac ops. 2009-07-21 18:25 edwards * main/colorvec/deriv_baryon_operators.cc: Changed getSpin to return 1-based to be consistent with everything else. 2009-07-21 14:35 edwards * main/colorvec/scripts/baryon_file_test.pl: Fixed some little things. 2009-07-21 14:03 edwards * main/colorvec/scripts/baryon_file_test.pl: Baryon file test. 2009-07-21 10:22 thomasc * main/colorvec/meson_2pt.cc: Fixed bug in the way that multiple peramb databases are dealt with. This problem is only apparent when the first and second quark masses are not equal. 2009-07-20 23:51 edwards * main/colorvec/generate_all_baryon_ops.pl: Now use 7/2 ops. 2009-07-20 23:22 edwards * main/colorvec/scripts/: baryon.irrep.list, baryon_file_test.pl, run_baryon_2pt_all_irrep.pl: Start of baryon tests. 2009-07-20 23:05 edwards * main/colorvec/subduce_tables.cc: Bug fix in dim() returned in subduce tables. 2009-07-20 23:03 edwards * main/colorvec/deriv_baryon_operators.cc: Bug fix in dim() returned in subduce tables. Should be the J size, not target rep size. 2009-07-19 14:07 edwards * main/colorvec/deriv_baryon_operators.cc: Added fixed up subduction tables from the subduce_tables code. 2009-07-19 14:07 edwards * main/colorvec/Makefile.am: Added subduce_tables 2009-07-19 13:58 edwards * main/colorvec/subduce_tables.cc: Added up through J=3 and J=7/2. 2009-07-19 02:33 edwards * main/colorvec/subduce_tables.cc: First version that computes subduction tables. 2009-07-19 02:30 edwards * main/colorvec/subduce_tables.cc: [no log message] 2009-07-18 17:29 edwards * main/colorvec/: deriv_baryon_operators.cc, subduce_tables.cc: Some bug fixes in subduce tables. 2009-07-18 17:02 chen * other_libs/filedb/filehash/: createStrings.c, ffdb_page.c, tcheck.c, tcreate.c, tdualwrite.c: minor test code change 2009-07-18 17:02 chen * other_libs/filedb/filehash/: ffdb_pagepool.c, ffdb_pagepool.h: Fix a bug when cache size is not big enough by changing pgp->npages to be number of pages in the file and maxpgno to be maximum page number currently in use 2009-07-17 14:41 bjoo * other_libs/xpath_reader/: aclocal.m4, configure, config/missing: Cleaned up with XLC 2009-07-17 01:38 edwards * main/colorvec/deriv_baryon_operators.cc: Fixed bug in LessObj messing up the MapDeriv. Started weeding out redundant terms in DiracOp tables. 2009-07-17 00:12 edwards * main/colorvec/deriv_baryon_operators.cc: Changed so the norm is automatic. 2009-07-16 23:00 edwards * main/colorvec/t_db.cc: Set the cache size. Now, the insertion bug is reproduced. 2009-07-16 14:51 edwards * main/colorvec/: Makefile.am, t_db.cc: Added check of writing a prop db. 2009-07-16 00:43 edwards * main/colorvec/: deriv_baryon_operators.cc, irreps.h: Should now have proper clebsch's used. Changed around how the clebsch's are constructed. 2009-07-16 00:41 edwards * main/colorvec/displace.cc: Renamed some of the canonical order stuff - only for baryons. 2009-07-16 00:40 edwards * main/colorvec/generate_all_baryon_ops.pl: Added proper output. 2009-07-15 13:48 edwards * lib/adat/adat_arrays.h: Added some more functions to the arrays. 2009-07-08 17:50 dudek * main/reconfit2/fit_correlators.cpp: abortive changes to prin corr fitting lesson learned - work with a small noise ratio cutoff 2009-07-06 13:53 dudek * main/colorvec/: deriv_meson_operators.cc, simple_meson_operators.cc: fixed typo in E-type subduction 2009-07-05 11:38 dudek * main/reconfit2/: Makefile.am, ensem_matrix_real.cpp, ensem_matrix_real.h, fit_forms.h, jackknife_linear_fitter.cpp, jackknife_linear_fitter.h, linear_sum_of_exp_fitter.cpp: added linear fitter for two and three-point functions 2009-07-04 11:21 edwards * main/colorvec/: deriv_baryon_operators.cc, generate_bar_deriv_reg.pl: Fixed up registrations for all possible J{0,1,2}*{1/2,3/2} -> 1/2 ... 7/2. 2009-07-03 17:09 edwards * aclocal.m4, configure: Induced changes 2009-07-03 17:07 edwards * configure.ac: Added configure of reconfi2/Makefile 2009-07-03 14:52 thomasc * main/reconfit/: fit_variational_real_db.cpp, fitinixml.h, fitiniexample_ensem.xml: Changed debug modes, updated fitiniexample_ensem.xml and fixed typo in comment 2009-07-03 08:16 edwards * main/sfpcac/run_tune/colorvec_work.pl: More general RNG. 2009-07-02 16:24 edwards * main/colorvec/: deriv_baryon_operators.cc, irreps.h: Removed redundant "Spin*Rep" in favor of "J*Rep". 2009-07-02 10:37 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_annih_prop.pl: Updated how annih task is egenerated. 2009-07-01 09:51 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_annih_prop.pl: Added annihilation prop calculations. 2009-06-30 14:16 dudek * main/colorvec/: deriv_meson_operators.cc, irreps.h: added subduced meson operators 2009-06-28 12:57 edwards * lib/adat/adat_arrays.h: Added 2d array with offset=1. 2009-06-28 00:31 edwards * main/colorvec/deriv_baryon_operators.cc: Fixed typo. 2009-06-28 00:30 edwards * main/colorvec/deriv_baryon_operators.cc: Switched to using subduced style ops. 2009-06-28 00:29 edwards * main/colorvec/irreps.h: Add spin irreps. 2009-06-28 00:29 edwards * main/colorvec/: Makefile.am, clebsch.cc, clebsch.h: Added clebsch.{h,cc} 2009-06-26 15:07 tag adat2-17-2 2009-06-26 15:07 edwards * main/colorvec/clebsch.cc: A CG cod. 2009-06-25 16:15 edwards * main/colorvec/: deriv_baryon_operators.cc, generate_all_baryon_ops.pl, generate_bar_deriv_reg.pl: Implemented all possible isospins and isospin_z. 2009-06-25 15:21 edwards * main/colorvec/: baryon_3pt.ini.xml, threequark_operators.cc, twoquark_operators.cc: Changed momentum convention. The sign of the momentum is flipped when the elementals are read. The point is that in chroma, the elementals are formed using the FT of \int dx exp(+ipx) f(x) . However, the "conventional" convention is exp(-ipx). So, the flipping the sign of mom when the elementals are read matches this latter convention. The genprops stay the same, namely exp(+iqx). So, the 3-momentum conservation implies q = p_f - p_i. 2009-06-25 15:18 edwards * main/colorvec/mom_conv.cc: Removed commented code. 2009-06-25 02:17 edwards * main/colorvec/: deriv_baryon_operators.cc, generate_all_baryon_ops.pl, generate_bar_deriv_reg.pl: Added "E" deriv ops. 2009-06-25 01:51 edwards * main/colorvec/: generate_all_baryon_ops.pl, generate_bar_deriv_reg.pl: New scripts. 2009-06-25 01:46 edwards * main/colorvec/deriv_baryon_operators.cc: Automated some of the registration. Lots of new ops. 2009-06-24 14:50 edwards * main/colorvec/deriv_baryon_operators.cc: More general derivative structure. Now they are work on their respective quark slots. They can be built from other derivs. There is one final combo deriv applied to the dirac fields. Completely general - supports any number of derivs. 2009-06-24 13:38 edwards * main/colorvec/deriv_baryon_operators.cc: Some more fixes on CG's. 2009-06-24 12:50 edwards * main/colorvec/deriv_baryon_operators.cc: More clebsch-s. 2009-06-24 00:44 edwards * main/colorvec/deriv_baryon_operators.cc: Added some Delta-s. 2009-06-24 00:42 edwards * main/colorvec/displace.cc: Bug fix in the swapFlavor and swapQuark routines. 2009-06-24 00:27 edwards * main/colorvec/deriv_baryon_operators.cc: Added some more ops and trivial CG's. 2009-06-24 00:03 edwards * main/colorvec/deriv_baryon_operators.cc: Added new op. 2009-06-23 23:41 edwards * main/colorvec/: baryon_2pt.cc, deriv_baryon_operators.cc: Fixed parities in DiracOps. 2009-06-23 22:40 edwards * main/colorvec/deriv_baryon_operators.cc: Grrh, another little fix. 2009-06-23 22:39 edwards * main/colorvec/deriv_baryon_operators.cc: Switched to using proper nabla derivative (circular pol.) 2009-06-23 19:00 edwards * main/colorvec/deriv_baryon_operators.cc: Added all possible dirac spin combinations. 2009-06-23 16:32 edwards * main/colorvec/: mom_conv.cc, mom_conv.h: Cleaned out unused code. 2009-06-23 15:46 edwards * main/colorvec/: baryon_2pt.ini.xml, deriv_baryon_operators.cc, displace.cc, displace.h, irreps.h, spin_rep.cc, spin_rep.h: More support for derivative baryon ops. Now use 1-based arrays for those critters. Changing the names of the deriv baryon ops. 2009-06-23 15:45 edwards * lib/Makefile.am: Added adat_arrays.h 2009-06-23 15:45 edwards * lib/adat/adat_arrays.h: One based arrays. 2009-06-23 01:22 edwards * main/colorvec/: deriv_baryon_operators.cc, displace.cc, displace.h: Rerranged how displacements are done in derivative baryons. 2009-06-20 17:41 tag adat2-17-1 2009-06-20 17:41 edwards * main/colorvec/meson_2pt.cc: Fixed some comments. 2009-06-17 15:14 edwards * main/colorvec/: baryon_2pt.ini.xml, baryon_3pt.ini.xml: New version of input files. 2009-06-15 17:39 tag adat2-17-0 2009-06-15 17:39 edwards * NEWS: Info on 2.17 2009-06-15 17:37 edwards * aclocal.m4, configure: Induced changes 2009-06-15 17:37 edwards * configure.ac: Changed to 2.17 2009-06-15 17:36 edwards * main/colorvec/: Makefile.am, baryon_2pt.cc, baryon_2pt.ini.xml, baryon_3pt.cc, contract_opt.cc, contract_opt.h, deriv_baryon_operators.cc, deriv_baryon_operators.h, deriv_meson_operators.cc, deriv_meson_operators.h, displace.cc, displace.h, generate_all_ops.pl, irred_baryon_operators.cc, irred_baryon_operators.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.3deriv.ini.xml, meson_2pt.cc, meson_2pt.ini.xml, meson_2pt_contract.cc, meson_2pt_contract.h, meson_3pt.cc, meson_3pt.ini.xml, meson_4pt.cc, meson_4pt_contract.cc, meson_elem_op.h, meson_meson_operators.cc, meson_meson_operators.h, mom_conv.cc, simple_baryon_operators.cc, simple_baryon_operators.h, simple_meson_operators.cc, simple_meson_operators.h, spin_rep.cc, spin_rep.h, threequark_initialize_ops.cc, threequark_initialize_ops.h, threequark_operators.cc, threequark_operators.h, threequark_operators_factory.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_dist_obj.cc, twoquark_dist_obj.h, twoquark_initialize_ops.cc, twoquark_initialize_ops.h, twoquark_operators.cc, twoquark_operators.h, twoquark_operators_factory.h: Major overhaul of meson 2pt and 3pt. Now use a "dense" version of the meson operators. Changed convention so that the source is daggered. Changed the momentum conventions to have +p_i which is effectively -p_i because of the dagger. The sink is now p_f. Now the meson and baryon codes should agree. Switched to using a gamma_4 on the source meson and baryon ops. There is a gamma_4 for each soure spin index. This goes along with daggers. Have a source boolean flag for construction. Now the "construct" function only takes the time slice. Otherwise, mom. and smearing have been pushed into the ops. 2009-06-15 17:33 tag adat2-16-0 2009-06-15 17:33 edwards * NEWS: Info on 2.16 2009-06-15 17:31 edwards * aclocal.m4, configure: Induced changes 2009-06-15 17:31 edwards * configure.ac: Changed to 2.16 2009-06-12 20:05 edwards * lib/adat/objfactory.h: Added Parm6 variant. 2009-06-12 17:29 dudek * main/reconfit2/: fit_forms.cpp, jackknife_fitter.cpp, variational_fitter.cpp, variational_real.cpp, variational_real.h: assorted changes, mostly w.r.t Z fitting 2009-06-11 16:54 edwards * main/colorvec/: Makefile.am, dbcombine.cc: Added dbcombine. Will combine multiple single corr dbs into one db. 2009-06-09 11:39 edwards * main/colorvec/scripts/run_meson_3pt_irrep_sink.pl: Removed corrmass from input - now computed. Fixed helpful usage message. 2009-06-08 16:09 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added 3-link displacements to mesons. 2009-06-05 17:27 edwards * main/sfpcac/run_tune/colorvec_work.pl: Changed require for run_program. 2009-06-05 17:08 edwards * main/sfpcac/run_tune/run_colorvec_genprop_list.pl: Current run script. 2009-06-03 17:45 dudek * main/reconfit2/variational_real.cpp: fixed dumb typos 2009-06-03 17:14 dudek * aclocal.m4, configure: induced changes 2009-06-03 17:13 dudek * main/reconfit2/: Makefile.am, ensem_data.cpp, ensem_data.h, ensem_matrix_complex.cpp, ensem_matrix_complex.h, ensem_matrix_real.cpp, ensem_matrix_real.h, fit.ini.xml, fit_correlators.cpp, fit_correlators.h, fit_forms.cpp, fit_forms.h, fit_ini_xml.cpp, fit_ini_xml.h, jackknife_fitter.cpp, jackknife_fitter.h, linear_algebra.cpp, linear_algebra.h, load_correlators.cpp, load_correlators.h, plot.cpp, plot.h, variational_fitter.cpp, variational_real.cpp, variational_real.h: Added new variational fitting code. 2009-06-02 22:26 tag qdp1-32-2 2009-06-02 22:26 edwards * other_libs/filedb/filehash/ffdb_hash.c: Turn off some debugging. 2009-06-02 00:54 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, baryon_3pt.cc, baryon_3pt.ini.xml: Temporary fix for baryon source momentum phase convention. This needs a reorg, along with mesons. The baryons are conjugated at the source, but the mesons are not. This will foul up q=p_f-p_i. Want to change mesons to follow that, and dagger the source. 2009-06-01 11:02 jbulava * main/colorvec/: baryon_2pt.cc, baryon_2pt_contract.cc, baryon_2pt_contract.h, baryon_2pt_dispatch.cc, baryon_2pt_dispatch.h, baryon_3pt.cc, threequark_contract_ops.cc, threequark_contract_ops.h: Added a 'flavor' tag. This is a string which will turn off the second term in the wick contractions if it is equal to 'uds'. Seems to compile. 2009-05-19 16:36 tag adat2-15-0 2009-05-19 16:36 edwards * NEWS: Info on 2.15 2009-05-19 16:33 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, baryon_2pt_contract.h, baryon_3pt.cc, baryon_3pt.ini.xml, baryon_elem_op.cc, baryon_elem_op.h, deriv_baryon_operators.cc, deriv_baryon_operators.h, deriv_meson_operators.cc, deriv_meson_operators.h, irred_baryon_operators.cc, irred_baryon_operators.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, meson_3pt.cc, meson_4pt.cc, meson_meson_operators.cc, meson_meson_operators.h, simple_baryon_operators.cc, simple_baryon_operators.h, simple_meson_operators.cc, simple_meson_operators.h, threequark_contract_ops.cc, threequark_contract_ops.h, threequark_dist_obj.cc, threequark_dist_obj.h, threequark_operators.cc, threequark_operators.h, threequark_operators_factory.h, twoquark_operators.cc, twoquark_operators.h: Major change to baryons. Switched baryon operators from a sparse representation to a dense representation. This is a big speed up for ops with lots of displacements. Fixed a bug in the three-q contract where the coefficients of the source op were not conjugated. Also, started to change the form of the operators (in this case baryon only) to only have "mom" and "t" as the explicit arguments during a construction. The "mom" might go away, but then again maybe not. The reason is multi-hadrons - need to create overall definite momentum states. Now pass around eigenvalues and smearing info as part of the operator. Will soon switch the mesons to this form as well as a dense rep. Also factored off some of the operator initialization and reading of metadata to common routines - cut down on code repetition. 2009-05-19 16:24 edwards * main/colorvec/Makefile.am: Added threequark_initialize_ops 2009-05-19 16:21 edwards * aclocal.m4, configure: Induced changes 2009-05-19 16:21 edwards * configure.ac: Changed to 2.15 2009-05-19 14:31 tag adat2-14-0 2009-05-19 14:31 edwards * aclocal.m4, configure: Induced changes 2009-05-19 14:30 edwards * configure.ac: Changed to 2.14.0 2009-05-19 14:30 edwards * NEWS: Info on 2.14.0 2009-05-19 11:50 dudek * lib/adat/ordered_map_obj.h: a wrapper over the std::map 2009-05-14 17:27 dudek * main/reconfit/: Makefile.am, reorder_spectrum.cpp: added reorder spectrum code 2009-05-14 15:33 dudek * main/reconfit/load_corrs_db.cpp: no direction averaging warning for A1 irreps now 2009-05-14 15:29 dudek * main/reconfit/fit_variational_real_db.cpp: false flag for reconPlots should now do what it is supposed to do 2009-05-12 16:15 dudek * main/reconfit/: covariance_new.cpp, fit_variational_real_db.cpp, fitiniexample.xml, fitinixml.cpp, fitinixml.h, jack_minuit.cpp, prin_corr.cpp, variational_real_db.cpp, variational_real_db.h: new options in the code: *flags in the ini file to tell the code what files to write out when it is done *a new reconstruction option ("fast") that does not include op-op covariance - this is not ideal but it is MUCH faster and tends to select the same t0 values - good fits seem to have this parameter below about 5 ? *improved prin corr fitting slightly and made the prin corr fits be normalised and have the mass displayed 2009-05-12 07:40 kostas * main/strippers/strip_hadspec.cc: added RAND wall source 2009-05-11 20:15 chen * other_libs/filedb/: aclocal.m4, configure: Minor change on Makefile 2009-05-11 20:14 chen * other_libs/filedb/filehash/: Makefile.am, tcheck.c, tdualwrite.c: Add a new debug code 2009-05-11 18:05 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3_axial.pl: Changed comment. 2009-05-11 18:01 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl: Added 9q machines. 2009-05-11 18:01 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3_axial.pl: Seems to work. 2009-05-11 17:49 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3_axial.pl: Axial from just 2 sources, no mom for now. 2009-05-11 17:43 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added axial genprop. 2009-05-11 17:40 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3_axial.pl: Compute only axial. 2009-05-08 13:38 chen * other_libs/filedb/filehash/tcheck.c: check whether key number is matching 2009-05-08 13:37 chen * other_libs/filedb/filehash/: ffdb_hash.c, ffdb_page.c, ffdb_pagepool.c, tread.c: Fix a major bug (not clean out moved page inside page pool cache) 2009-05-07 17:01 edwards * main/colorvec/scripts/run_baryon_2pt.pl: Updated. 2009-05-05 13:55 chen * other_libs/filedb/filehash/ffdb_hash.c: fix hdr->nkeys which over count when replace an existing keys 2009-05-05 11:27 thomasc * main/reconfit/: prin_corr.cpp, Makefile.am, covariance_new.cpp, fit_variational_real_db.cpp, load_corrs_db.cpp, new_ensem_matrix.cpp, variational_real_db.cpp: Major changes to output: less is written out to standard output. Eigenvalue and eigenvector reordering stuff written to "reorder_log", fitting principal correlators to "princorr_fit_log" and summary is still written out to "fit_log". When loading from database and rephasing now writes out operator phases to "ops_phases" file Automatic refvec choosing now trys something else if the first method fails (still experimental) Various bits of tidying up 2009-05-03 16:46 tag pre-adat2-14 2009-05-03 16:46 edwards * main/colorvec/threequark_contract_ops.cc: Added some debugging that prints the create and annih. spin indices. 2009-05-03 16:44 edwards * main/colorvec/threequark_operators.cc: Print out the spin_size in the pretty-print routine. 2009-05-03 16:44 edwards * main/colorvec/deriv_baryon_operators.cc: Lots of fixes. Seems to work for single sites. 2009-05-03 16:43 edwards * main/colorvec/: displace.cc, displace.h: Split the 3-q swap routines to a flavor and quark variant. Added canonical ordering (first version). Fixed the swap routines. 2009-05-02 00:10 edwards * main/colorvec/: simple_meson_operators.cc, simple_baryon_operators.cc: Changed convertSpin to convertTwoQuarkSpin. 2009-05-02 00:08 edwards * main/colorvec/: prop_obj.h, prop_obj.cc: Changed convertSpin to convertTwoQuarkSpin. Added a fake prop initializer for testing. 2009-05-02 00:07 edwards * main/colorvec/: deriv_meson_operators.h, deriv_meson_operators.cc, displace.cc, displace.h, genprop_obj.cc, irred_meson_operators.cc, irred_meson_operators.h, irreps.h, spin_rep.cc, spin_rep.h, threequark_operators.h, threequark_operators_factory.cc, twoquark_contract_ops.cc: Changed ListQuarkExpr to ListTwoQuarkExpr. New ListThreeQuarkExpr routines. Renamed the "convertSpin" to convertTwoQuarkSpin and convertThreeQuarkSpin. Split off the ThreeQuarkPath_t . 2009-05-02 00:02 edwards * main/colorvec/: Makefile.am, deriv_baryon_operators.cc, deriv_baryon_operators.h: Added deriv_baryon_operators. 2009-05-01 23:59 edwards * other_libs/xpath_reader/include/xml_array3d.h: Added a bunch of functions on Array3d. 2009-05-01 23:59 edwards * other_libs/xpath_reader/include/xml_array.h: Made "left hand side not initialized" error message a little more descriptive. 2009-05-01 23:54 tag adat2-13-0 2009-05-01 23:54 edwards * NEWS: Info on 2.13.0 2009-05-01 23:51 edwards * aclocal.m4, configure: Induced changes 2009-05-01 23:51 edwards * configure.ac: Changed to 2.13. 2009-05-01 14:03 jbulava * main/colorvec/: wick.cc, wick.h: Added xml output interface. Seems to work. 2009-05-01 13:29 jbulava * main/colorvec/: make_wick_input.rb, wick.cc, wick.h: Added more tests to input script, minor bug fixes 2009-04-29 16:52 edwards * main/colorvec/: irred_baryon_operators.h, irreps.h, simple_baryon_operators.cc, simple_baryon_operators.h, simple_meson_operators.h, threequark_operators.h, twoquark_operators.h: Moved into a single place the single/double cover irreps at rest. Could add little group versions as well. Added Parity() and Rep() functions to mesons and baryons. 2009-04-29 16:50 edwards * main/colorvec/: deriv_baryon_operators.cc, deriv_baryon_operators.h: Working on this. 2009-04-29 16:47 jbulava * main/colorvec/: make_wick_input.rb, wick.cc: Added xml input generating script 2009-04-29 16:18 jbulava * main/colorvec/wick.cc: Now it really compiles, I promise. 2009-04-29 16:03 jbulava * main/colorvec/: Makefile.am, wick.cc, wick.h: wickology should compile. Input script forthcoming 2009-04-29 12:44 edwards * main/colorvec/scripts/irrep.3deriv.list: Removed simple Gamma names since they are redundant. 2009-04-29 12:24 edwards * main/colorvec/scripts/irrep.3deriv.list: New list of all ops from simple_meson and deriv_meson including new 3-deriv beasties. 2009-04-29 12:21 edwards * main/colorvec/: deriv_meson_operators.h, irred_meson_operators.h, meson_2pt.cc, simple_meson_operators.h, twoquark_operators.h: Added a getRep() function. Now, the meson_2pt code prints out the J^PC of the states for convenience. 2009-04-28 14:53 jbulava * main/colorvec/: wick.cc, wick.h: First version at wick-o-matic by Ricky Wong. Does not compile yet. 2009-04-27 13:43 edwards * lib/adat/objfactory.h: Added a function to return all the keys of the factory. 2009-04-27 09:24 dudek * main/colorvec/deriv_meson_operators.cc: "fixed" phases of three-deriv ops - should give positive diagonals now 2009-04-27 00:38 edwards * main/colorvec/meson_2pt.3deriv.ini.xml: Changed to 10 vecs. 2009-04-27 00:00 edwards * main/colorvec/meson_2pt.3deriv.ini.xml: Fixed up some more 2009-04-26 22:52 edwards * main/colorvec/generate_all_ops.pl: Removed some spaces. 2009-04-26 16:09 edwards * main/colorvec/Makefile.am: Turned off threequark_initialize_ops.cc 2009-04-26 16:06 edwards * main/colorvec/Makefile.am: Added read_metadata.cc 2009-04-26 16:05 edwards * main/colorvec/: read_metadata.cc, read_metadata.h: Read eigenvalues. 2009-04-26 16:04 edwards * main/colorvec/: threequark_initialize_ops.cc, threequark_initialize_ops.h: Move some of the initialization code into a common piece. 2009-04-26 15:53 edwards * main/colorvec/: displace.cc, displace.h: Jo added three deriv tensors. 2009-04-26 15:53 edwards * main/colorvec/irred_meson_operators.h: Added default versions of new parity and charge conjugation functions. 2009-04-26 15:53 edwards * main/colorvec/twoquark_operators.h: Added representations and accessors for some properties. 2009-04-26 15:49 edwards * main/colorvec/Makefile.am: Added three_deriv_tensors. 2009-04-26 09:34 dudek * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, simple_meson_operators.cc, simple_meson_operators.h: new versions: deriv meson ops now organised differently - correlators same as previous up to signs operator objects now contain phase, parity, charge conj information three deriv ops present but untested 2009-04-26 09:30 dudek * main/colorvec/: three_deriv_tensors.cc, three_deriv_tensors.h: these versions compile, not yet checked for correctness 2009-04-26 09:28 dudek * other_libs/xpath_reader/include/xml_array4d.h: fixed some transcription errors 2009-04-25 23:48 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes 2009-04-25 23:48 edwards * other_libs/xpath_reader/include/Makefile.am: Added a 4d array. 2009-04-25 17:13 tag adat2-12-4 2009-04-25 17:13 edwards * NEWS: Info on adat2-12-4 2009-04-24 16:19 dudek * other_libs/xpath_reader/include/xml_array4d.h: Morphed a 3d array into a 4d array 2009-04-24 16:17 dudek * main/colorvec/: three_deriv_tensors.cc, three_deriv_tensors.h: New 3 deriv tensors. 2009-04-23 13:10 dudek * main/reconfit/fit_variational_real_db.cpp: fixed tmax transcripton error in chisq/ndof 2009-04-22 23:28 edwards * lib/adat/proginfo.cc: Fixed namespace name. 2009-04-22 23:27 edwards * lib/: Makefile.am, adat/proginfo.h, adat/proginfo.cc: Added proginfo. 2009-04-22 11:40 edwards * main/colorvec/threequark_contract_ops.cc: Added some more timings. 2009-04-22 10:50 tag qdp1-32-1 2009-04-22 10:50 bjoo * other_libs/filedb/: aclocal.m4, configure, filehash/Makefile.am, src/filedb_config_internal.h.in: Filehash -I issue changed 2009-04-21 15:48 bjoo * other_libs/filedb/: AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, aclocal.m4, configure, configure.ac, src/Makefile.am, src/filedb_config.h, src/filedb_config_internal.h.in: Did the config_internal.h.in dance 2009-04-21 15:38 bjoo * other_libs/xpath_reader/: aclocal.m4, configure, configure.ac, include/Makefile.am, include/xpath_reader_config.h, include/xpath_reader_config_internal.h.in: Did the config_internal.h.in dance 2009-04-21 14:52 chen * other_libs/filedb/src/: SConfReadTest.cpp, VFloatData.cpp: Minor change 2009-04-21 14:51 chen * other_libs/filedb/filehash/: Makefile.am, ffdb_hash.c, ffdb_hash.h, ffdb_page.c, ffdb_pagepool.c, tcreate.c, twrite.c: Fix bugs related to number of pages upon moving pages in addition to clean pages on disk when the pages has been moved 2009-04-20 10:57 tag c-lime1-3-2 2009-04-20 10:57 detar * other_libs/c-lime/: aclocal.m4, configure: tag c-lime1-3-2 2009-04-20 10:47 detar * other_libs/c-lime/configure.ac: Tag c-lime 1.3.2 2009-04-19 22:14 edwards * main/colorvec/: read_metadata.cc, read_metadata.h: Read db metadata and initialize a Layout struct. 2009-04-17 16:14 edwards * other_libs/filedb/: aclocal.m4, configure: Induced changes 2009-04-16 20:42 tag qdp1-32-0 2009-04-16 20:42 tag qdp1_31_2 2009-04-16 20:42 chen * other_libs/filedb/filehash/: ffdb_pagepool.c, ffdb_pagepool.h: add dump stack routine 2009-04-16 15:43 edwards * main/colorvec/ensem_filenames.cc: Added quark line to filename pattern in 3pt. 2009-04-16 14:30 edwards * main/colorvec/dbutil.cc: Fixed template parameters. 2009-04-15 23:49 edwards * main/colorvec/: baryon_3pt.cc, baryon_3pt.ini.xml: Changed to support insertion on any quark line. Also now has 3 quark masses. However, contractions in 2pt not changed yet. 2009-04-15 23:48 edwards * main/colorvec/baryon_elem_op.cc: Undid a commented print statement to see what the elementals look like. 2009-04-11 23:44 kostas * main/strippers/strip_hadspec.cc: added new sink 2009-04-11 00:06 kostas * lib/covfit/proplist.cc, main/strippers/strip_hadspec.cc: added new source to hadspec 2009-04-10 11:47 dudek * main/reconfit/: covariance_new.cpp, covariance_new.h, fit_variational_real_db.cpp, jack_minuit.cpp, load_corrs_db.cpp, prin_corr.cpp, variational_real_db.cpp, variational_real_db.h: major speed up - computing data covariance inverse only once for each t0 various tidy ups to the cout output new philosophy for tmax_fit, tmax_recon : reconstruction of corrs done up to tmax_fit tmax_recon now just the max tZ value to be tried 2009-04-09 00:30 edwards * main/colorvec/: all_dilutions.cc, all_dilutions.h, high_vecs_dilutions.cc, high_vecs_dilutions.h, no_dilutions.cc, no_dilutions.h, zN_rng.cc, zN_rng.h, dilutions.cc, dilutions.h, dilutions_factory.cc: New dilution support. 2009-04-03 22:35 edwards * main/sfpcac/run_tune/run_colorvec_prop_nf3.pl: Put in Neig_max. 2009-04-03 22:34 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3_8db.pl: Fixed array name for t_sources. 2009-04-03 22:34 edwards * main/sfpcac/run_tune/colorvec_work.pl: Put in Neig_max in more places. 2009-04-03 11:46 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: Added a 'uudOperator' source and sink to handle Colin's new coefficents for the nucleons and Deltas. 2009-04-03 00:21 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3_8db.pl: First version. 2009-03-28 22:18 tag adat2-12-3 2009-03-28 22:18 edwards * lib/adat/map_obj.h: Changed how insert is done on the map. Apparently, this last change would not overwrite an existing key/value. Changed back to using a find. If the key exists, then overwrite the existing value. 2009-03-27 15:10 thomasc * main/reconfit/: fit_variational_real_db.cpp, variational_real_db.cpp, variational_real_db.h: Bug fix in refvecs_fixed_auto mode. Warning: this mode is still experimental 2009-03-26 17:21 tag adat2-12-2 2009-03-26 17:21 edwards * NEWS, lib/adat/map_obj.h, lib/formfac/formfac_manage_2pt_key.cc, lib/formfac/formfac_manage_2pt_stripped.h, main/colorvec/baryon_elem_type.cc, main/colorvec/genprop_elem_type.cc, main/colorvec/meson_elem_type.cc, main/colorvec/prop_elem_type.cc, main/colorvec/threequark_dist_obj.h, main/colorvec/twoquark_dist_obj.h: Some more improvements on MapObject, trying to speed it up. Try to have less calls to "find". Removed use of OrderedMapTraits in cases where the key is only a string. 2009-03-26 10:51 tag adat2-12-1 2009-03-26 10:51 thomasc * main/reconfit/variational_real_db.cpp: Bug fix in fitPrinCorrs so fit results are stored correctly when this function is called more than once. (mass, mass2 and amp were already ok) 2009-03-25 09:26 thomasc * main/reconfit/: fit_variational_real_db.cpp, fitiniexample_ensem.xml, fitinixml.h: Implemented an experimental timeslice-by-timeslice ordering mode "refvecs_fixed_auto". This attempts to find a reasonable fixed reference timeslice close to t0. 2009-03-24 22:24 edwards * main/formfac/meson_3pt_fit_proj_snk.cc: Changed to using MapObject.keys() instead of dump(). 2009-03-24 22:15 edwards * NEWS, lib/adat/map_obj.h, main/colorvec/baryon_2pt.cc, main/colorvec/deriv_meson_operators.cc, main/colorvec/irred_baryon_operators.cc, main/colorvec/irred_meson_operators.cc, main/colorvec/meson_2pt.cc, main/colorvec/meson_4pt.cc: Changed around the MapObject yet again. Made it completely a string based critter. Does not used map_traits.h anymore. At this very moment, still uses tr1::unordered_map, but can easily switch back to std::map. 2009-03-23 23:06 thomasc * main/reconfit/load_corrs_db.cpp: Bug fix in folding in time reversal code. (Correlators on t > Lt/2 weren't correct) 2009-03-21 17:33 tag adat2-12-0 2009-03-21 17:33 edwards * NEWS, lib/adat/map_traits.cc, lib/adat/map_traits.h, lib/formfac/formfac_manage_2pt_key.cc, lib/formfac/formfac_manage_2pt_key.h, lib/formfac/formfac_manage_3pt_key.cc, lib/formfac/formfac_manage_3pt_key.h, lib/formfac/formfac_manage_E_key.cc, lib/formfac/formfac_manage_E_key.h, lib/formfac/formfac_manage_Z_key.cc, lib/formfac/formfac_manage_Z_key.h, lib/formfac/hadron_2pt_corr.cc, lib/formfac/hadron_2pt_corr.h, lib/formfac/hadron_3pt_corr.cc, lib/formfac/hadron_3pt_corr.h, main/colorvec/baryon_2pt_contract.cc, main/colorvec/baryon_2pt_contract.h, main/colorvec/baryon_elem_op.cc, main/colorvec/baryon_elem_type.cc, main/colorvec/baryon_elem_type.h, main/colorvec/meson_2pt_contract.cc, main/colorvec/meson_2pt_contract.h, main/colorvec/meson_4pt_contract.cc, main/colorvec/meson_4pt_contract.h, main/colorvec/meson_elem_type.cc, main/colorvec/meson_elem_type.h, main/colorvec/prop_elem_type.cc, main/colorvec/prop_elem_type.h, main/colorvec/threequark_contract_ops.cc, main/formfac/meson_3pt_fit_proj_snk.cc: Major bug fix in MapObject! It appears that we were getting effects using OpenMP with the keys for maps. The previous method used a "hash_value". It appears that when lots of mesons ops were constructed and held in a map, that the lookup or storage - not sure which - was fouled up by OpenMP. If I turned it off, the code was correct. This bizarre behavior was apparently always the case - back to adat2-0-0. The code worked correctly in OpenMP in pre-adat2-0. The major change was from stl::map to tr1::unordered_map. BTW, I was always suspicious my equivalence operator in MapTraits was not correct (the equivalence was after the hash - this could well be wrong - need it on the original data). 2009-03-21 17:26 edwards * aclocal.m4, configure: Induced changes 2009-03-21 17:26 edwards * lib/Makefile.am: Added map_traits.cc 2009-03-21 17:25 edwards * configure.ac: Changed to 2.12 2009-03-21 17:22 tag adat2-11-0 2009-03-21 17:22 edwards * NEWS: Info on 2.11 2009-03-21 17:20 edwards * aclocal.m4, configure: Induced changes 2009-03-21 17:20 edwards * configure.ac: Changed to 2.11 2009-03-20 16:49 jbulava * main/colorvec/: meson_4pt.cc, meson_meson_operators.cc, meson_meson_operators.h: Now correctly handles source momenta (needed a minus sign) 2009-03-20 15:32 jbulava * main/colorvec/: meson_4pt.cc, meson_4pt_contract.cc, meson_4pt_contract.h, meson_4pt_dispatch.cc, meson_4pt_dispatch.h, meson_meson_operators.cc, meson_meson_operators.h: Fixed to allow operators to have several terms, each with a different momentum 2009-03-19 15:49 edwards * main/colorvec/dbkeys.cc: Changed printKeys to only use "keys" instead of "keysAndData". Otherwise, it was slurping in all the keys & data, and then throwing it away just to print the keys. Now, just gets the keys. 2009-03-19 13:29 jbulava * main/colorvec/: baryon_2pt.cc, meson_2pt.cc, meson_4pt.cc, prop_obj.cc: added options so the mass_label 'U-0.084' will be found if 'U-0.0840' is input. 2009-03-16 16:55 thomasc * main/reconfit/: fit_variational_real_db.cpp, fitiniexample.xml, fitiniexample_ensem.xml, fitinixml.cpp, fitinixml.h, load_corrs_db.cpp, load_corrs_db.h, variational_real_db.cpp, variational_real_db.h: Vectors from a fixed timeslice can now be used as ref when ordering timeslice-by-timeslice. Modified xml input format for cfg-by-cfg and timeslice-by-timeslice ordering. Minor bug fixes. 2009-03-16 11:32 dudek * main/reconfit/: fit_variational_real_db.cpp, jack_minuit.cpp, plotter.cpp, plotter.h, variational_real_db.cpp: modified the plotting to print labels and more sensibly set axis limits 2009-03-15 14:37 edwards * main/colorvec/scripts/run_meson_2pt_1mm_irrep.pl: Fixed how the looping is done. 2009-03-14 16:09 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_prop_nf3.pl: Added erase prop and a erase eigcg. 2009-03-14 14:23 edwards * main/sfpcac/run_tune/run_colorvec_prop_nf3.pl: Made the t_sources and array. 2009-03-14 14:10 edwards * main/colorvec/scripts/run_meson_2pt_1mm_irrep.pl: Loop over dilutions & num_vecs. Put in shortcuts for which directions to compute. 2009-03-14 14:10 edwards * main/colorvec/scripts/colorvec_scripts.pl: Got rid of find_file_sdb. 2009-03-14 11:41 edwards * other_libs/filedb/filehash/ffdb_hash.c: Turned off some debugging output. 2009-03-12 23:07 edwards * lib/adat/map_obj.h: Added a clear() and erase() function. 2009-03-12 16:30 edwards * main/colorvec/scripts/run_meson_2pt_1mm_irrep.pl: Loop over dilutions. 2009-03-12 15:07 edwards * main/colorvec/scripts/run_meson_2pt_1mm_irrep.pl: First test for dilution-distillation. 2009-03-12 15:06 edwards * main/colorvec/scripts/irrep.1mm.list: Just 1-- and 0-+ ops. 2009-03-12 14:17 edwards * main/colorvec/scripts/: extract_all_irrep.pl, file_test.pl, run_baryon_2pt.pl, run_meson_2pt_all_irrep.pl, run_meson_2pt_all_irrep_diag.pl, run_meson_2pt_all_ops.pl, run_meson_2pt_mom.pl, run_meson_3pt.pl, run_meson_3pt_irrep_sink.pl: Changes for new keys. 2009-03-12 14:14 edwards * main/colorvec/scripts/colorvec_scripts.pl: Removed non-functional baryon code. Changed DB to be using new file format. 2009-03-12 14:11 edwards * main/sfpcac/run_tune/: run_colorvec_baryon_nf3.pl, run_colorvec_genprop_nf3.pl, run_colorvec_genprop_nf3_2db.pl, run_colorvec_meson_nf3.pl, run_colorvec_prop_nf3.pl: Changed to use new DB format with extensions "sdb". 2009-03-12 12:01 thomasc * main/reconfit/: fit_variational_real_db.cpp, fitiniexample.xml, fitiniexample_ensem.xml, fitinixml.cpp, fitinixml.h, load_corrs_db.cpp, load_corrs_db.h, variational_real_db.cpp, variational_real_db.h: Added support for new database format (filedb) Removed support for old database format (ffdb-lite) Now performs global reordering of spectrum before producing plots and ensem files to match ascending order of extracted effective masses Minor improvements and bug fix 2009-03-11 21:11 jbulava * main/colorvec/: meson_4pt.cc, meson_4pt_contract.cc, meson_4pt_contract.h, meson_4pt_dispatch.cc, meson_4pt_dispatch.h, meson_meson_operators.h: meson_4pt now also output the 2pt correlators, as they are calculated anyway. 2009-03-11 09:56 edwards * other_libs/filedb/src/ConfDataStoreDB.h: Changed default cache size back to 8192 2009-03-11 01:40 jbulava * main/colorvec/: meson_4pt.cc, meson_meson_operators.cc, meson_meson_operators.h: Fixed getName bug 2009-03-11 01:20 jbulava * main/colorvec/meson_4pt_contract.cc: Added other (trivial) term to the correlator. 2009-03-11 01:07 jbulava * main/colorvec/: meson_4pt.cc, meson_meson_operators.h: Compiles and runs to produce sensible looking output. Must add non-butterfly diagram and test. 2009-03-11 00:57 edwards * main/colorvec/: no_dilutions.cc, dilutions.cc, dilutions.h, dilutions_factory.cc, dilutions_factory.h, no_dilutions.h: First versions of dilution support. 2009-03-10 20:06 jbulava * main/colorvec/: Makefile.am, meson_4pt.cc, meson_4pt_contract.cc, meson_4pt_contract.h, meson_meson_operators.cc, meson_meson_operators.h: This version compiles, have yet to try running. 2009-03-10 18:14 jbulava * main/colorvec/: meson_4pt.cc, meson_4pt_dispatch.cc, meson_4pt_dispatch.h, meson_meson_operators.cc, meson_meson_operators.h: More stuff for meson_4pt 2009-03-10 09:53 tag adat2-10-2 2009-03-10 09:53 edwards * NEWS: Info on 2.10.1 2009-03-09 23:59 tag adat2-10-1 2009-03-09 23:59 edwards * main/colorvec/convert_db.csh: Simple script for converting dbs from the old to new format. 2009-03-09 20:39 jbulava * main/colorvec/: meson_4pt_contract.cc, meson_4pt_contract.h: Contraction for 4 point correlators 2009-03-09 19:58 jbulava * main/colorvec/: meson_4pt.cc, meson_4pt_dispatch.cc, meson_4pt_dispatch.h: added dispatch routines 2009-03-09 19:53 jbulava * main/colorvec/meson_4pt.cc: John and Jimmy's first attempt at pi-pi 2009-03-09 13:45 edwards * main/colorvec/convert_read.cc: Comment out printing of metadata. 2009-03-09 13:28 edwards * main/colorvec/: dbconvert_read.cc, dbconvert_write.cc: Turned off printing of metadata. 2009-03-09 13:11 edwards * main/colorvec/dbutil.cc: Put back in missing include headers. 2009-03-09 13:02 edwards * main/colorvec/: Makefile.am, dbkeys.cc, dbmeta.cc, dbutil.cc: Added dbmeta - print just the metadata. Also added this to dbutil functionality. 2009-03-09 11:34 edwards * lib/io/adat_io.cc: Changed the readDesc to use an assign. 2009-03-09 11:33 edwards * main/colorvec/: dbconvert_read.cc, dbconvert_write.cc: Fixes, now works for 2pt and 3pt. 2009-03-08 23:59 edwards * main/colorvec/convert_read.cc: Properly try to deal with metadata. 2009-03-08 23:59 edwards * lib/io/: adat_xmlio.cc, adat_xmlio.h: Added printCurrentContext in XMLReader. 2009-03-08 22:41 edwards * lib/formfac/formfac_manage_3pt_db.h, lib/formfac/hadron_2pt_corr.h, lib/formfac/hadron_3pt_corr.h, lib/io/key_val_db.h, lib/io/old_key_val_db.h, main/colorvec/baryon_elem_op.h, main/colorvec/convert_read.cc, main/colorvec/convert_write.cc, main/colorvec/dbkeys.cc, main/colorvec/dbmerge.cc, main/colorvec/dbtype.cc, main/colorvec/dbutil.cc, main/colorvec/genprop_obj.h, main/colorvec/meson_elem_op.h, main/colorvec/prop_obj.h: Changed file paths of filedb and ffdb-lite to be under control of AM_CXXFLAGS. Now, a default path. 2009-03-08 22:40 edwards * lib/Makefile.am, main/colorvec/Makefile.am, main/formfac/Makefile.am, main/reconfit/Makefile.am, main/strippers/Makefile.am: Changed AM_CXXFLAGS path for include of filedb. 2009-03-08 22:15 edwards * main/colorvec/Makefile.am: Changed the build of dbconvert_{read,write} to a bin_PROGRAMS. 2009-03-08 22:06 edwards * main/colorvec/: Makefile.am, baryon_2pt_dispatch.cc, baryon_elem_op.cc, baryon_elem_op.h, baryon_elem_type.cc, baryon_elem_type.h, convert_read.cc, convert_read.h, convert_write.cc, convert_write.h, dbconvert.cc, dbconvert_read.cc, dbconvert_write.cc, dbtype.cc, genprop_elem_type.cc, genprop_elem_type.h, genprop_obj.cc, genprop_obj.h, meson_2pt_dispatch.cc, meson_elem_op.cc, meson_elem_op.h, meson_elem_type.cc, meson_elem_type.h, prop_elem_type.cc, prop_elem_type.h, prop_obj.cc, prop_obj.h: Split apart the actual key/val reading/writing of the elementals from the rest of the stuff, like the maps, etc. First working version of the dbconvert_read and write. 2009-03-08 22:05 edwards * lib/io/: adat_io.cc, adat_io.h: Added a descriptor version of a reader and writer for strings which writes the length first then exactly the whole array - not relying on newlines or nulls. I debated this at the beginning of qdp++, but was hesitant to go against established C tradition of writing null array terminated strings. Too bad, because the established tradition is horrible. 2009-03-06 23:16 edwards * main/colorvec/: Makefile.am, convert_read.cc, convert_read.h, convert_write.cc, convert_write.h, dbconvert.cc: Split off the reading and writing to separate modules. 2009-03-06 22:47 edwards * main/colorvec/dbconvert.cc: First version, but is not working. 2009-03-06 15:54 thomasc * main/colorvec/: baryon_elem_op.h, dbkeys.cc, dbutil.cc, genprop_obj.h, meson_elem_op.h, prop_obj.h: Made FILEDB namespace explicit 2009-03-06 15:53 thomasc * lib/: formfac/formfac_manage_3pt_db.h, formfac/hadron_2pt_corr.h, formfac/hadron_3pt_corr.h, io/key_val_db.h: Made FILEDB namespace explicit CiVS: 2009-03-06 11:54 thomasc * lib/formfac/: hadron_2pt_corr.cc, hadron_2pt_corr.h: Added functions to convert from old format keys to new format keys and vice-versa 2009-03-06 00:14 edwards * main/colorvec/prop_obj.cc: Changed the binary order of spin_l and spin_r to agree with the inline_prop_matelem_colorvec conventions in chroma. 2009-03-05 23:34 tag adat2-10-0 2009-03-05 23:34 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, baryon_3pt.cc, baryon_3pt.ini.xml, baryon_elem_op.cc, baryon_elem_op.h, dbconvert.cc, dbkeys.cc, dbmerge.cc, deriv_meson_operators.cc, deriv_meson_operators.h, genprop_obj.cc, genprop_obj.h, irred_baryon_operators.cc, irred_baryon_operators.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, meson_2pt.ini.xml, meson_3pt.cc, meson_3pt.ini.xml, meson_elem_op.cc, meson_elem_op.h, op_params.cc, op_params.h, prop_obj.cc, prop_obj.h, simple_baryon_operators.cc, simple_baryon_operators.h, simple_meson_operators.cc, simple_meson_operators.h, threequark_contract_ops.cc, threequark_dist_obj.cc, threequark_dist_obj.h, threequark_operators.cc, threequark_operators.h, twoquark_contract_ops.cc, twoquark_dist_obj.cc, twoquark_dist_obj.h, twoquark_operators.cc, twoquark_operators.h: Like Briagdoon, the blocking code appeared and now has disappeared. Restored code to original chain of colorvec_matelem tasks in chroma. No blocking. However, the nifty cool data structures holding the Two and Three quark representations are still there. This simplifies the contraction codes. Resorted back to the simple keys I originally had. I removed the displacement_length from the meson and baryon elem keys. It's wrong to have that as a key, because a zero displacement was now disp_len dependent. Instead, if one wants a long line of displacements, then make it so as part of the disp path array. 2009-03-05 23:28 edwards * aclocal.m4, configure: Induced changes 2009-03-05 23:28 edwards * NEWS: Info on 2.10 2009-03-05 23:26 edwards * configure.ac: Changed to 2.10 2009-03-05 16:30 tag adat2-9-2 2009-03-05 16:30 thomasc * main/reconfit/Makefile.am: Changed include and library paths to support old and new database formats 2009-03-05 16:29 thomasc * lib/formfac/: hadron_2pt_corr.cc, hadron_2pt_corr.h: Added an old version of the key which does not read/write the smearing labels (bug compatible with old version of database) 2009-03-05 15:55 edwards * lib/: Makefile.am, io/old_key_val_db.h: Added old_key_val.h 2009-03-05 15:33 tag qdp1-31-1 2009-03-05 15:33 chen * other_libs/filedb/filehash/ffdb_page.c: release bucket page too early fixed 2009-03-05 08:01 tag adat2-9-1 2009-03-05 08:01 edwards * NEWS: Info on 2.9.0 2009-03-05 01:24 edwards * main/colorvec/: dbtype.cc, dbtype.h: Pulled out function to return the dbtype. 2009-03-04 23:23 tag adat2-9-0 2009-03-04 23:23 edwards * lib/formfac/formfac_manage_3pt_db.cc, lib/formfac/formfac_manage_3pt_db.h, lib/formfac/hadron_2pt_corr.cc, lib/formfac/hadron_2pt_corr.h, lib/formfac/hadron_3pt_corr.h, lib/io/key_val_db.h, main/colorvec/baryon_2pt.cc, main/colorvec/baryon_2pt.ini.xml, main/colorvec/baryon_3pt.cc, main/colorvec/baryon_3pt.ini.xml, main/colorvec/baryon_elem_op.cc, main/colorvec/baryon_elem_op.h, main/colorvec/blocks.cc, main/colorvec/blocks.h, main/colorvec/dbconvert.cc, main/colorvec/dbkeys.cc, main/colorvec/dbmerge.cc, main/colorvec/dbutil.cc, main/colorvec/deriv_baryon_operators.cc, main/colorvec/deriv_baryon_operators.h, main/colorvec/deriv_meson_operators.cc, main/colorvec/deriv_meson_operators.h, main/colorvec/genprop_obj.cc, main/colorvec/genprop_obj.h, main/colorvec/irred_baryon_operators.cc, main/colorvec/irred_baryon_operators.h, main/colorvec/irred_meson_operators.cc, main/colorvec/irred_meson_operators.h, main/colorvec/meson_2pt.cc, main/colorvec/meson_2pt.ini.xml, main/colorvec/meson_3pt.cc, main/colorvec/meson_3pt.ini.xml, main/colorvec/meson_elem_op.cc, main/colorvec/meson_elem_op.h, main/colorvec/old_format.cc, main/colorvec/old_format.h, main/colorvec/op_params.cc, main/colorvec/op_params.h, main/colorvec/prop_obj.cc, main/colorvec/prop_obj.h, main/colorvec/simple_baryon_operators.cc, main/colorvec/simple_baryon_operators.h, main/colorvec/simple_meson_operators.cc, main/colorvec/simple_meson_operators.h, main/colorvec/threequark_contract_ops.cc, main/colorvec/threequark_dist_obj.cc, main/colorvec/threequark_dist_obj.h, main/colorvec/threequark_operators.cc, main/colorvec/threequark_operators.h, main/colorvec/twoquark_contract_ops.cc, main/colorvec/twoquark_dist_obj.cc, main/colorvec/twoquark_dist_obj.h, main/colorvec/twoquark_operators.cc, main/colorvec/twoquark_operators.h: Removed support for ffdb-lite. Now, only directly support the new filedb. This is a single file implementation of a DB courtesy of Jie Chen. Only single files - no more 3 files. Chroma has been changed to only output this new format. The old format is broken. There is a start at a dbconvert that will convert the old format to the new format. However, the colorvec code has also been changed to support blocking, and that's the version that is being used from chroma at this moment. However, I want to dump blocking - wrong way to go. So, rather than support all that baggage, I'll rip out the blocking support - not hard. Then, the file conversion from Chroma will be pretty straightforward, but tedious. Did lots of cleanups in baryon contractions. Switched to a smart array container to hold temporaries. Start at a derivatve baryon code - not ready yet. Lots of other cleanups. 2009-03-04 23:19 edwards * other_libs/xpath_reader/include/xml_array.h: Added support for more binary operations on an Array. 2009-03-04 23:17 edwards * lib/Makefile.am, main/colorvec/Makefile.am, main/formfac/Makefile.am, main/strippers/Makefile.am, other_libs/Makefile.am: Turned off support for ffdb-lite. Now, switched to filedb. No more Berkeley DB. File format now incompatible from before, however. 2009-03-04 23:16 edwards * aclocal.m4, configure: Induced changes 2009-03-04 23:16 edwards * configure.ac: Changed to 2.9 2009-03-04 23:11 tag adat2-8-0 2009-03-04 23:11 edwards * NEWS: Info on 2.8 2009-03-04 23:09 edwards * aclocal.m4, configure: Induced changes 2009-03-04 23:08 edwards * configure.ac: Changed to 2.8 2009-03-04 19:41 tag qdp1-31-0 2009-03-04 19:41 edwards * other_libs/filedb/aclocal.m4: Induce changes. 2009-03-04 19:40 edwards * other_libs/filedb/aclocal.m4: Induced changes. 2009-03-04 19:40 edwards * other_libs/filedb/src/: DBCursor.h, DBFunc.h, DBKey.h: Changed include path of filehash files back to no relative path. 2009-03-04 14:31 chen * other_libs/filedb/src/ConfDataStoreDB.h: Change to 16384 default pagesize 2009-03-04 14:15 edwards * other_libs/filedb/src/ConfDataStoreDB.h: Changed include guard to avoid collisions with ffdb-lite. 2009-03-04 14:13 edwards * other_libs/filedb/src/: ConfDataStoreDB.h, DBCursor.h, DBData.h, DBFunc.h, DBKey.h, VFloatData.h: Changed some include guards and paths to filehash to be relative. 2009-03-04 14:12 edwards * other_libs/filedb/filehash/: ffdb_db.h, ffdb_hash.c: Renamed DB_HASH and __db to avoid name collisions with Berkeley DB. 2009-03-04 14:08 tag qdp1-30-1 2009-03-04 14:08 edwards * other_libs/ffdb-lite/src/DBCursor.h: Changed include slightly. 2009-03-04 13:03 chen * other_libs/filedb/filehash/ffdb_hash.c: Add flush disk when doubling 2009-03-04 12:08 edwards * other_libs/filedb/src/AllConfStoreDB.h: Changed include of FFDB.h to FileDB.h 2009-03-04 10:56 chen * other_libs/filedb/src/: FileDB.cpp, FileDB.h: Add FileDB 2009-03-04 10:55 chen * other_libs/filedb/: configure, configure.ac, filehash/Makefile.am, src/AllConfCreateTest.cpp, src/AllConfReadTest.cpp, src/AllConfStoreDB.cpp, src/AllConfStoreDB.h, src/AllConfUpdateTest.cpp, src/ConfCreateTest.cpp, src/ConfDataDBMerger.cpp, src/ConfDataDBMerger.h, src/ConfDataStoreDB.cpp, src/ConfDataStoreDB.h, src/ConfReadTest.cpp, src/ConfigInfo.cpp, src/ConfigInfo.h, src/DBCursor.cpp, src/DBCursor.h, src/DBData.h, src/DBFunc.cpp, src/DBFunc.h, src/DBKey.h, src/DBMergeTest.cpp, src/DBString.cpp, src/DBString.h, src/FFDB.cpp, src/FFDB.h, src/HashFunc.cpp, src/HashFunc.h, src/Makefile.am, src/SConfCreateTest.cpp, src/SConfReadTest.cpp, src/Serializable.h, src/VFloatData.cpp, src/VFloatData.h: Change Namespace from FFDB to FILEDB 2009-03-04 00:56 tag qio2-3-8 2009-03-04 00:56 osborn * other_libs/c-lime/: aclocal.m4, configure: Made it so that the "clear to send" messages are still sent when HAVE_BGL is defined. 2009-03-03 20:44 chen * other_libs/filedb/filehash/: ffdb_pagepool.c, ffdb_pagepool.h: Combine multiple writes 2009-03-03 11:18 thomasc * main/reconfit/: load_corrs_db.cpp, load_corrs_db.h, new_ensem_matrix.cpp, new_ensem_matrix.h, variational_real_db.cpp, variational_real_db.h: Modified fit_variational_real_db: Now reads in from either database or ensem files Can now sort eigenvectors and eigenvalues timeslice by timeslice and/or cfg by cfg (with better cfg by cfg resigning) See fitinixml.h, fitiniexample.xml and fitiniexample_ensem for input parameters 2009-03-03 11:12 thomasc * main/reconfit/: Makefile.am, fit_variational_real_db.cpp, fitiniexample.xml, fitiniexample_ensem.xml, fitinixml.cpp, fitinixml.h: Modified fit_variational_real_db: Now reads in from either database or ensem files Can now sort eigenvectors and eigenvalues timeslice by timeslice and/or cfg by cfg (with better cfg by cfg resigning) 2009-03-02 18:58 chen * other_libs/filedb/: filehash/ffdb_db.h, filehash/ffdb_page.c, src/DBFunc.h, src/SConfReadTest.cpp: Change implementation on keys iterator which get keys only 2009-03-02 18:27 chen * other_libs/filedb/: filehash/ffdb_hash.c, src/AllConfStoreDB.h, src/ConfDataDBMerger.cpp, src/ConfDataDBMerger.h, src/DBMergeTest.cpp, src/Makefile.am, src/SConfCreateTest.cpp, src/SConfReadTest.cpp, src/VFloatData.cpp, src/VFloatData.h: Test DBMerge Code 2009-03-01 17:28 edwards * other_libs/filedb/src/ConfDataStoreDB.h: Bug fix. Changed the "close" member function to actually return something since it is declared an int. 2009-03-01 13:01 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Added qmt version for qcd7ni02 2009-03-01 12:18 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Added qcd7ni02 to run lists. 2009-03-01 12:15 edwards * main/sfpcac/run_tune/colorvec_work.pl: Fixed block prop name. 2009-03-01 11:53 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added blocking routines. 2009-03-01 11:27 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3_2db.pl: Multiple dbs 2009-03-01 11:27 edwards * main/sfpcac/run_tune/run_colorvec_prop_block.pl: Block version. 2009-03-01 11:26 edwards * main/sfpcac/run_tune/run_hmc.pl: Removed tmp_out 2009-03-01 11:25 edwards * main/sfpcac/run_tune/run_colorvec_prop_nf3.pl: Fixed printing of origin for debugging. 2009-02-28 20:03 chen * other_libs/filedb/src/AllConfCreateTest.cpp: Add missing O_CREAT flag 2009-02-28 16:08 edwards * other_libs/filedb/src/DBFunc.cpp: Removed debugging comment. 2009-02-28 16:05 edwards * other_libs/filedb/src/DBFunc.cpp: Put in a try/catch within binaryAllPairs. 2009-02-28 16:03 edwards * other_libs/filedb/src/ConfDataDBMerger.h: Rerranged some code in merge. Declare objects when they are used. 2009-02-28 15:45 edwards * other_libs/filedb/src/ConfDataStoreDB.h: Bug fix. Changed the arguments to binaryKeysAndData to use a reference so data can be returned. 2009-02-27 11:15 chen * other_libs/filedb/src/DBFunc.cpp: Fix missing FFDB_KEY_CURSOR 2009-02-26 22:37 edwards * other_libs/filedb/src/: AllConfStoreDB.h, ConfDataStoreDB.h: Moved the "exist" function from AllConfStore to the base class ConfDataStore 2009-02-26 15:22 edwards * other_libs/filedb/src/DBFunc.cpp: Changed an error message to show the correct function name - binaryAllPairs. 2009-02-26 11:46 edwards * main/colorvec/meson_2pt.ini.xml: Added irred meson operator. 2009-02-25 13:16 edwards * other_libs/filedb/src/ConfDataStoreDB.h: Add 1 to user data length to account for null terminators. 2009-02-25 13:16 edwards * other_libs/filedb/src/ConfCreateTest.cpp: Changed userdata to go through a string. 2009-02-25 10:49 edwards * other_libs/filedb/src/ConfDataStoreDB.h: Changed insertUserdata to take a const string. 2009-02-24 16:43 chen * other_libs/filedb/src/ConfCreateTest.cpp: Add O_CREAT 2009-02-23 23:25 edwards * other_libs/filedb/filehash/ffdb_pagepool.c: Check if O_LARGEFILE is defined before attempting to add it to the lflags used in the "open" call. 2009-02-23 23:22 edwards * other_libs/filedb/src/ConfigInfo.cpp: Added include of time.h 2009-02-23 09:01 dudek * main/reconfit/sum_of_exp.cpp: fixed the fit_corr fitter to not fail when corrs are negative 2009-02-20 15:44 chen * other_libs/filedb/: AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, aclocal.m4, configure, configure.ac, config/config.guess, config/config.sub, config/depcomp, config/install-sh, config/missing, filehash/Makefile.am, filehash/createStrings.c, filehash/ffdb_cq.h, filehash/ffdb_db.c, filehash/ffdb_db.h, filehash/ffdb_hash.c, filehash/ffdb_hash.h, filehash/ffdb_hash_func.c, filehash/ffdb_hash_func.h, filehash/ffdb_page.c, filehash/ffdb_page.h, filehash/ffdb_pagepool.c, filehash/ffdb_pagepool.h, filehash/replaceStrings.c, filehash/tcreate.c, filehash/tkeyseq.c, filehash/todolist, filehash/tread-th.c, filehash/tread.c, filehash/treplace.c, src/AllConfCreateTest.cpp, src/AllConfReadTest.cpp, src/AllConfStoreDB.cpp, src/AllConfStoreDB.h, src/AllConfUpdateTest.cpp, src/ConfCreateTest.cpp, src/ConfDataDBMerger.cpp, src/ConfDataDBMerger.h, src/ConfDataStoreDB.cpp, src/ConfDataStoreDB.h, src/ConfReadTest.cpp, src/ConfigInfo.cpp, src/ConfigInfo.h, src/DBCursor.cpp, src/DBCursor.h, src/DBData.h, src/DBFunc.cpp, src/DBFunc.h, src/DBKey.h, src/DBString.cpp, src/DBString.h, src/FFDB.cpp, src/FFDB.h, src/HashFunc.cpp, src/HashFunc.h, src/Makefile.am, src/Serializable.h: initial import 2009-02-20 15:12 dudek * main/reconfit/prin_corr.cpp: fixed another dumb bug in prin corr that caused it to fail for short fitting ranges 2009-02-20 10:24 edwards * main/colorvec/: baryon_2pt_dispatch.cc, meson_2pt_dispatch.cc: Fixed OMP usage. 2009-02-19 23:56 tag adat2-7-0 2009-02-19 23:56 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, baryon_2pt_contract.cc, baryon_2pt_contract.h, baryon_2pt_dispatch.cc, baryon_2pt_dispatch.h, baryon_3pt.cc, baryon_elem_op.cc, baryon_elem_op.h, deriv_meson_operators.cc, deriv_meson_operators.h, ensem_filenames.cc, ensem_filenames.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, meson_2pt.ini.xml, meson_2pt_contract.cc, meson_2pt_contract.h, meson_2pt_dispatch.cc, meson_2pt_dispatch.h, meson_3pt.cc, simple_meson_operators.cc, simple_meson_operators.h, threequark_contract_ops.cc, threequark_operators.cc, threequark_operators.h, twoquark_operators.cc, twoquark_operators.h: Overhaul of codes. In an effort to simplify the codes, the ability to run over an array of num_vecs is now removed - it complicated the code. Removed select_vecs. Pulled "t0" loop out to the driver codes. Now, the meson_2pt_contract and the baryon_2pt_contract are much simpler. Fixed up the way the MapBaryonElementalOperator worked. Now, it's not a MapObject anymore. Instead, the "get" function is passed the "sigma" for smearing on the fly. The constructor for the baryon elemental maps holds the eigenvalues and num_vecs. Introduced a MomList - an array of momenta - for the meson and baryon 2pt codes. Changed the input files to match this new feature. The loops over the source and sink ops is simplified as well. 2009-02-19 23:50 edwards * aclocal.m4, configure: Induced changes 2009-02-19 23:50 edwards * configure.ac: Changed to 2.7 2009-02-19 23:47 tag adat2-6-0 2009-02-19 23:47 edwards * NEWS: Info on 2.6 2009-02-19 23:45 edwards * aclocal.m4, configure: Induced changes 2009-02-19 23:45 edwards * configure.ac: Changed to 2.6 2009-02-19 16:21 dudek * main/reconfit/sum_of_exp.cpp: fixed silly bug 2009-02-19 11:01 edwards * main/colorvec/meson_2pt.cc: Fixed bin_crr 2009-02-19 10:56 edwards * main/colorvec/: baryon_2pt.cc, baryon_3pt.cc, meson_2pt.cc, meson_3pt.cc: Put in averaging over the number of t0 (num_t0). 2009-02-18 17:59 dudek * main/reconfit/sum_of_exp.cpp: added a fit killer if the amplitude of the second exponential is hugely larger than the first 2009-02-18 17:45 dudek * main/reconfit/: Makefile.am, fit_corr.cpp, sum_of_exp.cpp, sum_of_exp.h: added clone of prin_corr to fit single correlators with one or two exponentials executable is fit_corr 2009-02-18 15:30 edwards * main/sfpcac/run_tune/run_colorvec_prop_nf3.pl: Put in a print statement for the origin. 2009-02-18 15:29 edwards * main/sfpcac/run_tune/: run_colorvec_genprop_nf3.pl, colorvec_work.pl: Support momentum averaging. 2009-02-18 13:57 dudek * main/reconfit/: Makefile.am, fit_const.cpp: added simple exec to fit a time-dep ensem to a constant value 2009-02-18 13:05 dudek * main/reconfit/INSTALL_HINTS: Some hints to help get the codes in this directory to install by including itpp libraries 2009-02-18 10:11 thomasc * main/reconfit/: Makefile.am, fit_variational_real_db.cpp, fitiniexample.xml, load_corrs_db.cpp, load_corrs_db.h, variational_real_db.cpp, variational_real_db.h: Created modified version of fit_variational_real: fit_variational_real_db This reads in correlators from a database instead of ensemble files and uses an xml file for paramters (see fitiniexample.xml) 2009-02-15 13:01 edwards * main/colorvec/: baryon_2pt_dispatch.cc, baryon_3pt.cc, meson_2pt_dispatch.cc, meson_3pt.cc: Bug fixes in the handling of the time slice wrapping around the boundary. 2009-02-14 22:06 tag adat2-5-0 2009-02-14 22:06 edwards * NEWS: Info on 2.5 2009-02-14 22:03 edwards * main/reconfit/Makefile.am: Removed some commented out code and some spaces causing automake to complain. 2009-02-14 22:02 edwards * aclocal.m4, configure: Induced changes 2009-02-14 22:01 edwards * configure.ac: Changed to 2.5 2009-02-14 21:58 edwards * main/colorvec/baryon_2pt.ini.xml: Removed spurious mom2_max. 2009-02-10 16:07 edwards * main/colorvec/: baryon_2pt.ini.xml, simple_baryon_operators.cc, simple_baryon_operators.h: Added a Delta operator. 2009-02-10 15:33 edwards * main/colorvec/scripts/run_baryon_2pt.pl: New input format. 2009-02-10 15:33 edwards * main/colorvec/scripts/colorvec_scripts.pl: Put in explicit names of dbs. 2009-02-10 15:32 edwards * main/colorvec/scripts/run_meson_3pt_irrep_sink.pl: New form of input and ffs to contract. 2009-02-10 15:31 edwards * main/colorvec/irred_baryon_operators.cc: Put back in the changes to force irrep_row to be input. 2009-02-09 23:11 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: Added support for the deltas. Still performing comparisons with the point to all but initial results look pretty good. 2009-02-06 14:49 edwards * main/colorvec/: baryon_elem_op.h, threequark_contract_ops.cc, threequark_dist_obj.cc, threequark_dist_obj.h: Changed to using a unordered_map for the Array - the spin index portion of the generic distilled object. This will save space. 2009-02-06 14:48 edwards * main/colorvec/baryon_2pt.ini.xml: Turn on off-diagonals. 2009-02-05 16:29 dudek * main/reconfit/: Makefile.am, covariance_new.cpp, covariance_new.h, fit_variational_real.cpp, jack_minuit.cpp, jack_minuit.h, prin_corr.cpp, prin_corr.h, variational_real.cpp, variational_real.h: changed the recon fit code to use the ROOT::Minuit2 interface the principal correlator fitting should be a little more reliable now too slight speed-up in the reconstruction by not recomputing a covariance 2009-02-05 16:16 edwards * main/colorvec/etensor.cc: Fixed comments of Q' to agree with code. 2009-02-04 16:49 edwards * main/colorvec/baryon_3pt.ini.xml: Changed spin component to 1-based. 2009-02-04 16:48 edwards * main/colorvec/: baryon_2pt.ini.xml, ensem_filenames.cc, irred_baryon_operators.cc, simple_baryon_operators.cc: Added spin components and smearing names in ensemble files. Changed spin_comp and irrep_row to be 1-based. 2009-02-04 16:34 edwards * main/colorvec/: baryon_2pt.ini.xml, irred_baryon_operators.cc, irred_baryon_operators.h: Added reading of irrep_row to the group theory operators. 2009-02-04 15:07 edwards * main/sfpcac/run_tune/colorvec_work.pl: Changed to use a restricted plateau within genprop. No mom. averaging yet, though. 2009-02-03 15:54 tag FFDB-0-9-2 2009-02-03 15:54 edwards * other_libs/ffdb-lite/: aclocal.m4, configure: Induced changes 2009-02-03 15:53 edwards * other_libs/ffdb-lite/configure.ac: Changed to 0.92 2009-02-03 15:42 edwards * main/colorvec/: baryon_2pt.cc, baryon_3pt.cc, dbkeys.cc, dbmerge.cc, dbutil.cc, genprop_obj.cc, irred_baryon_operators.cc, meson_2pt.cc, meson_3pt.cc, prop_obj.cc: Switched to new constructors for DB routines. Now pass in an "open_flags", the cache and page size. 2009-02-03 15:41 edwards * lib/formfac/formfac_manage_3pt_db.cc: Now pass in open_flags, and cache and page size to ConfigInfoManager. 2009-02-03 15:40 edwards * other_libs/ffdb-lite/src/: AllConfStoreDB.h, ConfDataDBMerger.h, ConfDataStoreDB.h, ConfFxDSizeStoreDB.h, ConfVarDSizeStoreDB.h, ConfigInfoManager.cpp, ConfigInfoManager.h, DBFunc.cpp, DBFunc.h: Changed interface for DB routines. Now must set the cachesize and pagesize. Must also pass in an "open_flags" that is DB_RDONLY or DB_CREATE. Fixed memory leak from MALLOC (needed by threaded reads). 2009-02-03 10:07 tag FFDB-0-9-1 2009-02-03 10:07 edwards * other_libs/ffdb-lite/: aclocal.m4, configure: Induced changes 2009-02-03 10:06 edwards * other_libs/ffdb-lite/configure.ac: Changed to 0.91 2009-02-02 10:22 jbulava * lib/io/adat_io.h: Fixed binary writer for Array3d 2009-02-01 23:09 tag adat2-4-0 2009-02-01 23:09 edwards * NEWS: Info on 2.4 2009-02-01 23:07 edwards * aclocal.m4, configure: Induced changes 2009-02-01 23:07 edwards * configure.ac: Changed to 2.4 2009-02-01 17:59 edwards * main/colorvec/: baryon_2pt_contract.cc, threequark_contract_ops.cc: Extended sparsity optimization of source spin indices to all 3 indices. 2009-02-01 17:46 edwards * main/colorvec/: baryon_2pt_contract.cc, threequark_contract_ops.cc, threequark_contract_ops.h: Changed to a sparse matrix construction for the source/create op indices. Only the (Ls,Ms) (left & middle barred indices) are handled at the moment. The code searches for all the corresponding source ops that will multiply this combo of Sink*Peram*Peram*Peram and find all the source op indices that will contribute, instead of doing a dense multiplication over all 4^3 indices. 2009-01-31 22:00 tag adat2-3-0 2009-01-31 22:00 edwards * NEWS: Info on 2.3 2009-01-31 21:56 edwards * configure: Induced changes 2009-01-31 21:52 edwards * aclocal.m4: Induced changes 2009-01-31 21:52 edwards * configure.ac: Changed to 2.3 2009-01-31 18:18 edwards * main/colorvec/: baryon_3pt.cc, baryon_3pt.ini.xml, genprop_obj.cc, genprop_obj.h, meson_3pt.cc, meson_3pt.ini.xml, threequark_operators.h: Now support restricted range for the plateaus. Also, support the genprops averaged over equivalent rotations. Rearranged the t0 loop (t_i,t_f pairs) to be just below the gamma loop. The point is the restricted range of a plateau does not allow all t-slices in a chunk to go into every correlator. So, will redo the contractions for each pair. 2009-01-31 18:14 edwards * main/colorvec/: mom_conv.cc, mom_conv.h: Moved definitions off to cc file. 2009-01-31 15:47 edwards * main/colorvec/: baryon_elem_op.h, baryon_elem_op.cc: Moved map constructor code to the cc file. 2009-01-29 23:46 tag adat2-2-0 2009-01-29 23:46 edwards * NEWS: Info on 2.2 2009-01-29 23:44 edwards * aclocal.m4, configure: Induced changes 2009-01-29 23:44 edwards * configure.ac: Changed to 2.2 2009-01-29 15:20 edwards * main/colorvec/contract_opt.cc: Small bug fix in the matrix multiplyRep. It has not been used, so no biggy. 2009-01-29 14:58 edwards * main/colorvec/threequark_contract_ops.cc: Further optimization. Made a temporary (must have it) for the last contraction that will be weighted by the spin. The final reweighting can be done in a simple scalar multiply onto a tensor and accumulate onto the final tensor. 2009-01-29 14:57 edwards * main/colorvec/: contract_opt.cc, contract_opt.h: Added multiplyRep and multiplySub. 2009-01-29 09:17 edwards * lib/adat/funcmap.h: Added disambiguator argument for FunctionMap. 2009-01-28 11:26 edwards * main/colorvec/baryon_2pt.cc: Small changes. 2009-01-28 11:18 edwards * main/colorvec/dbkeys.cc: Switched to using a function map. Id of available function types will get dumped if input type is not found. 2009-01-28 09:55 edwards * main/colorvec/baryon_2pt_contract.cc: Removed some more of the older (commented-out code). 2009-01-28 09:52 edwards * main/colorvec/: baryon_2pt_contract.cc, threequark_contract_ops.cc: Cleaned out commented code. 2009-01-28 09:42 tag adat2-1-0 2009-01-28 09:42 edwards * NEWS: Info on 2.1 2009-01-28 09:39 edwards * aclocal.m4, configure: Induced changes 2009-01-28 09:38 edwards * configure.ac: Changed to 2.1 2009-01-25 15:07 tag qdp1-30-0 2009-01-25 15:07 edwards * other_libs/ffdb-lite/src/DBFunc.h: Ooops, fixed that last commit. 2009-01-25 15:05 edwards * main/colorvec/baryon_2pt_contract.cc, main/colorvec/baryon_elem_op.h, main/colorvec/threequark_contract_ops.cc, main/colorvec/threequark_operators.h, other_libs/ffdb-lite/src/DBFunc.cpp: Some indenting. 2009-01-25 15:05 edwards * main/colorvec/scripts/colorvec_scripts.pl: Added generic baryon writer for xml input. 2009-01-22 23:09 kostas * lib/covfit/: function_switchboard.cc, fitters/exponaper_bar.h: new fit function 2009-01-15 21:59 jbulava * other_libs/ffdb-lite/src/: DBFunc.cpp, DBFunc.h: Added threading capability. 2009-01-15 21:58 jbulava * main/colorvec/threequark_contract_ops.cc: added some timings 2009-01-15 00:20 jbulava * main/colorvec/: baryon_2pt.cc, baryon_2pt_contract.cc, threequark_contract_ops.cc: Modification to threequark_contract_ops. Runs 2.5 times slower (!) for some reason, but uses half the memory. Work in progress. 2009-01-11 13:09 kostas * lib/covfit/jackknife.h: added arbitrary distance effective mass 2009-01-11 12:43 jbulava * main/colorvec/dbkeys.cc: Now spits out the possible db types on error. 2009-01-11 11:30 kostas * main/utils/eff_mass.cc: added arbitrary distance effective mass 2009-01-10 14:15 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added canonical order. 2009-01-10 14:15 edwards * main/sfpcac/run_tune/canorder.pl: Canonical order of an array. 2009-01-09 15:24 jbulava * main/colorvec/baryon_3pt.cc: Induced change, because of the new map 2009-01-08 17:00 jbulava * main/colorvec/: baryon_elem_op.cc, threequark_contract_ops.cc: Fixed segfault. Stupidity on my part. 2009-01-08 13:55 jbulava * main/colorvec/: baryon_2pt.cc, baryon_elem_op.cc, baryon_elem_op.h, irred_baryon_operators.cc, threequark_contract_ops.cc, threequark_operators.cc, threequark_operators.h: Modifications to the elemental op map. Pretty much nothing is stored right now. Another optimization to come. 2009-01-03 01:17 edwards * main/colorvec/scripts/run_meson_3pt_irrep_sink.pl: Pushed work into a run_job. Now have source irreps and a sink irrep. 2009-01-03 01:17 edwards * main/colorvec/scripts/colorvec_scripts.pl: Added a print statement in find_file to see what's happening. 2009-01-03 00:20 edwards * main/colorvec/scripts/run_meson_3pt_irrep_sink.pl: Build up irrep at sink and local ops at source. 2009-01-02 13:54 edwards * main/colorvec/irred_baryon_operators.cc: Made creation of parameters into a dummy argument. 2009-01-02 13:51 edwards * main/colorvec/irred_baryon_operators.cc: Removed some unused functions. 2009-01-01 23:10 edwards * main/colorvec/irred_baryon_operators.cc: Some more indenting. 2009-01-01 23:10 edwards * main/colorvec/baryon_2pt.ini.xml: Removed spuriou @vecs from input. The "vecs" is not being used, so leave it empty. 2009-01-01 23:00 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, baryon_2pt_contract.cc, baryon_elem_op.cc, baryon_elem_op.h: Did a bunch of indenting. 2009-01-01 23:00 edwards * main/colorvec/: dbkeys.cc, dbutil.cc: Changed number on argc before a usage is spit out. 2008-12-17 08:59 jbulava * main/colorvec/baryon_2pt.ini.xml: Added irreducible ops to the input file 2008-12-12 10:35 jbulava * main/colorvec/: baryon_2pt_contract.cc, threequark_contract_ops.cc: Another optimization: don't bother with the 132 term. The 123 term now contains both terms. 2008-12-10 23:05 jbulava * main/colorvec/: baryon_2pt.cc, baryon_elem_op.cc, threequark_operators.cc: Re-enabled select_vecs. Didn't break the current input files, added a version 3. 2008-12-10 22:15 jbulava * main/colorvec/: baryon_elem_op.cc, baryon_elem_op.h, threequark_operators.cc: Added more functionality to the MapBaryonElementalOperator. It's pretty sloppy but it works for now. 2008-12-07 13:32 jbulava * main/colorvec/baryon_2pt_contract.cc: If not making off diags, only the sink temps for the current ops are calculated to same memory. 2008-12-06 12:16 edwards * main/colorvec/scripts/run_meson_2pt_all_irrep_diag.pl: Does only the diagonal directions (same source and sink directions). 2008-12-05 13:00 edwards * main/colorvec/scripts/extract_all_irrep.pl: Fixed up for new key format. 2008-12-05 12:53 edwards * main/colorvec/: baryon_3pt.ini.xml, meson_2pt.ini.xml, meson_3pt.ini.xml: Removed unused output info for 3pt. Changed 2pt to only use the db. 2008-12-05 12:53 edwards * main/colorvec/scripts/run_meson_2pt_all_irrep.pl: Changed to version for input. 2008-12-05 00:08 edwards * main/formfac/meson_3pt_fit_proj_snk.cc: Simple fixes. 2008-12-05 00:06 edwards * main/strippers/Makefile.am: Fixed up the compiler flags. 2008-12-04 23:52 tag adat2-0-0 2008-12-04 23:52 edwards * lib/formfac/: formfac_manage_E_key.cc, formfac_manage_E_stripped.cc, formfac_manage_Z_key.cc, formfac_manage_Z_stripped.cc: New manager objects. 2008-12-04 23:48 edwards * main/sfpcac/run_tune/colorvec_work.pl: Removed wildcard in find_file. 2008-12-04 23:43 edwards * AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, acinclude.m4, aclocal.m4, adat-config.in, configure, config/depcomp, config/install-sh, config/missing, config/mkinstalldirs, docs/adat_threept_api.tex, docs/building_block_sizes.tex, docs/jackknife.tex, lib/adat/adat_stopwatch.cc, lib/adat/adat_stopwatch.h, lib/adat/funcmap.h, lib/adat/handle.h, lib/adat/map_obj.h, lib/adat/map_traits.h, lib/adat/objfactory.h, lib/adat/objfunctor.h, lib/adat/singleton.h, lib/adat/typeinfo.h, lib/adat/typelist.h, lib/adat/typemanip.h, lib/adat/typetraits.h, lib/covfit/BaseFitter.cc, lib/covfit/CovarMat.cc, lib/covfit/FitParams_io.cc, lib/covfit/FitParams_io.h, lib/covfit/Fitter.cc, lib/covfit/FpiParams_io.cc, lib/covfit/FpiParams_io.h, lib/covfit/Function.h, lib/covfit/adat_lapack.h, lib/covfit/coFitter.cc, lib/covfit/covarmat.h, lib/covfit/fitter.h, lib/covfit/function_switchboard.cc, lib/covfit/jackknife.h, lib/covfit/lapack_wrapper.h, lib/covfit/proplist.cc, lib/covfit/proplist.h, lib/covfit/statistics.h, lib/covfit/fitters/BaryonFfunc.h, lib/covfit/fitters/BaryonSfunc.h, lib/covfit/fitters/Lookup.h, lib/covfit/fitters/chiPT_fKofPi.h, lib/covfit/fitters/chiPT_mKomPi.h, lib/covfit/fitters/chiPTfp.h, lib/covfit/fitters/chiPTgA.h, lib/covfit/fitters/chiPTlog.h, lib/covfit/fitters/expon.h, lib/covfit/fitters/expon_altern.h, lib/covfit/fitters/exponaper.h, lib/covfit/fitters/exponaper_bar.h, lib/covfit/fitters/exponper.h, lib/covfit/fitters/exponper_altern.h, lib/covfit/fitters/exponper_altern_onemass.h, lib/covfit/fitters/exponper_subtr.h, lib/covfit/fitters/fitfunctions.h, lib/covfit/fitters/gAJfunc.h, lib/covfit/fitters/gAKfunc.h, lib/covfit/fitters/polynomium.h, lib/ensem/ensem.h, lib/ensem/ensem_ensem.h, lib/ensem/ensem_forward.h, lib/ensem/ensem_io.cc, lib/ensem/ensem_io.h, lib/ensem/ensem_newops.h, lib/ensem/ensem_obsantisym.h, lib/ensem/ensem_observable.h, lib/ensem/ensem_obsmatrix.h, lib/ensem/ensem_obsscalar.h, lib/ensem/ensem_obstensor.h, lib/ensem/ensem_obsvector.h, lib/ensem/ensem_operator_tags.h, lib/ensem/ensem_params.h, lib/ensem/ensem_precision.h, lib/ensem/ensem_primgamma.h, lib/ensem/ensem_primitive.h, lib/ensem/ensem_primmatrix.h, lib/ensem/ensem_primscalar.h, lib/ensem/ensem_primseed.h, lib/ensem/ensem_primspinmat.h, lib/ensem/ensem_primspinvec.h, lib/ensem/ensem_primvector.h, lib/ensem/ensem_random.cc, lib/ensem/ensem_random.h, lib/ensem/ensem_reality.h, lib/ensem/ensem_scalar_specific.h, lib/ensem/ensem_scalarsite_defs.h, lib/ensem/ensem_simpleword.h, lib/ensem/ensem_specializations.h, lib/ensem/ensem_stopwatch.h, lib/ensem/ensem_traits.h, lib/ensem/ensem_type_computations.h, lib/ensem/ensem_xmlio.cc, lib/formfac/formfac.h, lib/formfac/formfac_bb.cc, lib/formfac/formfac_bb.h, lib/formfac/formfac_chisqq.cc, lib/formfac/formfac_chisqq.h, lib/formfac/formfac_data_covar.cc, lib/formfac/formfac_data_covar.h, lib/formfac/formfac_ensem_linfit.cc, lib/formfac/formfac_ensem_linfit.h, lib/formfac/formfac_ensemble.cc, lib/formfac/formfac_ensemble.h, lib/formfac/formfac_linear_covar_genfit.cc, lib/formfac/formfac_linear_covar_genfit.h, lib/formfac/formfac_manage.cc, lib/formfac/formfac_manage.h, lib/formfac/formfac_manage_2pt.cc, lib/formfac/formfac_manage_2pt.h, lib/formfac/formfac_manage_2pt_key.cc, lib/formfac/formfac_manage_2pt_key.h, lib/formfac/formfac_manage_2pt_stripped.cc, lib/formfac/formfac_manage_2pt_stripped.h, lib/formfac/formfac_manage_3pt.cc, lib/formfac/formfac_manage_3pt.h, lib/formfac/formfac_manage_3pt_bb.cc, lib/formfac/formfac_manage_3pt_bb.h, lib/formfac/formfac_manage_3pt_cache.cc, lib/formfac/formfac_manage_3pt_cache.h, lib/formfac/formfac_manage_3pt_db.cc, lib/formfac/formfac_manage_3pt_db.h, lib/formfac/formfac_manage_3pt_key.cc, lib/formfac/formfac_manage_3pt_key.h, lib/formfac/formfac_manage_3pt_stripped.cc, lib/formfac/formfac_manage_3pt_stripped.h, lib/formfac/formfac_manage_E.cc, lib/formfac/formfac_manage_E.h, lib/formfac/formfac_manage_E_key.h, lib/formfac/formfac_manage_E_stripped.h, lib/formfac/formfac_manage_Z.cc, lib/formfac/formfac_manage_Z.h, lib/formfac/formfac_manage_Z_key.h, lib/formfac/formfac_manage_Z_stripped.h, lib/formfac/formfac_manage_aggregate.cc, lib/formfac/formfac_manage_aggregate.h, lib/formfac/formfac_manage_factory.h, lib/formfac/formfac_manage_npr.h, lib/formfac/formfac_manage_state.h, lib/formfac/formfac_meson_fit.cc, lib/formfac/formfac_meson_fit.h, lib/formfac/formfac_operators.cc, lib/formfac/formfac_operators.h, lib/formfac/formfac_operators_factory.h, lib/formfac/formfac_qsq.cc, lib/formfac/formfac_qsq.h, lib/formfac/formfac_solver.cc, lib/formfac/formfac_solver.h, lib/formfac/formfac_solver_driver.cc, lib/formfac/formfac_solver_driver.h, lib/formfac/formfac_solver_row.cc, lib/formfac/formfac_solver_row.h, lib/formfac/formfac_state.h, lib/formfac/formfac_util.cc, lib/formfac/formfac_util.h, lib/formfac/hadron_2pt_corr.cc, lib/formfac/hadron_2pt_corr.h, lib/formfac/hadron_3pt_corr.cc, lib/formfac/hadron_3pt_corr.h, lib/io/adat_byteorder.cc, lib/io/adat_byteorder.h, lib/io/adat_crc32.cc, lib/io/adat_io.cc, lib/io/adat_io.h, lib/io/adat_qdpio.cc, lib/io/adat_qdpio.h, lib/io/adat_util.h, lib/io/adat_xml_group_reader.cc, lib/io/adat_xml_group_reader.h, lib/io/adat_xmlio.cc, lib/io/adat_xmlio.h, lib/io/key_val_db.h, lib/parton/parton_correlation_functions.h, lib/parton/parton_correlation_functions_1.cc, lib/parton/parton_correlation_functions_2.cc, lib/parton/parton_derivatives.cc, lib/parton/parton_derivatives.h, lib/parton/parton_distribution_moments.cc, lib/parton/parton_distribution_moments.h, lib/parton/parton_renormalization_factors.cc, lib/parton/parton_renormalization_factors.h, lib/recipes/brent.cc, lib/recipes/gammln.cc, lib/recipes/gammp.cc, lib/recipes/gammq.cc, lib/recipes/gcf.cc, lib/recipes/gser.cc, lib/recipes/mnewt.cc, lib/recipes/nr.h, lib/recipes/nrtypes.h, lib/recipes/nrtypes_nr.h, lib/recipes/nrutil.h, lib/recipes/nrutil_nr.h, lib/recipes/print_array.h, lib/recipes/pythag.cc, lib/recipes/spline.cc, lib/recipes/splint.cc, lib/recipes/svbksb.cc, lib/recipes/svdcmp.cc, lib/recipes/svdfit.cc, lib/recipes/svdvar.cc, main/Makefile.am, main/BuildingBlocks/readme, main/baryon_analysis/Makefile.am, main/baryon_analysis/allocate.cc, main/baryon_analysis/baryon_analysis.cc, main/baryon_analysis/baryon_functions.h, main/baryon_analysis/baryons.h, main/baryon_analysis/compute_group_corrs.cc, main/baryon_analysis/compute_ukqcd_corrs.cc, main/baryon_analysis/gamma.cc, main/baryon_analysis/gamma.h, main/baryon_analysis/ops.h, main/baryon_analysis/qqq_io.cc, main/baryon_analysis/read_group_tables.cc, main/baryon_analysis/strip_io.cc, main/baryon_analysis/swap.cc, main/baryons/Makefile.am, main/baryons/arrays.h, main/baryons/compute_corrs.cc, main/baryons/compute_corrs.h, main/baryons/correlate.cc, main/baryons/correlate.h, main/baryons/elemental_ops.cc, main/baryons/elemental_ops.h, main/baryons/globals.h, main/baryons/in.dat, main/baryons/iohelp.cc, main/baryons/iohelp.h, main/baryons/projections.cc, main/baryons/projections.h, main/baryons/qqq_prop.cc, main/baryons/qqq_prop.h, main/baryons/read_qqq_prop.cc, main/baryons/read_qqq_prop.h, main/baryons/ttt.cc, main/colorvec/1mm.ini.xml, main/colorvec/antisymtensor.cc, main/colorvec/antisymtensor.h, main/colorvec/avg_pol.pl, main/colorvec/baryon_2pt.cc, main/colorvec/baryon_2pt.ini.xml, main/colorvec/baryon_2pt_contract.cc, main/colorvec/baryon_2pt_contract.h, main/colorvec/baryon_2pt_dispatch.cc, main/colorvec/baryon_2pt_dispatch.h, main/colorvec/baryon_3pt.cc, main/colorvec/baryon_3pt.ini.xml, main/colorvec/baryon_elem_op.cc, main/colorvec/baryon_elem_op.h, main/colorvec/contract_opt.cc, main/colorvec/contract_opt.h, main/colorvec/dbkeys.cc, main/colorvec/dbmerge.cc, main/colorvec/dbutil.cc, main/colorvec/deriv_meson_operators.cc, main/colorvec/deriv_meson_operators.h, main/colorvec/diractodr.cc, main/colorvec/diractodr.h, main/colorvec/displace.cc, main/colorvec/displace.h, main/colorvec/ensem_filenames.cc, main/colorvec/ensem_filenames.h, main/colorvec/etensor.cc, main/colorvec/etensor.h, main/colorvec/generate_all_ops.pl, main/colorvec/genprop_obj.cc, main/colorvec/genprop_obj.h, main/colorvec/irred_baryon_operators.cc, main/colorvec/irred_baryon_operators.h, main/colorvec/irred_meson_operators.cc, main/colorvec/irred_meson_operators.h, main/colorvec/make_adat_baryon_input.pl, main/colorvec/make_irred_meson_input.pl, main/colorvec/meson_2pt.cc, main/colorvec/meson_2pt.ini.xml, main/colorvec/meson_2pt_contract.cc, main/colorvec/meson_2pt_contract.h, main/colorvec/meson_2pt_dispatch.cc, main/colorvec/meson_2pt_dispatch.h, main/colorvec/meson_3pt.cc, main/colorvec/meson_3pt.ini.xml, main/colorvec/meson_elem_op.cc, main/colorvec/meson_elem_op.h, main/colorvec/mink_phase.cc, main/colorvec/mink_phase.h, main/colorvec/mom_conv.cc, main/colorvec/mom_conv.h, main/colorvec/op.list, main/colorvec/op_params.cc, main/colorvec/op_params.h, main/colorvec/prop_obj.cc, main/colorvec/prop_obj.h, main/colorvec/rtensor.cc, main/colorvec/rtensor.h, main/colorvec/simple_baryon_operators.cc, main/colorvec/simple_baryon_operators.h, main/colorvec/simple_meson_operators.cc, main/colorvec/simple_meson_operators.h, main/colorvec/spin_rep.cc, main/colorvec/spin_rep.h, main/colorvec/symtensor.cc, main/colorvec/symtensor.h, main/colorvec/threequark_contract_ops.cc, main/colorvec/threequark_contract_ops.h, main/colorvec/threequark_dist_obj.cc, main/colorvec/threequark_dist_obj.h, main/colorvec/threequark_operators.cc, main/colorvec/threequark_operators.h, main/colorvec/threequark_operators_factory.cc, main/colorvec/threequark_operators_factory.h, main/colorvec/ttensor.cc, main/colorvec/ttensor.h, main/colorvec/twoquark_contract_ops.cc, main/colorvec/twoquark_contract_ops.h, main/colorvec/twoquark_dist_obj.cc, main/colorvec/twoquark_dist_obj.h, main/colorvec/twoquark_operators.cc, main/colorvec/twoquark_operators.h, main/colorvec/twoquark_operators_factory.cc, main/colorvec/twoquark_operators_factory.h, main/colorvec/scripts/colorvec_scripts.pl, main/colorvec/scripts/extract_all_irrep.pl, main/colorvec/scripts/file_test.pl, main/colorvec/scripts/irrep.list, main/colorvec/scripts/irrep.mixed.list, main/colorvec/scripts/run_baryon_2pt.pl, main/colorvec/scripts/run_meson_2pt_all_irrep.pl, main/colorvec/scripts/run_meson_2pt_all_ops.pl, main/colorvec/scripts/run_meson_2pt_mom.pl, main/colorvec/scripts/run_meson_3pt.pl, main/ensem/Makefile.am, main/ensem/calc.cc, main/ensem/calcc.cc, main/ensem/hadspec.lime, main/ensem/meff.cc, main/ensem/t_qio.cc, main/ensem/test.cc, main/ensem/test2.cc, main/fitters/Makefile.am, main/fitters/cofit.cc, main/fitters/covarprop.cc, main/fitters/fit.cc, main/fitters/readcovp.cc, main/formfac/a0_2photon.axis2.xsl, main/formfac/a0_2photon.cc, main/formfac/a0_2photon.ini.xml, main/formfac/a0_photon_fit.cc, main/formfac/a0_photon_fit_cons.cc, main/formfac/baryon_matrix_elems.h, main/formfac/build_cache.cc, main/formfac/build_cache.ini.xml, main/formfac/build_currents.cc, main/formfac/build_currents.ini.xml, main/formfac/build_derivatives.cc, main/formfac/build_derivatives.ini.xml, main/formfac/complex_eigen_inverse.cc, main/formfac/current_ops.cc, main/formfac/current_ops.h, main/formfac/current_ops_factory.h, main/formfac/eigen_inverse.cc, main/formfac/ensem_matrix_elems.h, main/formfac/extract_Z_rho_mom, main/formfac/extract_matrix_Z, main/formfac/extract_matvec_Z, main/formfac/file_test.cc, main/formfac/file_test.ini.xml, main/formfac/make_mom_list.cc, main/formfac/matrix_elems.cc, main/formfac/matrix_elems.h, main/formfac/matrix_elems_factory.h, main/formfac/meson_3pt_fit_proj_snk.cc, main/formfac/meson_fit.cc, main/formfac/meson_insertion_ops.cc, main/formfac/meson_insertion_ops.h, main/formfac/meson_matrix_elems.cc, main/formfac/meson_matrix_elems.h, main/formfac/nucleon_ff.cc, main/formfac/nucleon_ff.ini.xml, main/formfac/operators.cc, main/formfac/operators.h, main/formfac/operators_factory.h, main/formfac/pion_2photon.axis2.xsl, main/formfac/pion_2photon.cc, main/formfac/pion_2photon.ini.xml, main/formfac/pion_photon_fit.cc, main/formfac/test_manage.cc, main/formfac/thin_bb.cc, main/formfac/wavefuncs.cc, main/formfac/wavefuncs.h, main/fpi/Makefile.am, main/fpi/calc_fpi.cc, main/fpi/fpi_db.xml, main/mres/Makefile.am, main/mres/calc_Za.cc, main/mres/mres.cc, main/mres_calc_exercise/DATA, main/mres_calc_exercise/Makefile.am, main/mres_calc_exercise/eigHwM1.8.0656.xml, main/mres_calc_exercise/eig_err.cc, main/mres_calc_exercise/zolotarev.h, main/mres_calc_exercise/zolotarev_coeffs.cc, main/qqbar/Makefile.am, main/qqbar/arrays.h, main/qqbar/compute_corrs.cc, main/qqbar/compute_corrs.h, main/qqbar/corr_info.cc, main/qqbar/corr_info.h, main/qqbar/iohelp.cc, main/qqbar/iohelp.h, main/qqbar/qqbar.cc, main/qqbar/qqbar.ini.xml, main/qqbar/qqbar_props.cc, main/qqbar/qqbar_props.h, main/qqbar/test_corr_info.cc, main/qqbar/test_qqbar_props.cc, main/reconfit/Makefile.am, main/reconfit/covariance_new.cpp, main/reconfit/covariance_new.h, main/reconfit/fit_variational_real.cpp, main/reconfit/jack_minuit.cpp, main/reconfit/jack_minuit.h, main/reconfit/load_corrs.h, main/reconfit/new_ensem_matrix.cpp, main/reconfit/new_ensem_matrix.h, main/reconfit/plotter.cpp, main/reconfit/plotter.h, main/reconfit/prin_corr.cpp, main/reconfit/prin_corr.h, main/reconfit/variational_real.cpp, main/reconfit/variational_real.h, main/sfpcac/Makefile.am, main/sfpcac/accprob.xsl, main/sfpcac/autocorr.pl, main/sfpcac/chisqq.cc, main/sfpcac/chisqq.h, main/sfpcac/constfit.cc, main/sfpcac/constfit.h, main/sfpcac/crude_pcac_spacing_extract.pl, main/sfpcac/crude_pcac_spacing_pion_extract.pl, main/sfpcac/crude_pcac_spacing_pion_extract_dir_non.pl, main/sfpcac/cubefit_driver.cc, main/sfpcac/disp_xi_f.cc, main/sfpcac/extract_deltaM.pl, main/sfpcac/extract_pcac.pl, main/sfpcac/extract_pcac_mixed.pl, main/sfpcac/extract_pion.pl, main/sfpcac/extract_pion_rho.pl, main/sfpcac/extract_pion_sq.pl, main/sfpcac/extract_r0.pl, main/sfpcac/extract_r0_mixed.pl, main/sfpcac/extract_rho.pl, main/sfpcac/extract_xi_f.pl, main/sfpcac/extract_xi_g.pl, main/sfpcac/filter_qpot.csh, main/sfpcac/filter_qpot_Q.csh, main/sfpcac/fit_pcac_pion.pl, main/sfpcac/hypercubefit.cc, main/sfpcac/hypercubefit.h, main/sfpcac/linefit.cc, main/sfpcac/linefit.h, main/sfpcac/make_disp_xi_f.pl, main/sfpcac/make_qpot.csh, main/sfpcac/make_qpot_spacing.pl, main/sfpcac/matrix_solver.cc, main/sfpcac/pion_mass_extract.pl, main/sfpcac/planefit.cc, main/sfpcac/planefit.h, main/sfpcac/planefit_driver.cc, main/sfpcac/q_mass.h, main/sfpcac/q_mass_dm.cc, main/sfpcac/qpot.ini.xml, main/sfpcac/qpot_chisq.cc, main/sfpcac/qpot_chisq.h, main/sfpcac/qpot_eff.cc, main/sfpcac/qpot_exp_fit.cc, main/sfpcac/qpot_exp_fit.h, main/sfpcac/qpot_exp_fit_params.cc, main/sfpcac/qpot_exp_fit_params.h, main/sfpcac/qpot_fit.cc, main/sfpcac/qpot_fit.ini.xml, main/sfpcac/rebalance.cc, main/sfpcac/rebuild_xi_g.pl, main/sfpcac/rescale_var.pl, main/sfpcac/sf.cube_fit.ini.xml, main/sfpcac/sf.ini.xml, main/sfpcac/sf_cube_fit_mass_nu_xi.cc, main/sfpcac/sf_cube_fit_mass_nu_xi.deviates.pretty.csh, main/sfpcac/sf_cube_fit_mass_nu_xi.deviates.xsl, main/sfpcac/sf_cube_fit_mass_nu_xi.math.xsl, main/sfpcac/sf_cube_fit_mass_nu_xi.phys.xsl, main/sfpcac/sf_cube_fit_mass_nu_xi.pretty.csh, main/sfpcac/sf_cube_fit_mass_nu_xi.print.xsl, main/sfpcac/sf_line_fit_csw.axis.xsl, main/sfpcac/sf_line_fit_csw.cc, main/sfpcac/sf_plane_fit_fixed_mass.cubefit.pl, main/sfpcac/sf_plane_fit_fixed_mass.planefit.pl, main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.intersect.pl, main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.joint.bare.plot.pl, main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.joint.pl, main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl, main/sfpcac/sf_plane_fit_mass_csw.axis.xsl, main/sfpcac/sf_plane_fit_mass_csw.axis2.xsl, main/sfpcac/sf_plane_fit_mass_csw.cc, main/sfpcac/sf_plane_fit_mass_csw.grace1.xsl, main/sfpcac/sf_plane_fit_mass_csw.grace2.xsl, main/sfpcac/sf_plane_fit_mass_nu.cc, main/sfpcac/sf_plane_fit_mass_nu.deviates.pretty.csh, main/sfpcac/sf_plane_fit_mass_nu.deviates.xsl, main/sfpcac/sf_plane_fit_mass_nu.make_plots.csh, main/sfpcac/sf_plane_fit_mass_nu.math.joint.compare.xi.csh, main/sfpcac/sf_plane_fit_mass_nu.plot.grace1.pl, main/sfpcac/sf_plane_fit_mass_nu.space.joint.compare.m.csh, main/sfpcac/sf_plane_fit_mass_nu.space.joint.pl, main/sfpcac/sf_plane_fit_mass_nu.time.joint.compare.m.csh, main/sfpcac/sf_plane_fit_mass_nu.time.joint.pl, main/sfpcac/sf_plane_fit_mass_xi.axis1.xsl, main/sfpcac/sf_plane_fit_mass_xi.axis2.xsl, main/sfpcac/sf_plane_fit_mass_xi.cc, main/sfpcac/sf_plane_fit_mass_xi.grace1.xsl, main/sfpcac/sf_plane_fit_mass_xi.grace2.xsl, main/sfpcac/sf_reader.cc, main/sfpcac/sf_reader.h, main/sfpcac/sf_single_mass.cc, main/sfpcac/sf_uncorr_mass_list_analyze.cc, main/sfpcac/sub_extract_deltaM.pl, main/sfpcac/sub_extract_pcac.pl, main/sfpcac/sub_extract_pcac_mixed.pl, main/sfpcac/sub_extract_pion.pl, main/sfpcac/sub_extract_pion_rho.pl, main/sfpcac/sub_extract_pion_sq.pl, main/sfpcac/sub_extract_r0.pl, main/sfpcac/sub_extract_r0_mixed.pl, main/sfpcac/sub_extract_rho.pl, main/sfpcac/sub_extract_xi_f.pl, main/sfpcac/sub_extract_xi_g.pl, main/sfpcac/sub_rebuild_var.pl, main/sfpcac/wilslp.ini.xml, main/sfpcac/wilslp_Vt.axis.xsl, main/sfpcac/wilslp_ratio.cc, main/sfpcac/wilslp_reader.cc, main/sfpcac/wilslp_reader.h, main/sfpcac/xi_chisq.cc, main/sfpcac/xi_chisq.h, main/sfpcac/xi_extract.pl, main/sfpcac/run_tune/Z.csh, main/sfpcac/run_tune/Z_A.xsl, main/sfpcac/run_tune/Z_V.xsl, main/sfpcac/run_tune/acc.xsl, main/sfpcac/run_tune/build_chroma_xml.csh, main/sfpcac/run_tune/build_pcac_xml.csh, main/sfpcac/run_tune/build_smeared_wloops_xml.csh, main/sfpcac/run_tune/build_smeared_wloops_xml.pl, main/sfpcac/run_tune/build_unsmeared_wloops_xml.csh, main/sfpcac/run_tune/build_unsmeared_wloops_xml.pl, main/sfpcac/run_tune/build_xml.csh, main/sfpcac/run_tune/clean_previous_lime.pl, main/sfpcac/run_tune/coeffs_syz.pl, main/sfpcac/run_tune/colorvec_work.pl, main/sfpcac/run_tune/compute_coeffs_syz.pl, main/sfpcac/run_tune/compute_tadpoles.csh, main/sfpcac/run_tune/concat_inline_xml.csh, main/sfpcac/run_tune/concat_wilslp_xml.pl, main/sfpcac/run_tune/continue_copy_hmc.pl, main/sfpcac/run_tune/continue_copy_hmc_nf21.pl, main/sfpcac/run_tune/continue_hmc.pl, main/sfpcac/run_tune/continue_hmc_nf21.pl, main/sfpcac/run_tune/continue_noclean_hmc.pl, main/sfpcac/run_tune/copy_and_clean_previous_lime.pl, main/sfpcac/run_tune/copy_and_clean_to_cache.pl, main/sfpcac/run_tune/copy_previous_lime.pl, main/sfpcac/run_tune/copy_to_cache.pl, main/sfpcac/run_tune/ending.xml, main/sfpcac/run_tune/extend_all_mixed_valence_per_spec.pl, main/sfpcac/run_tune/extend_pbs_jobs_work.pl, main/sfpcac/run_tune/extract_tadpoles.csh, main/sfpcac/run_tune/find_my_dir.pl, main/sfpcac/run_tune/find_not_running.pl, main/sfpcac/run_tune/generate_nf21_syz.pl, main/sfpcac/run_tune/generate_nf21_syz_largevol.pl, main/sfpcac/run_tune/generate_nf2_sp.pl, main/sfpcac/run_tune/generate_nf2_wl.pl, main/sfpcac/run_tune/generate_nf3_sp.pl, main/sfpcac/run_tune/generate_nf3_syz.pl, main/sfpcac/run_tune/generate_nf3_syz_largevol.pl, main/sfpcac/run_tune/generate_nf3_syz_largevol_taditer_unprec.pl, main/sfpcac/run_tune/generate_nf3_syz_taditer.pl, main/sfpcac/run_tune/generate_nf3_syz_tree.pl, main/sfpcac/run_tune/generate_tune_from_math_joint.pl, main/sfpcac/run_tune/generate_tune_from_phys.pl, main/sfpcac/run_tune/launch_pbs_jobs_work.pl, main/sfpcac/run_tune/lower_min.xsl, main/sfpcac/run_tune/pbs_strip_driver.pl, main/sfpcac/run_tune/pbs_strip_per_avg_mixed_valence.pl, main/sfpcac/run_tune/pbs_strip_per_avg_mixed_valence_work.csh, main/sfpcac/run_tune/pbs_strip_work.csh, main/sfpcac/run_tune/print_hmc_param.pl, main/sfpcac/run_tune/queue_arch_type_maui.csh, main/sfpcac/run_tune/queue_arch_type_maui.pl, main/sfpcac/run_tune/queue_arch_type_maui.sh, main/sfpcac/run_tune/rannyu.pl, main/sfpcac/run_tune/run_all_diagonal_valence_per_spec.pl, main/sfpcac/run_tune/run_all_light_dir_qpot.pl, main/sfpcac/run_tune/run_all_light_dir_spec.pl, main/sfpcac/run_tune/run_all_light_per_qpot.pl, main/sfpcac/run_tune/run_all_light_per_spec.pl, main/sfpcac/run_tune/run_all_light_qpot_work.pl, main/sfpcac/run_tune/run_all_mixed_valence_per_spec.pl, main/sfpcac/run_tune/run_all_mixed_valence_per_spec_eigcg.pl, main/sfpcac/run_tune/run_chroma.pl, main/sfpcac/run_tune/run_colorvec_baryon_nf3.pl, main/sfpcac/run_tune/run_colorvec_genprop_nf3.pl, main/sfpcac/run_tune/run_colorvec_meson_nf3.pl, main/sfpcac/run_tune/run_colorvec_prop_nf3.pl, main/sfpcac/run_tune/run_diagonal_valence_spec_per.pl, main/sfpcac/run_tune/run_hmc.pl, main/sfpcac/run_tune/run_laplace.pl, main/sfpcac/run_tune/run_launch_sp.pl, main/sfpcac/run_tune/run_launch_syz.pl, main/sfpcac/run_tune/run_launch_tree.pl, main/sfpcac/run_tune/run_light_nu_dir.pl, main/sfpcac/run_tune/run_light_nu_per.pl, main/sfpcac/run_tune/run_light_qpot_dir.pl, main/sfpcac/run_tune/run_light_qpot_per.pl, main/sfpcac/run_tune/run_mixed_valence_spec_eigcg_per.pl, main/sfpcac/run_tune/run_mixed_valence_spec_per.pl, main/sfpcac/run_tune/run_tune_nf21_sp.pl, main/sfpcac/run_tune/run_tune_sp.pl, main/sfpcac/run_tune/run_tune_syz.pl, main/sfpcac/run_tune/run_tune_tree.pl, main/sfpcac/run_tune/s_plaq.xsl, main/sfpcac/run_tune/s_plaq_stout.xsl, main/sfpcac/run_tune/spec_per_work.pl, main/sfpcac/run_tune/spec_per_work_eigcg.pl, main/sfpcac/run_tune/strip_dir_avg_data.csh, main/sfpcac/run_tune/strip_dir_merge_data.csh, main/sfpcac/run_tune/strip_per_avg_data.csh, main/sfpcac/run_tune/strip_per_avg_diagonal_valence.csh, main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh, main/sfpcac/run_tune/strip_per_avg_mixed_valence_cache.csh, main/sfpcac/run_tune/strip_per_merge_data.csh, main/sfpcac/run_tune/strip_per_merge_diagonal_valence.csh, main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh, main/sfpcac/run_tune/t_plaq.xsl, main/sfpcac/run_tune/t_plaq_stout.xsl, main/sfpcac/run_tune/test_print.pl, main/sfpcac/run_tune/test_print2.pl, main/sfpcac/run_tune/tune_param_nf21_syz_non.pl, main/sfpcac/run_tune/tune_param_nf21_syz_per.pl, main/sfpcac/run_tune/tune_param_nf2_sp.pl, main/sfpcac/run_tune/tune_param_nf3_sp.pl, main/sfpcac/run_tune/tune_param_nf3_syz.pl, main/sfpcac/run_tune/tune_param_nf3_syz_dir.pl, main/sfpcac/run_tune/tune_param_nf3_syz_non.pl, main/sfpcac/run_tune/tune_param_nf3_syz_per.pl, main/sfpcac/run_tune/tune_param_nf3_syz_tree.pl, main/sfpcac/run_tune/tune_remez.pl, main/sfpcac/run_tune/tune_remez_nf21.pl, main/sfpcac/run_tune/upper_max.xsl, main/sfpcac/run_tune/wils_loop.xsl, main/sfpcac/run_tune/x3p5_n1_r0p14_u_s.dat, main/sfpcac/run_tune/x3p5_n1_r0p14_u_s_st.dat, main/sfpcac/run_tune/x3p5_n2_r0p14_u_s.dat, main/sfpcac/run_tune/x3p5_n2_r0p14_u_s_st.dat, main/sfpcac/run_tune/xi_3.5_n_1_spatial.dat, main/sfpcac/run_tune/xi_3.5_n_1_temporal.dat, main/sfpcac/run_tune/xi_3.5_n_2_spatial.dat, main/sfpcac/run_tune/xi_3.5_n_2_temporal.dat, main/sfpcac/run_tune/xi_3.5_n_3_spatial.dat, main/sfpcac/run_tune/xi_3.5_n_3_temporal.dat, main/spectrum/Makefile.am, main/spectrum/jack_spectrum.cc, main/spectrum/param_db.xml, main/spectrum/spectrum.cc, main/stoch/Makefile.am, main/stoch/make_stoch_group_baryon_input.pl, main/stoch/read_operdat.cc, main/stoch/read_operdat.h, main/stoch/stoch_baryon.cc, main/stoch/stoch_baryon2.cc, main/stoch/stoch_group_baryon.cc, main/stoch/stoch_group_meson.cc, main/stoch/stoch_group_meson.ini.pl, main/stoch/stoch_meson.cc, main/stoch/term_funcs.cc, main/stoch/term_funcs.h, main/strippers/Makefile.am, main/strippers/displace_funcmap.cc, main/strippers/displace_funcmap.h, main/strippers/get_pions.cc, main/strippers/hadron_2pt.cc, main/strippers/hadron_2pt.h, main/strippers/hadron_contract.cc, main/strippers/hadron_contract.h, main/strippers/hadron_contract_aggregate.cc, main/strippers/hadron_contract_aggregate.h, main/strippers/hadron_contract_factory.h, main/strippers/simple_meson_2pt_w.cc, main/strippers/simple_meson_2pt_w.h, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_buildingblocks.cc, main/strippers/strip_dwfloc.cc, main/strippers/strip_hadron_contract.cc, main/strippers/strip_hadspec.cc, main/strippers/strip_mesonspec.cc, main/strippers/strip_mres.cc, main/strippers/strip_mres4D.cc, main/strippers/strip_mresZa.cc, main/strippers/strip_nCG.cc, main/strippers/strip_npr_vertex.cc, main/strippers/strip_spectrum.cc, main/strippers/strip_spectrumOct.cc, main/strippers/strip_spectrumQll.cc, main/strippers/strip_staticlight.cc, main/strippers/strip_wallformfac.cc, main/strippers/strippers.h, main/ttt/Makefile.am, main/ttt/arrays.h, main/ttt/compute_corrs.cc, main/ttt/compute_corrs.h, main/ttt/corr_info.cc, main/ttt/corr_info.h, main/ttt/dump_qqq.cc, main/ttt/iohelp.cc, main/ttt/iohelp.h, main/ttt/qqq_props.cc, main/ttt/qqq_props.h, main/ttt/test_corr_info.cc, main/ttt/test_qqq_props.cc, main/ttt/ttt.cc, main/ttt/ttt_single.cc, main/ttt/ttt_tslice.cc, main/utils/Makefile.am, main/utils/average_cproplist.cc, main/utils/average_proplist.cc, main/utils/block_proplist.cc, main/utils/cfold.cc, main/utils/concat_and_scale_proplist.cc, main/utils/concat_proplist.cc, main/utils/eff_mass.cc, main/utils/fold.cc, main/utils/jack_corrfunc_ratio.cc, main/utils/jack_fit.cc, main/utils/jack_fit.ini.xml, main/utils/jack_ratio.cc, main/utils/merge_cproplists.cc, main/utils/merge_proplists.cc, main/utils/plot_prop.cc, main/utils/shift_corrfunc.cc, main/utils/time_reverse.cc, other_libs/Makefile.am: Changed to version 2.0. 2008-12-04 23:37 edwards * aclocal.m4, configure: Induced changes 2008-12-04 23:35 edwards * NEWS, lib/adat/handle.h, lib/adat/map_obj.h, lib/adat/map_traits.h, lib/formfac/formfac_baryon_matrix_elems.h, lib/formfac/formfac_manage.h, lib/formfac/formfac_manage_2pt.cc, lib/formfac/formfac_manage_2pt.h, lib/formfac/formfac_manage_2pt_key.cc, lib/formfac/formfac_manage_2pt_key.h, lib/formfac/formfac_manage_2pt_stripped.cc, lib/formfac/formfac_manage_2pt_stripped.h, lib/formfac/formfac_manage_3pt.cc, lib/formfac/formfac_manage_3pt.h, lib/formfac/formfac_manage_3pt_bb.cc, lib/formfac/formfac_manage_3pt_bb.h, lib/formfac/formfac_manage_3pt_cache.h, lib/formfac/formfac_manage_3pt_db.cc, lib/formfac/formfac_manage_3pt_db.h, lib/formfac/formfac_manage_3pt_key.cc, lib/formfac/formfac_manage_3pt_key.h, lib/formfac/formfac_manage_E.cc, lib/formfac/formfac_manage_E.h, lib/formfac/formfac_manage_E_key.h, lib/formfac/formfac_manage_E_stripped.h, lib/formfac/formfac_manage_Z.cc, lib/formfac/formfac_manage_Z.h, lib/formfac/formfac_manage_Z_key.h, lib/formfac/formfac_manage_Z_stripped.h, lib/formfac/formfac_manage_aggregate.cc, lib/formfac/formfac_manage_aggregate.h, lib/formfac/formfac_manage_factory.h, lib/formfac/formfac_manage_state.h, lib/formfac/formfac_matrix_elems.cc, lib/formfac/formfac_matrix_elems.h, lib/formfac/formfac_matrix_elems_factory.h, lib/formfac/formfac_meson_matrix_elems.cc, lib/formfac/formfac_meson_matrix_elems.h, lib/formfac/formfac_operators.cc, lib/formfac/formfac_operators.h, lib/formfac/formfac_operators_factory.h, lib/formfac/formfac_solver.cc, lib/formfac/formfac_solver.h, lib/formfac/formfac_solver_driver.cc, lib/formfac/formfac_solver_driver.h, lib/formfac/formfac_solver_row.cc, lib/formfac/formfac_solver_row.h, lib/formfac/hadron_2pt_corr.cc, lib/formfac/hadron_2pt_corr.h, lib/formfac/hadron_3pt_corr.cc, lib/formfac/hadron_3pt_corr.h, lib/io/adat_xmlio.cc, lib/io/adat_xmlio.h, lib/io/key_val_db.h, lib/parton/parton_correlation_functions.h, lib/parton/parton_correlation_functions_1.cc, lib/parton/parton_correlation_functions_2.cc, lib/parton/parton_derivatives.cc, lib/parton/parton_derivatives.h, lib/parton/parton_distribution_moments.cc, lib/parton/parton_distribution_moments.h, main/colorvec/baryon_2pt.cc, main/colorvec/baryon_2pt.ini.xml, main/colorvec/baryon_2pt_contract.cc, main/colorvec/baryon_2pt_contract.h, main/colorvec/baryon_3pt.cc, main/colorvec/baryon_3pt.ini.xml, main/colorvec/baryon_elem_op.cc, main/colorvec/baryon_elem_op.h, main/colorvec/dbkeys.cc, main/colorvec/dbmerge.cc, main/colorvec/dbutil.cc, main/colorvec/ensem_filenames.cc, main/colorvec/ensem_filenames.h, main/colorvec/genprop_obj.cc, main/colorvec/genprop_obj.h, main/colorvec/hadron_2pt_corr.cc, main/colorvec/hadron_2pt_corr.h, main/colorvec/hadron_3pt_corr.cc, main/colorvec/hadron_3pt_corr.h, main/colorvec/meson_2pt.cc, main/colorvec/meson_2pt.ini.xml, main/colorvec/meson_2pt_contract.cc, main/colorvec/meson_2pt_contract.h, main/colorvec/meson_3pt.cc, main/colorvec/meson_3pt.ini.xml, main/colorvec/meson_elem_op.cc, main/colorvec/meson_elem_op.h, main/colorvec/prop_obj.cc, main/colorvec/prop_obj.h, main/formfac/a0_ff.axis2.xsl, main/formfac/a0_ff.cc, main/formfac/a0_ff.ini.xml, main/formfac/a0_ff_fold.cc, main/formfac/a0_rho_fit.axis1.xsl, main/formfac/a0_rho_fit.axis2.xsl, main/formfac/a0_rho_fit.cc, main/formfac/a0_rho_fit.ini.xml, main/formfac/a0_rho_fit_fold.cc, main/formfac/b1_pion_fit.cc, main/formfac/b1_pion_fit_fold.cc, main/formfac/baryon_matrix_elems.h, main/formfac/build_cache.cc, main/formfac/build_derivatives.cc, main/formfac/current_ops.cc, main/formfac/current_ops.h, main/formfac/current_ops_factory.h, main/formfac/ensem_matrix_elems.h, main/formfac/ff.cc, main/formfac/ff.xml.ini, main/formfac/ff_driver.cc, main/formfac/file_test.cc, main/formfac/make_mom_list.cc, main/formfac/matrix_elems.cc, main/formfac/matrix_elems.h, main/formfac/matrix_elems_factory.h, main/formfac/meson_3pt_fit_proj_snk.cc, main/formfac/meson_fit.cc, main/formfac/meson_insertion_ops.cc, main/formfac/meson_insertion_ops.h, main/formfac/meson_matrix_elems.cc, main/formfac/meson_matrix_elems.h, main/formfac/operators.cc, main/formfac/operators.h, main/formfac/operators_factory.h, main/formfac/pion_b1_fit.cc, main/formfac/pion_b1_fit_fold.cc, main/formfac/pion_ff.axis1.xsl, main/formfac/pion_ff.axis2.xsl, main/formfac/pion_ff.cc, main/formfac/pion_ff.ini.xml, main/formfac/pion_ff_fold.cc, main/formfac/pion_fit.axis1.xsl, main/formfac/pion_fit.axis2.xsl, main/formfac/pion_fit.cc, main/formfac/pion_fit.ini.xml, main/formfac/pion_light_ff.ini.xml, main/formfac/pion_pion_fit.cc, main/formfac/pion_pion_fit_cons.cc, main/formfac/pion_pion_fit_cons_exc.cc, main/formfac/pion_rho_fit.cc, main/formfac/pion_rho_fit_fold.cc, main/formfac/pion_rho_fit_fold_exc.cc, main/formfac/pion_src_pion_proj_snk.cc, main/formfac/plot_axis.xsl, main/formfac/plot_axis2.xsl, main/formfac/plot_grace.xsl, main/formfac/rho_a0_fit.axis1.xsl, main/formfac/rho_a0_fit.axis2.xsl, main/formfac/rho_a0_fit.axis3.xsl, main/formfac/rho_a0_fit.cc, main/formfac/rho_a0_fit.grace2.xsl, main/formfac/rho_a0_fit.ini.xml, main/formfac/rho_a0_fit_fold.cc, main/formfac/rho_a1_fit.axis2.xsl, main/formfac/rho_a1_fit.cc, main/formfac/rho_a1_fit.ini.xml, main/formfac/rho_a1_fit_fold.cc, main/formfac/rho_fit.cc, main/formfac/rho_fit.ini.xml, main/formfac/rho_fit_fold.cc, main/formfac/rho_pion_fit.axis2.xsl, main/formfac/rho_pion_fit.axis3.xsl, main/formfac/rho_pion_fit.cc, main/formfac/rho_pion_fit.grace2.xsl, main/formfac/rho_pion_fit.ini.xml, main/formfac/rho_pion_fit_cons_exc.cc, main/formfac/rho_pion_fit_fold.cc, main/formfac/rho_pion_fit_fold.ini.xml, main/formfac/rho_pion_fit_fold_exc.cc, main/formfac/rho_src_pion_proj_snk.cc, main/formfac/state.h, main/formfac/test.cc, main/formfac/test2.cc, main/formfac/thin_bb.cc, main/formfac/wavefuncs.cc, main/formfac/wavefuncs.h: Major new release. Big house cleaning of codes. Rearranged form-factor manage system and main codes. Start of new fangled meson 3pt fitter using wavefunctions and operators. New type of db support. Abstracted out some of the colovec support. New keys and managers for Energy, Amplitude, 2pt and 3pt. 2008-12-04 23:27 edwards * configure.ac, lib/Makefile.am, main/colorvec/Makefile.am, main/formfac/Makefile.am: Major new release. Big house cleaning of codes. Rearranged form-factor manage system and main codes. 2008-12-04 14:44 edwards * lib/io/adat_io.h: Slight (non-functional) change on a read(multi3d) function. 2008-12-04 10:31 edwards * main/colorvec/scripts/: extract_all_irrep.pl, run_meson_2pt_all_irrep.pl: Generalized to support mixed valence lists. 2008-12-04 09:38 edwards * main/colorvec/scripts/file_test.pl: Changed some params. 2008-12-04 09:38 edwards * main/colorvec/scripts/run_baryon_2pt.pl: Fixed up to run. 2008-12-03 19:33 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_baryon_nf3.pl, run_colorvec_genprop_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_prop_nf3.pl: Changed find_eig_files to do a recursive copy instead of wildcard. 2008-12-01 16:08 jbulava * main/colorvec/: baryon_elem_op.cc, baryon_elem_op.h, irred_baryon_operators.cc, threequark_operators.cc: Modified the MapBaryonElementalOperator class to handle different orderings. 2008-12-01 16:06 jbulava * lib/adat/map_obj.h: Small change to allow for inheritance, changed 'private' to 'protected' 2008-11-29 21:49 edwards * lib/covfit/: BaseFitter.cc, Fitter.cc, coFitter.cc, fitter.h: Put in some judicious const char* in place of char* to make the compiler happy. 2008-11-25 11:34 edwards * main/colorvec/scripts/irrep.mixed.list: List reduced to only enumerated by J^{P} instead of J^{PC}. 2008-11-23 17:35 tag pre-adat2-0 2008-11-23 17:35 jbulava * main/colorvec/: baryon_2pt_contract.cc, threequark_operators.cc: Minor changes. Removed some cout's 2008-11-21 18:00 edwards * main/sfpcac/run_tune/run_laplace.pl: New script. 2008-11-21 00:40 edwards * lib/ensem/ensem_scalarsite_defs.h: Added DPropagator. 2008-11-20 17:26 edwards * main/colorvec/scripts/run_baryon_2pt.pl: Simplified 2008-11-20 17:25 edwards * main/colorvec/scripts/run_meson_2pt_all_ops.pl: Pull out sigma. 2008-11-20 17:23 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_baryon_nf3.pl, run_colorvec_genprop_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_prop_nf3.pl: Reorganized scripts - moved more common stuff to the "work" script. 2008-11-19 11:27 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_baryon_nf3.pl, run_colorvec_genprop_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_prop_nf3.pl: Abstracted out the copy of the evs and the config. Now return just paths so if run interactively, the files do not need to be copied. 2008-11-18 21:54 edwards * main/colorvec/scripts/extract_all_irrep.pl: Now pass in mass and ensemble info. It makes a perl data file later used by the box-plot script. 2008-11-18 16:24 edwards * main/colorvec/: hadron_2pt_corr.cc, hadron_3pt_corr.cc: Increased allowed ensemble string size to 1024. This is only for reading it back in. 2008-11-18 16:23 edwards * main/colorvec/: hadron_2pt_corr.cc, hadron_3pt_corr.cc: Changed length of strings to be read in to something more sensible. 2008-11-17 22:16 jbulava * main/colorvec/: baryon_2pt_contract.cc, baryon_elem_op.cc, irred_baryon_operators.cc, threequark_contract_ops.cc, threequark_operators.cc: I think I fixed the bug. Some optimizations to follow. 2008-11-17 11:57 edwards * main/colorvec/scripts/: colorvec_scripts.pl, run_meson_2pt_all_irrep.pl: Ooops, pulled off construct_corrmass to a generic location. 2008-11-17 11:14 edwards * main/colorvec/scripts/: colorvec_scripts.pl, run_meson_2pt_all_ops.pl: Moved corrmass construction to a generic place. 2008-11-16 17:09 edwards * main/colorvec/scripts/run_meson_2pt_all_irrep.pl: Changed arguments. Now supports both degenerate and non-degenerate quark masses. 2008-11-16 15:09 edwards * main/colorvec/scripts/: run_meson_2pt_all_irrep.pl, run_meson_2pt_all_ops.pl: Changed to rcp back files. 2008-11-16 15:08 edwards * main/colorvec/scripts/file_test.pl: Changed sigma. 2008-11-14 23:28 edwards * main/colorvec/scripts/file_test.pl: More improvements - this case to the positivity check. 2008-11-14 23:20 edwards * main/colorvec/deriv_meson_operators.cc: Fixed Minkowski phase factor on b0xD_T2. 2008-11-14 22:58 edwards * main/colorvec/: etensor.cc, etensor.h: Fixed norms and signs of Q' (ETensorP3D) tensor. 2008-11-14 16:46 tag qdp-pre-threads 2008-11-14 16:46 edwards * other_libs/ffdb-lite/src/ConfDataDBMerger.h: Added an error check on the ffdb type. 2008-11-14 16:42 edwards * main/colorvec/dbmerge.cc: Bug fix. Now hand a proper FFDB_FIX_DATA_SIZE to the types vector. 2008-11-14 10:48 edwards * main/colorvec/: etensor.cc, etensor.h: Slight tweak of doxygen comments. No functional change. 2008-11-14 10:42 edwards * main/colorvec/: etensor.cc, etensor.h: Bug fix. The initialization of E_tensorP3d didn't happen and overwrote the E_tensor3d instead. Updated code and comments. The E_tensorP3d just interchanges the first index (0 <-> 1) of the E_tensor3d. 2008-11-13 22:47 edwards * main/colorvec/dbmerge.cc: Got rid of explicit usage of "FIXED". Now, always fixed size DB's. 2008-11-13 22:40 edwards * main/colorvec/displace.cc: Grrh - bug fix. The leftRightE was still the old (wrong) style. Now uses the ETensor (Q). Interchanged the order of "j" and "k" in the loops where the nablas enter. I believe this is an overall sign for D_i and B_i, but in the case of the E_i, it has an effect. 2008-11-13 22:38 edwards * main/colorvec/deriv_meson_operators.cc: Replace some comparisons of double with "0" to instead use "0.0". I don't think this has any effect. 2008-11-13 22:03 edwards * main/colorvec/scripts/file_test.pl: Some bug fixes. 2008-11-13 17:40 edwards * main/colorvec/scripts/irrep.list: Fixed the pion_2xB_T1 op. 2008-11-13 17:36 edwards * main/colorvec/op.list: Fixed the irrep assignment of pion_2xB_T1. 2008-11-13 17:19 edwards * main/colorvec/scripts/file_test.pl: Production version. 2008-11-13 16:59 edwards * main/colorvec/scripts/file_test.pl: Improved the checks. Now have orthogonality check. 2008-11-13 15:25 edwards * main/colorvec/scripts/file_test.pl: More changes. 2008-11-13 14:28 edwards * main/colorvec/: ttensor.cc, ttensor.h: Changed documentation to match the code. 2008-11-13 14:28 edwards * main/colorvec/ttensor.cc: Bug fix. Changed the T_332 coefficient to be T_331. Same value, just the index is changed. It's a typo in the charmonium spectrum paper. 2008-11-13 11:26 jbulava * main/colorvec/irred_baryon_operators.cc: Sorted out some merge issues. Induced change in the Makefile 2008-11-12 17:43 edwards * main/colorvec/: baryon_2pt_contract.h, baryon_3pt.cc, baryon_elem_op.h, dbmerge.cc, dbutil.cc, deriv_meson_operators.cc, genprop_obj.h, hadron_2pt_corr.h, hadron_3pt_corr.h, irred_meson_operators.cc, key_val_db.h, map_obj.h, meson_2pt.cc, meson_2pt_contract.h, meson_3pt.cc, meson_elem_op.h, prop_obj.h, threequark_operators.h, twoquark_operators.h: Moved off key_val_db.h and map_obj.h to lib/io and lib/adat, respectively. 2008-11-12 17:30 edwards * lib/: Makefile.am, adat/map_obj.h, io/key_val_db.h: Added map_obj.h and key_val_db.h 2008-11-12 16:42 edwards * include/covfit/: FitParams_io.h, FpiParams_io.h, Function.h, adat_lapack.h, covarmat.h, fitter.h, jackknife.h, lapack_wrapper.h, proplist.h, statistics.h: Moved to lib 2008-11-12 16:37 edwards * aclocal.m4, configure: Induced changes 2008-11-12 16:37 edwards * Makefile.am, configure, configure.ac, include/Makefile.am, include/adat/adat_stopwatch.h, include/adat/funcmap.h, include/adat/handle.h, include/adat/objfactory.h, include/adat/objfunctor.h, include/adat/singleton.h, include/adat/typeinfo.h, include/adat/typelist.h, include/adat/typemanip.h, include/adat/typetraits.h, include/covfit/fitters/BaryonFfunc.h, include/covfit/fitters/BaryonSfunc.h, include/covfit/fitters/Lookup.h, include/covfit/fitters/chiPT_fKofPi.h, include/covfit/fitters/chiPT_mKomPi.h, include/covfit/fitters/chiPTfp.h, include/covfit/fitters/chiPTgA.h, include/covfit/fitters/chiPTlog.h, include/covfit/fitters/expon.h, include/covfit/fitters/expon_altern.h, include/covfit/fitters/exponaper.h, include/covfit/fitters/exponaper_bar.h, include/covfit/fitters/exponper.h, include/covfit/fitters/exponper_altern.h, include/covfit/fitters/exponper_altern_onemass.h, include/covfit/fitters/exponper_subtr.h, include/covfit/fitters/fitfunctions.h, include/covfit/fitters/gAJfunc.h, include/covfit/fitters/gAKfunc.h, include/covfit/fitters/polynomium.h, include/ensem/ensem.h, include/ensem/ensem_ensem.h, include/ensem/ensem_forward.h, include/ensem/ensem_io.h, include/ensem/ensem_newops.h, include/ensem/ensem_obsantisym.h, include/ensem/ensem_observable.h, include/ensem/ensem_obsmatrix.h, include/ensem/ensem_obsscalar.h, include/ensem/ensem_obstensor.h, include/ensem/ensem_obsvector.h, include/ensem/ensem_operator_tags.h, include/ensem/ensem_params.h, include/ensem/ensem_precision.h, include/ensem/ensem_primgamma.h, include/ensem/ensem_primitive.h, include/ensem/ensem_primmatrix.h, include/ensem/ensem_primscalar.h, include/ensem/ensem_primseed.h, include/ensem/ensem_primspinmat.h, include/ensem/ensem_primspinvec.h, include/ensem/ensem_primvector.h, include/ensem/ensem_random.h, include/ensem/ensem_reality.h, include/ensem/ensem_scalar_specific.h, include/ensem/ensem_scalarsite_defs.h, include/ensem/ensem_simpleword.h, include/ensem/ensem_specializations.h, include/ensem/ensem_stopwatch.h, include/ensem/ensem_traits.h, include/ensem/ensem_type_computations.h, include/formfac/formfac.h, include/formfac/formfac_baryon_matrix_elems.h, include/formfac/formfac_bb.h, include/formfac/formfac_chisqq.h, include/formfac/formfac_data_covar.h, include/formfac/formfac_ensem_linfit.h, include/formfac/formfac_ensemble.h, include/formfac/formfac_linear_covar_genfit.h, include/formfac/formfac_manage.h, include/formfac/formfac_manage_2pt.h, include/formfac/formfac_manage_3pt.h, include/formfac/formfac_manage_3pt_bb.h, include/formfac/formfac_manage_3pt_cache.h, include/formfac/formfac_manage_3pt_db.h, include/formfac/formfac_manage_3pt_stripped.h, include/formfac/formfac_manage_E.h, include/formfac/formfac_manage_aggregate.h, include/formfac/formfac_manage_factory.h, include/formfac/formfac_manage_npr.h, include/formfac/formfac_matrix_elems.h, include/formfac/formfac_matrix_elems_factory.h, include/formfac/formfac_meson_fit.h, include/formfac/formfac_meson_matrix_elems.h, include/formfac/formfac_qsq.h, include/formfac/formfac_solver.h, include/formfac/formfac_state.h, include/formfac/formfac_util.h, include/io/adat_byteorder.h, include/io/adat_io.h, include/io/adat_qdpio.h, include/io/adat_util.h, include/io/adat_xml_group_reader.h, include/io/adat_xmlio.h, include/parton/parton_correlation_functions.h, include/parton/parton_derivatives.h, include/parton/parton_distribution_moments.h, include/parton/parton_renormalization_factors.h, include/recipes/nr.h, include/recipes/nrtypes.h, include/recipes/nrtypes_nr.h, include/recipes/nrutil.h, include/recipes/nrutil_nr.h, include/recipes/print_array.h, lib/Makefile.am, lib/adat/adat_stopwatch.h, lib/adat/funcmap.h, lib/adat/handle.h, lib/adat/objfactory.h, lib/adat/objfunctor.h, lib/adat/singleton.h, lib/adat/typeinfo.h, lib/adat/typelist.h, lib/adat/typemanip.h, lib/adat/typetraits.h, lib/covfit/FitParams_io.h, lib/covfit/FpiParams_io.h, lib/covfit/Function.h, lib/covfit/adat_lapack.h, lib/covfit/covarmat.h, lib/covfit/fitter.h, lib/covfit/jackknife.h, lib/covfit/lapack_wrapper.h, lib/covfit/proplist.h, lib/covfit/statistics.h, lib/covfit/fitters/BaryonFfunc.h, lib/covfit/fitters/BaryonSfunc.h, lib/covfit/fitters/Lookup.h, lib/covfit/fitters/chiPT_fKofPi.h, lib/covfit/fitters/chiPT_mKomPi.h, lib/covfit/fitters/chiPTfp.h, lib/covfit/fitters/chiPTgA.h, lib/covfit/fitters/chiPTlog.h, lib/covfit/fitters/expon.h, lib/covfit/fitters/expon_altern.h, lib/covfit/fitters/exponaper.h, lib/covfit/fitters/exponaper_bar.h, lib/covfit/fitters/exponper.h, lib/covfit/fitters/exponper_altern.h, lib/covfit/fitters/exponper_altern_onemass.h, lib/covfit/fitters/exponper_subtr.h, lib/covfit/fitters/fitfunctions.h, lib/covfit/fitters/gAJfunc.h, lib/covfit/fitters/gAKfunc.h, lib/covfit/fitters/polynomium.h, lib/ensem/ensem.h, lib/ensem/ensem_ensem.h, lib/ensem/ensem_forward.h, lib/ensem/ensem_io.h, lib/ensem/ensem_newops.h, lib/ensem/ensem_obsantisym.h, lib/ensem/ensem_observable.h, lib/ensem/ensem_obsmatrix.h, lib/ensem/ensem_obsscalar.h, lib/ensem/ensem_obstensor.h, lib/ensem/ensem_obsvector.h, lib/ensem/ensem_operator_tags.h, lib/ensem/ensem_params.h, lib/ensem/ensem_precision.h, lib/ensem/ensem_primgamma.h, lib/ensem/ensem_primitive.h, lib/ensem/ensem_primmatrix.h, lib/ensem/ensem_primscalar.h, lib/ensem/ensem_primseed.h, lib/ensem/ensem_primspinmat.h, lib/ensem/ensem_primspinvec.h, lib/ensem/ensem_primvector.h, lib/ensem/ensem_random.h, lib/ensem/ensem_reality.h, lib/ensem/ensem_scalar_specific.h, lib/ensem/ensem_scalarsite_defs.h, lib/ensem/ensem_simpleword.h, lib/ensem/ensem_specializations.h, lib/ensem/ensem_stopwatch.h, lib/ensem/ensem_traits.h, lib/ensem/ensem_type_computations.h, lib/formfac/formfac.h, lib/formfac/formfac_baryon_matrix_elems.h, lib/formfac/formfac_bb.h, lib/formfac/formfac_chisqq.h, lib/formfac/formfac_data_covar.h, lib/formfac/formfac_ensem_linfit.h, lib/formfac/formfac_ensemble.h, lib/formfac/formfac_linear_covar_genfit.h, lib/formfac/formfac_manage.h, lib/formfac/formfac_manage_2pt.h, lib/formfac/formfac_manage_3pt.h, lib/formfac/formfac_manage_3pt_bb.h, lib/formfac/formfac_manage_3pt_cache.h, lib/formfac/formfac_manage_3pt_db.h, lib/formfac/formfac_manage_3pt_stripped.h, lib/formfac/formfac_manage_E.h, lib/formfac/formfac_manage_aggregate.h, lib/formfac/formfac_manage_factory.h, lib/formfac/formfac_manage_npr.h, lib/formfac/formfac_matrix_elems.h, lib/formfac/formfac_matrix_elems_factory.h, lib/formfac/formfac_meson_fit.h, lib/formfac/formfac_meson_matrix_elems.h, lib/formfac/formfac_qsq.h, lib/formfac/formfac_solver.h, lib/formfac/formfac_state.h, lib/formfac/formfac_util.h, lib/io/adat_byteorder.h, lib/io/adat_io.h, lib/io/adat_qdpio.h, lib/io/adat_util.h, lib/io/adat_xml_group_reader.h, lib/io/adat_xmlio.h, lib/parton/parton_correlation_functions.h, lib/parton/parton_derivatives.h, lib/parton/parton_distribution_moments.h, lib/parton/parton_renormalization_factors.h, lib/recipes/nr.h, lib/recipes/nrtypes.h, lib/recipes/nrtypes_nr.h, lib/recipes/nrutil.h, lib/recipes/nrutil_nr.h, lib/recipes/print_array.h, main/baryon_analysis/Makefile.am, main/baryons/Makefile.am, main/colorvec/Makefile.am, main/ensem/Makefile.am, main/fitters/Makefile.am, main/formfac/Makefile.am, main/fpi/Makefile.am, main/mres/Makefile.am, main/mres_calc_exercise/Makefile.am, main/qqbar/Makefile.am, main/reconfit/Makefile.am, main/sfpcac/Makefile.am, main/sfpcac/extract_xi_g.pl, main/spectrum/Makefile.am, main/stoch/Makefile.am, main/strippers/Makefile.am, main/ttt/Makefile.am, main/utils/Makefile.am: Big change for the library. Moved away from "include" and "lib" model. Now, everthing is in a "lib" directory. Really not a big change for main programs. The corresponding main/*/Makefile.am are pointed to "lib" instead of "include". 2008-11-12 15:15 edwards * main/colorvec/simple_meson_operators.cc: Grrh. Fixed a relative sign between rho_2 and the Gamma[n] varieties. 2008-11-12 15:08 edwards * main/colorvec/scripts/extract_all_irrep.pl: Simplified and added src_spin and snk_spin. 2008-11-12 14:51 edwards * main/colorvec/map_obj.h: Rerranged slightly. 2008-11-12 14:51 edwards * main/colorvec/deriv_meson_operators.cc: Bug fix. Two ops used "Gamma" instead of "GammaDP". 2008-11-12 13:17 edwards * main/colorvec/: baryon_2pt.cc, baryon_3pt.cc, deriv_meson_operators.cc, deriv_meson_operators.h, displace.cc, displace.h, etensor.cc, etensor.h, generate_all_ops.pl, hadron_2pt_corr.cc, hadron_2pt_corr.h, hadron_3pt_corr.cc, hadron_3pt_corr.h, irred_baryon_operators.cc, irred_baryon_operators.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, meson_2pt.ini.xml, meson_3pt.cc, mink_phase.cc, simple_baryon_operators.cc, simple_baryon_operators.h, simple_meson_operators.cc, simple_meson_operators.h, threequark_operators.h, twoquark_operators.h: The big change is to the keys for hadron2Pt and hadron3Pt. Added more stuff. Overhauled how the deriv meson ops are constructed. Now go through a small number of functions. Changed "indices" in two and three quark ops and added now "getSpin" and "getLorentz". These are used for the key construction. Changed the "etensor" to use the newer (correct) version with sqrt(2)'s. 2008-11-12 13:03 edwards * main/colorvec/scripts/file_test.pl: More sophisticated checks. 2008-11-12 12:29 edwards * main/colorvec/scripts/irrep.list: Changed to new names. 2008-11-12 12:07 edwards * main/colorvec/scripts/: colorvec_scripts.pl, extract_all_irrep.pl, irrep.list, run_baryon_2pt.pl, run_meson_2pt_all_irrep.pl, run_meson_2pt_all_ops.pl, run_meson_2pt_mom.pl, run_meson_3pt.pl: More scripts. 2008-11-12 12:03 edwards * main/colorvec/scripts/file_test.pl: First version of file test script. 2008-11-10 16:43 edwards * main/colorvec/op.list: Operator list. 2008-11-10 15:41 tag adat1-44-0 2008-11-10 15:41 edwards * NEWS: More info on 1.44 2008-11-10 15:40 edwards * aclocal.m4, configure: Induced changes 2008-11-10 15:40 edwards * NEWS: Info on 1.44 2008-11-10 15:38 edwards * configure.ac: Changed to 1.44 2008-11-08 22:39 edwards * main/colorvec/: simple_meson_operators.cc, simple_meson_operators.h: Reimplemented how the gamma matrices are established for these simple meson ops. Now, directly construct spin matrices for gamma_4*gamma_5*gamma_i, etc. Do the phase factors at that level. Removed the redundant call backs for a0,pion, etc., in favor of using the Gamma. Fixed (hopefully) all the phase factors, and have checked the phases for the direction versions (in free field), have positive diagonal correlators. 2008-11-08 22:37 edwards * main/colorvec/mink_phase.cc: Fixed pion_2 phase. This routine is now obsolete. 2008-11-08 22:36 edwards * main/colorvec/meson_2pt.ini.xml: Added in direction version of all ops. 2008-11-08 22:36 edwards * main/colorvec/deriv_meson_operators.cc: Fixed rhoxNABLA_A1. Was an array version, now just an A1. 2008-11-08 22:35 edwards * main/colorvec/generate_all_ops.csh: Changed to a perl script. 2008-11-08 22:35 edwards * main/colorvec/generate_all_ops.pl: Generate all the meson ops. 2008-11-08 22:33 edwards * include/ensem/ensem_scalar_specific.h: Removed some old PRETTY_FUNCTION debugging statements. 2008-11-07 09:59 dgr * configure, main/reconfit/Makefile.am, main/reconfit/covariance_new.cpp, main/reconfit/covariance_new.h, main/reconfit/fit_variational_real.cpp, main/reconfit/jack_minuit.cpp, main/reconfit/jack_minuit.h, main/reconfit/load_corrs.h, main/reconfit/new_ensem_matrix.cpp, main/reconfit/new_ensem_matrix.h, main/reconfit/plotter.cpp, main/reconfit/plotter.h, main/reconfit/prin_corr.cpp, main/reconfit/prin_corr.h, main/reconfit/variational_real.cpp, main/reconfit/variational_real.h: Added Jo's reconstruction code 2008-11-07 09:58 dgr * configure.ac: Added a configuration script for Minuit1 2008-11-06 16:35 dgr * configure.ac: Added Jo Dudek's fitting stuff to the configure.ac 2008-11-06 13:18 tag qio2-3-7 2008-11-06 13:18 detar * other_libs/c-lime/: aclocal.m4, configure, examples/lime_pack.c: Support in XML strings. Bug fix for file splitting/joining with subset records 2008-11-05 10:10 jbulava * main/stoch/stoch_group_baryon.cc: Just some trivial editing 2008-11-05 10:09 jbulava * main/colorvec/: baryon_2pt_contract.cc, irred_baryon_operators.cc, irred_meson_operators.cc, threequark_contract_ops.cc: Made some changes to the irred meson operators 2008-11-03 21:50 edwards * main/sfpcac/run_tune/run_colorvec_genprop_nf3.pl: Changed prop_db and num_vecs. 2008-11-03 21:50 edwards * main/sfpcac/run_tune/colorvec_work.pl: Removed Gamma15 measurement in genprop. 2008-11-02 17:39 edwards * main/colorvec/hadron_2pt_corr.cc: Rerranged how src and snk_name are printed in xml and diagnostic output. 2008-11-01 23:10 edwards * main/colorvec/dbmerge.cc: Changed page size. 2008-10-30 17:05 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_genprop_nf3.pl: Fixed how the genprop scripts work. Added some new versions of the peram xml generator for a list of time slices. 2008-10-29 15:28 edwards * main/sfpcac/run_tune/colorvec_work.pl: Fixed name of erase task. 2008-10-29 15:20 edwards * main/sfpcac/run_tune/: run_colorvec_nf3.pl, run_colorvec_prop_nf3.pl: Moved run_colorvec_nf3 to run_colorvec_prop_nf3 2008-10-29 15:19 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_genprop_nf3.pl, run_colorvec_nf3.pl: Some more fixes. 2008-10-29 14:13 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_baryon_nf3.pl, run_colorvec_genprop_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_nf3.pl, run_colorvec_read_prop_meson_nf3.pl, run_colorvec_save_prop.pl: Added genprop. Now pass in explicit t_source or t_sink to prop routines. Changed t_sources to t_source - now only a single value and not an array. 2008-10-29 12:15 edwards * main/sfpcac/run_tune/: run_colorvec_baryon_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_nf3.pl: Use eigs. 2008-10-29 00:31 edwards * main/colorvec/baryon_3pt.ini.xml: Added more currents. 2008-10-29 00:30 edwards * main/colorvec/: baryon_3pt.cc, meson_3pt.cc: Bug fix. The peram (not hit by the current) should only propagator from t_i to t_f. It's not evaluated at "t". Fixed that, and now the Q^2=0 current for pion, gamma=8, has a constant plateau for p_i=p_f=000, and p_i=p_f=100 (or -100). This is true for both meson (pi0) and nucleon_cg5. Hurray. 2008-10-28 22:29 edwards * main/Makefile.am: Added stoch back into the dirs list. 2008-10-28 22:24 edwards * include/ensem/ensem_primseed.h: Added BinaryReader/Writer support for seeds. 2008-10-28 16:37 jbulava * include/ensem/ensem_scalar_specific.h: Removed some cout statements. 2008-10-28 16:03 jbulava * main/colorvec/: threequark_operators.cc, twoquark_operators.cc: smearing wieghts now have correct additional factor of 1/4. 2008-10-28 00:51 edwards * main/colorvec/dbutil.cc: Slightly improved error printing on "get" if key not found. 2008-10-28 00:50 edwards * main/colorvec/dbutil.cc: Added error check on "get". 2008-10-28 00:31 edwards * main/colorvec/: meson_2pt.ini.xml, meson_3pt.ini.xml: Fixed name of output dbs. 2008-10-28 00:27 edwards * main/colorvec/: meson_2pt.ini.xml, meson_3pt.ini.xml: Added second fake config. This is to help test the dbmerge and dbutil routines. 2008-10-28 00:26 edwards * main/colorvec/: baryon_3pt.cc, meson_3pt.cc: Fixed how num_vecs was used. It's not used for the bin_corrs, now. There were some invalid references to "nn" in hadron_corr_keys when it should be "mdg". 2008-10-28 00:25 edwards * main/colorvec/hadron_3pt_corr.cc: Rearranged output. 2008-10-27 23:45 edwards * other_libs/ffdb-lite/src/ConfFxDSizeStoreDB.h: Replaced insert() with an earlier version that does not go throught the insert(string,string) version. There appears to be some problem with that routine. Left the code for it in place, but put a fatal error message when the string variant is called. Otherwise, all the downstream routines with 2pt, dbmerge and dbutil in adat/main/colorvec seem to work correctly. The string variant is apparently not used. 2008-10-27 16:50 edwards * main/colorvec/meson_2pt.ini.xml: Removed redundant rho_2xLap_T1 op. 2008-10-27 00:25 edwards * main/colorvec/dbmerge.cc: Changed cache size. 2008-10-27 00:22 edwards * other_libs/ffdb-lite/src/: AllConfStoreDB.h, ConfFxDSizeStoreDB.h, DBFunc.h: Added checks of key before insertion in fixed record objects. If key exists, then replace. If not, then insert. 2008-10-25 12:46 edwards * main/colorvec/: baryon_2pt.cc, dbmerge.cc, dbutil.cc, ensem_filenames.cc, ensem_filenames.h, hadron_2pt_corr.cc, hadron_2pt_corr.h, hadron_3pt_corr.cc, hadron_3pt_corr.h, meson_2pt.cc: Merge and db utilities working. Added xml reading/writing of 2pt and 3pt keys. Standardized the ensemble file names for 2pt and 3pt. 2008-10-25 10:45 edwards * other_libs/ffdb-lite/src/AllConfStoreDB.h: Removed Ensem functions. Not used nor needed. 2008-10-25 10:45 edwards * main/colorvec/dbutil.cc: Find the number of configs automatically - no longer hardwired. 2008-10-24 11:22 edwards * main/colorvec/Makefile.am: Added dbmerge and dbutil as main programs. 2008-10-24 11:21 edwards * other_libs/ffdb-lite/src/: ConfDataDBMerger.h, ConfigInfoData.cpp, ConfigInfoData.h, ConfigInfoManager.cpp, ConfigInfoManager.h, ConfigNumKey.cpp, ConfigNumKey.h, HashFunc.cpp, HashFunc.h, Makefile.am: Added A ConfDataDBMerger.h A ConfigInfoData.cpp A ConfigInfoData.h A ConfigInfoManager.cpp A ConfigInfoManager.h A ConfigNumKey.cpp A ConfigNumKey.h A HashFunc.cpp A HashFunc.h from module "ffdb". 2008-10-24 00:27 edwards * main/colorvec/: dbmerge.cc, dbutil.cc: First versions of merge and a utility code. 2008-10-23 23:46 edwards * main/colorvec/: baryon_2pt.cc, baryon_3pt.cc, meson_2pt.cc, meson_3pt.cc: Removed explicit name of program in error messages. Instead, use argv[0] or __func__. 2008-10-23 23:43 edwards * include/ensem/ensem_scalar_specific.h: Overhauld BinaryReader/Writer read/write functions. They did not work. The Ensem versions are now like the operator<< and >> versions. A header is read/written. The EScalar versions do not write a header. This is in contrast to the ascii file versions. This is because the read/write functions can be used reading objects deep within a file. They are not necessarily stand-alone files. So, the EScalar objects have to read/write generic things like Complex, written by chroma, that don't have (or know anything about) ensemble headers. 2008-10-23 23:40 edwards * include/ensem/: ensem_ensem.h, ensem_obsscalar.h, ensem_obstensor.h, ensem_primmatrix.h, ensem_primscalar.h, ensem_primvector.h, ensem_reality.h: Added BinaryReader/Writer read/write functions. 2008-10-23 23:38 edwards * include/ensem/ensem_obsvector.h: Bug fix. Copy constructor did not work properly. Also, added BinaryReader/Writer read/write functions. 2008-10-23 23:36 edwards * include/ensem/ensem_obsmatrix.h: Some changes. Not working yet (or used), though. 2008-10-21 23:44 edwards * main/colorvec/: hadron_2pt_corr.cc, hadron_2pt_corr.h: Added an xml reader/writer for hadron2ptcorr keys. 2008-10-20 13:57 edwards * other_libs/minuit/test/MnSim/: FlatRandomGen.h, GaussRandomGen.h: Removed std:: from rand(). Not a part of std namespace, according to gcc-4.3. 2008-10-20 13:48 edwards * main/colorvec/: Makefile.am, baryon_2pt.cc, baryon_2pt_contract.cc, baryon_2pt_contract.h, baryon_2pt_dispatch.cc, baryon_2pt_dispatch.h, baryon_3pt.cc, baryon_3pt.ini.xml, genprop_obj.cc, meson_2pt.cc, meson_2pt_contract.cc, meson_2pt_contract.h, meson_2pt_dispatch.cc, meson_2pt_dispatch.h, meson_3pt.cc: Added baryon_3pt, and meson_3pt now runs. Added arrays to indicate which time slices of creat and annih ops are used. This is needed to support 3pt funcs. 2008-10-20 13:47 edwards * main/colorvec/threequark_contract_ops.cc: Added some more sanity checks. 2008-10-17 16:56 edwards * main/colorvec/op.list: Irreps and continuum of simple and deriv meson ops. 2008-10-17 15:31 edwards * main/colorvec/simple_meson_operators.cc: Added the _2 versions of the pion and rho. 2008-10-17 15:08 edwards * main/ttt/: arrays.h, iohelp.cc: Put in missing include of stdlib.h for the exit() function. 2008-10-15 16:43 edwards * main/colorvec/: baryon_2pt_dispatch.cc, meson_2pt_dispatch.cc: Put in fixes to get OpenMP to compile. 2008-10-15 16:34 jbulava * main/colorvec/: baryon_2pt_dispatch.cc, meson_2pt_dispatch.cc: Changed the openmp syntax. Works fine for me. 2008-10-15 16:14 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt_contract.cc, baryon_2pt_contract.h, baryon_2pt_dispatch.cc, baryon_2pt_dispatch.h, genprop_obj.cc, genprop_obj.h, meson_2pt.cc, meson_2pt_contract.cc, meson_2pt_contract.h, meson_2pt_dispatch.cc, meson_2pt_dispatch.h, meson_3pt.cc, meson_3pt.ini.xml: Changed meson_2pt,3pt and baryon_2pt to use functions to produce the source and sink momentum. This is where the phase conventions for the fourier transforms is kept. Changed main codes and underlying 2pt codes to use an array of the "t0" to use, and not longer pass in the ActiveT0_t struct. Switched meson_3pt to take an array of genprop_dbs, but only 1 prop_db. 2008-10-15 16:13 edwards * main/colorvec/: Makefile.am, mom_conv.cc, mom_conv.h: Added mom_conv.{h,cc}. This is where the momentum phase conventions are kept. 2008-10-14 23:43 edwards * main/colorvec/: meson_3pt.cc, meson_3pt.ini.xml: Fixed name of outer group and to use second quark mass. 2008-10-14 23:42 edwards * main/colorvec/Makefile.am: Moved meson_3pt to bin_PROGRAMS. 2008-10-14 16:16 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt_contract.cc, baryon_2pt_contract.h, baryon_2pt_dispatch.cc, baryon_2pt_dispatch.h, genprop_obj.cc, meson_2pt.cc, meson_2pt_contract.cc, meson_2pt_contract.h, meson_2pt_dispatch.cc, meson_2pt_dispatch.h, meson_3pt.ini.xml, prop_obj.cc, prop_obj.h, threequark_contract_ops.cc, threequark_contract_ops.h, threequark_dist_obj.cc, threequark_dist_obj.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_dist_obj.cc, twoquark_dist_obj.h: Overhauled the Propagator interface. Now, no more Propagator class and TwoQuarkDistOp class. Now all in terms of Rep_t. New 3pt functions. 2008-10-14 16:14 edwards * main/colorvec/: Makefile.am, meson_3pt.cc: Added meson 3pt support. 2008-10-14 00:17 edwards * main/colorvec/: genprop_obj.cc, genprop_obj.h, hadron_3pt_corr.cc, hadron_3pt_corr.h: First version of generalized peram reader and hadron 3pt correlator key/value system. 2008-10-13 21:39 edwards * main/colorvec/: baryon_2pt_dispatch.cc, meson_2pt_dispatch.cc: Added some c-preprocessor warning that OpenMP is being used. 2008-10-13 15:39 edwards * main/colorvec/: baryon_2pt.cc, meson_2pt.cc: Changed call to contractTimeSlice to a two or three QuarkContractTimeChunk. This will dispatch a chunk of time slices, possibly using OpenMP. 2008-10-13 15:38 edwards * main/colorvec/: Makefile.am, baryon_2pt_dispatch.cc, baryon_2pt_dispatch.h, meson_2pt_dispatch.cc, meson_2pt_dispatch.h: Added {meson,baryon}_2pt_dispatch.{h,cc} 2008-10-13 12:26 edwards * main/colorvec/: meson_2pt.cc, twoquark_operators.cc: Turned off some debugging. 2008-10-13 10:53 edwards * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, meson_2pt_contract.cc, simple_meson_operators.cc, simple_meson_operators.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_operators.cc, twoquark_operators.h: Changed interface for twoquark_operators. Now, the objects never hold the actual data, but produce an TwoQuarkOperatorRep_t upon the call to "construct". The operators only hold the spin and displacement info. Which ops are constructed is now held in state in the caller, in fact they are put into a map held by the parent. There is a new contract routine that takes this map of OperatorRep and does the actual contraction. This is split off into its own file. It can be called by a 3-pt parent. 2008-10-13 10:50 edwards * main/colorvec/Makefile.am: Added meson_2pt_contract.{h,cc}. 2008-10-13 10:47 edwards * main/colorvec/baryon_2pt_contract.cc: Bug fix in the operator<() ; had the wrong array size. 2008-10-13 00:44 edwards * main/colorvec/: meson_2pt_contract.cc, meson_2pt_contract.h: First version of meson 2pt stand-alone contraction. 2008-10-13 00:43 edwards * main/colorvec/: threequark_operators.cc, threequark_operators.h: Removed some debugging statements. 2008-10-12 18:03 edwards * main/colorvec/: baryon_2pt.cc, irred_baryon_operators.cc, irred_baryon_operators.h, simple_baryon_operators.cc, simple_baryon_operators.h, threequark_contract_ops.cc, threequark_contract_ops.h, threequark_operators.cc, threequark_operators.h: Changed interface for threequark_operators. Now, the objects never hold the actual data, but produce an ThreeQuarkOperatorRep_t upon the call to "construct". The operators only hold the spin and displacement info. Which ops are constructed is now held in state in the caller, in fact they are put into a map held by the parent. There is a new contract routine that takes this map of OperatorRep and does the actual contraction. This is split off into its own file. It can be called by a 3-pt parent. 2008-10-12 18:00 edwards * main/colorvec/: Makefile.am, baryon_2pt_contract.cc, baryon_2pt_contract.h: Split off contraction part of baryon_2pt.cc. New baryon_2pt_contract. 2008-10-11 17:18 edwards * main/colorvec/: baryon_2pt.cc, threequark_contract_ops.cc: Added some comments. 2008-10-11 17:11 edwards * main/colorvec/baryon_2pt.cc: I believe this is a bug fix. The cor132 should be subtracted from cor123. 2008-10-09 23:41 jbulava * main/colorvec/make_adat_baryon_input.pl: Actually runs now. 2008-10-09 23:33 jbulava * main/colorvec/make_adat_baryon_input.pl: Added a perl script to generate baryon input 2008-10-09 23:31 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: More minor changes 2008-10-09 22:52 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: created nucleonBaryonOperators. 2008-10-09 14:21 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: Greatly simplified the code by switching to dirac pauli 2008-10-09 10:42 edwards * main/colorvec/threequark_operators.cc: Turned off some other debugging output. 2008-10-09 10:38 edwards * main/colorvec/baryon_2pt.cc: Turned off debugging. 2008-10-09 10:19 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: took out local smearing parameter. 2008-10-09 00:01 edwards * main/colorvec/simple_baryon_operators.cc: Simplified spin construction more. 2008-10-09 00:00 edwards * main/colorvec/: spin_rep.cc, spin_rep.h: Added a sparse rep version of a SpinVector. 2008-10-08 22:55 edwards * main/colorvec/: deriv_meson_operators.cc, displace.cc, displace.h, prop_obj.cc, simple_baryon_operators.cc, simple_meson_operators.cc, spin_rep.cc, twoquark_contract_ops.cc, twoquark_contract_ops.h: Big change. Switch all the code (except the irred stuff) to use Dirac-Pauli instead of Degrand-Rossi basis. Now, the perams are rotated to DP when read. All the gamma matrix construction for the mesons is done directly in DP. The simple baryon ops have been changed as well. 2008-10-08 22:54 edwards * main/colorvec/meson_2pt.ini.xml: Switched back to 0 mom. 2008-10-08 16:52 edwards * main/colorvec/1mm.ini.xml: Added sigma. 2008-10-08 16:04 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: Split irredBaryonOperators into source and sink operators to handle multiplication by gamma_4 at the source. 2008-10-08 15:55 edwards * include/ensem/: ensem_forward.h, ensem_obsscalar.h, ensem_obsvector.h, ensem_primscalar.h, ensem_reality.h, ensem_scalarsite_defs.h: More changes to get a functioning GammaDP (Dirac-Pauli) basis. 2008-10-08 15:37 edwards * include/ensem/: ensem_ensem.h, ensem_newops.h, ensem_primgamma.h, ensem_primspinmat.h, ensem_primspinvec.h: Added a Dirac-Pauli version of the Gamma basis - called GammaDP(), GammaConstDP<>, GammaTypeDP<>. 2008-10-08 10:51 jbulava * main/colorvec/simple_baryon_operators.cc: fixed conversion from DP to DR. Have not yet compared with irred_baryon_ops 2008-10-08 00:04 edwards * main/colorvec/meson_2pt.cc: Rerranged the bulk of the contraction loop into its own stand-alone function. The caller has a very tight loop over the chunks of time-slices. Can now be threaded. 2008-10-07 23:32 edwards * other_libs/xpath_reader/include/xml_array.h: Moved out of the class the unary operator-(), and made it a global function. 2008-10-07 23:32 edwards * other_libs/xpath_reader/include/xml_array2d.h: Added some diagnostic output in case of allocation failures. 2008-10-07 22:24 edwards * main/colorvec/: baryon_2pt.cc, meson_2pt.cc: Turn off some diagnostic output - it's too verbose. 2008-10-07 17:20 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, irred_baryon_operators.cc, irred_baryon_operators.h, simple_baryon_operators.cc, simple_baryon_operators.h, threequark_contract_ops.cc, threequark_operators.cc, threequark_operators.h: Overhauled the construct function for the three-quark ops. Now, have a separate load and construct. Can have multiple time slices live concurrently. Made a first pass at extracting all read functions from inside a critical loop. Merge the eigenvalue reweighting version of the constructor to be the main version. Now pass in a smearing weight. 2008-10-07 17:20 edwards * main/colorvec/: twoquark_operators.cc, twoquark_operators.h: Removed commented out num_vecs in the rep and function calls. 2008-10-07 17:19 edwards * main/colorvec/meson_2pt.ini.xml: Switched to mom=(1,0,0). 2008-10-07 17:18 edwards * main/colorvec/meson_2pt.ini.xml: Switched back to 0 momentum. 2008-10-07 17:18 edwards * main/colorvec/meson_2pt.cc: Fixed uses of stopwatch. 2008-10-07 16:00 edwards * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, meson_2pt.ini.xml, simple_meson_operators.cc, simple_meson_operators.h, twoquark_contract_ops.cc, twoquark_operators.cc, twoquark_operators.h: Overhauled the construct function for the twoquark ops. Now, have a separate load and construct. Can have multiple time slices live concurrently. Made a first pass at extracting all read functions from inside a critical loop. Merge the eigenvalue reweighting version of the constructor to be the main version. Now pass in a smearing weight. 2008-10-07 15:15 dgr * main/ttt/ttt_tslice.cc: Now takes first and last timeslice as argument to ttt_tslice 2008-10-07 11:57 jbulava * main/colorvec/: baryon_2pt.cc, irred_baryon_operators.cc: induced changes fixed during merge 2008-10-06 23:16 edwards * main/colorvec/meson_2pt.cc: Moved around some timings. 2008-10-06 23:07 edwards * main/colorvec/meson_2pt.cc: Moved creation operator creation out of for(t) loop. 2008-10-06 17:40 edwards * main/colorvec/: baryon_2pt.cc, irred_baryon_operators.cc, irred_baryon_operators.h, simple_baryon_operators.cc, simple_baryon_operators.h, threequark_contract_ops.cc, threequark_operators.cc, threequark_operators.h: Major change in data rep for the 3 quark ops. Now, hold a bag of the elementals. Only read them once. Currently, still do the multiplications on all elementals, but that change is next. 2008-10-06 17:39 edwards * main/colorvec/twoquark_operators.cc: Moved around an initialization line. 2008-10-06 17:39 edwards * main/colorvec/twoquark_operators.h: Changed some indenting to make it easier to compare files. 2008-10-06 16:39 edwards * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, simple_meson_operators.cc, simple_meson_operators.h, twoquark_contract_ops.cc, twoquark_operators.cc, twoquark_operators.h: Major change in data rep for the 2 quark ops. Now, hold a bag of the elementals. Only read them once. Currently, still do the multiplications on all elementals, but that change is next. 2008-10-06 11:39 tag adat1-43-0 2008-10-06 11:39 edwards * NEWS: Info on 1.43.0 2008-10-06 11:37 edwards * aclocal.m4, configure: Induced changes 2008-10-06 11:36 edwards * configure.ac: Changed to 1.43.0 2008-10-06 11:14 edwards * main/colorvec/: deriv_meson_operators.cc, displace.cc, displace.h: Technically a bug fix. Moved the removeSpikes to displace. The algorithm in the deriv initDispSpin was wrong for the case when a previous displacement existed. This impacted only the gammaxE and gammaxLap operators. 2008-10-06 11:10 edwards * main/colorvec/1mm.ini.xml: Fixed input. 2008-10-06 10:44 edwards * main/colorvec/: threequark_operators.h, twoquark_operators.h: Fixed some comments. 2008-10-06 00:13 edwards * main/colorvec/irred_baryon_operators.cc: Removed spurious const bool registered statement. 2008-10-06 00:09 edwards * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: No change other than indenting. Was making changes to find what turned out to be a bug with the ensem classes. 2008-10-06 00:08 edwards * include/ensem/: ensem_obsscalar.h, ensem_primscalar.h: Added return types for peekSpin 2008-10-06 00:07 edwards * include/ensem/ensem_ensem.h: Bug fix in return type for peekSpin(EScalar); 2008-10-05 23:22 jbulava * main/colorvec/irred_baryon_operators.cc: Wierd bug I can't fix. Robert HEEEEEEEEELP!!!!!!! 2008-10-05 18:03 edwards * main/colorvec/: meson_2pt.cc, twoquark_operators.cc: Turned off debugging. 2008-10-05 17:53 edwards * main/colorvec/1mm.ini.xml: T1^{--} operator input. 2008-10-05 17:35 edwards * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, meson_2pt.ini.xml: Added gammaxlaplacian operators. 2008-10-04 21:02 edwards * main/colorvec/: Makefile.am, mink_phase.cc, mink_phase.h, simple_meson_operators.cc: Moved off the Minkowski phase factors to its own file. 2008-10-04 17:53 edwards * main/colorvec/: deriv_meson_operators.cc, irred_meson_operators.cc, simple_baryon_operators.cc, simple_meson_operators.cc: Removed spurious "const bool registered" 2008-10-04 17:52 edwards * main/colorvec/displace.cc: Removed what I think is a trivial Real() usage. 2008-10-04 16:09 edwards * main/colorvec/: deriv_meson_operators.cc, meson_2pt.cc, meson_2pt.ini.xml: Added a removeSpikes on displacement paths. Fixed a minkowski phase. 2008-10-04 16:08 edwards * main/colorvec/simple_meson_operators.cc: Improved discussion on minkowski phases. 2008-10-04 16:08 edwards * main/colorvec/: displace.cc, displace.h: Fixed doxygen comments on leftRightE. 2008-10-04 12:05 jbulava * main/colorvec/: irred_baryon_operators.cc, make_irred_meson_input.pl: Added meson input script. More changes to irred_baryon which is almost ready. 2008-10-04 00:46 edwards * main/colorvec/deriv_meson_operators.cc: Added the xE_{E,T1,T2} operators. 2008-10-04 00:45 edwards * main/colorvec/simple_meson_operators.cc: Slightly changed comment on minkowski phases. 2008-10-04 00:45 edwards * main/colorvec/: Makefile.am, rtensor.cc, rtensor.h, ttensor.cc, ttensor.h: Added rtensor.{h,cc} and ttensor.{h,cc} 2008-10-03 17:49 edwards * main/colorvec/meson_2pt.cc: Turned off some debugging output. 2008-10-03 17:48 edwards * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, displace.cc, displace.h, irred_meson_operators.cc, irred_meson_operators.h, meson_2pt.cc, simple_meson_operators.cc, spin_rep.cc, spin_rep.h, twoquark_operators.cc: Major change to have hermitian operators. There is a minus sign from the Wick contraction in the final 2pt corr, so remove that sign. Changed QuarkExpr from a list to a private type. 2008-10-03 10:31 jbulava * main/colorvec/threequark_operators.cc: Added eigenvector weights - same as twoquark_operators.cc 2008-10-03 10:20 jbulava * main/colorvec/: irred_baryon_operators.cc, irred_baryon_operators.h: Finished support for coeff xmlio and eigval weights 2008-10-02 17:16 jbulava * main/colorvec/: Makefile.am, irred_baryon_operators.cc, irred_baryon_operators.h, threequark_operators.cc, threequark_operators.h, threequark_operators_factory.cc: Added an alternative 'constructOp' method to three_quark_operators and committed the irred_baryon_operator. None of this stuff runs yet, I have to interface with the new storage paradigm, but it compiles fine. 2008-10-01 22:04 edwards * main/colorvec/: meson_2pt.cc, meson_2pt.ini.xml, prop_obj.cc, prop_obj.h: Now allow an array of prop_dbs. They are probed to find the active t0. No continual rereading of the prop_db is done. Instead, an array of the active t0 is kept. 2008-10-01 16:21 dgr * main/ttt/: Makefile.am, compute_corrs.cc, compute_corrs.h, qqq_props.cc, qqq_props.h, ttt_tslice.cc: Added ttt_tslice that computes the tt files timeslice-by-timeslice 2008-09-27 22:54 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Switch path to prop_db to use /scratch. 2008-09-27 22:49 edwards * main/sfpcac/run_tune/: run_colorvec_baryon_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_nf3.pl: Copy back prop_db 2008-09-26 22:47 edwards * main/colorvec/threequark_contract_ops.cc: Removed a small temporary. 2008-09-26 22:45 edwards * main/colorvec/threequark_contract_ops.cc: Removed a self-disparaging comment. 2008-09-26 22:31 edwards * main/colorvec/: irred_meson_operators.cc, irred_meson_operators.h: Indented some. 2008-09-26 22:18 edwards * main/colorvec/threequark_contract_ops.cc: Changed 132 multiply term to use an optimal form. 2008-09-26 16:06 tag adat1-42-0 2008-09-26 16:06 edwards * aclocal.m4, configure: Induced changes 2008-09-26 16:03 edwards * NEWS: Info on 1.42.0 2008-09-26 16:03 edwards * configure.ac: Changed to 1.42.0 2008-09-26 16:02 edwards * main/colorvec/: baryon_elem_op.cc, baryon_elem_op.h, meson_2pt.cc, meson_elem_op.cc, meson_elem_op.h, prop_obj.cc, prop_obj.h, threequark_operators.cc, threequark_operators.h, twoquark_operators.cc, twoquark_operators.h: Changed dataformat for props, mesons and baryons. Switched to fixed size DB. Now have time slice as a key. Pushed colorvec indices down into the value. 2008-09-26 16:00 tag adat1-41-0 2008-09-26 16:00 edwards * NEWS: Info on 1.41.0 2008-09-26 15:59 edwards * aclocal.m4, configure: Induced changes 2008-09-26 15:58 edwards * configure.ac: Changed to 1.41.0 2008-09-26 11:57 edwards * include/formfac/formfac_manage_3pt_cache.h: Turned back on USE_UNORDERED_MAP. 2008-09-26 11:51 edwards * include/formfac/formfac_manage_3pt_cache.h, lib/formfac/formfac_manage_3pt_cache.cc: Fixes to make intel compiler happy. 2008-09-26 11:50 edwards * lib/ensem/ensem_xmlio.cc: Commented out I think is a duplicate readArrayPrimitive definition. 2008-09-26 11:47 edwards * lib/parton/parton_distribution_moments.cc: Added a missing return statement. 2008-09-26 11:45 edwards * include/: covfit/covarmat.h, covfit/fitters/exponaper_bar.h, ensem/ensem_obstensor.h, recipes/nrutil_nr.h: Fixed some more missing includes to make the intel compiler happy. 2008-09-26 10:51 edwards * other_libs/minuit/src/MnUserTransformation.cxx: Added include and changed std::sprintf to get to compile under gcc 4.3 2008-09-26 10:49 edwards * lib/: adat/adat_stopwatch.cc, ensem/ensem_io.cc, formfac/formfac_manage_3pt_cache.cc, io/adat_io.cc: Added includes so as to compile under gcc 4.3 2008-09-25 21:15 jbulava * main/colorvec/: irred_meson_operators.cc, threequark_operators.cc, twoquark_operators.cc: Some work on the baryons. Also tweaked io for eigenvalue weights in irred meson ops. 2008-09-25 17:01 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_baryon_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_nf3.pl: Switched to using the lime version of the ev files. 2008-09-25 15:34 edwards * main/sfpcac/run_tune/: run_colorvec_baryon_nf3.pl, run_colorvec_meson_nf3.pl: Copy back db files. 2008-09-25 10:19 jbulava * main/colorvec/irred_meson_operators.cc: Fixed problems stemming from merge issues. 2008-09-24 21:37 jbulava * main/colorvec/: irred_meson_operators.cc, irred_meson_operators.h, twoquark_operators.cc, twoquark_operators.h: Added another construct method to twoquark_operators to handle the smearing. Also allow for any arbitrary list of vectors. This maybe should be put into meson_2pt 2008-09-23 23:19 edwards * main/colorvec/threequark_contract_ops.cc: Rewrote the multiply123Rep to use a more efficient algorithm. Will try this out on big size problems, then rewrite the 132 version. 2008-09-23 16:34 edwards * main/colorvec/: irred_meson_operators.cc, irred_meson_operators.h: Indented some. 2008-09-23 16:15 jbulava * main/colorvec/: irred_meson_operators.cc, irred_meson_operators.h: fix so that each irred op is given a different name 2008-09-23 15:39 jbulava * main/colorvec/map_obj.h: Changed insert method to overwrite pre-existing key pair 2008-09-23 15:03 jbulava * main/colorvec/: irred_meson_operators.cc, irred_meson_operators.h: induced changes 2008-09-23 11:51 jbulava * main/: colorvec/Makefile.am, colorvec/irred_meson_operators.cc, colorvec/irred_meson_operators.h, colorvec/twoquark_operators_factory.cc, stoch/stoch_group_baryon.cc: Interface with meson coefficient files 2008-09-23 09:47 edwards * main/colorvec/: baryon_2pt.cc, threequark_contract_ops.cc: Fixed to work on just single time slices. 2008-09-23 09:37 edwards * main/colorvec/: baryon_2pt.cc, deriv_meson_operators.cc, deriv_meson_operators.h, meson_2pt.cc, meson_2pt.ini.xml, prop_obj.cc, prop_obj.h, simple_baryon_operators.cc, simple_baryon_operators.h, simple_meson_operators.cc, simple_meson_operators.h, threequark_operators.cc, threequark_operators.h, twoquark_contract_ops.cc, twoquark_operators.cc, twoquark_operators.h: Changed operators to not be over all time, but only exist on a specific time slice. The parent manages the time slices. 2008-09-23 09:36 tag adat1-40-0 2008-09-23 09:36 edwards * aclocal.m4, configure: Induced changes 2008-09-23 09:33 edwards * NEWS: Info on 1.40.0 2008-09-23 09:33 edwards * configure.ac: Changed to 1.40 2008-09-18 14:15 tag bjoo_debug_tag 2008-09-18 14:15 chen * other_libs/ffdb-lite/src/: AllConfStoreDB.h, ConfDataStoreDB.h, ConfFxDSizeStoreDB.h, ConfVarDSizeStoreDB.h, DBFunc.cpp, DBFunc.h, FFDB.h, Makefile.am, RecnoInfoData.cpp, RecnoInfoData.h: Change DBMerge and DBUpdate using Template 2008-09-17 22:42 edwards * main/colorvec/: baryon_2pt.cc, meson_2pt.cc: Moved around loop over "t" - the time. This cuts the temporaries down to only needed on one time slice. 2008-09-17 16:45 edwards * main/colorvec/meson_2pt.ini.xml: Added more test cases. 2008-09-16 14:53 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, meson_2pt.cc, meson_2pt.ini.xml: Added checks for the number of t0 expected and found. 2008-09-15 23:41 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml: Added in flag for the type of BC used in the props. This should be in the perams. Flip sign of the correlator for crossing an anti-periodic BC boundary. 2008-09-15 16:55 edwards * main/colorvec/baryon_2pt.cc: Added some diagnostic output. 2008-09-15 14:39 edwards * main/colorvec/Makefile.am: Moved baryon_2pt to bin_PROGRAMS 2008-09-15 14:29 edwards * main/sfpcac/run_tune/run_colorvec_baryon_nf3.pl: Changed to 32 vectors. 2008-09-15 10:35 edwards * main/sfpcac/run_tune/colorvec_work.pl: Fixed name of baryon routine. 2008-09-15 10:16 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_baryon_nf3.pl, run_colorvec_meson_nf3.pl, run_colorvec_nf3.pl: Added baryon inputs. 2008-09-14 16:52 edwards * main/colorvec/: baryon_2pt.cc, threequark_contract_ops.cc, threequark_contract_ops.h: Added quark contraction for 123 and 132. 2008-09-13 17:40 edwards * main/colorvec/threequark_contract_ops.cc: Some bug fixes. It might actually be working. 2008-09-12 14:27 edwards * main/colorvec/: simple_baryon_operators.cc, threequark_contract_ops.cc, threequark_operators.cc, threequark_operators.h: Lots of changes. Added proper contractions. Still looks like some bug is lurking in the contractions. However, the operators look fine. Changed how the three-quark ops are represented. No longer expose internal spin indices. They are now fixed as part of the operator. 2008-09-12 14:26 edwards * main/colorvec/baryon_2pt.ini.xml: Changed to 3 vectors. 2008-09-12 14:25 edwards * main/colorvec/: contract_opt.cc, contract_opt.h: Added multiplyAdjAdd. 2008-09-12 14:24 edwards * main/colorvec/: spin_rep.cc, spin_rep.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_operators.h: Changed name of SpinRep to MatrixSpinRep since that's what it is. Added a Rank3SpinRep. 2008-09-12 14:23 edwards * main/colorvec/meson_2pt.cc: Now reads the second prop if the secondQuarkMass is different from the first mass. 2008-09-11 10:21 edwards * main/sfpcac/run_tune/continue_hmc_nf21.pl: Simply continue a Nf=2+1 run. 2008-09-11 10:21 edwards * main/sfpcac/run_tune/colorvec_work.pl: Lower the number of directions in Fmunu 2008-09-09 22:13 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, baryon_elem_op.cc, simple_baryon_operators.cc, simple_baryon_operators.h, threequark_contract_ops.cc, threequark_contract_ops.h: First version of baryon_2pt. 2008-09-09 22:12 edwards * main/colorvec/Makefile.am: Added baryon_elem_op.cc . Moved baryon_2pt to noinst 2008-09-09 21:42 edwards * main/colorvec/meson_2pt.ini.xml: Removed obsolete lattSize and decaydir. 2008-09-09 21:41 edwards * main/colorvec/: hadron_2pt_corr.h, hadron_2pt_corr.cc: Removed use of the Val struct since it is not used. 2008-09-09 15:56 edwards * main/colorvec/: simple_baryon_operators.cc, simple_baryon_operators.h, simple_meson_operators.cc, threequark_dist_obj.cc, threequark_dist_obj.h, threequark_operators.cc, threequark_operators.h: First version of the three-quark routines. Main code needs some more work. 2008-09-09 15:55 edwards * main/colorvec/: Makefile.am, diractodr.cc, diractodr.h: Added diractodr and turned on three quark routines. 2008-09-09 10:17 edwards * main/colorvec/: threequark_contract_ops.cc, threequark_dist_obj.cc, threequark_dist_obj.h, threequark_operators.cc, threequark_operators.h: Working on these. 2008-09-09 10:17 edwards * main/colorvec/baryon_2pt.cc: Start 2008-09-09 10:17 edwards * main/colorvec/: ensem_filenames.cc, ensem_filenames.h, meson_2pt.cc: Changed DBMeson2Pt to DBHadron2Pt. 2008-09-09 10:16 edwards * main/colorvec/: Makefile.am, hadron_2pt_corr.cc, hadron_2pt_corr.h, meson_2pt_corr.cc, meson_2pt_corr.h: Moved meson_2pt_corr to hadron_2pt_corr. 2008-09-06 00:01 edwards * main/sfpcac/run_tune/run_colorvec_read_prop_meson_nf3.pl: Read a colorvec prop. 2008-09-06 00:01 edwards * main/sfpcac/run_tune/colorvec_work.pl: Fixed some paths. Some additional test codes. 2008-09-04 22:02 edwards * main/colorvec/twoquark_contract_ops.cc: Switched another colorvec matrix multiply into a call to multiplyAdd. 2008-09-04 17:23 edwards * main/colorvec/twoquark_operators.cc: Turned off some debugging. 2008-09-04 17:23 edwards * main/colorvec/meson_2pt.cc: Turn off debugging. 2008-09-04 17:22 edwards * main/colorvec/: contract_opt.cc, contract_opt.h, twoquark_contract_ops.cc: Pushed optimizations off to their own file. Start of complex matrix multiply optimizations. 2008-09-04 17:21 edwards * main/colorvec/Makefile.am: Grrh. Typo in filename. 2008-09-04 17:18 edwards * main/colorvec/Makefile.am: Added contract_op.cc 2008-09-04 16:43 edwards * main/colorvec/twoquark_contract_ops.cc: Changed ComplexD+=ComplexD*ComplexD uses to a multiplyAdd. Now can optimize. 2008-09-04 15:20 edwards * main/colorvec/: prop_obj.cc, prop_obj.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_dist_obj.cc, twoquark_dist_obj.h, twoquark_operators.cc, twoquark_operators.h: Rearranged data structures. Now, the colorvector matrix is on the inside. Changed the props to use the twoquark_dist_obj rep. struct. Made a set of rep specific binary multiplication operations. 2008-09-04 10:28 tag adat1-39-0 2008-09-04 10:28 edwards * NEWS: Info on 1.39 2008-09-04 10:27 edwards * aclocal.m4, configure: Induced changes 2008-09-04 10:26 edwards * configure.ac: Changed to 1.39 2008-09-02 14:00 edwards * main/colorvec/avg_pol.pl: Simple averaging of polarizations. 2008-09-02 13:14 edwards * main/colorvec/: baryon_2pt.cc, baryon_elem_op.cc, baryon_elem_op.h, meson_elem_op.h, simple_baryon_operators.cc, simple_baryon_operators.h, threequark_contract_ops.cc, threequark_contract_ops.h, threequark_dist_obj.cc, threequark_dist_obj.h, threequark_operators.cc, threequark_operators.h, threequark_operators_factory.cc, threequark_operators_factory.h, twoquark_dist_obj.h: Seriously starting baryon operators. 2008-09-02 13:13 edwards * main/colorvec/Makefile.am: Split off meson_2pt objects into a generic lib. 2008-09-01 22:38 edwards * main/colorvec/displace.cc: Turn on left - right Nabla. 2008-09-01 22:22 edwards * main/colorvec/deriv_meson_operators.cc: Bug fix in rhoxNABLA_A1. 2008-09-01 11:24 edwards * main/sfpcac/run_tune/colorvec_work.pl: More measurements. 2008-09-01 11:24 edwards * main/sfpcac/autocorr.pl: Windowing algorithm. 2008-08-31 21:47 edwards * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, displace.cc, displace.h, meson_2pt.cc, meson_elem_op.h, prop_obj.cc, prop_obj.h, simple_meson_operators.cc, simple_meson_operators.h, twoquark_operators.cc, twoquark_operators.h: Changed no-displacement to be an empty array. Removed all use of "Nt" in subroutine calls. Now, there is a setting of a lattice size (similar to qdp) which is persistent. The decay_dir is also set. The "Nt" can now be retrieved at any point. 2008-08-31 21:45 edwards * main/colorvec/: Makefile.am, op_params.cc, op_params.h: Added op_params. This allows me to set/get the lattice size. 2008-08-28 14:42 edwards * main/colorvec/meson_2pt.cc: Changed the cache and page sizes for the output corr dbs. 2008-08-28 14:42 edwards * main/colorvec/generate_all_ops.csh: Hacky script to spit out the xml for all the ids 2008-08-28 00:44 edwards * main/colorvec/simple_meson_operators.cc: Fixed the operator name for Gamma9. 2008-08-27 23:44 edwards * main/colorvec/displace.cc: Bug fix in an operator*. Also, make sure to use leftRightNabla for the D and E. However, for the moment, disable the leftNabla just for testing purposes. 2008-08-27 10:13 chen * other_libs/ffdb-lite/src/ConfFxDSizeStoreDB.h: Allow different pagesize for recno database 2008-08-26 14:40 edwards * other_libs/ffdb-lite/src/: ConfFxDSizeStoreDB.h, ConfVarDSizeStoreDB.h: Swapped order of cache_size and pagesize to always be in this order. 2008-08-26 13:43 chen * other_libs/ffdb-lite/src/: ConfFxDSizeStoreDB.h, ConfVarDSizeStoreDB.h: Change Interface to allow specifying pagesize 2008-08-25 14:33 edwards * main/colorvec/deriv_meson_operators.cc: Added all but the state x E operators. 2008-08-24 18:41 edwards * main/colorvec/: deriv_meson_operators.cc, displace.cc, displace.h, meson_2pt.ini.xml, twoquark_operators.cc: More derivative operators. Added the basics. 2008-08-24 18:21 edwards * main/colorvec/key_val_db.h: Neurotic change of comment. 2008-08-24 18:19 edwards * main/colorvec/: baryon_2pt.cc, meson_2pt.cc: Removed some doxygen comments. 2008-08-24 18:19 edwards * main/colorvec/: Makefile.am, antisymtensor.cc, antisymtensor.h, etensor.cc, etensor.h, symtensor.cc, symtensor.h: Added antisymtensor, etensor, symtensor. 2008-08-24 17:08 edwards * main/colorvec/deriv_meson_operators.cc: Added several more derivative operators. 2008-08-24 17:07 edwards * main/colorvec/: displace.cc, displace.h: Added multiply by GammaType (the ensem version of a gamma matrix). 2008-08-24 17:06 edwards * main/colorvec/meson_2pt.cc: Changed a comment. 2008-08-23 23:08 edwards * main/colorvec/twoquark_operators.cc: Added some more debugging stuff. 2008-08-23 00:19 edwards * main/colorvec/meson_2pt.cc: Removed debugging lines. 2008-08-22 23:50 edwards * main/colorvec/: simple_meson_operators.cc, simple_meson_operators.h: Some rearrangeements. 2008-08-22 23:10 edwards * main/colorvec/meson_2pt.ini.xml: Added a0xNABLA_T1. 2008-08-22 23:05 edwards * main/colorvec/: deriv_meson_operators.h, deriv_meson_operators.cc: Removed deriv_length. 2008-08-22 22:49 edwards * main/colorvec/: deriv_meson_operators.cc, deriv_meson_operators.h, displace.cc, displace.h, map_obj.h, meson_2pt.cc, op_params.h, simple_meson_operators.cc, simple_meson_operators.h, spin_rep.cc, spin_rep.h, twoquark_operators.cc, twoquark_operators.h, twoquark_operators_factory.cc: Added first derivative operators with displacements. 2008-08-22 22:48 edwards * main/colorvec/Makefile.am: Added deriv_meson_operators.cc 2008-08-22 22:44 edwards * main/sfpcac/qpot_exp_fit.cc: Added plotting capabilities. Also updated data covariance support. 2008-08-22 22:41 edwards * include/formfac/formfac_data_covar.h: Moved using namespace declaration. 2008-08-22 22:41 edwards * include/ensem/ensem_params.h: Added ifdef guards. 2008-08-22 00:52 edwards * main/colorvec/: Makefile.am, deriv_meson_operators.cc, deriv_meson_operators.h, displace.cc, displace.h: First version of derivative operators. 2008-08-21 13:44 edwards * main/colorvec/: meson_2pt.cc, prop_obj.cc, prop_obj.h: Changed storage order for props. Now, read an entire NxN matrix for each spin source&sink. 2008-08-19 18:18 edwards * main/sfpcac/qpot_exp_fit.cc: Fixed up plots. 2008-08-19 17:42 edwards * main/sfpcac/qpot_exp_fit.cc: Put in some more plots. 2008-08-19 17:21 edwards * main/sfpcac/qpot_exp_fit.cc: Added some file printing. 2008-08-19 17:07 edwards * main/sfpcac/: qpot_exp_fit.cc, qpot_fit.cc: Switched to new struct returned from data_covar. 2008-08-19 03:33 edwards * main/colorvec/: meson_2pt.cc, prop_obj.h: Switched to using a fixed size prop db. 2008-08-19 03:29 edwards * main/colorvec/prop_obj.h: Fixed up prop db. 2008-08-19 03:25 edwards * main/colorvec/prop_obj.h: Changed to a fixed size DB. 2008-08-18 23:11 edwards * main/sfpcac/run_tune/colorvec_work.pl: Added a prop_read function. 2008-08-18 14:00 edwards * main/colorvec/Makefile.am: Always build and install meson_2pt 2008-08-18 12:54 edwards * include/formfac/: formfac_manage_3pt.h, formfac_manage_3pt_bb.h, formfac_manage_3pt_cache.h, formfac_manage_3pt_db.h, formfac_manage_3pt_stripped.h: Split off the cache part from formfac_manage_3pt 2008-08-18 12:54 edwards * include/Makefile.am: Split added formfac_manage_3pt_cache.h 2008-08-18 12:53 edwards * lib/: Makefile.am, formfac/formfac_manage_3pt.cc, formfac/formfac_manage_3pt_cache.cc: Split apart the cache part from formfac_manage_3pt 2008-08-18 11:52 bjoo * other_libs/xpath_reader/lib/xml_simplewriter.cc: Removed flushing and endls in XMLSimplewriter 2008-08-17 23:20 edwards * main/sfpcac/run_tune/colorvec_work.pl: Fixed sub call to rand. 2008-08-17 23:17 edwards * main/sfpcac/run_tune/run_colorvec_save_prop.pl: Changed filenames slightly. 2008-08-17 23:13 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_meson_nf3.pl, run_colorvec_nf3.pl, run_colorvec_save_prop.pl: Put in pseudo-random translation of t_sources. 2008-08-17 23:13 edwards * main/sfpcac/run_tune/rannyu.pl: First crack at a version of rannyu. 2008-08-17 22:08 edwards * main/sfpcac/run_tune/: colorvec_work.pl, run_colorvec_meson_nf3.pl, run_colorvec_nf3.pl, run_colorvec_save_prop.pl: Extracted common routines into a work script. 2008-08-17 21:56 edwards * main/sfpcac/run_tune/: run_colorvec_meson_nf3.pl, run_colorvec_save_prop.pl: New versions. 2008-08-14 11:38 edwards * main/colorvec/meson_2pt.cc: Turn off printing the temporary correlator. 2008-08-14 11:30 edwards * main/colorvec/: meson_2pt.cc, simple_meson_operators.cc, twoquark_contract_ops.cc, twoquark_operators.cc: Turned off some debugging output. 2008-08-13 23:08 edwards * main/colorvec/: simple_meson_operators.cc, simple_meson_operators.h, twoquark_contract_ops.cc, twoquark_operators.cc, twoquark_operators.h: Abstract out a structure holding the displacements and spins that are used. There is now one virtual constructor at the base class level that is used for initializing the two-quark op representation. A big simplification. Adding new mesons is now simple - just create a displacement and sparse spin representation. 2008-08-13 23:06 edwards * main/colorvec/Makefile.am: Added twoquark_operators.cc 2008-08-13 16:43 edwards * main/colorvec/: baryon_elem_op.cc, baryon_elem_op.h, meson_2pt.cc, meson_2pt.ini.xml, meson_2pt_corr.h, prop_obj.cc, prop_obj.h, simple_meson_operators.cc, simple_meson_operators.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_dist_obj.cc, twoquark_dist_obj.h, twoquark_operators.cc, twoquark_operators.h: Overhauled the two quark operator representation. Pulled out the spins - had to rearrange time. Now have just spins from meson ops multiplying props to form a temporary for each displacement. This cuts down significantly on flops. Changed meson_2pt main code to always write single configuration correlator DB's. Can now optionally write out ensemble files. The code thus works something like a single config stripper. Will need something to merge all the single config corrs at the end to make and ensemble DB (like in the package ffdb). 2008-08-13 16:40 edwards * main/colorvec/: Makefile.am, ensem_filenames.cc, ensem_filenames.h, spin_rep.cc, spin_rep.h: Added spin_rep and ensem_filenames. 2008-08-13 15:36 tag adat1-38-0 2008-08-13 15:36 edwards * NEWS: Info on 1.38. 2008-08-13 15:35 edwards * aclocal.m4, configure: Induced changes 2008-08-13 15:34 edwards * configure.ac: Changed to 1.38 2008-08-13 12:03 edwards * main/colorvec/meson_2pt.cc: Removed ifdef around 2ptcorr key. 2008-08-12 22:33 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Added orthog_basis to meson. 2008-08-12 22:17 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Changed to have both props in the same file. 2008-08-12 14:16 edwards * main/colorvec/: meson_2pt.cc, meson_2pt.ini.xml, simple_meson_operators.cc, simple_meson_operators.h: Added support for more operators. 2008-08-12 13:37 chen * other_libs/ffdb-lite/src/: DBString.cpp, DBString.h, RecnoData.cpp, RecnoData.h, RecnoKey.cpp, RecnoKey.h: Using new interface 2008-08-12 13:37 chen * other_libs/ffdb-lite/src/DBFunc.h: Add appendRecnoData 2008-08-12 13:37 chen * other_libs/ffdb-lite/src/DBCursor.h: Remove unnecessary code 2008-08-12 13:25 chen * other_libs/ffdb-lite/src/ConfFxDSizeStoreDB.h: Fix using new interface 2008-08-12 00:26 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Added missing mass_label 2008-08-11 23:30 edwards * main/colorvec/: prop_obj.cc, simple_meson_operators.cc: Some bug fixes. Fixed prop adjointing. Made the pion actually a pion. All seems to work. 2008-08-11 23:26 edwards * main/colorvec/twoquark_contract_ops.cc: Some more debugging output. 2008-08-11 23:24 edwards * main/colorvec/meson_2pt.cc: Some more debugging. 2008-08-11 23:23 edwards * main/colorvec/Makefile.am: Moved meson_2pt back to noinst. 2008-08-11 01:38 edwards * main/colorvec/meson_2pt.cc: Removed unnecessary bin_t0_corrs array. 2008-08-11 01:37 edwards * main/colorvec/prop_obj.cc: Had a missing transpose. 2008-08-11 01:37 edwards * main/colorvec/simple_meson_operators.cc: Fixed convertSpin and another bug in construct. Have debugging that needs to be removed. 2008-08-10 22:57 edwards * main/colorvec/: meson_2pt.cc, prop_obj.cc, prop_obj.h: Fixed up gamma5Herm. 2008-08-10 17:14 edwards * main/colorvec/: meson_2pt.cc, simple_meson_operators.cc, simple_meson_operators.h, twoquark_operators.h: Pushed momentum into the "construct" call. Now seems to run. 2008-08-10 17:12 edwards * main/colorvec/meson_2pt_corr.h: Changed value type in DBMap to just an EnsemVectorComplex. 2008-08-10 17:11 edwards * main/colorvec/map_obj.h: Added Setter. 2008-08-10 17:09 edwards * main/colorvec/meson_elem_op.cc: Added missing read and write of type_of_data in binaryreader/writer. 2008-08-10 01:50 edwards * main/colorvec/: meson_2pt.cc, meson_2pt.ini.xml, meson_elem_op.h, simple_meson_operators.cc, simple_meson_operators.h, twoquark_operators.cc, twoquark_operators.h, twoquark_operators_factory.cc: Compiles and runs, but not working ye. 2008-08-10 01:49 edwards * main/colorvec/Makefile.am: Added simple_meson_operators.cc and twoquark_operators_factory.cc 2008-08-07 23:39 edwards * main/colorvec/: meson_2pt.cc, meson_2pt.ini.xml, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_operators.h: Compiles and runs, but missing functionality. 2008-08-07 17:56 edwards * main/colorvec/: meson_2pt.cc, meson_elem_op.cc, meson_elem_op.h, prop_obj.cc, prop_obj.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_dist_obj.cc, twoquark_dist_obj.h, twoquark_operators.h, twoquark_operators_factory.h: More changes. Still working on it. 2008-08-07 17:00 edwards * main/colorvec/: baryon_2pt.cc, baryon_elem_op.cc, key_val_db.h, map_obj.h, meson_2pt.cc, meson_2pt.ini.xml, meson_2pt_corr.cc, meson_2pt_corr.h, meson_elem_op.cc, meson_elem_op.h, prop_obj.cc, prop_obj.h, twoquark_contract_ops.cc, twoquark_contract_ops.h, twoquark_dist_obj.cc, twoquark_dist_obj.h, twoquark_operators.h, twoquark_operators_factory.cc, twoquark_operators_factory.h: First crack at a complete rewrite of the meson_2pt contraction code, and a bit of work on the baryon. The code has now switched to using the DB routines in ffdb-lite. Now, have (the start) of factories for the operators. Try to use lots of temporaries to cut down on flops in the contractions. 2008-08-07 16:58 edwards * main/colorvec/Makefile.am: Moved meson_2pt to EXTRA. 2008-08-06 19:59 edwards * lib/io/adat_xml_group_reader.cc, include/io/adat_xml_group_reader.h: Added readXMLArrayGroup. 2008-08-06 18:49 tag adat1-37-0 2008-08-06 18:49 edwards * aclocal.m4, configure: Induced changes 2008-08-06 18:49 edwards * configure.ac: Changed to 1.37 2008-08-06 18:49 edwards * NEWS: Info on 1.37.0 2008-08-06 16:45 edwards * main/colorvec/: meson_2pt_corr.cc, meson_2pt_corr.h: First version. Can read or write keys and values of meson 2pt correlators. The idea is to support both MapObject and FFDB. 2008-08-06 13:39 edwards * main/colorvec/key_val_db.h: Serializable wrappers for structs. 2008-08-06 13:15 edwards * aclocal.m4, configure: Induced changes 2008-08-06 13:15 edwards * configure.ac, main/colorvec/Makefile.am, other_libs/Makefile.am: Added support for ffdb-lite. 2008-08-05 22:14 edwards * main/sfpcac/autocorr.pl: Added some fixes and changed slightly how the windowing cutoff is checked. 2008-08-05 21:45 edwards * main/sfpcac/autocorr.pl: Computes a windowing integrated autocorrelation time. 2008-08-04 23:46 edwards * other_libs/ffdb-lite/src/Makefile.am: Added some missing include files from include_HEADERS. 2008-08-04 12:34 chen * other_libs/ffdb-lite/src/: FFDB.cpp, FFDB.h: Add my own byte swapping code 2008-08-04 00:06 edwards * other_libs/ffdb-lite/src/: ConfDataStoreDB.h, ConfFxDSizeStoreDB.h, ConfVarDSizeStoreDB.h: Pushed all concrete data from the base class down into the derived classes. Now, the parent is abstract, but has some default functions that act on pointers returned by the children. Added open and close functions and empty constructors. The purpose of all this is so that qdp++ can call these functions only on the primary node. 2008-08-03 22:06 edwards * other_libs/ffdb-lite/: aclocal.m4, configure: Induced changes 2008-08-02 20:17 chen * other_libs/ffdb-lite/configure.ac: Add check endian flag 2008-08-02 20:16 chen * other_libs/ffdb-lite/src/Makefile.am: Add FFDB_BYTE_ORDER 2008-08-02 17:24 edwards * other_libs/ffdb-lite/: aclocal.m4, configure: Induced changes 2008-08-02 16:28 edwards * other_libs/ffdb-lite/src/Serializable.h: Changed some comments. 2008-08-02 16:27 edwards * other_libs/ffdb-lite/src/DBCursor.h: Changed get_next_key to new semantics. 2008-08-02 16:26 edwards * other_libs/ffdb-lite/src/DBFunc.h: Fixed some comments. 2008-08-02 16:26 edwards * other_libs/ffdb-lite/src/ConfFxDSizeStoreDB.h: Added include of RecnoKey and RecnoData.h 2008-08-02 16:25 edwards * other_libs/ffdb-lite/src/ConfDataStoreDB.h: Removed unneeded include of RecnoKey and Data include files. 2008-08-02 16:24 edwards * other_libs/ffdb-lite/src/DBString.h: Removed include of inet.h 2008-08-02 16:05 edwards * other_libs/ffdb-lite/src/: ConfDataStoreDB.cpp, ConfDataStoreDB.h, ConfFxDSizeStoreDB.h, DBFunc.h, DBString.cpp, DBString.h, Serializable.h: Changed readObject and writeObject semantics to instead take input and output buffers from the caller instead of a private internal buffer within the object itself. 2008-08-02 16:00 edwards * other_libs/ffdb-lite/src/ConfVarDSizeStoreDB.h: I think this is a bug fix. Changed the return type of "get". 2008-07-31 20:33 tag FFDB-0-9-0 2008-07-31 20:33 chen * other_libs/ffdb-lite/: configure.ac, src/FFDB.h: port to FC9 2008-07-25 09:32 chen * other_libs/ffdb-lite/src/: ConfDataStoreDB.h, ConfFxDSizeStoreDB.h, ConfVarDSizeStoreDB.h, Makefile.am: Change ConfDataStoreDB to a base class add tw subclasses: one for fixsize data the other for variable size data 2008-07-23 17:29 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Fixed task name. 2008-07-23 17:27 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Added tests for system calls. 2008-07-23 17:25 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Fixed names of prop_id. 2008-07-23 17:23 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Updated for new prop_matelem input. Added both light and strange quark mass props. 2008-07-23 17:11 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Added extract_params. 2008-07-23 17:10 edwards * main/sfpcac/run_tune/queue_arch_type_maui.pl: Added qcd8n 2008-07-23 17:10 edwards * main/sfpcac/run_tune/pbs_strip_per_avg_mixed_valence.pl: Fixed a bug. 2008-07-23 17:10 edwards * main/sfpcac/run_tune/pbs_strip_driver.pl: Some fixes. 2008-07-18 18:00 edwards * main/colorvec/baryon_2pt.cc: Carried over more stuff from meson_2pt. 2008-07-18 18:00 edwards * main/colorvec/meson_2pt.cc: Some indenting. 2008-07-18 17:33 edwards * main/colorvec/: meson_elem_op.cc, meson_elem_op.h: Small changes. 2008-07-18 17:32 edwards * main/colorvec/: Makefile.am, baryon_2pt.cc, baryon_elem_op.cc, baryon_elem_op.h: Split off more routines. 2008-07-18 17:10 edwards * main/colorvec/: Makefile.am, map_obj.h, meson_2pt.cc, meson_elem_op.cc, meson_elem_op.h, prop_obj.h: Split off more parts into separate files. 2008-07-18 11:52 edwards * main/colorvec/: baryon_2pt.cc, baryon_2pt.ini.xml, threequark_operators_factory.h, twoquark_operators.cc, twoquark_operators.h, twoquark_operators_factory.h: First versions. 2008-07-18 11:52 edwards * main/colorvec/meson_2pt.cc: Pull out some routines map_obj and prop_obj 2008-07-18 11:51 edwards * main/colorvec/: map_obj.h, prop_obj.cc, prop_obj.h: Split off to separate files. 2008-07-18 11:50 edwards * main/colorvec/Makefile.am: Added new routines and a baryon_2pt.cc 2008-07-15 00:52 edwards * main/colorvec/meson_2pt.cc: Changed to all 16 single-site gamma matrices. 2008-07-14 23:50 edwards * main/colorvec/meson_2pt.cc: Converted to a hybrid. 2008-07-11 08:11 edwards * main/sfpcac/run_tune/run_hmc.pl: Removed RPC timeout checks. 2008-07-09 08:06 tag qdp1-28-0 2008-07-09 08:06 edwards * other_libs/xpath_reader/include/: xml_array.h, xml_array2d.h, xml_array3d.h: Bug fix in operator-() [the unary operator]. It was modifying the source and returning it, rather than making a new destination field that is the negation. 2008-07-08 22:58 edwards * main/colorvec/meson_2pt.cc: Turn on all gamma matrices in loop. Slight change in how momenta is handled. Still need an overhaul. 2008-07-07 16:58 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Changed to use only light quark mass. 2008-07-07 16:51 edwards * main/sfpcac/run_tune/launch_pbs_jobs_work.pl: Set starting config to 1000. 2008-07-07 16:50 edwards * main/sfpcac/run_tune/extend_pbs_jobs_work.pl: Set starting config to 400. 2008-07-07 16:50 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Set blocking to be 1. 2008-07-07 16:49 edwards * main/sfpcac/run_tune/: pbs_strip_driver.pl, pbs_strip_per_avg_mixed_valence.pl, pbs_strip_work.csh: Can run something like strip_hadspec in the pbs queues. Saves only the tarball for each config. 2008-07-07 13:49 chen * other_libs/ffdb-lite/src/ConfDataStoreDB.h: remove warning about signed and unsigned 2008-07-05 22:16 edwards * main/colorvec/meson_2pt.cc: Rewrote contraction part using matrix temporaries to speed it up. 2008-07-04 23:41 edwards * main/colorvec/meson_2pt.cc: Changed a comment. 2008-07-03 14:47 chen * other_libs/ffdb-lite/src/: ConfDataStoreDB.h, DBFunc.cpp, DBFunc.h, Makefile.am, RecnoData.cpp, RecnoData.h, RecnoKey.cpp, RecnoKey.h: New implementation 2008-07-03 11:48 kostas * include/covfit/fitters/: chiPT_fKofPi.h, chiPT_mKomPi.h: [no log message] 2008-07-03 11:45 kostas * main/: Makefile.am, fitters/Makefile.am, fpi/Makefile.am, mres/Makefile.am, spectrum/Makefile.am, utils/Makefile.am: tt 2008-07-01 00:01 edwards * main/colorvec/meson_2pt.cc: Commented out some debugging. Inserted some more print statements. 2008-06-29 23:27 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: Fixed path name. 2008-06-29 23:12 edwards * main/sfpcac/run_tune/run_colorvec_nf3.csh: Do not need. 2008-06-29 23:10 edwards * main/sfpcac/run_tune/run_colorvec_nf3.pl: First version of a script writer for colorvector matrix elements. 2008-06-29 22:35 edwards * main/sfpcac/run_tune/run_colorvec_nf3.csh: First start of a colorvec driver script. 2008-06-29 16:48 edwards * main/colorvec/meson_2pt.cc: Fixed to use the appropriate dagger of the antiquark in the contraction. 2008-06-28 23:07 edwards * main/colorvec/: meson_2pt.cc, meson_2pt.ini.xml: Optimized where lime files are read. Now read a propagator and meson lime file. 2008-06-28 12:10 edwards * main/colorvec/meson_2pt.cc: Fixed reading of meson elem ops. Seems to work. 2008-06-28 11:43 edwards * include/ensem/ensem_ensem.h: Added peekSpin. 2008-06-27 09:10 dudek * main/formfac/pion_src_pion_proj_snk.cc: separated ZV for spatial and temporal 2008-06-27 09:04 dudek * main/formfac/: Makefile.am, pion_src_pion_proj_snk.cc, rho_src_pion_proj_snk.cc: first attempt at a rho-pion_proj fitter 2008-06-27 02:14 edwards * main/colorvec/meson_2pt.cc: Now compiles and sort of runs. 2008-06-26 00:56 edwards * main/colorvec/meson_2pt.cc: Put in a place-holder for "main". 2008-06-24 14:43 chen * other_libs/ffdb-lite/src/: DBFunc.cpp, DBFunc.h: removing apps directory 2008-06-23 13:53 edwards * main/colorvec/meson_2pt.cc: First non-working version. 2008-06-23 13:50 edwards * aclocal.m4, configure: Induced changes 2008-06-23 13:50 edwards * configure.ac, main/Makefile.am, main/colorvec/Makefile.am, main/fitters/Makefile.am, main/formfac/Makefile.am, main/fpi/Makefile.am, main/mres/Makefile.am, main/sfpcac/Makefile.am, main/spectrum/Makefile.am, main/stoch/Makefile.am, main/ttt/Makefile.am, main/utils/Makefile.am: Added colorvec/Makefile.am. Changed all bin_PROGRAMS to noinst_PROGRAMS. There are so many of the critters. 2008-06-18 00:10 edwards * main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh: Changed paths. 2008-06-18 00:09 edwards * main/sfpcac/run_tune/: pbs_strip_per_avg_mixed_valence.pl, pbs_strip_per_avg_mixed_valence_work.csh, strip_per_avg_mixed_valence_cache.csh: New versions to strip and avg via pbs. 2008-06-17 17:19 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Added qcd8n. 2008-06-17 10:50 edwards * other_libs/ffdb-lite/config/: config.guess, config.sub, depcomp, install-sh, missing: Added config files. 2008-06-17 10:23 bjoo * other_libs/xpath_reader/include/xml_array.h: Added some new std libraryisms - declared exit from cstdlib to keep my gcc-4.3 happy 2008-06-16 08:58 dudek * include/formfac/formfac_meson_fit.h, include/formfac/formfac_qsq.h, lib/formfac/formfac_bb.cc, lib/formfac/formfac_meson_fit.cc, lib/formfac/formfac_qsq.cc, main/formfac/pion_src_pion_proj_snk.cc: added some commented diagonostic std::cout's 2008-06-16 00:19 edwards * other_libs/ffdb-lite/src/: ConfDataStoreDB.h, DBCursor.h, DBData.h, DBFunc.h, DBKey.h, DBString.h, FFDB.h, Serializable.h: Added emacs controls to throw into C++ mode. 2008-06-15 23:54 edwards * other_libs/ffdb-lite/: aclocal.m4, configure: Induced changes 2008-06-15 23:54 edwards * other_libs/ffdb-lite/configure.ac: Changed AC_CONFIG_SRCDIR to AC_CONFIG_AUX_DIR 2008-06-15 12:31 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Added link to xi_st. 2008-06-13 16:33 dudek * include/formfac/formfac_data_covar.h, include/formfac/formfac_ensem_linfit.h, include/formfac/formfac_linear_covar_genfit.h, include/formfac/formfac_solver.h, lib/formfac/formfac_chisqq.cc, lib/formfac/formfac_data_covar.cc, lib/formfac/formfac_ensem_linfit.cc, lib/formfac/formfac_linear_covar_genfit.cc, lib/formfac/formfac_manage_3pt_bb.cc, lib/formfac/formfac_solver.cc, main/formfac/ff_driver.cc, main/formfac/pion_src_pion_proj_snk.cc: fixed previous accidental commital of old versions 2008-06-13 15:49 edwards * include/formfac/formfac_manage_3pt.h: Switched back to include of lime.h since I'm not getting their forward decls correct. 2008-06-13 14:50 dudek * include/formfac/formfac_data_covar.h, include/formfac/formfac_ensem_linfit.h, include/formfac/formfac_linear_covar_genfit.h, include/formfac/formfac_solver.h, lib/formfac/formfac_chisqq.cc, lib/formfac/formfac_data_covar.cc, lib/formfac/formfac_ensem_linfit.cc, lib/formfac/formfac_linear_covar_genfit.cc, lib/formfac/formfac_manage_3pt_bb.cc, lib/formfac/formfac_solver.cc, main/formfac/ff_driver.cc, main/formfac/pion_src_pion_proj_snk.cc: merged in the changes to the formfac code ??? 2008-06-13 10:58 dudek * include/formfac/formfac_ensem_linfit.h, include/formfac/formfac_linear_covar_genfit.h, include/formfac/formfac_solver.h, lib/formfac/formfac_chisqq.cc, lib/formfac/formfac_ensem_linfit.cc, lib/formfac/formfac_linear_covar_genfit.cc, lib/formfac/formfac_manage_3pt_bb.cc, lib/formfac/formfac_solver.cc, main/formfac/pion_src_pion_proj_snk.cc: Changed the phase definition for q: Now equal to pi-pf rather than pf-pi. Matches with the chroma code. Change made in the cache file reader. Also changed the conserved current to match this phase - improvement term not yet corrected. plus assorted charges elsewhere 2008-06-13 10:56 edwards * include/formfac/formfac_manage_3pt.h: Added forward decl for LimeWriter. 2008-06-11 23:37 edwards * main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh: Went back to version that does not change sigma to xi. The file names are correct in this case, but the problem is the script itself. Now use the correct path to the "hl" files and dir. 2008-06-11 17:33 edwards * main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh: Bummer. Fixed the renaming of xi and xi_st to now use the correct (corresponding) operators. 2008-06-11 10:10 edwards * include/formfac/formfac_manage_3pt.h: Removed explicit include of lime.h and switched to a forward decl for LimeReader. 2008-06-11 09:54 dudek * main/formfac/: ff_driver.cc, pion_src_pion_proj_snk.cc: sundry minor changes 2008-06-10 09:29 dudek * include/formfac/formfac_data_covar.h, lib/formfac/formfac_data_covar.cc, lib/formfac/formfac_solver.cc: data covariance inverse packaged into a struct ndof now takes account of how many singular values you rest in the data and in the linear solution makes chisq/ndof and Q somewhat more believable 2008-06-10 07:22 dudek * lib/formfac/formfac_data_covar.cc, lib/formfac/formfac_ensem_linfit.cc, lib/formfac/formfac_solver.cc, main/formfac/pion_src_pion_proj_snk.cc: Various small fixes 2008-06-09 18:03 edwards * main/sfpcac/run_tune/queue_arch_type_maui.pl: Fixed sed. 2008-06-09 14:32 edwards * main/sfpcac/: data_covar.cc, data_covar.h, linear_covar_genfit.cc, linear_covar_genfit.h, qpot_exp_fit.cc: Changed qpot_exp_fit to use the data_covariance that have been moved to lib/formfac. 2008-06-09 14:31 edwards * main/sfpcac/Makefile.am: Moved out data covariance and fit routines from qpot_exp_fit. 2008-06-09 13:45 edwards * lib/formfac/formfac_solver.cc: Fixed asserts 2008-06-09 13:44 edwards * lib/formfac/formfac_solver.cc: Fixed asserts. 2008-06-09 12:31 edwards * include/formfac/formfac_ensem_linfit.h, include/formfac/formfac_solver.h, lib/formfac/formfac_ensem_linfit.cc, lib/formfac/formfac_solver.cc: Changed formfac_solver to use linear fit with covariance support routines. 2008-06-09 12:29 edwards * main/formfac/ff_driver.cc: Changed ff_driver to use new formfac solver functions. 2008-06-09 12:29 edwards * main/formfac/Makefile.am: Induced changes 2008-06-09 11:20 edwards * include/formfac/formfac_chisqq.h, include/formfac/formfac_data_covar.h, include/formfac/formfac_ensem_linfit.h, include/formfac/formfac_linear_covar_genfit.h, include/formfac/formfac_solver.h, lib/formfac/formfac_chisqq.cc, lib/formfac/formfac_data_covar.cc, lib/formfac/formfac_ensem_linfit.cc, lib/formfac/formfac_linear_covar_genfit.cc: New linear fit with data covariance 2008-06-09 11:19 edwards * include/Makefile.am, lib/Makefile.am: Added formfac_chisqq, formfac_data_covar, formfac_ensem_linfit, formfac_linear_covar_genfit 2008-06-09 11:17 edwards * include/ensem/ensem_primscalar.h: Added an isZero function. 2008-06-09 10:08 edwards * include/formfac/formfac_solver.h: Added a default function for isRowZero. 2008-06-09 10:07 edwards * include/ensem/ensem_simpleword.h: Changed 0 to 0.0 in isZero. 2008-06-09 09:57 edwards * main/formfac/Makefile.am: Added a lib dependency on noinst_PROGRAMS 2008-06-09 09:53 dudek * include/formfac/formfac_manage_3pt.h, include/formfac/formfac_solver.h, lib/formfac/formfac_solver.cc, main/formfac/pion_src_pion_proj_snk.cc: added all-zero matrix element checking into LLSq base class added correlator covariance construction into least squares solver modified eigenvector projected 3pt fitting for pi-pi - temporal conserved current is now symmetric like the spatial 2008-06-08 23:25 edwards * main/sfpcac/run_tune/queue_arch_type_maui.pl: Added ranger. 2008-06-08 23:22 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_eigcg_per.pl: Switched to 24^3. 2008-06-07 17:53 edwards * other_libs/ffdb-lite/configure: Induced changes. 2008-06-07 17:52 edwards * other_libs/ffdb-lite/ffdblite-config.in: Start of a config script. 2008-06-07 17:51 edwards * other_libs/ffdb-lite/aclocal.m4: Induced changes 2008-06-07 17:50 edwards * other_libs/ffdb-lite/: Makefile.am, configure.ac, src/Makefile.am: Getting it work again. 2008-06-07 14:31 edwards * include/ensem/: ensem_ensem.h, ensem_obsmatrix.h, ensem_obsscalar.h, ensem_obstensor.h, ensem_obsvector.h, ensem_reality.h, ensem_simpleword.h: Added an isZero function. 2008-06-07 14:24 edwards * other_libs/ffdb-lite/configure: Induced changes. 2008-06-07 14:24 edwards * other_libs/ffdb-lite/configure.ac: Added some msg notices. 2008-06-07 01:01 edwards * include/formfac/formfac_ensemble.h, lib/formfac/formfac_ensemble.cc: Added parameters to AnisoParam. 2008-06-07 00:55 edwards * aclocal.m4, configure: Induced changes 2008-06-07 00:55 edwards * main/formfac/: Makefile.am, pion_src_pion_proj_snk.cc: Added pion_src_pion_proj_snk. 2008-06-06 23:04 edwards * main/stoch/stoch_group_baryon.cc: Did some indenting. 2008-06-04 10:35 edwards * main/formfac/: build_currents.cc, build_currents.ini.xml: First version to read manage object and build derivatives. 2008-06-04 10:33 edwards * lib/formfac/formfac_manage_3pt.cc: Added reading/writing of src_name and snk_name in 3Pt arg. 2008-06-03 22:37 edwards * adat-config.in: Added some more libs. 2008-06-03 22:28 edwards * adat-config.in: Added more arguments in CXXFLAGS and LIBS. 2008-06-03 14:23 chen * other_libs/ffdb-lite/src/ConfDataStoreDB.cpp: Add ConfDataStoreDB.cpp 2008-06-03 12:25 chen * include/Makefile.am: Install more headers of formac 2008-06-03 09:45 chen * lib/formfac/formfac_manage_3pt.cc: Add src_name and snk_name compare in the equivalence operator 2008-06-02 22:49 kostas * aclocal.m4, configure, main/strippers/strip_mres.cc: fixed mres stripper 2008-06-02 16:10 chen * other_libs/ffdb-lite/src/: ConfDataStoreDB.h, DBString.cpp, DBString.h, Makefile.am: First try to put into production 2008-05-30 00:54 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_eigcg_per.pl: Changed to use origins at 8 8 8. 2008-05-29 15:31 tag FFDB 2008-05-29 15:31 chen * other_libs/ffdb-lite/: AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, aclocal.m4, configure, configure.ac, src/ConfDataStoreDB.h, src/DBCursor.cpp, src/DBCursor.h, src/DBData.h, src/DBFunc.cpp, src/DBFunc.h, src/DBKey.h, src/DBString.cpp, src/DBString.h, src/FFDB.cpp, src/FFDB.h, src/Makefile.am, src/Serializable.h: Initial CVS import of FFDB 2008-05-29 15:31 chen * other_libs/ffdb-lite/: AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, aclocal.m4, configure, configure.ac, src/ConfDataStoreDB.h, src/DBCursor.cpp, src/DBCursor.h, src/DBData.h, src/DBFunc.cpp, src/DBFunc.h, src/DBKey.h, src/DBString.cpp, src/DBString.h, src/FFDB.cpp, src/FFDB.h, src/Makefile.am, src/Serializable.h: Initial revision 2008-05-25 22:29 edwards * main/sfpcac/run_tune/spec_per_work_eigcg.pl: Switched to using explicit coordinates for t_srce. 2008-05-25 22:29 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_eigcg_per.pl: Bug fix in t_src. 2008-05-23 22:53 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_eigcg_per.pl: Added an origin. 2008-05-23 22:51 edwards * main/sfpcac/run_tune/launch_pbs_jobs_work.pl: Switched back to JLabLQCD. 2008-05-23 22:50 edwards * main/sfpcac/run_tune/spec_per_work_eigcg.pl: Added new origin. 2008-05-14 14:58 tag qdp1-27-0 2008-05-14 14:58 bjoo * other_libs/xpath_reader/include/xml_struct_writer.h: Another little clean. Should now be ready for gcc-4.3 2008-05-13 11:31 kostas * main/strippers/strip_hadspec.cc: fix bug 2008-05-13 11:30 kostas * main/strippers/strip_hadspec.cc: handling different source smearing 2008-05-09 03:58 edwards * main/sfpcac/run_tune/: launch_pbs_jobs_work.pl, run_all_light_qpot_work.pl, run_light_qpot_per.pl, run_mixed_valence_spec_eigcg_per.pl, spec_per_work_eigcg.pl, strip_per_avg_mixed_valence.csh: Latest changes 2008-04-25 00:35 edwards * main/stoch/: stoch_group_meson.cc, stoch_group_meson.ini.pl: Now seems to run. Need to fix sanity checks. 2008-04-25 00:09 edwards * main/stoch/Makefile.am: Added stoch_group_baryon.cc 2008-04-25 00:07 edwards * main/stoch/stoch_group_meson.cc: First version. 2008-04-24 11:51 jbulava * main/stoch/make_stoch_group_baryon_input.pl: Added perl script to make xml input for stoch_group_baryon 2008-04-24 11:47 jbulava * main/stoch/stoch_group_baryon.cc: updated stoch_group_baryon 2008-04-17 18:28 edwards * main/sfpcac/: extract_r0_mixed.pl, sub_extract_r0_mixed.pl: Pull out r0 for mixed lattices. 2008-04-17 18:27 edwards * main/sfpcac/run_tune/: generate_nf21_syz.pl, generate_nf21_syz_largevol.pl, generate_nf3_sp.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol_taditer_unprec.pl, generate_nf3_syz_taditer.pl, generate_nf3_syz_tree.pl: Added missing "version" tag for the smeared potential measurements. 2008-04-16 22:31 kostas * include/covfit/statistics.h: added bootstrap error 2008-04-08 12:17 jbulava * adat-config.in: Fixed bug in adat-config 2008-04-07 17:34 edwards * main/sfpcac/run_tune/: build_unsmeared_wloops_xml.pl, concat_wilslp_xml.pl: Updates. 2008-04-07 17:19 edwards * main/sfpcac/run_tune/: build_smeared_wloops_xml.pl, concat_wilslp_xml.pl: Fixes. 2008-04-07 17:08 edwards * main/sfpcac/run_tune/concat_wilslp_xml.pl: Replace KGlob with my own version. 2008-04-07 17:00 edwards * main/sfpcac/run_tune/: build_smeared_wloops_xml.pl, concat_wilslp_xml.pl: First versions. 2008-04-07 16:30 uid6250 * Makefile.am, adat-config.in, configure, configure.ac, main/stoch/stoch_group_baryon.cc: Made changes necessary for adat-config 2008-04-07 15:52 uid3790 * main/sfpcac/extract_r0.pl: Dropped old r0 method and use new method. 2008-04-07 15:48 uid3790 * main/sfpcac/: qpot_exp_fit_params.cc, qpot_exp_fit_params.h, qpot_fit.cc, qpot_fit.ini.xml: Added ability to use only planar Wilson loops. 2008-04-07 14:59 edwards * main/sfpcac/qpot_fit.cc: Removed some unused code. 2008-04-07 11:31 edwards * other_libs/minuit/test/: MnSim/Makefile.am, MnTutorial/Makefile.am: Fixed library path. 2008-04-07 11:30 edwards * other_libs/minuit/INSTALL: Added missing file. 2008-03-31 09:59 edwards * main/sfpcac/run_tune/: tune_remez.pl, tune_remez_nf21.pl: Turned off completely the safety bounds feature. The current algorithm will always increase the bounds geometrically. 2008-03-31 09:56 edwards * main/sfpcac/run_tune/: tune_remez.pl, tune_remez_nf21.pl: Removed squaring of compensation factor for bounds. 2008-03-28 22:58 edwards * main/sfpcac/run_tune/tune_param_nf21_syz_per.pl: Some updates. 2008-03-28 22:58 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Changed 4g to 256 cores. Removed all old gigE variants. 2008-03-12 22:24 edwards * main/sfpcac/run_tune/spec_per_work_eigcg.pl: Small change of params. 2008-03-11 15:44 jbulava * main/stoch/stoch_group_baryon.cc: Handles the changes to make_ops.cc 2008-03-08 23:28 edwards * main/sfpcac/run_tune/: run_mixed_valence_spec_eigcg_per.pl, spec_per_work_eigcg.pl: Changed params. 2008-03-07 11:52 jbulava * include/io/adat_io.h, main/stoch/Makefile.am, main/stoch/stoch_group_baryon.cc: Fixed 3-D array reader. Added stoch_group_baryon.cc to relevant Makefile.in. New version of stoch_group_baryon.cc 2008-03-07 10:33 edwards * main/sfpcac/run_tune/run_all_mixed_valence_per_spec_eigcg.pl: Fix. 2008-03-07 10:32 edwards * main/sfpcac/run_tune/run_all_mixed_valence_per_spec_eigcg.pl: Run the eigcg version. 2008-03-07 10:20 edwards * main/sfpcac/run_tune/: launch_pbs_jobs_work.pl, run_mixed_valence_spec_eigcg_per.pl, run_mixed_valence_spec_per.pl, spec_per_work_eigcg.pl: New eig version. Updated run params. 2008-02-28 18:14 edwards * main/sfpcac/run_tune/: build_chroma_xml.csh, build_smeared_wloops_xml.csh, build_unsmeared_wloops_xml.csh: Fixed a bug. Must put a "." after the xml file name of the sources. 2008-02-24 16:20 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Added missing eta. 2008-02-24 16:18 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Added missing phi in the bin_props. 2008-02-24 15:44 edwards * main/sfpcac/sub_extract_rho.pl: Fixed. 2008-02-24 15:09 tag qdp1-25-2 2008-02-24 15:09 tag qdp1-26-0 2008-02-24 15:09 tag qio2-3-4 2008-02-24 15:09 tag qio2-3-5 2008-02-24 15:09 tag qio2-3-6 2008-02-24 15:09 detar * other_libs/c-lime/examples/lime_extract_record.c: Correct file splitting/joining for hypercube records 2008-02-23 21:28 edwards * main/sfpcac/: qpot_exp_fit.cc: Yet another no-fit work-around. 2008-02-23 21:27 edwards * main/sfpcac/qpot_exp_fit.cc: Put in another no-fit case. 2008-02-23 21:23 edwards * main/sfpcac/sub_extract_r0.pl: Handle the no-data case. 2008-02-23 21:23 edwards * main/sfpcac/qpot_exp_fit.cc: Put in a workaround for a no-fit case. 2008-02-23 17:42 edwards * main/sfpcac/qpot_exp_fit.cc: Changed a the check of fit_crit to fit_crit >= fit_max. 2008-02-23 16:34 edwards * main/sfpcac/qpot_exp_fit.cc: Fixed V_0_err output. 2008-02-23 16:34 edwards * main/sfpcac/qpot_exp_fit.cc: Added r_0 to final fit output! 2008-02-23 16:17 edwards * main/sfpcac/qpot_exp_fit.cc: Added printing of size in final fit output. 2008-02-23 16:14 edwards * main/sfpcac/: qpot_exp_fit.cc, qpot_exp_fit.h, qpot_fit.cc: Changed return type for qpot_fit. Fixed some pop(xml_out) issues. 2008-02-23 16:13 edwards * main/sfpcac/qpot_fit.ini.xml: Input file for qpot_exp_fit. 2008-02-23 15:18 edwards * main/sfpcac/qpot_exp_fit.cc: Changed slightly a print statement. 2008-02-23 15:16 edwards * main/sfpcac/: qpot_exp_fit.cc, qpot_exp_fit.h: Pulled final qpot_fit apart into different fitting choices - fixed, restricted and variable. Put in more stringent checks of qpot fit which rejects neg. "e". 2008-02-23 15:15 edwards * main/sfpcac/: Makefile.am, qpot_exp_fit_params.cc, qpot_exp_fit_params.h: Added qpot_ex_fit_params. 2008-02-23 12:00 edwards * main/sfpcac/sub_extract_pion_rho.pl: Some fixes to get to work properly. 2008-02-23 11:51 edwards * main/sfpcac/: sub_extract_pion.pl, sub_extract_pion_rho.pl: Put back in tail-ing out the num_data. 2008-02-23 11:12 edwards * main/sfpcac/extract_deltaM.pl: Changed output variable name. 2008-02-23 11:02 edwards * main/sfpcac/: extract_pion.pl, extract_pion_rho.pl, sub_extract_pion.pl, sub_extract_pion_rho.pl: New file extractions. 2008-02-22 16:33 edwards * main/sfpcac/run_tune/: generate_nf3_syz_tree.pl, tune_param_nf3_syz_tree.pl: Some improvements. 2008-02-22 16:09 edwards * main/sfpcac/run_tune/: generate_nf3_syz_tree.pl, run_chroma.pl, run_launch_tree.pl, run_tune_tree.pl, tune_param_nf3_syz_tree.pl: Support tree-level SF generation. 2008-02-22 16:09 edwards * main/sfpcac/run_tune/run_hmc.pl: Changed a diagnostic message. 2008-02-21 22:43 edwards * main/sfpcac/: extract_deltaM.pl, sub_extract_deltaM.pl: Delta-M extraction. 2008-02-21 22:14 edwards * main/sfpcac/sf_plane_fit_fixed_mass.cubefit.pl: Switched back to old xi=3.5 bounds on x and y axis of agr plots. 2008-02-21 09:55 edwards * main/sfpcac/run_tune/: extend_all_mixed_valence_per_spec.pl, extend_pbs_jobs_work.pl: Can now extend generic valence jobs. 2008-02-21 09:55 edwards * main/sfpcac/run_tune/launch_pbs_jobs_work.pl: Changed job stream mix. 2008-02-21 09:54 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_per.pl: Switched to 16^3. I need to improve this - find the lattice size from the config. 2008-02-21 09:54 edwards * main/sfpcac/run_tune/: tune_param_nf21_syz_non.pl, tune_param_nf3_syz_non.pl: Some different masses. 2008-02-21 09:54 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Switched to MIN_NORM_2 for all monomials. 2008-02-20 17:20 edwards * main/sfpcac/qpot_exp_fit.cc: Added a proper potential fit from the energies. Seems to work. 2008-02-20 17:20 edwards * main/sfpcac/: data_covar.cc, data_covar.h: Changed some types back to my favorite "Real" instead of double. 2008-02-20 17:19 edwards * main/sfpcac/: chisqq.cc, chisqq.h: Added a chisqq_zero function. 2008-02-20 17:19 edwards * main/sfpcac/: Makefile.am, linear_covar_genfit.cc, linear_covar_genfit.h: Added linear_covar_genfit. 2008-02-16 16:37 edwards * main/sfpcac/: data_covar.cc, data_covar.h, qpot_exp_fit.cc, qpot_exp_fit.h: Some more cleanups and rearrangements. Code works at the moment finding energies will full covariance and automated fitting ranges. Next is to fit the potential. 2008-02-16 15:31 edwards * main/sfpcac/qpot_exp_fit.cc: Cleaned up ExpFunc and ChiSqFunc. 2008-02-16 15:30 edwards * main/sfpcac/data_covar.cc: Use rescaling tricks from fitmcosh package. 2008-02-15 22:34 edwards * main/sfpcac/chisqq.cc: Improved error message. 2008-02-15 22:33 edwards * main/sfpcac/: Makefile.am, data_covar.cc, data_covar.h, qpot_exp_fit.cc, qpot_exp_fit.h, qpot_fit.cc: Added a data covariance. 2008-02-15 01:13 edwards * main/sfpcac/qpot_exp_fit.cc: Some fixes on jackknife fits. 2008-02-15 01:04 edwards * main/sfpcac/qpot_exp_fit.cc: Major rewrite, but still more in progress. 2008-02-14 21:56 edwards * main/sfpcac/: qpot_exp_fit.cc, qpot_exp_fit.h, qpot_fit.cc: Added multi-exp capability. Needs a reorg to use this correctly, though. 2008-02-14 12:01 edwards * main/sfpcac/qpot_exp_fit.cc: Update some output. 2008-02-14 11:57 edwards * main/sfpcac/qpot_exp_fit.cc: Rearranged printout. 2008-02-14 11:53 edwards * main/sfpcac/qpot_exp_fit.cc: Print different stuff. 2008-02-14 11:51 edwards * main/sfpcac/qpot_exp_fit.cc: Fixed zero. 2008-02-14 11:50 edwards * main/sfpcac/qpot_exp_fit.cc: Added chisqq. 2008-02-14 11:49 edwards * main/sfpcac/Makefile.am: Added chisqq to qpot_fit. 2008-02-14 11:47 edwards * main/sfpcac/qpot_exp_fit.cc: Print more stuff. 2008-02-14 11:01 edwards * main/sfpcac/qpot_exp_fit.cc: Changed error analysis. 2008-02-11 23:24 edwards * main/sfpcac/run_tune/generate_nf21_syz.pl: Changed updating steps. 2008-02-11 01:43 edwards * main/sfpcac/qpot_exp_fit.cc: Changed OneExpFcn to use a derivative. 2008-02-11 00:49 edwards * main/sfpcac/qpot_exp_fit.cc: Small bug fix in Tmax check. 2008-02-11 00:33 edwards * main/sfpcac/: qpot.cc, qpot_eff.cc, qpot_exp_fit.cc, qpot_exp_fit.h, qpot_fit.cc: Moved qpot.cc to qpot_eff.cc . Now have a new qpot_fit.cc. 2008-02-11 00:33 edwards * main/sfpcac/Makefile.am: New qpot_fit that links against minuit. Moved qpot.cc over to qpot_eff.cc 2008-02-11 00:28 edwards * other_libs/minuit/: AUTHORS, COPYING, NEWS, README: Required files. 2008-02-11 00:27 edwards * other_libs/minuit/: aclocal.m4, config.h.in, configure: Induced changes. 2008-02-11 00:26 edwards * other_libs/minuit/: Makefile.am, configure.in, doc/Makefile.am, inc/Makefile.am, inc/Minuit2/Makefile.am, src/Makefile.am: Removed all libtool-isms - hurray. 2008-02-09 17:28 edwards * aclocal.m4, configure: Induced changes 2008-02-09 17:28 edwards * configure.ac, other_libs/Makefile.am: Added minuit. 2008-02-09 17:19 edwards * other_libs/minuit/: Makefile.am, configure.in, aclocal.m4, configure, config.h.in: Touching 2008-02-09 17:03 edwards * other_libs/minuit/aclocal.m4: Induced changes 2008-02-09 16:56 tag initial-minuit2-5-16 2008-02-09 16:56 edwards * other_libs/minuit/: aclocal.m4, config.h.in, Makefile.am, configure, configure.in, config/config.guess, config/config.sub, config/depcomp, config/install-sh, config/ltmain.sh, config/missing, config/m4/ac_compile_warnings.m4, config/m4/pfk_cxx_lib_path.m4, doc/Doxyfile.in, doc/Makefile.am, inc/Makefile.am, inc/Minuit2/ABObj.h, inc/Minuit2/ABProd.h, inc/Minuit2/ABSum.h, inc/Minuit2/ABTypes.h, inc/Minuit2/AnalyticalGradientCalculator.h, inc/Minuit2/BasicFunctionGradient.h, inc/Minuit2/BasicFunctionMinimum.h, inc/Minuit2/BasicMinimumError.h, inc/Minuit2/BasicMinimumParameters.h, inc/Minuit2/BasicMinimumSeed.h, inc/Minuit2/BasicMinimumState.h, inc/Minuit2/CombinedMinimizer.h, inc/Minuit2/CombinedMinimumBuilder.h, inc/Minuit2/ContoursError.h, inc/Minuit2/DavidonErrorUpdator.h, inc/Minuit2/FCNBase.h, inc/Minuit2/FCNGradientBase.h, inc/Minuit2/FumiliBuilder.h, inc/Minuit2/FumiliChi2FCN.h, inc/Minuit2/FumiliErrorUpdator.h, inc/Minuit2/FumiliFCNBase.h, inc/Minuit2/FumiliGradientCalculator.h, inc/Minuit2/FumiliMaximumLikelihoodFCN.h, inc/Minuit2/FumiliMinimizer.h, inc/Minuit2/FumiliStandardChi2FCN.h, inc/Minuit2/FumiliStandardMaximumLikelihoodFCN.h, inc/Minuit2/FunctionGradient.h, inc/Minuit2/FunctionMinimizer.h, inc/Minuit2/FunctionMinimum.h, inc/Minuit2/GenericFunction.h, inc/Minuit2/GradientCalculator.h, inc/Minuit2/HessianGradientCalculator.h, inc/Minuit2/InitialGradientCalculator.h, inc/Minuit2/LASymMatrix.h, inc/Minuit2/LAVector.h, inc/Minuit2/LaInverse.h, inc/Minuit2/LaOuterProduct.h, inc/Minuit2/LaProd.h, inc/Minuit2/LaSum.h, inc/Minuit2/Makefile.am, inc/Minuit2/MatrixInverse.h, inc/Minuit2/MinimumBuilder.h, inc/Minuit2/MinimumError.h, inc/Minuit2/MinimumErrorUpdator.h, inc/Minuit2/MinimumParameters.h, inc/Minuit2/MinimumSeed.h, inc/Minuit2/MinimumSeedGenerator.h, inc/Minuit2/MinimumState.h, inc/Minuit2/MinosError.h, inc/Minuit2/MinuitParameter.h, inc/Minuit2/MnApplication.h, inc/Minuit2/MnConfig.h, inc/Minuit2/MnContours.h, inc/Minuit2/MnCovarianceSqueeze.h, inc/Minuit2/MnCross.h, inc/Minuit2/MnEigen.h, inc/Minuit2/MnFcn.h, inc/Minuit2/MnFumiliMinimize.h, inc/Minuit2/MnFunctionCross.h, inc/Minuit2/MnGlobalCorrelationCoeff.h, inc/Minuit2/MnHesse.h, inc/Minuit2/MnLineSearch.h, inc/Minuit2/MnMachinePrecision.h, inc/Minuit2/MnMatrix.h, inc/Minuit2/MnMigrad.h, inc/Minuit2/MnMinimize.h, inc/Minuit2/MnMinos.h, inc/Minuit2/MnParabola.h, inc/Minuit2/MnParabolaFactory.h, inc/Minuit2/MnParabolaPoint.h, inc/Minuit2/MnParameterScan.h, inc/Minuit2/MnPlot.h, inc/Minuit2/MnPosDef.h, inc/Minuit2/MnPrint.h, inc/Minuit2/MnRefCountedPointer.h, inc/Minuit2/MnReferenceCounter.h, inc/Minuit2/MnScan.h, inc/Minuit2/MnSeedGenerator.h, inc/Minuit2/MnSimplex.h, inc/Minuit2/MnStrategy.h, inc/Minuit2/MnTiny.h, inc/Minuit2/MnUserCovariance.h, inc/Minuit2/MnUserFcn.h, inc/Minuit2/MnUserParameterState.h, inc/Minuit2/MnUserParameters.h, inc/Minuit2/MnUserTransformation.h, inc/Minuit2/MnVectorTransform.h, inc/Minuit2/ModularFunctionMinimizer.h, inc/Minuit2/NegativeG2LineSearch.h, inc/Minuit2/Numerical2PGradientCalculator.h, inc/Minuit2/ParametricFunction.h, inc/Minuit2/ScanBuilder.h, inc/Minuit2/ScanMinimizer.h, inc/Minuit2/SimplexBuilder.h, inc/Minuit2/SimplexMinimizer.h, inc/Minuit2/SimplexParameters.h, inc/Minuit2/SimplexSeedGenerator.h, inc/Minuit2/SinParameterTransformation.h, inc/Minuit2/SqrtLowParameterTransformation.h, inc/Minuit2/SqrtUpParameterTransformation.h, inc/Minuit2/StackAllocator.h, inc/Minuit2/VariableMetricBuilder.h, inc/Minuit2/VariableMetricEDMEstimator.h, inc/Minuit2/VariableMetricMinimizer.h, inc/Minuit2/VectorOuterProduct.h, src/AnalyticalGradientCalculator.cxx, src/BasicMinimumError.cxx, src/CombinedMinimumBuilder.cxx, src/DavidonErrorUpdator.cxx, src/FumiliBuilder.cxx, src/FumiliErrorUpdator.cxx, src/FumiliGradientCalculator.cxx, src/FumiliMinimizer.cxx, src/FumiliStandardChi2FCN.cxx, src/FumiliStandardMaximumLikelihoodFCN.cxx, src/HessianGradientCalculator.cxx, src/InitialGradientCalculator.cxx, src/LaEigenValues.cxx, src/LaInnerProduct.cxx, src/LaInverse.cxx, src/LaOuterProduct.cxx, src/LaSumOfElements.cxx, src/LaVtMVSimilarity.cxx, src/Makefile.am, src/MnApplication.cxx, src/MnContours.cxx, src/MnCovarianceSqueeze.cxx, src/MnEigen.cxx, src/MnFcn.cxx, src/MnFumiliMinimize.cxx, src/MnFunctionCross.cxx, src/MnGlobalCorrelationCoeff.cxx, src/MnHesse.cxx, src/mnbins.cxx, src/mndasum.cxx, src/mndaxpy.cxx, src/mnddot.cxx, src/mndscal.cxx, src/mndspmv.cxx, src/mndspr.cxx, src/MnLineSearch.cxx, src/MnMachinePrecision.cxx, src/MnMinos.cxx, src/MnParabolaFactory.cxx, src/MnParameterScan.cxx, src/MnPlot.cxx, src/MnPosDef.cxx, src/MnPrint.cxx, src/MnScan.cxx, src/MnSeedGenerator.cxx, src/MnStrategy.cxx, src/MnTiny.cxx, src/MnUserFcn.cxx, src/MnUserParameterState.cxx, src/MnUserParameters.cxx, src/MnUserTransformation.cxx, src/ModularFunctionMinimizer.cxx, src/NegativeG2LineSearch.cxx, src/Numerical2PGradientCalculator.cxx, src/ParametricFunction.cxx, src/ScanBuilder.cxx, src/SimplexBuilder.cxx, src/SimplexParameters.cxx, src/SimplexSeedGenerator.cxx, src/SinParameterTransformation.cxx, src/SqrtLowParameterTransformation.cxx, src/SqrtUpParameterTransformation.cxx, src/VariableMetricBuilder.cxx, src/VariableMetricEDMEstimator.cxx, src/mnlsame.cxx, src/mnteigen.cxx, src/mntplot.cxx, src/mnvert.cxx, src/mnxerbla.cxx, test/Makefile.am, test/MnSim/DemoFumili.cxx, test/MnSim/DemoGaussSim.cxx, test/MnSim/FlatRandomGen.h, test/MnSim/GaussDataGen.cxx, test/MnSim/GaussDataGen.h, test/MnSim/GaussFcn.cxx, test/MnSim/GaussFcn.h, test/MnSim/GaussFcn2.cxx, test/MnSim/GaussFcn2.h, test/MnSim/GaussFunction.h, test/MnSim/GaussRandomGen.h, test/MnSim/GaussianModelFunction.h, test/MnSim/Makefile.am, test/MnSim/PaulTest.cxx, test/MnSim/PaulTest2.cxx, test/MnSim/PaulTest3.cxx, test/MnSim/PaulTest4.cxx, test/MnSim/ReneTest.cxx, test/MnSim/paul.txt, test/MnSim/paul2.txt, test/MnSim/paul3.txt, test/MnSim/paul4.txt, test/MnTutorial/Makefile.am, test/MnTutorial/Quad12F.h, test/MnTutorial/Quad12FMain.cxx, test/MnTutorial/Quad1F.h, test/MnTutorial/Quad1FMain.cxx, test/MnTutorial/Quad4F.h, test/MnTutorial/Quad4FMain.cxx, test/MnTutorial/Quad8F.h, test/MnTutorial/Quad8FMain.cxx: Import of Minuit2-15.16.00 2008-02-09 16:56 edwards * other_libs/minuit/: aclocal.m4, config.h.in, Makefile.am, configure, configure.in, config/config.guess, config/config.sub, config/depcomp, config/install-sh, config/ltmain.sh, config/missing, config/m4/ac_compile_warnings.m4, config/m4/pfk_cxx_lib_path.m4, doc/Doxyfile.in, doc/Makefile.am, inc/Makefile.am, inc/Minuit2/ABObj.h, inc/Minuit2/ABProd.h, inc/Minuit2/ABSum.h, inc/Minuit2/ABTypes.h, inc/Minuit2/AnalyticalGradientCalculator.h, inc/Minuit2/BasicFunctionGradient.h, inc/Minuit2/BasicFunctionMinimum.h, inc/Minuit2/BasicMinimumError.h, inc/Minuit2/BasicMinimumParameters.h, inc/Minuit2/BasicMinimumSeed.h, inc/Minuit2/BasicMinimumState.h, inc/Minuit2/CombinedMinimizer.h, inc/Minuit2/CombinedMinimumBuilder.h, inc/Minuit2/ContoursError.h, inc/Minuit2/DavidonErrorUpdator.h, inc/Minuit2/FCNBase.h, inc/Minuit2/FCNGradientBase.h, inc/Minuit2/FumiliBuilder.h, inc/Minuit2/FumiliChi2FCN.h, inc/Minuit2/FumiliErrorUpdator.h, inc/Minuit2/FumiliFCNBase.h, inc/Minuit2/FumiliGradientCalculator.h, inc/Minuit2/FumiliMaximumLikelihoodFCN.h, inc/Minuit2/FumiliMinimizer.h, inc/Minuit2/FumiliStandardChi2FCN.h, inc/Minuit2/FumiliStandardMaximumLikelihoodFCN.h, inc/Minuit2/FunctionGradient.h, inc/Minuit2/FunctionMinimizer.h, inc/Minuit2/FunctionMinimum.h, inc/Minuit2/GenericFunction.h, inc/Minuit2/GradientCalculator.h, inc/Minuit2/HessianGradientCalculator.h, inc/Minuit2/InitialGradientCalculator.h, inc/Minuit2/LASymMatrix.h, inc/Minuit2/LAVector.h, inc/Minuit2/LaInverse.h, inc/Minuit2/LaOuterProduct.h, inc/Minuit2/LaProd.h, inc/Minuit2/LaSum.h, inc/Minuit2/Makefile.am, inc/Minuit2/MatrixInverse.h, inc/Minuit2/MinimumBuilder.h, inc/Minuit2/MinimumError.h, inc/Minuit2/MinimumErrorUpdator.h, inc/Minuit2/MinimumParameters.h, inc/Minuit2/MinimumSeed.h, inc/Minuit2/MinimumSeedGenerator.h, inc/Minuit2/MinimumState.h, inc/Minuit2/MinosError.h, inc/Minuit2/MinuitParameter.h, inc/Minuit2/MnApplication.h, inc/Minuit2/MnConfig.h, inc/Minuit2/MnContours.h, inc/Minuit2/MnCovarianceSqueeze.h, inc/Minuit2/MnCross.h, inc/Minuit2/MnEigen.h, inc/Minuit2/MnFcn.h, inc/Minuit2/MnFumiliMinimize.h, inc/Minuit2/MnFunctionCross.h, inc/Minuit2/MnGlobalCorrelationCoeff.h, inc/Minuit2/MnHesse.h, inc/Minuit2/MnLineSearch.h, inc/Minuit2/MnMachinePrecision.h, inc/Minuit2/MnMatrix.h, inc/Minuit2/MnMigrad.h, inc/Minuit2/MnMinimize.h, inc/Minuit2/MnMinos.h, inc/Minuit2/MnParabola.h, inc/Minuit2/MnParabolaFactory.h, inc/Minuit2/MnParabolaPoint.h, inc/Minuit2/MnParameterScan.h, inc/Minuit2/MnPlot.h, inc/Minuit2/MnPosDef.h, inc/Minuit2/MnPrint.h, inc/Minuit2/MnRefCountedPointer.h, inc/Minuit2/MnReferenceCounter.h, inc/Minuit2/MnScan.h, inc/Minuit2/MnSeedGenerator.h, inc/Minuit2/MnSimplex.h, inc/Minuit2/MnStrategy.h, inc/Minuit2/MnTiny.h, inc/Minuit2/MnUserCovariance.h, inc/Minuit2/MnUserFcn.h, inc/Minuit2/MnUserParameterState.h, inc/Minuit2/MnUserParameters.h, inc/Minuit2/MnUserTransformation.h, inc/Minuit2/MnVectorTransform.h, inc/Minuit2/ModularFunctionMinimizer.h, inc/Minuit2/NegativeG2LineSearch.h, inc/Minuit2/Numerical2PGradientCalculator.h, inc/Minuit2/ParametricFunction.h, inc/Minuit2/ScanBuilder.h, inc/Minuit2/ScanMinimizer.h, inc/Minuit2/SimplexBuilder.h, inc/Minuit2/SimplexMinimizer.h, inc/Minuit2/SimplexParameters.h, inc/Minuit2/SimplexSeedGenerator.h, inc/Minuit2/SinParameterTransformation.h, inc/Minuit2/SqrtLowParameterTransformation.h, inc/Minuit2/SqrtUpParameterTransformation.h, inc/Minuit2/StackAllocator.h, inc/Minuit2/VariableMetricBuilder.h, inc/Minuit2/VariableMetricEDMEstimator.h, inc/Minuit2/VariableMetricMinimizer.h, inc/Minuit2/VectorOuterProduct.h, src/AnalyticalGradientCalculator.cxx, src/BasicMinimumError.cxx, src/CombinedMinimumBuilder.cxx, src/DavidonErrorUpdator.cxx, src/FumiliBuilder.cxx, src/FumiliErrorUpdator.cxx, src/FumiliGradientCalculator.cxx, src/FumiliMinimizer.cxx, src/FumiliStandardChi2FCN.cxx, src/FumiliStandardMaximumLikelihoodFCN.cxx, src/HessianGradientCalculator.cxx, src/InitialGradientCalculator.cxx, src/LaEigenValues.cxx, src/LaInnerProduct.cxx, src/LaInverse.cxx, src/LaOuterProduct.cxx, src/LaSumOfElements.cxx, src/LaVtMVSimilarity.cxx, src/Makefile.am, src/MnApplication.cxx, src/MnContours.cxx, src/MnCovarianceSqueeze.cxx, src/MnEigen.cxx, src/MnFcn.cxx, src/MnFumiliMinimize.cxx, src/MnFunctionCross.cxx, src/MnGlobalCorrelationCoeff.cxx, src/MnHesse.cxx, src/mnbins.cxx, src/mndasum.cxx, src/mndaxpy.cxx, src/mnddot.cxx, src/mndscal.cxx, src/mndspmv.cxx, src/mndspr.cxx, src/MnLineSearch.cxx, src/MnMachinePrecision.cxx, src/MnMinos.cxx, src/MnParabolaFactory.cxx, src/MnParameterScan.cxx, src/MnPlot.cxx, src/MnPosDef.cxx, src/MnPrint.cxx, src/MnScan.cxx, src/MnSeedGenerator.cxx, src/MnStrategy.cxx, src/MnTiny.cxx, src/MnUserFcn.cxx, src/MnUserParameterState.cxx, src/MnUserParameters.cxx, src/MnUserTransformation.cxx, src/ModularFunctionMinimizer.cxx, src/NegativeG2LineSearch.cxx, src/Numerical2PGradientCalculator.cxx, src/ParametricFunction.cxx, src/ScanBuilder.cxx, src/SimplexBuilder.cxx, src/SimplexParameters.cxx, src/SimplexSeedGenerator.cxx, src/SinParameterTransformation.cxx, src/SqrtLowParameterTransformation.cxx, src/SqrtUpParameterTransformation.cxx, src/VariableMetricBuilder.cxx, src/VariableMetricEDMEstimator.cxx, src/mnlsame.cxx, src/mnteigen.cxx, src/mntplot.cxx, src/mnvert.cxx, src/mnxerbla.cxx, test/Makefile.am, test/MnSim/DemoFumili.cxx, test/MnSim/DemoGaussSim.cxx, test/MnSim/FlatRandomGen.h, test/MnSim/GaussDataGen.cxx, test/MnSim/GaussDataGen.h, test/MnSim/GaussFcn.cxx, test/MnSim/GaussFcn.h, test/MnSim/GaussFcn2.cxx, test/MnSim/GaussFcn2.h, test/MnSim/GaussFunction.h, test/MnSim/GaussRandomGen.h, test/MnSim/GaussianModelFunction.h, test/MnSim/Makefile.am, test/MnSim/PaulTest.cxx, test/MnSim/PaulTest2.cxx, test/MnSim/PaulTest3.cxx, test/MnSim/PaulTest4.cxx, test/MnSim/ReneTest.cxx, test/MnSim/paul.txt, test/MnSim/paul2.txt, test/MnSim/paul3.txt, test/MnSim/paul4.txt, test/MnTutorial/Makefile.am, test/MnTutorial/Quad12F.h, test/MnTutorial/Quad12FMain.cxx, test/MnTutorial/Quad1F.h, test/MnTutorial/Quad1FMain.cxx, test/MnTutorial/Quad4F.h, test/MnTutorial/Quad4FMain.cxx, test/MnTutorial/Quad8F.h, test/MnTutorial/Quad8FMain.cxx: Initial revision 2008-02-09 15:29 edwards * main/sfpcac/run_tune/build_pcac_xml.csh: Fixes. 2008-02-09 15:29 edwards * main/sfpcac/extract_pcac_mixed.pl: Extract mixed valance pcac. 2008-02-09 15:28 edwards * main/sfpcac/sub_extract_pcac_mixed.pl: New. 2008-02-09 15:28 edwards * main/sfpcac/sub_extract_pcac.pl: Changed binary location. Changed xpath. 2008-02-09 15:26 edwards * main/formfac/Makefile.am: Moved programs no longer compiling to EXTRA. 2008-02-09 13:33 edwards * include/formfac/formfac_manage_3pt.h: Turned off unordered_map. 2008-02-08 22:01 edwards * main/sfpcac/run_tune/: build_pcac_xml.csh, tune_param_nf21_syz_non.pl: Further changes. 2008-02-08 00:01 edwards * main/sfpcac/run_tune/build_pcac_xml.csh: New pcac builder. 2008-02-06 16:32 edwards * main/sfpcac/run_tune/: tune_param_nf21_syz_non.pl, tune_param_nf21_syz_per.pl: Some different params. 2008-02-06 16:31 edwards * main/sfpcac/run_tune/launch_pbs_jobs_work.pl: Changed job run characteristics. 2008-02-06 16:31 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Reverted from mpiexec back to mpirun_rsh. 2008-02-06 16:30 edwards * main/sfpcac/run_tune/run_diagonal_valence_spec_per.pl: Changed smearing widths. 2008-02-06 16:30 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_per.pl: Switched to 4 sources and turned on mom. 2008-02-06 13:56 edwards * main/sfpcac/run_tune/generate_nf21_syz.pl: Split PCAC measurements off to a pcac_u and a pcac_s xml file. 2008-02-06 00:24 edwards * main/sfpcac/run_tune/generate_nf21_syz.pl: Grrh. Bug fix - fixed the num_flavors in the strange quark LOGDET. 2008-02-05 22:36 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Added missing eta and phi in final link. 2008-02-05 16:55 tag qio2-3-3 2008-02-05 16:55 detar * other_libs/c-lime/examples/lime_extract_record.c: Bug fix. 2008-02-05 16:51 detar * other_libs/c-lime/lib/lime_reader.c: Complain about premature EOF 2008-02-04 02:38 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Split out mesons and baryons. 2008-02-04 02:33 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Split out mesons and baryons. 2008-02-04 02:32 edwards * main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh: Bug fixes. Also added non-zero momentum. 2008-02-01 01:13 edwards * main/sfpcac/run_tune/tune_param_nf21_syz_non.pl: Fixed some more params. 2008-02-01 00:53 edwards * main/sfpcac/run_tune/tune_param_nf21_syz_non.pl: Added a missing beta. 2008-02-01 00:50 edwards * main/sfpcac/run_tune/tune_param_nf21_syz_non.pl: Updated params. 2008-02-01 00:44 edwards * main/sfpcac/run_tune/: tune_param_nf3_syz_dir.pl, tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl, tune_param_nf21_syz_non.pl: Latest version. 2008-02-01 00:37 edwards * main/sfpcac/run_tune/generate_nf21_syz.pl: New form. 2008-02-01 00:34 edwards * main/sfpcac/run_tune/generate_nf21_syz_largevol.pl: Folded link_smear into a STOUT_GAUGE_STATE within the smeared wilslps. Changed smearing size for wilslp. 2008-01-30 23:27 edwards * main/sfpcac/run_tune/run_launch_sp.pl: In the case of unequal "u" and "s" quark masses, the stem3 now has a "s" quark mass dependence. 2008-01-29 22:43 edwards * main/sfpcac/run_tune/: strip_per_merge_data.csh, strip_per_merge_diagonal_valence.csh, strip_per_merge_mixed_valence.csh: Added missing path for removal. 2008-01-27 22:35 edwards * main/sfpcac/run_tune/: strip_per_merge_diagonal_valence.csh, strip_per_merge_mixed_valence.csh: Added missing links. 2008-01-27 22:08 edwards * main/sfpcac/run_tune/: strip_per_merge_diagonal_valence.csh, strip_per_merge_mixed_valence.csh: Added new merging. 2008-01-27 00:17 edwards * main/sfpcac/run_tune/launch_pbs_jobs_work.pl: Changed max traj. for job submissions. 2008-01-26 23:35 edwards * main/sfpcac/run_tune/: run_diagonal_valence_spec_per.pl, run_mixed_valence_spec_per.pl: Reset residual. 2008-01-26 23:34 edwards * main/sfpcac/run_tune/unpack_per_avg_data.csh: Not needed. 2008-01-26 23:34 edwards * main/sfpcac/run_tune/strip_per_avg_diagonal_valence.csh: Actually converted the script to the correct form needed for diagonal valence quarks. 2008-01-26 22:58 edwards * main/sfpcac/run_tune/launch_pbs_jobs_work.pl: Fixed path to lime_extract. 2008-01-26 22:51 edwards * main/sfpcac/run_tune/: launch_pbs_jobs_work.pl, run_all_diagonal_valence_per_spec.pl, run_all_light_dir_spec.pl, run_all_light_per_spec.pl, run_all_light_spec_work.pl, run_all_mixed_valence_per_spec.pl, run_diagonal_valence_spec_per.pl, run_mixed_valence_spec_per.pl, spec_per_work.pl, strip_per_avg_diagonal_valence.csh: Split off xml generation to a common spec_per_work.pl script. Moved the run_all_light_dir_spec to launch_pbs_jobs_work. Added new diagonal version of the spec script. 2008-01-26 21:26 edwards * main/sfpcac/run_tune/run_all_light_spec_work.pl: Fixed lime_extract_record. 2008-01-26 18:21 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_per.pl: Reset the RsdCG back to a sane value. 2008-01-26 18:21 edwards * main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh: Save the lambda. 2008-01-26 18:07 edwards * main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh: Added b1 to the particles saved. 2008-01-26 18:01 edwards * main/sfpcac/run_tune/strip_per_avg_mixed_valence.csh: Fixed extension name. 2008-01-26 17:58 edwards * main/sfpcac/run_tune/strip_per_merge_mixed_valence.csh: Strip mixed valence data. 2008-01-26 17:53 edwards * main/sfpcac/run_tune/run_mixed_valence_spec_per.pl: Fixed lattice size. 2008-01-26 17:11 edwards * main/sfpcac/run_tune/: run_all_light_dir_spec.pl, run_all_light_per_spec.pl, run_all_light_spec_work.pl, run_all_mixed_valence_per_spec.pl, run_light_nu_dir.pl, run_light_nu_per.pl, run_mixed_valence_spec_per.pl, strip_per_avg_mixed_valence.csh: Reorganized the basic script to read all params from the config. Added new mixed valence runs. 2008-01-26 13:43 edwards * main/strippers/strip_hadspec.cc: Fixed test on Mass_1< Mass_2 for baryons. This was a string test. It should instead be on floats. 2008-01-25 22:11 edwards * main/sfpcac/run_tune/run_light_qpot_per.pl: Changed smearing params. 2008-01-23 17:07 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Changed smeared wilson loop measurement to go through a stout_gauge_stout. This avoids any issues with strangness in the link smearing. 2008-01-23 16:46 edwards * main/sfpcac/run_tune/: run_all_light_dir_qpot.pl, run_light_nu_per.pl, run_light_qpot_dir.pl, run_light_qpot_per.pl: Switched to using STOUT_SMEAR_OLD. Added a new dirichlet version of qpot. 2008-01-23 01:29 edwards * main/sfpcac/run_tune/run_all_light_qpot_work.pl: Fixed file names. 2008-01-22 22:30 edwards * main/sfpcac/run_tune/: run_all_light_qpot_work.pl, run_light_qpot_per.pl: Fixes to get working. 2008-01-22 22:29 edwards * main/sfpcac/run_tune/: tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl: More param changes. 2008-01-22 21:50 edwards * main/sfpcac/run_tune/: run_all_light_qpot_work.pl, run_light_qpot_per.pl: First versions for qpot. 2008-01-22 21:27 edwards * main/sfpcac/run_tune/: run_all_light_per_qpot.pl, run_all_light_qpot_work.pl: Start of scripts for running qpot. 2008-01-19 17:10 edwards * main/sfpcac/: sf_plane_fit_fixed_mass.cubefit.pl, sf_plane_fit_fixed_mass.planefit.pl: Added beta to legend. 2008-01-19 17:09 edwards * main/sfpcac/run_tune/run_all_light_spec_work.pl: Added missing beta into the script. 2008-01-19 17:06 edwards * main/sfpcac/run_tune/: tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl: New params. 2008-01-19 17:05 edwards * main/sfpcac/make_qpot.csh: Changed path to binary. 2008-01-19 17:05 edwards * main/sfpcac/: extract_xi_f.pl, sub_extract_xi_f.pl: Changed name of subroutine. 2008-01-19 16:11 edwards * main/sfpcac/extract_pcac.pl: Adjusting spacing in a column. 2008-01-17 23:42 edwards * main/sfpcac/run_tune/: run_all_light_spec_work.pl, run_light_nu_dir.pl, run_light_nu_per.pl: Generalized to now use beta and the pade for u_s, u_s_stout. 2008-01-17 23:28 edwards * main/sfpcac/run_tune/: tune_param_nf21_syz_per.pl, tune_param_nf3_syz.pl, tune_param_nf3_syz_dir.pl, tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl: More param updates. 2008-01-17 23:28 edwards * main/sfpcac/run_tune/unpack_per_avg_data.csh: Turn this off. 2008-01-17 23:28 edwards * main/sfpcac/run_tune/run_all_light_spec_work.pl: Updates for new queues. 2008-01-16 23:26 edwards * main/sfpcac/run_tune/unpack_per_avg_data.csh: Unpack data for xi_f fits. 2008-01-16 10:55 edwards * main/sfpcac/run_tune/run_all_light_spec_work.pl: Some changing of number of jobs. 2008-01-15 18:35 edwards * main/sfpcac/run_tune/: run_launch_sp.pl, tune_param_nf3_syz_dir.pl, tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl: Moved beta into the param structure passed in from the tune_param*pl files. 2008-01-15 18:26 edwards * main/sfpcac/run_tune/: coeffs_syz.pl, compute_coeffs_syz.pl, generate_nf21_syz_largevol.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Switched to using chen_tadpole_pade for all tadpole factors and clover coefficients and at all xi and nu. 2008-01-15 18:10 edwards * main/sfpcac/run_tune/: tune_param_nf21_syz_per.pl, tune_param_nf3_syz_dir.pl, tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl: More updates. 2008-01-14 21:42 edwards * lib/formfac/formfac_bb.cc: In V3, fixed missing init of bb.param.SeqSourceType. 2008-01-13 14:02 edwards * include/formfac/formfac_manage_3pt.h: Added ifdef control over use of unordered map. 2008-01-13 14:02 edwards * lib/formfac/: formfac_manage_3pt.cc, formfac_manage_3pt_bb.cc: Added ifdef control over use of unordered_map. 2008-01-08 16:06 edwards * docs/adat_threept_api.tex: Added some description of parton lib. 2008-01-06 23:46 edwards * main/ttt/Makefile.am: Removed unused VPATH. 2008-01-06 23:46 edwards * main/strippers/: Makefile.am, hadron_2pt.cc, hadron_2pt.h, hadron_contract.cc, hadron_contract.h, hadron_contract_aggregate.cc, hadron_contract_aggregate.h, hadron_contract_factory.h, simple_meson_2pt_w.cc, simple_meson_2pt_w.h, strip_hadron_contract.cc: First pass at hadron_contract code. Still needs work. Should probably be turned into just a Manage2PtFunc class. 2008-01-06 23:45 edwards * main/formfac/: Makefile.am, build_derivatives.cc, build_derivatives.ini.xml: New output for derivatives. 2008-01-06 23:44 edwards * main/formfac/test2.cc: Test of unordered_map. 2008-01-06 23:03 edwards * lib/formfac/: formfac_manage_3pt.cc, formfac_manage_3pt_bb.cc: Added some diagnostic output. 2008-01-06 23:02 edwards * include/formfac/formfac_manage_3pt.h: Expose the write and read cache entries. 2008-01-06 17:03 edwards * lib/formfac/formfac_manage_3pt_bb.cc: Temporary (but not used) private unordered_map. 2008-01-06 17:01 edwards * lib/formfac/formfac_manage_3pt.cc: Change equiv. 2008-01-06 15:00 edwards * lib/formfac/formfac_manage_3pt.cc: Changed hash function for threept. 2008-01-06 14:34 edwards * lib/: adat/adat_stopwatch.cc, formfac/formfac_manage_3pt.cc, formfac/formfac_manage_3pt_bb.cc: Added timer support. 2008-01-06 14:33 edwards * include/adat/adat_stopwatch.h: Added adat_stopwatch. 2008-01-06 14:33 edwards * include/Makefile.am, lib/Makefile.am: Added adat/adat_stopwatch. 2008-01-06 13:25 edwards * main/formfac/build_derivatives.cc: Switched from 3PtFuncMap to 3PtFunc. 2008-01-06 13:03 edwards * lib/formfac/formfac_manage_2pt.cc: Removed insert. 2008-01-06 13:03 edwards * lib/formfac/formfac_manage_3pt_bb.cc: Now have factory call back for both Map and non-Map varieties. 2008-01-06 13:02 edwards * lib/formfac/formfac_manage_3pt.cc: Switched storage from a "map" to "unordered_map" from TR1. 2008-01-06 13:01 edwards * include/formfac/: formfac_manage.h, formfac_manage_2pt.h, formfac_manage_3pt.h, formfac_manage_3pt_bb.h, formfac_manage_E.h: Took out insert from top level. Left in some const_iterator as comments - not using it yet. Needs work on the form of iterator. 2008-01-06 12:56 edwards * include/formfac/formfac_manage_factory.h: Changed to a 3ptFunc and 3ptFuncMap, and added 2pt versions as well. 2008-01-06 12:55 edwards * include/ensem/ensem.h: Some doxygen improvements. 2008-01-06 12:54 edwards * include/adat/objfactory.h: Added include of iostream and sstream. 2008-01-06 12:53 edwards * include/io/adat_io.h: Moved around a "{". 2008-01-06 00:09 tag adat1-36-0 2008-01-06 00:09 edwards * aclocal.m4, configure: Induced changes 2008-01-06 00:08 edwards * NEWS: Info on 1.36 2008-01-06 00:05 edwards * configure.ac: Changed to 1.36 2008-01-06 00:04 edwards * main/formfac/build_derivatives.cc: Changed to a second derivative form. 2008-01-06 00:04 edwards * lib/formfac/formfac_manage_3pt.cc: Added some debugging comments. 2008-01-04 14:47 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Switched to using mpiexec instead of mpirun_rsh 2008-01-04 14:30 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Switched 6n to 7n. 2008-01-04 00:41 edwards * main/sfpcac/run_tune/: tune_param_nf21_syz_per.pl, tune_param_nf3_syz_dir.pl, tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl: Added continue_script. 2008-01-04 00:37 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Changed to use continue_script. 2008-01-04 00:02 edwards * main/sfpcac/run_tune/tune_remez_nf21.pl: Fixes. 2008-01-03 23:43 edwards * main/sfpcac/run_tune/: continue_copy_hmc_nf21.pl, tune_remez_nf21.pl: Versions for 2 flavors. 2007-12-29 00:52 edwards * include/formfac/formfac_manage_3pt_bb.h: Removed local_info. 2007-12-29 00:42 edwards * lib/formfac/formfac_manage_3pt_bb.cc: Some further cleanups of ensemble initialization. 2007-12-29 00:32 edwards * lib/formfac/formfac_manage_3pt_bb.cc: Put in an initialization of initEnsemble. 2007-12-28 23:23 edwards * main/formfac/build_derivatives.cc: Removed unused test. 2007-12-28 23:22 edwards * main/formfac/build_derivatives.cc: Put in a space. 2007-12-28 23:21 edwards * main/formfac/build_derivatives.ini.xml: Removed unneeded q_sq. 2007-12-28 23:21 edwards * main/formfac/build_derivatives.ini.xml: Removed redundant entry. 2007-12-28 23:01 edwards * main/formfac/: Makefile.am, build_derivatives.cc, build_derivatives.ini.xml: Added a derivatives based code. Doesn't write anything yet, though, except the usual cache file. 2007-12-27 17:05 edwards * lib/formfac/formfac_ensemble.cc: Write aniso param if it is true. 2007-12-27 17:03 edwards * lib/formfac/formfac_ensemble.cc: Fixed path name of lattice in EnsembleInfo. 2007-12-27 17:01 edwards * main/formfac/build_cache.cc: Fixed paths to state. 2007-12-27 16:58 edwards * lib/formfac/formfac_manage_3pt_bb.cc: Fixed path construction for states. 2007-12-27 16:53 edwards * lib/formfac/formfac_manage_3pt_bb.cc: Some more fixes. 2007-12-27 16:51 edwards * main/formfac/build_cache.cc: Another fix. 2007-12-27 16:50 edwards * main/formfac/build_cache.cc: Put in factory registration. 2007-12-27 16:46 edwards * include/formfac/formfac_manage_3pt_bb.h, lib/formfac/formfac_manage_3pt_bb.cc, main/formfac/build_cache.cc: Fixes. 2007-12-27 16:42 edwards * main/formfac/build_cache.ini.xml: New input params. 2007-12-27 16:36 edwards * main/strippers/strip_buildingblocks.cc: Changed nrow to latt_size. 2007-12-27 16:35 edwards * lib/parton/: parton_correlation_functions_1.cc, parton_distribution_moments.cc: Added include of assert.h 2007-12-27 16:27 edwards * main/formfac/: Makefile.am, a0_2photon.cc, a0_ff.cc, a0_ff_fold.cc, a0_photon_fit.cc, a0_photon_fit_cons.cc, a0_rho_fit.cc, a0_rho_fit_fold.cc, build_cache.cc, build_cache.ini.xml, eigen_inverse.cc, ff.cc, file_test.cc, make_mom_list.cc, meson_fit.cc, nucleon_ff.cc, pion_2photon.cc, pion_b1_fit.cc, pion_b1_fit_fold.cc, pion_ff.cc, pion_ff_fold.cc, pion_fit.cc, pion_photon_fit.cc, pion_pion_fit.cc, pion_pion_fit_cons.cc, pion_pion_fit_cons_exc.cc, pion_rho_fit.cc, pion_rho_fit_fold.cc, pion_rho_fit_fold_exc.cc, rho_a0_fit.cc, rho_a0_fit_fold.cc, rho_a1_fit.cc, rho_a1_fit_fold.cc, rho_fit.cc, rho_fit_fold.cc, rho_pion_fit.cc, rho_pion_fit_cons_exc.cc, rho_pion_fit_fold.cc, rho_pion_fit_fold_exc.cc, test.cc, test2.cc, wavefuncs.cc: Rearranged Makefile - don't build everything. Overhauls of 2pt, 3pt and Energy classes. 2007-12-27 16:26 edwards * lib/io/adat_qdpio.cc: Split up reader functions. 2007-12-27 16:25 edwards * lib/io/adat_io.cc: Added an eof function. 2007-12-27 16:25 edwards * lib/Makefile.am: Added parton distribution files. Rearranged formfac files. 2007-12-27 16:24 edwards * lib/formfac/: ff_bb.cc, ff_lsq.cc, ff_manage_2pt.cc, ff_manage_3pt.cc, ff_manage_3pt_bb.cc, ff_manage_3pt_db.cc, ff_manage_3pt_stripped.cc, ff_manage_E.cc, ff_meson_fit.cc, ff_mom_list.cc, ff_rotate.cc, ff_util.cc, formfac_bb.cc, formfac_ensemble.cc, formfac_manage.cc, formfac_manage_2pt.cc, formfac_manage_3pt.cc, formfac_manage_3pt_bb.cc, formfac_manage_3pt_db.cc, formfac_manage_3pt_stripped.cc, formfac_manage_E.cc, formfac_manage_aggregate.cc, formfac_matrix_elems.cc, formfac_meson_fit.cc, formfac_meson_matrix_elems.cc, formfac_qsq.cc, formfac_solver.cc, formfac_util.cc, matrix_elems.cc, meson_matrix_elems.cc: Major rearrangement of files. Now have a factory system. 2007-12-27 16:23 edwards * include/Makefile.am: Added parton distribution files. 2007-12-27 16:23 edwards * include/io/: adat_io.h, adat_qdpio.h: Added some new functions. 2007-12-27 16:22 edwards * include/formfac/: baryon_matrix_elems.h, formfac.h, formfac_baryon_matrix_elems.h, formfac_bb.h, formfac_ensemble.h, formfac_manage.h, formfac_manage_2pt.h, formfac_manage_3pt.h, formfac_manage_3pt_bb.h, formfac_manage_3pt_db.h, formfac_manage_3pt_stripped.h, formfac_manage_E.h, formfac_manage_aggregate.h, formfac_manage_factory.h, formfac_matrix_elems.h, formfac_matrix_elems_factory.h, formfac_meson_fit.h, formfac_meson_matrix_elems.h, formfac_qsq.h, matrix_elems.h, matrix_elems_factory.h, meson_matrix_elems.h: Rearrangement of files. 2007-12-24 16:26 edwards * main/sfpcac/run_tune/generate_nf21_syz_largevol.pl: Bug fix - the number of flavors on the strange quark was wrong. 2007-12-24 00:15 edwards * lib/parton/: correlation_functions_1.cc, correlation_functions_2.cc, derivatives.cc, matrix_elements.cc, parton_correlation_functions_1.cc, parton_correlation_functions_2.cc, parton_derivatives.cc, parton_distribution_moments.cc, parton_renormalization_factors.cc, shift_utilities.cc: Rearrange files. Now seems to compile. 2007-12-24 00:14 edwards * include/parton/: correlation_functions.h, derivatives.h, parton_correlation_functions.h, parton_derivatives.h, parton_renormalization_factors.h, renormalization_factors.h, shift_utilities.h: Moved around files. Now seems to compile. 2007-12-23 13:09 edwards * include/parton/: correlation_functions.h, derivatives.h, renormalization_factors.h: Fixes. 2007-12-23 13:05 edwards * include/ensem/: ensem_obstensor.h, ensem_obsvector.h: Added isNaN, isFinite, isInf. 2007-12-22 22:37 edwards * include/parton/: correlation_functions.h, derivatives.h, parton_distribution_moments.h, shift_utilities.h: First versions 2007-12-22 22:37 edwards * lib/parton/: correlation_functions_1.cc, correlation_functions_2.cc, derivatives.cc, matrix_elements.cc, shift_utilities.cc: First versions. 2007-12-20 23:45 edwards * main/sfpcac/run_tune/: run_tune_nf21_sp.pl, tune_param_nf21_syz_per.pl: Some fixes. 2007-12-20 23:44 edwards * main/sfpcac/run_tune/: lower_min.xsl, upper_max.xsl: Removed explicit reference to InlineObservables. 2007-12-20 23:23 edwards * main/sfpcac/run_tune/: generate_nf21_syz_largevol.pl, run_tune_nf21_sp.pl, tune_param_nf21_syz_per.pl: First pass. 2007-12-20 23:23 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Put in some more "$0" instead of fixed file names. 2007-12-20 22:44 edwards * main/sfpcac/run_tune/tune_param_nf3_syz_per.pl: Proper nf3. 2007-12-20 22:43 edwards * main/sfpcac/run_tune/: tune_param_nf3_syz_dir.pl, tune_param_nf3_syz_non.pl, tune_param_nf3_syz_per.pl: Input file used for nf3 runs. 2007-12-20 22:42 edwards * main/sfpcac/run_tune/generate_nf21_syz_largevol.pl: Start at a 2+1 version. 2007-12-20 21:33 edwards * main/sfpcac/run_tune/: build_chroma_xml.csh, build_smeared_wloops_xml.csh, build_unsmeared_wloops_xml.csh: Added some diagnostic output. 2007-12-10 02:03 edwards * main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl: Added printing of gamma_f and nu in the legends. 2007-12-10 01:37 edwards * main/sfpcac/sub_extract_r0.pl: Now only use fixed fitting intervals in "r". 2007-12-10 01:36 edwards * main/sfpcac/sf_plane_fit_fixed_mass.cubefit.pl: Also now plots special fixed gamma_g and gamma_f lines. 2007-12-10 01:36 edwards * main/sfpcac/rescale_var.pl: Will rescale output files. 2007-12-09 20:57 edwards * main/sfpcac/sf_plane_fit_fixed_mass.cubefit.pl: Avoid use of color "grey" - it's too hard to see. 2007-12-09 17:35 edwards * main/sfpcac/: rebuild_xi_g.pl, sub_rebuild_var.pl: Rebuild from the jack files. 2007-12-08 23:12 edwards * main/sfpcac/filter_qpot_Q.csh: Put a cutoff on relative error of r0 to keep the really junky fits from showing up. 2007-12-08 23:11 edwards * main/sfpcac/: extract_r0.pl, qpot_spacing.pl, sub_extract_r0.pl: Rearranged r0 extraction file names. 2007-12-08 13:53 edwards * main/sfpcac/run_tune/: build_smeared_wloops_xml.csh, build_wloops_xml.csh, build_xml.csh: Renamed build_wloops.csh to build_smeared_wloops.csh 2007-12-08 13:15 edwards * main/sfpcac/qpot_chisq.cc: Changed how "bad_data" is searched in the r_low and r_up loop. It was too restrictive before. Removed qpot_plane. 2007-12-08 11:17 edwards * main/sfpcac/run_tune/: run_all_light_dir_spec.pl, run_all_light_per_spec.pl, run_all_light_spec_work.pl, run_light_nu_dir.pl, run_light_nu_per.pl, strip_dir_avg_data.csh, strip_dir_merge_data.csh: Moved run_all_light codes to a work code. Now only depend on the actual run script and the strip script. 2007-12-08 10:28 edwards * main/sfpcac/run_tune/: run_all_light_dir_spec.pl, run_all_light_per_spec.pl, run_light_nu_per.pl, strip_per_avg_data.csh, strip_per_merge_data.csh: New versions of everything. 2007-12-08 10:12 edwards * main/sfpcac/extract_rho.pl: Fixed name of variable. 2007-12-07 23:47 edwards * main/sfpcac/: sf_plane_fit_fixed_mass.cubefit.pl, sf_plane_fit_fixed_mass.planefit.pl: Added plotting of slices. 2007-12-07 14:30 edwards * main/sfpcac/sf_plane_fit_fixed_mass.planefit.pl: Changed usage output slightly 2007-12-07 14:29 edwards * main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl: Increase symbol sizes. 2007-12-07 14:29 edwards * main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.intersect.pl: Split apart fits of xi_g and xi_f. 2007-12-07 11:25 edwards * main/sfpcac/run_tune/run_all_light_per_spec.pl: Use all queues. 2007-12-07 11:24 edwards * main/sfpcac/run_tune/run_all_light_per_spec.pl: Script to launch spectrum jobs. 2007-12-07 11:23 edwards * main/sfpcac/run_tune/: build_chroma_xml.csh, build_unsmeared_wloops_xml.csh, build_wloops_xml.csh: Don't exit in case of a bad. 2007-12-07 11:23 edwards * main/sfpcac/: sf_plane_fit_fixed_mass.cubefit.pl, sf_plane_fit_fixed_mass.planefit.pl: Print summaries. 2007-12-06 22:39 edwards * main/sfpcac/run_tune/build_wloops_xml.csh: Added a nan check. 2007-12-06 17:34 edwards * main/sfpcac/: sf_plane_fit_fixed_mass.cubefit.pl, sf_plane_fit_fixed_mass.planefit.pl: New fit routines. 2007-12-06 16:41 edwards * main/sfpcac/cubefit_driver.cc: Added missing space in printing back out of data. 2007-12-06 16:02 edwards * main/sfpcac/: extract_pion_sq.pl, extract_rho.pl, sub_extract_pion_sq.pl, sub_extract_rho.pl: New extraction scripts. 2007-12-06 14:58 edwards * main/sfpcac/: Makefile.am, cubefit_driver.cc: Added cubefit_driver.cc 2007-12-06 13:33 jbulava * main/stoch/: Makefile.am, stoch_group_baryon.cc, term_funcs.cc, term_funcs.h: [no log message] 2007-12-04 02:44 tag adat1-35-0 2007-12-04 02:44 edwards * docs/adat_threept_api.tex: More stuff. 2007-12-04 02:44 edwards * NEWS: Info on 1.35.0 2007-12-04 02:42 edwards * configure: Induced changes 2007-12-04 02:40 edwards * configure.ac: Changed to 1.35. 2007-12-04 02:30 edwards * docs/adat_threept_api.tex: Final touches. 2007-12-04 02:23 edwards * docs/adat_threept_api.tex: More stuff added. 2007-12-04 02:00 edwards * docs/adat_threept_api.tex: More fixes. 2007-12-04 01:55 edwards * docs/adat_threept_api.tex: First version. 2007-12-04 00:26 edwards * main/formfac/build_cache.ini.xml: Another test case. 2007-12-04 00:22 edwards * main/formfac/: build_cache.cc, build_cache.ini.xml: Final fixes. 2007-12-04 00:12 edwards * main/formfac/build_cache.ini.xml: Added "U" and "D" character insertion. 2007-12-04 00:11 edwards * main/formfac/build_cache.cc: Added insertion of U & D filename. 2007-12-04 00:10 edwards * main/formfac/build_cache.ini.xml: Added insertion of "U" or "D" into filename. 2007-12-03 23:46 edwards * main/formfac/: build_cache.cc, build_cache.ini.xml: Fixes. 2007-12-03 23:23 edwards * include/formfac/formfac_manage_3pt.h: Added read/write of ThreePtArg struc. 2007-12-03 23:21 edwards * main/formfac/: build_cache.cc, build_cache.ini.xml: New program to build up a cache file. Also an input file. 2007-12-03 23:20 edwards * main/formfac/Makefile.am: Added build_cache. 2007-12-02 22:40 edwards * main/sfpcac/: sf_plane_fit_fixed_mass_xi_g_f.intersect.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.bare.plot.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl: Rearranged color construction. 2007-11-30 10:08 edwards * main/sfpcac/: crude_pcac_spacing_extract.pl, crude_pcac_spacing_pion_extract.pl, crude_pcac_spacing_pion_extract_dir_non.pl, extract_pcac.pl: Fixed subroutine names. 2007-11-30 10:05 edwards * main/sfpcac/: crude_pcac_extract.pl, crude_pcac_spacing_extract.pl, crude_pcac_spacing_pion_extract.pl, crude_pcac_spacing_pion_extract_dir_non.pl, extract_pcac.pl, pcac_extract.pl, sub_extract_pcac.pl: Rearranged extract_pcac files. 2007-11-30 09:33 edwards * main/sfpcac/run_tune/: copy_and_clean_to_cache.pl, copy_to_cache.pl: More variants on cache copy scripts. 2007-11-29 17:07 edwards * main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.intersect.pl: Changed legend size. 2007-11-29 17:06 edwards * main/sfpcac/wilslp_reader.cc: Changed to read wilson loop from group elem[1]. 2007-11-29 17:05 edwards * main/sfpcac/run_tune/build_xml.csh: Add in unsmeared wilson loops 2007-11-29 14:40 edwards * main/sfpcac/run_tune/copy_and_clean_to_cache.pl: Do not remove last file. 2007-11-29 14:37 edwards * main/sfpcac/run_tune/copy_and_clean_to_cache.pl: New script 2007-11-29 14:23 edwards * main/sfpcac/run_tune/copy_and_clean_previous_lime.pl: Copy and clean files. 2007-11-27 23:16 edwards * main/sfpcac/: sf_plane_fit_fixed_mass_xi_g_f.intersect.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.bare.plot.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.pl: More changes for intersections. 2007-11-27 23:16 edwards * main/sfpcac/run_tune/copy_previous_lime.pl: Turned off check of directory - doesn't work on non-nfs mounted machines. 2007-11-27 09:43 edwards * main/sfpcac/run_tune/copy_previous_lime.pl: Added a directory check. 2007-11-26 11:55 edwards * main/sfpcac/extract_xi_f.pl: Print Q as well. 2007-11-26 11:54 edwards * main/sfpcac/sub_extract_xi_f.pl: Fixed bug in E2 calculation. Now also return Q. 2007-11-26 00:51 edwards * main/sfpcac/sub_extract_xi_f.pl: Fixed bug in producing diagnostic (not used) E2 file. 2007-11-20 23:46 edwards * main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl: Now write gamma_g,gamma_f. Have a fit line as well. 2007-11-20 23:27 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Make sure plaquettes stay in out.xml file. 2007-11-20 23:27 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Now accept gamma_{g,f} as well as xi_0 and nu in the HMCParam group. 2007-11-20 11:35 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: No longer use the coeff_syz filde. 2007-11-18 19:38 edwards * main/sfpcac/: sf_plane_fit_fixed_mass_xi_g_f.joint.bare.plot.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl: Fiddled with legend sizes. 2007-11-18 19:30 edwards * main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl: Fancier symbol names. 2007-11-18 17:34 edwards * main/sfpcac/sf_plane_fit_fixed_mass_xi_g_f.intersect.pl: Added more sorting on bare params. 2007-11-18 16:38 edwards * main/sfpcac/: sf_plane_fit_fixed_mass_xi_g_f.intersect.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.bare.plot.pl: Fixes. 2007-11-18 14:22 edwards * main/sfpcac/: sf_plane_fit_fixed_mass_xi_g_f.intersect.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.bare.plot.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.pl, sf_plane_fit_fixed_mass_xi_g_f.joint.renorm.plot.pl, xi_g_f_fixed_xi_0.joint.pl, xi_g_f_fixed_xi_0.joint.plot.grace1.pl: Rearrange scripts for plotting and joint fitting. 2007-11-17 17:15 edwards * main/sfpcac/xi_g_f_fixed_xi_0.joint.pl: Fixed to use files. 2007-11-17 16:27 edwards * main/sfpcac/sub_extract_xi_g.pl: Added in hook to call appropriate wilslp_ratio based on filename. 2007-11-17 14:52 edwards * main/sfpcac/sub_extract_xi_f.pl: Put in a hook to test for filenames in jack*pion files, and run the appropriate extractor. 2007-11-17 14:39 edwards * main/sfpcac/sub_extract_xi_f.pl: Fixed typo in number of lines. 2007-11-17 14:39 edwards * main/sfpcac/: sub_extract_xi_f.pl, extract_xi_f.pl: Fixed some more typos. Now seems to work. 2007-11-17 13:47 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, run_launch_sp.pl: Now support copy to cache directories. 2007-11-17 13:47 edwards * main/sfpcac/sub_extract_xi_f.pl: Fixes. 2007-11-17 13:28 edwards * main/sfpcac/sub_extract_xi_g.pl: Trim some more the filenames. 2007-11-17 13:27 edwards * main/sfpcac/extract_xi_g.pl: Fixed to use sub_extract_xi_f.pl 2007-11-17 13:25 edwards * main/sfpcac/sub_extract_xi_f.pl: Removed use of other scripts. Now all internal. 2007-11-16 13:38 edwards * main/sfpcac/wilslp_ratio.cc: Write out the renormalized gauge aniso to a munged filename. 2007-11-16 13:34 edwards * main/sfpcac/: disp_xi_f.cc, extract_xi_f.pl, extract_xi_g.pl, make_sideways_aniso.pl, sideways_aniso.pl, sub_extract_xi_f.pl, sub_extract_xi_g.pl, xi_g_f_fixed_xi_0.joint.pl, xi_g_f_fixed_xi_0.joint.plot.grace1.pl: Renamed sideways_aniso scripts. Added writing xi_f to disp_x_f. Reordered output of xi_g and xi_f files. 2007-11-15 05:15 edwards * main/sfpcac/xi_g_f_fixed_xi_0.joint.plot.grace1.pl: Revamped to take one of the "joint" files. 2007-11-15 04:23 edwards * main/sfpcac/xi_g_f_fixed_xi_0.joint.plot.grace1.pl: Small cleanups. 2007-11-15 04:04 edwards * main/sfpcac/xi_g_f_fixed_xi_0.joint.plot.grace1.pl: Plot script. 2007-11-15 03:42 edwards * main/sfpcac/: extract_xi_f.pl, make_disp_xi_f.pl, sub_extract_xi_f.pl, xi_g_f_fixed_xi_0.joint.pl: Extract gauge and fermion anisotropies. 2007-11-15 02:14 edwards * main/sfpcac/disp_xi_f.cc: I don't really understand why the errors seem to come out so small - might be correct - correlations in the original data. However, don't do any rescaling and instead do direct fits. 2007-11-15 02:01 edwards * main/sfpcac/disp_xi_f.cc: Fixes. 2007-11-15 01:43 edwards * main/sfpcac/: Makefile.am, chisqq.cc, chisqq.h, disp_xi_f.cc, linefit.cc: Added disp_xi_f and chisqq. Split off chisqq from linefit. 2007-11-15 00:54 edwards * main/sfpcac/: make_sideways_aniso.pl, sideways_aniso.pl: Compute gauge anisotropy. 2007-11-14 23:58 edwards * main/sfpcac/wilslp_ratio.cc: Print out number of data points. 2007-11-12 17:08 edwards * main/sfpcac/run_tune/build_unsmeared_wloops_xml.csh: Package unsmeared loops 2007-11-12 10:59 edwards * main/strippers/strip_hadspec.cc: Change names of baryon files on output in different cases of M_1 > M_2 or M_1 < M_2. 2007-10-30 00:25 edwards * main/sfpcac/sf_plane_fit_mass_nu.space.joint.compare.m.csh: Useful script. 2007-10-30 00:22 edwards * main/sfpcac/sf_plane_fit_mass_nu.make_plots.csh: Removed tmp from path. 2007-10-29 23:02 edwards * main/sfpcac/wilslp_reader.cc: Moved path of WilsonLoop back again to position [3]. 2007-10-29 21:21 edwards * main/sfpcac/Makefile.am: Moved sf_cube_fit_mass_nu_xi back off to EXTRA programs. 2007-10-29 12:47 edwards * aclocal.m4, configure: Induced changes 2007-10-27 17:19 edwards * other_libs/c-lime/configure: Induced changes 2007-10-27 17:19 edwards * other_libs/c-lime/include/lime_config_internal.h.in: Induced changes. 2007-10-27 17:15 edwards * other_libs/: xpath_reader/AUTHORS, xpath_reader/COPYING, xpath_reader/INSTALL, xpath_reader/Makefile.am, xpath_reader/NEWS, xpath_reader/README, xpath_reader/ToDoList, xpath_reader/acinclude.m4, xpath_reader/aclocal.m4, xpath_reader/configure, xpath_reader/configure.ac, c-lime/aclocal.m4, c-lime/configure: Induced changes 2007-10-27 10:49 edwards * main/sfpcac/sf_single_mass.cc: Fixed numElems for Z_P. 2007-10-27 10:48 edwards * main/sfpcac/sf_reader.cc: Added sign flipping of correlators. These neg. signs are caused by commutations of gamma matrices. 2007-10-25 23:43 edwards * main/sfpcac/sf_single_mass.cc: Added Z_m. 2007-10-25 23:31 edwards * main/sfpcac/sf_single_mass.cc: Added Z_m. 2007-10-25 23:15 edwards * main/sfpcac/xi_extract.pl: Pretty version of \xi extractor. 2007-10-25 23:04 edwards * lib/io/adat_qdpio.cc: Fixed read of a BinaryBufferReader. 2007-10-21 23:30 kostas * main/utils/block_proplist.cc: fixed a bug in block utility 2007-10-19 21:05 edwards * main/sfpcac/: q_mass.h, sf_reader.cc, sf_reader.h, sf_single_mass.cc: Added Z_V and Z_A measurements. 2007-10-19 21:05 edwards * main/sfpcac/run_tune/Z.csh: Read and write more things. 2007-10-19 21:04 edwards * main/sfpcac/wilslp_reader.cc: Switch the group that is read for WilsonLoop. 2007-10-19 16:07 edwards * main/sfpcac/run_tune/Z.csh: Updates. 2007-10-19 15:54 edwards * main/sfpcac/sf_single_mass.cc: Added printing of c_A, M_1,M_2, and dM. 2007-10-19 15:53 edwards * main/sfpcac/run_tune/: Z.csh, Z_A.xsl, Z_V.xsl: New scripts. 2007-10-18 16:39 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Changed xi_mom to be the desired renormalized anisotropy. It was fixed to 3 before. 2007-10-18 16:38 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Fixed how x0 and y0 are computed. Changed xi_mom to be the anisotropy. 2007-10-12 00:07 edwards * main/sfpcac/run_tune/coeffs_syz.pl: No stout version. 2007-10-08 09:36 edwards * configure: Induced changes 2007-10-08 09:36 edwards * aclocal.m4: Induced changes. 2007-10-08 09:34 edwards * main/sfpcac/run_tune/copy_previous_lime.pl: Put in a "-p" in the rcp command. 2007-10-08 09:34 edwards * main/sfpcac/run_tune/continue_copy_hmc.pl: Some more fixes. 2007-10-06 15:22 edwards * main/sfpcac/run_tune/continue_copy_hmc.pl: Copy and clean out configs. 2007-10-06 15:14 edwards * main/sfpcac/run_tune/copy_previous_lime.pl: Copy to permanent storage configs. 2007-10-06 15:14 edwards * main/sfpcac/run_tune/run_hmc.pl: Put in a check of a file path. 2007-10-06 00:04 tag qdp1-25-1 2007-10-06 00:04 kostas * aclocal.m4, main/utils/Makefile.am, main/utils/jack_fit.cc, main/utils/jack_fit.ini.xml, other_libs/c-lime/aclocal.m4: added a jack_fit util to make ensemble files of masses. 2007-10-03 23:12 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Put if statement around hadron spectrum calculations. 2007-10-03 22:37 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Fixed frequency use in MESONSPEC. 2007-09-29 01:46 edwards * main/sfpcac/run_tune/tune_param_nf3_syz.pl: Added deriv_length. 2007-09-29 01:46 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Added support for derivative sources. Restructured loop over hadspec and new mesonspec to aggregate all measurements to within a single hadspec and mesonspec xml file. 2007-09-29 01:45 edwards * main/strippers/strip_mesonspec.cc: Added support for SF source/sinks. Collapsed down test of sources and sinks. 2007-09-29 00:03 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, tune_param_nf3_syz.pl: New input variables for ZV and ZA. 2007-09-28 21:36 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Fixed up ZA. 2007-09-27 17:52 edwards * main/sfpcac/run_tune/tune_param_nf3_syz.pl: New version of input. 2007-09-27 17:51 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Lots of little fixes. Now appears to work. 2007-09-27 16:57 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Fixed FermState in hadspec measurements. Added theta as a variable. 2007-09-27 16:51 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Added hadspec measurements using SF source/sinks. 2007-09-27 16:39 edwards * main/sfpcac/: crude_pcac_extract.pl, crude_pcac_spacing_extract.pl, crude_pcac_spacing_pion_extract.pl, crude_pcac_spacing_pion_extract_dir_non.pl, make_qpot_spacing.pl, qpot_spacing.pl: Pass in min and max r_0. 2007-09-26 23:07 edwards * main/sfpcac/crude_pcac_spacing_pion_extract.pl: Added calculation of m_pi*r_0. 2007-09-26 22:37 edwards * main/sfpcac/crude_pcac_spacing_pion_extract_dir_non.pl: Added computation of m_pi*r_0 2007-09-26 22:23 edwards * main/sfpcac/crude_pcac_spacing_pion_extract_dir_non.pl: Some more little fixes. 2007-09-26 21:17 edwards * main/sfpcac/: crude_pcac_spacing_pion_extract.pl, fit_pcac_pion.pl, pion_mass_extract.pl: Made pion_mass_extract take an explicit input file. 2007-09-26 13:25 edwards * main/sfpcac/crude_pcac_spacing_pion_extract_dir_non.pl: Allow for a dirichlet computation of spectrum and spacing, and a non-pt determination of the PCAC mass. 2007-09-26 13:23 edwards * main/sfpcac/: crude_pcac_extract.pl, crude_pcac_spacing_extract.pl, crude_pcac_spacing_pion_extract.pl, pcac_extract.pl: Made the input file for pcac explicit. 2007-09-25 22:25 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Turned on ZV. 2007-09-25 11:02 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Changed to always have a bc type stem. 2007-09-24 23:28 edwards * main/sfpcac/run_tune/: coeffs_syz.pl, compute_coeffs_syz.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Switched to using the Pade form for tadpole factors. 2007-09-24 23:10 edwards * main/sfpcac/: crude_pcac_spacing_pion_extract.pl, pion_mass_extract.pl: More hacks to get to run on the region of interest. Also, make it stable. 2007-09-23 14:33 edwards * main/sfpcac/crude_pcac_spacing_pion_extract.pl: Also fit pion. 2007-09-23 14:20 edwards * main/sfpcac/pion_mass_extract.pl: Removed some debugging output, changed fit regions. 2007-09-23 01:13 edwards * main/sfpcac/pion_mass_extract.pl: Calls run_single only. 2007-09-23 00:44 edwards * main/sfpcac/pion_mass_extract.pl: Now handles the case when the run_fit was successful. 2007-09-23 00:41 edwards * main/sfpcac/: fit_pcac_pion.pl, pion_mass_extract.pl: Modified versions. 2007-09-23 00:08 edwards * main/sfpcac/pion_mass_extract.pl: First version of pion mass extractor. 2007-09-22 23:45 edwards * main/sfpcac/sf_single_mass.cc: Changed output file names for ensemble files. 2007-09-22 22:05 edwards * main/sfpcac/pcac_extract.pl: New analysis file. 2007-09-22 22:05 edwards * main/sfpcac/: crude_pcac_extract.pl, crude_pcac_spacing_extract.pl, make_qpot_spacing.pl, qpot_spacing.pl: New analysis files. 2007-09-21 15:16 edwards * main/sfpcac/qpot_chisq.cc: Compute r_1. 2007-09-21 15:16 edwards * main/sfpcac/make_qpot_spacing.pl: More tests and output. 2007-09-21 14:59 edwards * main/sfpcac/: make_qpot.csh, make_qpot_spacing.pl: New scripts for computing potential. 2007-09-21 14:37 edwards * main/sfpcac/qpot_chisq.cc: Changed output of d_low to its proper d_up in the fprintf statements. 2007-09-21 13:36 edwards * main/sfpcac/sf_single_mass.cc: Print out number of data points. 2007-09-21 13:36 edwards * main/sfpcac/crude_pcac_extract.pl: Extract pcac mass. 2007-09-21 10:06 edwards * main/sfpcac/run_tune/clean_previous_lime.pl: Changed usage output. 2007-09-21 10:06 edwards * main/sfpcac/run_tune/coeffs_syz.pl: Commented out aniso failure 2007-09-21 10:05 edwards * main/sfpcac/run_tune/: build_chroma_xml.csh, build_xml.csh: Moved files around. 2007-09-18 00:43 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Bug fix in final iteration loop. 2007-09-17 09:35 edwards * main/sfpcac/run_tune/: x3p5_n1_r0p14_u_s.dat, x3p5_n1_r0p14_u_s_st.dat: 1 smearing versions of tadpole factors. 2007-09-16 22:08 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Changed to using the spline version of u_s and u_s_stout. Will fit to a Pade later. 2007-09-16 21:54 edwards * main/sfpcac/run_tune/: coeffs_syz.pl, compute_coeffs_syz.pl, x3p5_n2_r0p14_u_s.dat, x3p5_n2_r0p14_u_s_st.dat: New spline version of u_s and u_s_stout for xi=3.5, n=2,rho=0.14 . 2007-09-15 16:18 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Added an iterative loop for u_s. 2007-09-13 22:56 edwards * main/sfpcac/run_tune/: run_hmc.pl, run_tune_syz.pl: Moved rerunning in case of timeout to run_hmc.pl 2007-09-13 17:32 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Fixed (hopefully) the run_hmc grepping for RPC timeouts 2007-09-13 17:22 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Bug fix in system call. 2007-09-13 17:13 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Try a sleeping version of run_hmc. 2007-09-13 16:53 edwards * main/sfpcac/run_tune/coeffs_syz.pl: Added n_rho=2 and rho=0.14 2007-09-13 16:51 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Stuck in a comment. 2007-09-13 16:35 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Further fine tunings of the bisection method. 2007-09-13 15:38 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Added a u_s_low and u_s_high. 2007-09-13 15:27 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Switched to using bisection. 2007-09-13 15:27 edwards * main/sfpcac/run_tune/print_hmc_param.pl: Added a () around a my list. 2007-09-13 11:06 edwards * main/sfpcac/run_tune/run_launch_syz.pl: Print beta. 2007-09-13 11:06 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol_taditer_unprec.pl: Changed to UNPREC instead of EOPREC. 2007-09-13 00:13 edwards * main/sfpcac/run_tune/generate_nf3_syz_taditer.pl: Fixed beta. 2007-09-13 00:00 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol_taditer_unprec.pl: New unpreconditioned tadpole version. 2007-09-12 23:54 edwards * main/sfpcac/run_tune/generate_nf3_syz_taditer.pl: Removed last vestigage of beta_resc. 2007-09-12 23:45 edwards * main/sfpcac/run_tune/run_launch_syz.pl: Run non-SF codes. 2007-09-12 23:37 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Removed beta rescale factor stuff. 2007-09-12 23:12 edwards * main/sfpcac/run_tune/coeffs_syz.pl: Send back the original u_s and u_s_stout in chen_tapdole_ut1 2007-09-12 23:11 edwards * main/sfpcac/run_tune/generate_nf3_syz_taditer.pl: New generation code. 2007-09-12 23:10 edwards * main/sfpcac/run_tune/coeffs_syz.pl: Added chen_tadpole_ut1 2007-09-12 22:02 edwards * main/sfpcac/run_tune/: run_tune_sp.pl, run_tune_syz.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Changed usage output. 2007-09-11 10:54 edwards * main/formfac/operators.cc: Fixed again the location of the MesonOperatorEnv namespace. 2007-09-11 10:50 edwards * main/formfac/operators.cc: Moved OperatorParams to the FF namespace. 2007-09-11 00:53 edwards * include/formfac/formfac_manage_factory.h: Removed some unused include files. 2007-09-11 00:47 edwards * include/formfac/baryon_matrix_elems.h, include/formfac/formfac.h, include/formfac/formfac_bb.h, include/formfac/formfac_manage.h, include/formfac/formfac_manage_2pt.h, include/formfac/formfac_manage_3pt.h, include/formfac/formfac_manage_3pt_bb.h, include/formfac/formfac_manage_3pt_db.h, include/formfac/formfac_manage_3pt_stripped.h, include/formfac/formfac_manage_E.h, include/formfac/formfac_manage_factory.h, include/formfac/formfac_manage_npr.h, include/formfac/formfac_meson_fit.h, include/formfac/formfac_qsq.h, include/formfac/formfac_solver.h, include/formfac/formfac_state.h, include/formfac/matrix_elems.h, include/formfac/matrix_elems_factory.h, include/formfac/meson_matrix_elems.h, lib/formfac/ff_bb.cc, lib/formfac/ff_lsq.cc, lib/formfac/ff_manage.cc, lib/formfac/ff_manage_2pt.cc, lib/formfac/ff_manage_3pt.cc, lib/formfac/ff_manage_3pt_bb.cc, lib/formfac/ff_manage_3pt_db.cc, lib/formfac/ff_manage_3pt_stripped.cc, lib/formfac/ff_manage_E.cc, lib/formfac/ff_meson_fit.cc, lib/formfac/ff_mom_list.cc, lib/formfac/ff_util.cc, lib/formfac/matrix_elems.cc, lib/formfac/meson_matrix_elems.cc, main/formfac/baryon_matrix_elems.h, main/formfac/matrix_elems.cc, main/formfac/matrix_elems.h, main/formfac/matrix_elems_factory.h, main/formfac/meson_matrix_elems.cc, main/formfac/meson_matrix_elems.h: Split apart formfac manage codes. Moved around the start of the new meson_fit and beginnings of baryon_fit codes. 2007-09-11 00:45 edwards * include/Makefile.am, lib/Makefile.am: Split apart formfac manage class. Rearranged some of the new matrix elements code as well. 2007-09-11 00:44 tag adat1-34-0 2007-09-11 00:44 edwards * NEWS: Info on 1.34. 2007-09-11 00:40 edwards * aclocal.m4, configure: Induced changes 2007-09-11 00:39 edwards * configure.ac: Changed to 1.34 2007-09-09 00:45 uid3790 * include/ensem/ensem_simpleword.h: Added isFinite. 2007-09-09 00:43 uid3790 * include/ensem/ensem_simpleword.h: Put std:: namespace qualifiers on isnan and isinf. 2007-09-08 21:14 edwards * main/sfpcac/run_tune/: coeffs_syz.pl, compute_coeffs_syz.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl, xi_3.5_n_1_spatial.dat, xi_3.5_n_1_temporal.dat, xi_3.5_n_2_spatial.dat, xi_3.5_n_2_temporal.dat, xi_3.5_n_3_spatial.dat, xi_3.5_n_3_temporal.dat: Moved computation of tadpole factors, etc. into a single file. Added a spline functionality for the tables of pt coeffs. that are now available. 2007-09-06 13:08 edwards * main/sfpcac/run_tune/compute_coeffs_syz.pl: Fixed the setting of plaq_{s,t}_stout for xi=3.5, n_rho=2, rho=0.22 2007-09-03 22:23 uid3790 * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Got rid of ".meas" from xml_file names for wloops. 2007-09-03 16:32 uid3790 * main/sfpcac/run_tune/extract_tadpoles.csh: Added dropping of data. 2007-09-03 16:31 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Fixed my old way of setting plaq_s_sm in n_rho=2,rho=0.22 case. 2007-09-02 23:00 uid3790 * main/sfpcac/run_tune/: compute_tadpoles.csh, extract_tadpoles.csh: Helps print-out tadpole factors. 2007-09-02 23:00 uid3790 * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Changed xml_file to point to smeared/unsmeared filenames. 2007-09-02 17:59 edwards * main/sfpcac/run_tune/extract_tadpoles.csh: Extract tadpole factors. 2007-09-02 17:36 edwards * main/sfpcac/run_tune/: compute_coeffs_syz.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Split smeared and unsmeared coeffs into separate structs. Now must pass in the n_smear & rho. 2007-09-01 19:40 uid6503 * lib/covfit/proplist.cc, main/strippers/strip_hadspec.cc, main/utils/merge_proplists.cc: Corrected: 1) compilation issues lib/covfit/proplist.cc main/utils/merge_proplists.cc 2) error in source-sink parsing main/strippers/strip_hadspec.cc 2007-09-01 01:12 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Now passes in n_rho and rho to compute coefficients. 2007-08-30 00:17 tag c-lime1-3-1 2007-08-30 00:17 tag qdp1-24-6 2007-08-30 00:17 tag qdp1-25-0 2007-08-30 00:17 edwards * other_libs/c-lime/NEWS: Info on 1.3.1 2007-08-30 00:14 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes 2007-08-30 00:13 edwards * other_libs/c-lime/configure.ac: Changed to 1.3.1 2007-08-29 23:20 uid3790 * other_libs/c-lime/lib/: lime_reader.c, lime_utils.c, lime_writer.c: Changed all printf's to also write the name of the encompassing function. 2007-08-28 00:37 uid3790 * main/strippers/strip_hadspec.cc: Fixed filenames of currents. Added support for SF sources. 2007-08-27 17:27 edwards * main/strippers/strip_hadspec.cc: Fixed a typo. 2007-08-27 17:26 edwards * main/strippers/strip_hadspec.cc: Changed to support SF_{POINT,SHELL,WALL}_SOURCE 2007-08-24 00:09 edwards * main/sfpcac/run_tune/build_wloops_xml.csh: Builds smeared wilson loops. 2007-08-23 17:04 edwards * main/sfpcac/qpot_chisq.cc: Some more cleanups using isNaN. 2007-08-23 16:49 edwards * main/sfpcac/qpot_chisq.cc: Put in more isNaN functions. Now can test on an ensemble. 2007-08-23 16:49 edwards * include/ensem/: ensem_ensem.h, ensem_obsscalar.h, ensem_primscalar.h, ensem_reality.h, ensem_simpleword.h: Added isNaN, isInf and isFinite functions. 2007-08-23 00:39 edwards * main/sfpcac/sf_single_mass.cc: Write the stripped data. 2007-08-23 00:39 edwards * main/sfpcac/qpot.cc: Added printing of data size. 2007-08-17 23:32 edwards * main/stoch/stoch_baryon.cc: Removed some commented out stuff. 2007-08-17 23:31 uid3790 * include/io/adat_qdpio.h, lib/io/adat_qdpio.cc: Code now works! 2007-08-17 23:30 uid3790 * main/ensem/: Makefile.am, hadspec.lime, t_qio.cc: Added t_qio and tests of new IO package. 2007-08-10 23:22 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, run_launch_sp.pl, tune_param_nf3_syz.pl: Added bc_type. 2007-08-10 23:19 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Added qcd7ni01 2007-08-09 23:00 edwards * main/sfpcac/wilslp_reader.cc: Changed path back. 2007-08-09 17:28 edwards * main/sfpcac/wilslp_reader.cc: Changed xpath to the actual wilsonloop data which will be in position 3. 2007-08-09 14:19 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Fixed use of named_obj. 2007-08-09 11:18 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Changed frequency in measurement of WILSLP. 2007-08-08 22:54 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Added smeared wilson loops for use in qpot. 2007-08-07 00:04 edwards * main/sfpcac/: sf_cube_fit_mass_nu_xi.math.xsl, sf_plane_fit_mass_nu.make_plots.csh, sf_plane_fit_mass_nu.math.joint.compare.m.csh, sf_plane_fit_mass_nu.math.joint.pl, sf_plane_fit_mass_nu.plot.grace1.pl, sf_plane_fit_mass_nu.space.joint.pl, sf_plane_fit_mass_nu.time.joint.compare.m.csh, sf_plane_fit_mass_nu.time.joint.pl: Rearranged files and output files. 2007-08-06 22:49 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added output of M_space_div_xi_g 2007-08-06 12:17 edwards * main/sfpcac/sf_plane_fit_mass_nu.cc: Added M_s/xi_r. 2007-07-31 13:58 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Reorg of output shell script. 2007-07-31 13:57 edwards * main/sfpcac/run_tune/compute_coeffs_syz.pl: Added a bit more precision. 2007-07-31 13:57 edwards * main/sfpcac/run_tune/continue_noclean_hmc.pl: New cleanup script. 2007-07-31 13:56 edwards * main/sfpcac/: sf_plane_fit_mass_nu.make_plots.csh, sf_plane_fit_mass_nu.math.joint.pl, sf_plane_fit_mass_nu.plot.grace1.pl: Added dM to output. 2007-07-31 13:09 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Made loop over multiple time sources for spectrum calculation. Made variables for lowerMin/upperMax instead of fixed values. 2007-07-31 13:08 edwards * include/io/adat_qdpio.h: Removed unnecessary include. 2007-07-19 12:36 edwards * main/strippers/strip_hadspec.cc: Changed to read/write correlators in double precision. 2007-07-19 12:35 edwards * main/strippers/strippers.h: Added a ComplexD. 2007-07-17 21:49 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Make ev bounds a little less conservative. 2007-07-17 21:41 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Set lower eigenvalue lower. 2007-07-17 21:41 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Reset repro freq. 2007-07-17 14:27 edwards * main/sfpcac/: sf_plane_fit_mass_nu.math.joint.compare.csh, sf_plane_fit_mass_nu.math.joint.compare.m.csh, sf_plane_fit_mass_nu.math.joint.compare.xi.csh: Changed to be a plot maker of M_s,M_T and xi 2007-07-17 12:56 tag qdp1-24-2 2007-07-17 12:56 tag qdp1-24-3 2007-07-17 12:56 tag qdp1-24-4 2007-07-17 12:56 tag qdp1-24-5 2007-07-17 12:56 bjoo * other_libs/xpath_reader/: include/basic_xpath_reader.h, lib/basic_xpath_reader.cc: Made some C++ warnings go away 2007-07-17 01:38 uid3790 * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: Added spectroscopy measurements. 2007-07-17 01:16 edwards * main/sfpcac/run_tune/tune_param_nf3_syz.pl: The current syz tune param file. 2007-07-17 01:15 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Changed repro freq to 1. 2007-07-12 11:36 edwards * main/sfpcac/: sf_cube_fit_mass_nu_xi.math.xsl, sf_plane_fit_mass_nu.math.joint.compare.csh, sf_plane_fit_mass_nu.math.joint.pl: Fixed up output some more - put in the number of data points. 2007-07-09 15:00 edwards * main/sfpcac/run_tune/: find_my_dir.pl, find_not_running.pl: Now stand-alone scripts. 2007-07-08 14:17 tag qio2-2-1 2007-07-08 14:17 tag qio2-3-0 2007-07-08 14:17 tag qio2-3-1 2007-07-08 14:17 kostas * aclocal.m4, main/strippers/Makefile.am, main/strippers/strip_staticlight.cc, other_libs/c-lime/aclocal.m4, other_libs/c-lime/configure, other_libs/c-lime/include/lime_config_internal.h.in: added staticlight stripper 2007-07-08 00:17 edwards * main/sfpcac/run_tune/generate_tune_from_math_joint.pl: Print a joint comparison of M_s and M_t 2007-07-08 00:16 edwards * main/sfpcac/run_tune/find_not_running.pl: Print path specified on command line 2007-07-08 00:15 edwards * main/sfpcac/sf_plane_fit_mass_nu.math.joint.compare.csh: Produce axis comparison plots of M_s and M_t 2007-07-08 00:15 edwards * main/sfpcac/sf_plane_fit_mass_nu.math.joint.pl: Print unformatted. 2007-07-07 23:16 edwards * main/sfpcac/sf_plane_fit_mass_nu.make_plots.csh: Fixed path. 2007-07-07 23:10 edwards * main/sfpcac/sf_plane_fit_mass_nu.math.joint.pl: Small improvements. 2007-07-07 22:59 edwards * main/sfpcac/sf_plane_fit_mass_nu.make_plots.csh: Added another joint printout 2007-07-07 22:57 edwards * main/sfpcac/sf_plane_fit_mass_nu.math.joint.pl: Prints joint data. 2007-07-07 22:39 edwards * main/sfpcac/: sf_plane_fit_mass_nu.cc, sf_single_mass.cc: Changed around quark_mass_fit to use only a single slice in z direction. 2007-07-07 17:39 edwards * main/sfpcac/q_mass_dm.cc: Switch to using a q_mass_simple_avg 2007-07-07 17:29 edwards * main/sfpcac/q_mass_dm.cc: Changed to a q_mass_avg instead of q_mass_fit. 2007-07-07 01:01 edwards * main/sfpcac/: Makefile.am, planefit_driver.cc: Added planefit_driver 2007-07-06 01:28 edwards * main/sfpcac/: sf_plane_fit_mass_nu.make_plots.csh, sf_plane_fit_mass_nu.plot.grace1.pl: Print filenames within the plots 2007-07-06 00:52 edwards * main/sfpcac/sf_plane_fit_mass_nu.make_plots.csh: Make physics plots. 2007-07-06 00:03 edwards * main/sfpcac/sf_plane_fit_mass_nu.make_plots.csh: Make postscript plots 2007-07-06 00:01 edwards * main/sfpcac/sf_plane_fit_mass_nu.make_plots.csh: Make physics plots 2007-07-05 22:33 edwards * main/sfpcac/: sf_plane_fit_mass_nu.deviates.pretty.csh, sf_plane_fit_mass_nu.deviates.xsl, sf_plane_fit_mass_nu.make_plots.csh: New way of print plots for plane fits. 2007-07-05 21:51 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.pretty.csh: Fixed up output some more. 2007-07-05 21:45 edwards * main/sfpcac/: sf_cube_fit_mass_nu_xi.pretty.csh, sf_cube_fit_mass_nu_xi.print.xsl: Fixed up the output a bit. 2007-07-05 00:24 edwards * lib/io/adat_qdpio.cc: First version of ADATFileReader. 2007-07-05 00:24 edwards * lib/Makefile.am: Added io/adat_qdpio.cc 2007-07-05 00:23 edwards * include/io/adat_qdpio.h: First compiling code of ADAT's version of QDP's QDPFileReader support. 2007-07-05 00:23 edwards * include/ensem/ensem_traits.h: Added SinglePrec and DoublePrec traits. Also added include guards. 2007-07-05 00:22 edwards * include/Makefile.am: Added io/adat_qdpio.h 2007-07-05 00:14 edwards * lib/io/adat_io.cc, lib/io/adat_qdpio.cc, include/io/adat_qdpio.h: First version with writes. 2007-06-29 19:59 edwards * main/sfpcac/run_tune/find_not_running.pl: Fix. 2007-06-29 18:24 edwards * main/sfpcac/run_tune/find_not_running.pl: Check if arg is a directory. 2007-06-29 18:24 edwards * main/sfpcac/run_tune/wils_loop.xsl: Print wilson loops 2007-06-23 12:36 edwards * main/sfpcac/run_tune/find_not_running.pl: Print dirs not in the run list. 2007-06-22 15:38 edwards * main/sfpcac/sf_plane_fit_mass_nu.plot.grace1.pl: Added printing of xi 2007-06-22 15:37 edwards * main/sfpcac/sf_plane_fit_mass_nu.plot.grace1.pl: Fixed labelling. 2007-06-22 15:35 edwards * main/sfpcac/wilslp_ratio.cc: Print final number of jackknife bins. 2007-06-22 15:35 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Crank up repro checks. 2007-06-22 15:34 edwards * main/sfpcac/run_tune/run_hmc.pl: Interchange order of gzip of out.xml 2007-06-21 14:18 edwards * include/io/adat_io.h, lib/formfac/ff_bb.cc, lib/io/adat_io.cc, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_wallformfac.cc: Changed BinaryReader/Writer class to be abstract, with new Binary{Buffer,File}{Reader,Writer} derived classes. This structure mirrors that in QDP++. 2007-06-21 14:16 edwards * other_libs/xpath_reader/include/: Makefile.am, xml_array3d.h: Added 3d array. 2007-06-20 16:28 edwards * docs/building_block_sizes.tex: Some info on Building-Blocks. 2007-06-20 14:36 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Turn on automatic reproducibility. 2007-06-20 10:34 edwards * main/sfpcac/run_tune/generate_tune_from_phys.pl: Takes a "physics output" list and makes a subroutine for use in the tune_param files. 2007-06-19 00:21 edwards * main/sfpcac/sf_plane_fit_mass_nu.plot.grace1.pl: Plot M_s vs M_t. 2007-06-18 22:29 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Moved where tmp_status is captured in the generated shell-script. 2007-06-18 22:28 edwards * main/sfpcac/run_tune/continue_hmc.pl: Return error code. 2007-06-18 22:28 edwards * main/sfpcac/run_tune/clean_previous_lime.pl: Changed a system call to unlink 2007-06-18 22:28 edwards * main/sfpcac/run_tune/build_xml.csh: Can now deal with nested subdirs. 2007-06-18 11:25 tag qio2-2-0 2007-06-18 11:25 detar * other_libs/c-lime/: aclocal.m4, configure, include/lime_config_internal.h.in: Redo aclocal and automake to fix configure and Makefile.in 2007-06-14 09:20 edwards * include/io/adat_xmlio.h, lib/io/adat_xmlio.cc: Added some error checks if files already opened. 2007-06-14 00:20 edwards * main/sfpcac/Makefile.am: Added sf_plane_fit_mass_nu 2007-06-14 00:20 edwards * main/sfpcac/sf_plane_fit_mass_nu.cc: Fit only mass and nu holding xi fixed. 2007-06-09 18:13 tag c-lime1-3-0 2007-06-09 18:13 tag qdp1-24-0 2007-06-09 18:13 tag qdp1-24-1 2007-06-09 18:13 edwards * other_libs/c-lime/include/lime_config_internal.h.in: Induced changes. 2007-06-09 18:12 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes 2007-06-09 18:11 edwards * other_libs/c-lime/configure.ac: Changed to 1.3.0 2007-06-09 18:08 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes 2007-06-08 14:22 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, run_launch_sp.pl, tune_param_nf3_syz.pl: Put loop_extent solely under control of the generate code. Fixed loop_extent in the generate routine. 2007-06-07 12:18 tag adat1-33-0 2007-06-07 12:18 edwards * NEWS: Info on 1.33.0 2007-06-07 12:15 edwards * main/formfac/thin_bb.cc: Small fix. Appears to work. 2007-06-07 12:14 edwards * lib/formfac/ff_bb.cc: Some fixes. Appears to work. 2007-06-07 11:26 edwards * aclocal.m4, configure: Induced changes 2007-06-07 11:26 edwards * configure.ac: Changed to 1.33 2007-06-07 11:26 edwards * lib/formfac/ff_bb.cc: Added BuildingBlocks writer and a BuildingBlocks thinner routine. 2007-06-07 11:25 edwards * include/formfac/formfac_bb.h: Added thinBB 2007-06-07 11:25 edwards * main/formfac/thin_bb.cc: Building blocks thinner. 2007-06-07 11:24 edwards * main/formfac/Makefile.am: Added thin_bb 2007-06-07 10:46 tag adat1-32-0 2007-06-07 10:46 edwards * NEWS: Info on 1.32.0 2007-06-06 17:14 edwards * main/sfpcac/run_tune/: compute_coeffs_syz.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Added in modified version of pt coeffs. 2007-06-06 00:18 edwards * main/sfpcac/wilslp_ratio.cc: Print maxr and maxt. 2007-06-05 23:59 edwards * main/sfpcac/wilslp.ini.xml: Removed nboot 2007-06-05 23:58 edwards * main/sfpcac/wilslp_ratio.cc: Small compilation fix. 2007-06-05 23:56 edwards * main/sfpcac/: wilslp.ini.xml, wilslp_ratio.cc: Added data_params and xi_params. 2007-06-04 16:18 edwards * aclocal.m4, configure: Induced changes 2007-06-04 16:16 edwards * configure: Changed to 1.32. 2007-06-04 16:15 edwards * configure.ac: Changed to 1.32 2007-06-04 15:59 edwards * aclocal.m4, configure: Induced changes 2007-06-04 15:57 edwards * Makefile.am: Put main back in srcs and default compilation. 2007-06-04 15:57 edwards * main/formfac/: pion_pion_fit_cons.cc, pion_pion_fit_cons_exc.cc, rho_pion_fit_cons_exc.cc: Changed Manage3PtFunc to Manage3PtFuncBB 2007-06-04 15:56 edwards * main/Makefile.am: Added all relevant dirs to build in srcs. 2007-06-04 15:55 edwards * main/: fitters/Makefile.am, formfac/Makefile.am, mres/Makefile.am, spectrum/Makefile.am, strippers/Makefile.am, ttt/Makefile.am, utils/Makefile.am: Made build process similar among all subdirs. Now, all programs are bin_PROGRAMS and all use the dependencies on libadat.a . 2007-06-02 14:08 edwards * main/sfpcac/run_tune/: compute_coeffs_syz.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Fixed xi=3.5 coeffs to the correct values from Justin Foley. 2007-06-01 09:53 edwards * main/sfpcac/wilslp_ratio.cc: Print file name. 2007-05-31 22:29 edwards * main/sfpcac/run_tune/: run_launch_sp.pl, tune_param_nf3_syz.pl: Made loop_extent a part of the iterated structure. 2007-05-31 21:21 edwards * main/sfpcac/run_tune/: run_tune_sp.pl, run_tune_syz.pl, tune_remez.pl: Changed lowest "zero" ev bound to 1.0e-5 instead of 1.0e-4. 2007-05-31 15:43 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Put back in setting of lowerMin and upperMax. 2007-05-31 15:00 edwards * main/sfpcac/run_tune/generate_nf3_syz.pl: Fix to c_s tadpole factors. 2007-05-31 14:47 edwards * main/sfpcac/run_tune/: compute_coeffs_syz.pl, generate_nf3_syz_largevol.pl: More updates to pt coeffs. 2007-05-31 14:45 edwards * main/sfpcac/run_tune/: compute_coeffs_syz.pl, generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Updated coefficients. 2007-05-31 09:38 edwards * main/sfpcac/run_tune/acc.xsl: Extract acceptance rate. 2007-05-30 21:59 edwards * main/sfpcac/run_tune/tune_remez.pl: Print original bounds before rescaling. 2007-05-30 21:11 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Adjusted eigen bounds. 2007-05-30 21:10 edwards * main/sfpcac/run_tune/tune_remez.pl: Put a test on local_max eig bnd to avoid cases where there are no real bounds in the file. 2007-05-30 17:11 edwards * main/sfpcac/run_tune/: run_tune_sp.pl, run_tune_syz.pl, tune_remez.pl: Added a 10% safety bounds on the evs. 2007-05-30 16:04 edwards * main/sfpcac/run_tune/: run_tune_sp.pl, run_tune_syz.pl, tune_remez.pl: Bug fix. Do not take sqrt of eigenvalues. 2007-05-30 15:59 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Changed bounds on lowerMin & upperMax. 2007-05-29 01:55 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Removed correction for pads in u_s & u_t determination. 2007-05-29 00:51 edwards * main/sfpcac/run_tune/: compute_coeffs_syz.pl, generate_nf3_syz_largevol.pl: Fixed u_s_stout^3 factor in denom of c_s. 2007-05-27 23:15 edwards * main/sfpcac/run_tune/run_tune_syz.pl: Made initial beta_resc_fact an input param. 2007-05-27 22:59 edwards * main/sfpcac/run_tune/: generate_nf3_syz_largevol.pl, run_tune_syz.pl: New tuning strategies. 2007-05-27 18:31 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, generate_nf3_syz_largevol.pl: Added rescaling of beta. 2007-05-26 13:19 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Print the output to stdout. 2007-05-26 00:03 edwards * main/sfpcac/run_tune/: generate_nf3_syz.pl, run_launch_sp.pl, tune_param_nf3_syz.pl: New format for generating launch scripts. 2007-05-25 22:43 edwards * main/sfpcac/run_tune/generate_nf3_syz_largevol.pl: For large volumes (no SF bc). 2007-05-25 22:41 edwards * main/sfpcac/run_tune/: find_my_dir.pl, tune_param_nf3_syz.pl: Symanzik gaugeact. 2007-05-25 15:19 edwards * docs/jackknife.tex: Notes on jackknife. 2007-05-22 16:59 edwards * main/sfpcac/run_tune/find_my_dir.pl: Added node count. 2007-05-21 21:49 edwards * main/sfpcac/run_tune/find_my_dir.pl: Fixed line construction around PBS_O_WORKDIR. 2007-05-21 21:10 edwards * main/sfpcac/run_tune/tune_remez.pl: Bug fix. Check if latest file does NOT exist, in which case then exit. 2007-05-21 17:02 edwards * main/sfpcac/qpot_chisq.cc: Technically a bug fix. For the "line_fit" guy, the aniso \xi must be passed in a used for the "e_c=pi/12". 2007-05-20 13:08 edwards * main/sfpcac/run_tune/compute_coeffs_syz.pl: Added computing of coefficients for clover over Symanzik glue. 2007-05-19 00:21 edwards * main/sfpcac/filter_qpot_Q.csh: Added error check. 2007-05-19 00:08 edwards * main/sfpcac/filter_qpot.csh: A filtering script. 2007-05-19 00:08 edwards * main/sfpcac/: qpot.cc, qpot_chisq.cc, qpot_chisq.h: Added a proper "xi" to the determination of r_0. 2007-05-19 00:07 edwards * main/sfpcac/filter_qpot_Q.csh: Another filtering script. 2007-05-19 00:07 edwards * main/sfpcac/qpot.ini.xml: Input file. 2007-05-18 21:37 edwards * main/sfpcac/run_tune/queue_arch_type_maui.pl: Bug fix. 2007-05-18 09:32 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Added ib7n 2007-05-13 16:36 tag qio2-1-9 2007-05-13 16:36 detar * other_libs/c-lime/: aclocal.m4, configure, configure.ac, examples/lime_contents.c, examples/lime_extract_record.c, examples/lime_extract_type.c, examples/lime_pack.c, examples/lime_unpack.c, examples/lime_writer_test1.c, include/Makefile.am, include/dcap-overload.h, include/lime.h, include/lime_config_internal.h.in, lib/lime_fseeko.c, lib/lime_reader.c, lib/lime_writer.c: Add support for dcache/DCAP from Jim Simone 2007-05-10 22:44 edwards * main/sfpcac/qpot.cc: Added binning and dropping. 2007-05-10 16:42 kostas * main/utils/merge_cproplists.cc: added merge 2007-05-10 15:58 kostas * aclocal.m4, main/utils/Makefile.am, main/utils/average_cproplist.cc, main/utils/cfold.cc, main/utils/plot_prop.cc: added some utils 2007-05-09 22:16 kostas * include/covfit/fitters/exponper_subtr.h, include/covfit/fitters/fitfunctions.h, lib/covfit/function_switchboard.cc: added the fit function I need for periodic two meson spectroscopy 2007-04-30 13:19 tag adat1-31-0 2007-04-30 13:19 edwards * NEWS: Info on 1.31.0 2007-04-30 13:17 edwards * aclocal.m4, configure: Induced changes 2007-04-30 13:16 edwards * configure.ac: Changed to 1.31.0 2007-04-30 13:12 edwards * configure.ac: Changed to 1.32.0 2007-04-19 10:14 edwards * main/sfpcac/run_tune/tune_remez.pl: New tests. 2007-04-18 21:50 kostas * main/utils/jack_corrfunc_ratio.cc: fixed bug 2007-04-18 18:01 edwards * main/strippers/strip_hadspec.cc: Ooops, a fix. 2007-04-18 18:00 edwards * main/strippers/strip_hadspec.cc: Added the negpar nucleon/sigma. 2007-04-18 17:58 edwards * aclocal.m4: Induced changes. 2007-04-18 17:22 kostas * main/utils/: Makefile.am, jack_corrfunc_ratio.cc: added an other beauty 2007-04-16 17:49 kostas * main/spectrum/Makefile.am: more autoconf automake 2007-04-16 17:31 kostas * main/: fitters/Makefile.am, utils/merge_proplists.cc: fixed fitter automake 2007-04-16 17:24 kostas * include/covfit/statistics.h, main/spectrum/Makefile.am, main/spectrum/jack_spectrum.cc: added jack_spectrum 2007-04-15 00:22 kostas * main/spectrum/jack_spectrum.cc: jackknife lists from spectrum fits 2007-04-12 01:08 kostas * include/covfit/: adat_lapack.h, lapack_wrapper.h: work in progress 2007-04-12 00:46 tag qdp1-23-2 2007-04-12 00:46 kostas * include/covfit/adat_lapack.h, include/covfit/proplist.h, lib/covfit/proplist.cc, other_libs/xpath_reader/include/xml_array2d.h: work in progress 2007-04-11 14:01 kostas * include/covfit/proplist.h, lib/covfit/proplist.cc, other_libs/xpath_reader/include/xml_array.h, other_libs/xpath_reader/include/xml_array2d.h: improved the 2d arrays 2007-04-10 10:16 kostas * lib/covfit/proplist.cc, main/utils/merge_proplists.cc: mege_proplists now merges into complex numbers 2007-04-07 00:44 kostas * include/covfit/proplist.h, include/covfit/statistics.h, other_libs/xpath_reader/include/xml_array2d.h: further fixes of the 2d array and the statistics.h 2007-04-06 01:02 kostas * other_libs/xpath_reader/include/xml_array.h: removed redundant things.. 2007-04-06 01:00 kostas * include/covfit/statistics.h, other_libs/xpath_reader/include/xml_array.h, other_libs/xpath_reader/include/xml_array2d.h: fixed up the xml_array2d class 2007-04-02 22:13 kostas * include/covfit/proplist.h: fixed prototypes 2007-03-29 14:35 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Collapsed various scripts into continue_hmc.pl . 2007-03-29 14:25 edwards * main/sfpcac/run_tune/continue_hmc.pl: Holder for other scripts. 2007-03-28 17:07 edwards * main/sfpcac/run_tune/build_xml.csh: Added a space. 2007-03-26 14:44 dudek * lib/recipes/svdcmp.cc: upped max iterations from 30 to 100 2007-03-26 11:33 dudek * main/formfac/Makefile.am: added eigenvalue inverters 2007-03-26 11:33 dudek * main/formfac/complex_eigen_inverse.cc: complex eigenvalue inverter 2007-03-26 11:18 edwards * include/ensem/ensem_ensem.h: Fixes for checkResize. Need to include ensemble types. 2007-03-22 01:11 kostas * aclocal.m4, lib/covfit/proplist.cc, main/utils/Makefile.am, main/utils/merge_proplists.cc: added the merge_proplist utility 2007-03-22 00:45 kostas * include/covfit/proplist.h, lib/covfit/proplist.cc: added multicolumn reading for proplist files 2007-03-20 21:33 edwards * main/sfpcac/run_tune/run_launch_sp.pl: More cleanups. 2007-03-20 18:11 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Simplified the output script. Push explicit paths into variable names. 2007-03-20 18:09 edwards * main/sfpcac/run_tune/run_tune_sp.pl: Changed ev bounds. 2007-03-20 17:48 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Added a tune_remez.pl to the initial script. 2007-03-20 17:46 edwards * main/sfpcac/run_tune/tune_remez.pl: New program to update the remez eigenvalue bounds for a 1-flavor calculation. 2007-03-20 12:49 edwards * aclocal.m4: Induced changes 2007-03-20 12:41 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Hack to speed up running. Force h1 and gauge monomials onto the rat1_md time scale. 2007-03-20 12:01 edwards * main/sfpcac/run_tune/run_tune_sp.pl: Just some indending. 2007-03-20 00:41 edwards * include/ensem/ensem_ensem.h: Changed some float's to double's. 2007-03-20 00:41 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Changed/fixed the rescale factor used for bootstrapping all the data to the same ensemble size. This factor should come from the original data size. 2007-03-19 11:54 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Added ptavv. 2007-03-18 18:08 tag qdp1-23-1 2007-03-18 18:08 edwards * other_libs/c-lime/examples/lime_unpack.c: Removed what I think is a dcache closing of a file. 2007-03-17 08:55 detar * other_libs/c-lime/examples/lime_unpack.c: Correct premature use of DCAP macro 2007-03-16 20:14 detar * other_libs/c-lime/examples/lime_unpack.c: Fix print statement 2007-03-13 00:01 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.deviates.pretty.csh: Pretty-print the deviates. 2007-03-12 00:05 edwards * main/sfpcac/hypercubefit.cc: Set tolerance to zero. 2007-03-11 23:58 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.phys.xsl: Print contents of the physics line. 2007-03-08 00:57 kostas * include/: Makefile.am, covfit/fitters/exponper_altern_onemass.h: added new fit function 2007-03-08 00:54 kostas * include/covfit/fitters/exponper_altern.h: changed to be able to do arbitrary number of exponentials 2007-03-08 00:15 kostas * include/covfit/fitters/expon_altern.h, include/covfit/fitters/fitfunctions.h, lib/covfit/function_switchboard.cc, main/spectrum/spectrum.cc: fixed the problems alternating exps. had with spectrum 2007-03-07 14:22 kostas * include/covfit/jackknife.h, main/utils/eff_mass.cc: added step two effective mass good for staggered fermions 2007-03-07 13:24 kostas * include/covfit/jackknife.h, main/utils/eff_mass.cc: fixed up the effective mass utility to work with periodic BC 2007-03-07 01:11 kostas * main/utils/eff_mass.cc: [no log message] 2007-03-07 00:40 kostas * main/utils/eff_mass.cc: added the eff_mass 2007-03-07 00:39 kostas * include/covfit/jackknife.h: added the effective mass 2007-03-06 23:01 kostas * include/Makefile.am, include/covfit/jackknife.h, main/utils/Makefile.am: added jackknife utilities and a simple effective mass utility 2007-03-03 14:58 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added print of hypercube fit data. 2007-03-03 14:57 edwards * main/sfpcac/hypercubefit.cc: Changed how coords are printed in xml. 2007-03-03 14:41 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added missing origin assignment. 2007-03-03 14:32 edwards * main/sfpcac/: hypercubefit.cc, hypercubefit.h: Added a writer for the data. 2007-03-03 13:37 edwards * main/sfpcac/q_mass_dm.cc: Fixed a 2. 2007-03-03 13:33 edwards * main/sfpcac/q_mass_dm.cc: Changed a one to now also a two. 2007-03-03 13:30 edwards * main/sfpcac/q_mass_dm.cc: Changed from using zero to using one. 2007-03-03 13:28 edwards * main/sfpcac/q_mass_dm.cc: Fixes. 2007-03-03 13:25 edwards * main/sfpcac/q_mass_dm.cc: Hop hoops to avoid division on the edges. 2007-03-03 10:10 edwards * main/sfpcac/q_mass_dm.cc: Fixes. 2007-03-03 09:59 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Renamed origin. 2007-03-03 09:49 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added origin. 2007-03-03 09:48 edwards * main/sfpcac/sf_single_mass.cc: Changed quark_mass_fit3 to quark_mass_fit. 2007-03-03 09:48 edwards * main/sfpcac/q_mass_dm.cc: Changed quark_mass_fit3 to quark_mass_fit and now an array. 2007-03-03 09:48 edwards * main/sfpcac/q_mass.h: Removed quark_mass_fit3 2007-03-02 23:02 kostas * include/covfit/FitParams_io.h, include/covfit/fitters/fitfunctions.h, lib/covfit/FitParams_io.cc, lib/covfit/function_switchboard.cc, main/spectrum/spectrum.cc: fixed spectrum to accept periodic functions 2007-03-02 01:08 kostas * include/covfit/proplist.h, lib/covfit/CovarMat.cc, lib/covfit/proplist.cc: fixed up the covariance matrix and the proplists so that they can handle the complex numbers hadspec is producing... 2007-03-02 00:11 kostas * aclocal.m4, configure, configure.ac, main/fitters/Makefile.am: added periodic exponential fitter main prog 2007-03-01 22:53 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.pretty.csh: Added printing of the data-point number. 2007-03-01 16:29 edwards * main/sfpcac/: sf_cube_fit_mass_nu_xi.pretty.csh, sf_cube_fit_mass_nu_xi.print.xsl: Added printing of number of measurements. 2007-03-01 16:17 edwards * main/sfpcac/: sf_cube_fit_mass_nu_xi.pretty.csh, sf_cube_fit_mass_nu_xi.print.xsl: New code. 2007-03-01 15:47 edwards * main/sfpcac/run_tune/build_xml.csh: Added file checking. 2007-02-27 21:49 edwards * main/ttt/: qqq_props.cc, qqq_props.h: Reorganized the lime reading. Split off those functions to stand-alone functions. The qqq_props reader now goes through these functions. At least the sparse and dense reading are working, but it is not clear if the "prop_number" used for the sparse is correct or not. 2007-02-27 21:47 edwards * main/ttt/Makefile.am: Added dump_qqq. Made dependencies go through DEPENDENCIES. 2007-02-27 21:47 edwards * main/ttt/dump_qqq.cc: Dumps out a qqq file. 2007-02-27 21:46 edwards * main/ttt/arrays.h: Added copy constructors to both array1d and array2d. Added explicit keywords around constructors with an int. 2007-02-27 11:24 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Do not remove work directory. 2007-02-27 11:22 tag qdp1-22-0 2007-02-27 11:22 tag qdp1-22-1 2007-02-27 11:22 tag qdp1-23-0 2007-02-27 11:22 edwards * other_libs/xpath_reader/include/xml_array2d.h: Added nrows and ncols to Array2d. 2007-02-27 11:08 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Added missing ";" adter EOF. 2007-02-27 11:07 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Now rsh back to front end to resubmit job. 2007-02-27 10:52 edwards * main/sfpcac/sf_single_mass.cc: Added printing of number of jackknife bins 2007-02-26 17:38 edwards * main/formfac/eigen_inverse.cc: Added reading a particular time-slice. 2007-02-26 17:32 dudek * main/formfac/eigen_inverse.cc: fixed typos 2007-02-26 17:24 edwards * main/formfac/eigen_inverse.cc: Added missing includes and namespace stuff. 2007-02-26 17:15 edwards * main/formfac/eigen_inverse.cc: First version of the inverse of the output of ggev. 2007-02-26 16:50 edwards * main/sfpcac/matrix_solver.cc: An ensemble matrix solver. 2007-02-26 10:48 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Put in a flush. 2007-02-26 10:42 edwards * main/sfpcac/run_tune/find_my_dir.pl: Fixed how the WORKDIR line is constructed. 2007-02-26 09:55 edwards * main/sfpcac/run_tune/queue_arch_type_maui.csh: Added pion and kaon cases. 2007-02-26 09:52 edwards * main/sfpcac/run_tune/queue_arch_type_maui.csh: Added pion and kaon. 2007-02-26 09:51 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Now format the directory names. 2007-02-25 21:33 edwards * main/sfpcac/run_tune/ending.xml: Keep this around. 2007-02-25 00:25 edwards * main/sfpcac/run_tune/queue_arch_type_maui.pl: Bug fix. 2007-02-25 00:17 edwards * main/sfpcac/run_tune/queue_arch_type_maui.pl: Added fnal versions. 2007-02-24 22:26 edwards * main/sfpcac/run_tune/build_xml.csh: Added sanity checks on the files. 2007-02-24 21:17 edwards * main/sfpcac/run_tune/tune_param_nf3_sp.pl: New Nf=3 2007-02-24 16:46 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Fix. 2007-02-24 16:40 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Made clover funcs. 2007-02-24 16:32 edwards * main/sfpcac/run_tune/queue_arch_type_maui.sh: Added yodjag 2007-02-24 16:28 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Changed nodes and walltime. 2007-02-24 15:49 edwards * main/sfpcac/run_tune/queue_arch_type_maui.csh: Fixes. 2007-02-24 15:46 edwards * main/sfpcac/run_tune/run_hmc.pl: Pull out more paths. 2007-02-24 15:38 edwards * main/sfpcac/run_tune/run_hmc.pl: Fixes paths. 2007-02-24 15:21 edwards * main/sfpcac/run_tune/queue_arch_type_maui.pl: Another machine name. 2007-02-24 15:19 edwards * main/sfpcac/run_tune/run_hmc.pl: Made paths relative. 2007-02-24 15:06 edwards * main/sfpcac/run_tune/run_tune_sp.pl: Removed absolute path. 2007-02-24 14:47 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Fixes. 2007-02-24 14:40 edwards * main/sfpcac/run_tune/: queue_arch_type_maui.csh, queue_arch_type_maui.pl, queue_arch_type_maui.sh: Added xt3 2007-02-21 22:30 edwards * include/ensem/ensem_ensem.h: Changed forward decl of rescaleFactor to double. 2007-02-21 22:29 edwards * include/ensem/ensem_ensem.h: Changed return type of rescaleFactor to double. Made sure sqrt() is on a double. 2007-02-20 20:45 edwards * main/sfpcac/rebalance.cc: Made the try/catch region encompass most of the executable portion of the main program. 2007-02-13 16:18 adamant * main/ttt/ttt_single.cc: Changed a cout to a cerr 2007-02-13 16:17 adamant * main/ttt/ttt.cc: Cleaned up some namespace stuff, and changed a cout to a cerr 2007-02-13 00:20 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Switched to quark_mass_fit3. 2007-02-13 00:20 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.deviates.xsl: Added time error bars 2007-02-12 23:28 edwards * main/sfpcac/: Makefile.am, constfit.cc, constfit.h, q_mass.h, q_mass_dm.cc, sf_single_mass.cc: Added constfit. Made sf_single_mass use it. 2007-02-12 20:32 tag qdp_pre_subset_cleanup 2007-02-12 20:32 tag qio2-1-8 2007-02-12 20:32 osborn * other_libs/c-lime/examples/lime_writer_test1.c: fixed --enable-dml-bufsize option and more warning eliminations 2007-02-12 19:49 osborn * other_libs/c-lime/: configure, examples/lime_contents.c, examples/lime_extract_type.c, examples/lime_pack.c, examples/lime_unpack.c, include/lime_config_internal.h.in: Eliminated compiler warnings and now save configure options in qio-config. 2007-02-12 14:46 edwards * include/ensem/ensem_ensem.h: Bug fix - added missing getEnsemType() to various checkResize-s. 2007-02-12 02:38 edwards * main/sfpcac/sf_single_mass.cc: Added missing read of "DataParams" struct. 2007-02-12 02:07 edwards * main/sfpcac/run_tune/build_xml.csh: Added some diagnostic output. 2007-02-12 02:07 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.deviates.xsl: Added printing of error bars. 2007-02-12 02:06 edwards * main/sfpcac/sf.cube_fit.ini.xml: Added ndrop. 2007-02-12 02:04 edwards * main/sfpcac/sf.ini.xml: Added DataParams 2007-02-12 02:03 edwards * main/sfpcac/sf_single_mass.cc: Added binning and dropping. 2007-02-12 01:51 edwards * main/sfpcac/run_tune/: build_xml.csh, concat_inline_xml.csh: Concatenation files. 2007-02-12 01:39 edwards * main/sfpcac/accprob.xsl: Extract AccProb. 2007-02-11 18:30 edwards * main/sfpcac/run_tune/clean_previous_lime.pl: Fix. 2007-02-11 18:29 edwards * main/sfpcac/run_tune/clean_previous_lime.pl: Cleans out old files. 2007-02-11 17:48 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Added cleaning of previous lime files. 2007-02-11 17:03 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Split output files to be for each run. 2007-02-11 00:28 edwards * main/: sfpcac/sf_cube_fit_mass_nu_xi.cc, sfpcac/sf_reader.cc, sfpcac/sf_reader.h, sfpcac/wilslp_reader.cc, sfpcac/wilslp_reader.h, ttt/qqq_props.cc, ttt/qqq_props.h: Added "ndrop" - the dropping of measurements from the beginning of an ensemble. 2007-02-11 00:28 edwards * include/ensem/ensem_ensem.h: Added dropping from the beginning of an ensemble. 2007-02-06 01:45 edwards * main/sfpcac/run_tune/: run_launch_sp.pl, run_tune_sp.pl: Further fixes to support resubmission. 2007-02-06 01:05 edwards * main/sfpcac/run_tune/: run_hmc.pl, run_launch_sp.pl, run_tune_sp.pl: Added new capability to extend runs. 2007-02-02 11:34 edwards * configure.ac: Changed to 1.31 2007-02-01 22:50 edwards * lib/recipes/mnewt.cc: Newton-Raphson solver. 2007-02-01 00:01 adamant * main/ttt/ttt_single.cc: Turned off output headers 2007-01-31 12:28 adamant * main/ttt/ttt_single.cc: ttt_single: a stripped down version of ttt which operates on a single configuration- suitable for cluster runs 2007-01-31 12:27 adamant * main/ttt/Makefile.am: Added ttt_single program to process single configurations. 2007-01-28 23:05 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Increased chronos of constdet piece. 2007-01-28 22:37 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Changed to using a new MD rat monomial with variable RsdCG. Now need a copyList in the Integrator. 2007-01-28 17:02 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Changed Uncorrelated_fit group name to IntersectionFit. 2007-01-24 12:30 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Fixes. 2007-01-24 01:16 edwards * main/sfpcac/: hypercubefit.cc, hypercubefit.h, sf_cube_fit_mass_nu_xi.cc: Reworked data structures to accomodate possible nonlinear (in coords) fits. 2007-01-23 22:38 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Added a -N flag to the pbs script. 2007-01-23 21:06 edwards * main/sfpcac/Makefile.am: Promoted rebalance. 2007-01-23 19:39 edwards * main/sfpcac/run_tune/run_tune_sp.pl: Bug fix in setting u_s_stout and u_t_stout. 2007-01-23 18:53 adamant * main/ttt/ttt.cc: Reports execution time in seconds of each step. 2007-01-23 18:18 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Switch to 2+1. Try hasenbusch instead of rats. 2007-01-23 18:07 edwards * main/sfpcac/run_tune/tune_param_nf2_sp.pl: Changed mass_h1_dm stuff. 2007-01-23 17:45 adamant * main/ttt/ttt.cc: Fixed timestamp code 2007-01-23 15:27 edwards * main/sfpcac/run_tune/: generate_nf2_sp.pl, generate_nf3_sp.pl, run_tune_sp.pl: Fixes. 2007-01-23 15:08 edwards * main/sfpcac/run_tune/: generate_nf2_sp.pl, generate_nf2_wl.pl, generate_nf3_sp.pl, run_tune_sp.pl, s_plaq.xsl, s_plaq_stout.xsl, t_plaq.xsl, t_plaq_stout.xsl, tune_param_nf2_sp.pl: Fixes to support new monomial structure and stouting. 2007-01-23 00:44 edwards * main/sfpcac/run_tune/run_tune_sp.pl: New way of reading rebalance output. 2007-01-22 16:18 adamant * main/ttt/ttt.cc: Fixed a bug: config counter 'i' was not incrementing, and added datestamp information 2007-01-20 17:56 edwards * main/sfpcac/run_tune/: generate_nf3_sp.pl, run_tune_sp.pl, test_print.pl, test_print2.pl: New integrator support. 2007-01-20 17:56 edwards * main/sfpcac/run_tune/print_hmc_param.pl: New print support. 2007-01-20 17:54 edwards * main/sfpcac/rebalance.cc: Updated to handle many sub-monomials. 2007-01-18 00:27 edwards * main/sfpcac/sf.cube_fit.ini.xml: Added new orders. 2007-01-18 00:25 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added all nonlinear fitting. 2007-01-17 22:17 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Switched to using only 4th order integrators over only 1-flavor monomials. 2007-01-17 21:48 edwards * main/sfpcac/run_tune/generate_nf3_sp.pl: Updated to new monomial form. 2007-01-17 16:41 adamant * main/ttt/qqq_props.cc: Assumes that qqq props are in directories labeled by configuration number 2007-01-16 16:21 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.math.xsl: Print lots of stuff. 2007-01-16 15:56 edwards * main/sfpcac/run_tune/run_hmc.pl: Changed when the log file is compressed. 2007-01-15 22:10 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.deviates.xsl: More changes. 2007-01-15 21:29 edwards * main/sfpcac/: sf.cube_fit.ini.xml, sf_cube_fit_mass_nu_xi.space_dev.xsl: New version. 2007-01-15 21:28 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.deviates.xsl: New deviates. 2007-01-15 21:20 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.space_dev.xsl: Print space deviates. 2007-01-14 09:47 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Moved around where the "deviates" are printed. 2007-01-13 18:54 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added a debugging output. 2007-01-13 18:46 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Bug fix. 2007-01-13 18:10 edwards * main/sfpcac/sf.cube_fit.ini.xml: New input file. 2007-01-13 18:09 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: BIG change. Added a whole new nonlinear fitter system. Now have an option on what to call - the order of the mass. 2007-01-13 14:14 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Small change - renamed a subroutine. 2007-01-13 13:40 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: More reorganizations and isolating relevant pieces of codes. 2007-01-13 10:43 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Pushed schrFun parameters off to their own struct. 2007-01-13 10:28 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Pushed some of the fit stuff to a new namespace. 2007-01-13 10:18 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Trivial code reorgs. 2007-01-13 10:15 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Further code cleanups. 2007-01-13 09:19 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added printing of boot stats. 2007-01-12 11:27 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Reorganized data structures. Starting to abstract out some common bits (e.g., the linear system solver for the bare params). 2007-01-12 10:02 edwards * main/sfpcac/: hypercubefit.cc, hypercubefit.h: Changed name of cubefit to hypercubefit 2007-01-11 14:05 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Now plot physics line from M=0. 2007-01-11 13:12 edwards * main/sfpcac/sf_reader.cc: Try the trick for speeding up the reader. This is problematic for very large xml files, but these now seem to be moderate. 2007-01-11 13:08 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Bug fix - had a wrong rescaled data array. 2007-01-11 00:52 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added missing read of data_params. Added some more diagnostics. 2007-01-11 00:45 edwards * main/sfpcac/sf_reader.cc: Bug fix. Added missing reads of clovCoeffR and clovCoeffT. 2007-01-11 00:07 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added bootstrapping. 2007-01-11 00:07 edwards * main/sfpcac/: sf_reader.cc, sf_reader.h, wilslp_reader.cc, wilslp_reader.h: Added a "bin" member function. 2007-01-11 00:06 edwards * include/ensem/ensem_ensem.h: Added a binEnsem() and another rescaleFactor() 2007-01-11 00:01 edwards * main/sfpcac/sf.cube_fit.ini.xml: Cube fit program. 2007-01-09 23:56 edwards * include/ensem/ensem_ensem.h, include/ensem/ensem_scalar_specific.h, lib/formfac/ff_lsq.cc, main/sfpcac/qpot_chisq.cc, main/sfpcac/sf_plane_fit_mass_xi.cc, main/sfpcac/xi_chisq.cc: Changed Ensem class to now have a EnsemType_t (jackknife or bootstrap). Now the rescaleFactor() is a member function. 2007-01-09 23:55 tag adat1-30-0 2007-01-09 23:55 edwards * NEWS: Info on 1.30.0 2007-01-09 23:52 edwards * configure: Induced changes 2007-01-09 23:51 edwards * configure.ac: Changed to 1.30 2007-01-09 23:51 edwards * NEWS: Info on 1.30.0 2007-01-09 20:49 edwards * aclocal.m4: Induced changes. 2007-01-09 20:48 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Rearranged where a xml_out happens. 2007-01-09 17:10 edwards * main/sfpcac/: hypercubefit.cc, hypercubefit.h, linefit.cc, linefit.h, planefit.cc, planefit.h, sf_line_fit_csw.cc, sf_plane_fit_mass_csw.cc, sf_uncorr_mass_list_analyze.cc: Changed chi_sq to chisq 2007-01-09 17:09 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Improved output. 2007-01-09 16:46 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Small improvement in xml output. 2007-01-09 16:37 edwards * main/sfpcac/sf_cube_fit_mass_nu_xi.cc: Added reading of separate time and space mass params. 2007-01-09 16:37 edwards * main/sfpcac/Makefile.am: Fix name of sf_cube_fit*.cc file. 2007-01-06 23:59 edwards * main/sfpcac/rebalance.cc: Added more digits to printing. 2007-01-06 23:47 edwards * main/sfpcac/run_tune/: generate_nf2_sp.pl, run_tune_sp.pl: Added tuning of step sizes. New structures hold monomial list and step sizes. 2007-01-06 23:46 edwards * main/sfpcac/run_tune/tune_param_nf2_sp.pl: Added force_dt2. 2007-01-06 23:45 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Basedir is now determined from the path location of this script. 2007-01-06 23:44 edwards * main/sfpcac/run_tune/print_hmc_param.pl: Fixed printing of hashes. 2007-01-06 23:21 edwards * main/sfpcac/rebalance.cc: Added printing of forces. 2007-01-05 22:35 edwards * main/sfpcac/run_tune/: generate_nf2_sp.pl, tune_param_nf2_sp.pl: Added new support for integrator. 2007-01-05 22:34 edwards * main/sfpcac/run_tune/run_launch_sp.pl: Error check of input file. 2007-01-05 22:34 edwards * main/sfpcac/run_tune/run_tune_sp.pl: Small change. 2007-01-05 21:47 edwards * main/sfpcac/run_tune/tune_param_nf2_sp.pl: A sample tune input script. 2007-01-05 21:45 edwards * main/sfpcac/run_tune/: run_launch_sp.pl, run_tune_sp.pl: Updated for new location. Added more testing to run_tune_sp.pl 2007-01-05 21:38 edwards * main/sfpcac/run_tune/: find_my_dir.pl, generate_nf2_sp.pl, generate_nf2_wl.pl, generate_nf3_sp.pl, lower_min.xsl, print_hmc_param.pl, queue_arch_type_maui.pl, run_hmc.pl, run_launch_sp.pl, run_tune_sp.pl, s_plaq.xsl, t_plaq.xsl, upper_max.xsl: Run-tune scripts. 2007-01-05 17:14 edwards * main/sfpcac/rebalance.cc: Working version. 2007-01-05 13:50 edwards * main/sfpcac/Makefile.am: Added rebalance 2007-01-05 10:33 edwards * main/sfpcac/rebalance.cc: New script for rebalancing MD forces. 2006-12-26 23:34 kostas * aclocal.m4, include/Makefile.am: install new function 2006-12-26 23:23 kostas * include/covfit/fitters/exponper_altern.h, include/covfit/fitters/fitfunctions.h, lib/covfit/function_switchboard.cc: Added periodic alternating exponential fit function 2006-12-21 15:31 edwards * main/sfpcac/: Makefile.am, cubefit.cc, cubefit.h, hypercubefit.cc, hypercubefit.h, sf_cube_fit_mass_nu_xi.cc: Added a new hypercube fitter. Switched sf_cube_fit to use the hypercube fitting code. 2006-12-21 09:46 tag adat1-29-0 2006-12-21 09:46 edwards * NEWS: Info on 1.29.0 2006-12-21 09:44 edwards * aclocal.m4, configure: Induced changes 2006-12-21 09:44 edwards * configure.ac: Changed to 1.29. 2006-12-21 09:43 edwards * aclocal.m4: Induced changes. 2006-12-21 09:42 edwards * main/strippers/strip_npr_vertex.cc: First (non-working) version. 2006-12-21 09:42 edwards * main/strippers/Makefile.am: Added strip_npr_vertex 2006-12-21 09:41 edwards * main/strippers/strip_hadspec.cc: Added alternate reader of PropSink xml group. 2006-12-21 09:40 edwards * lib/formfac/ff_manage.cc: Added param BB reader. 2006-12-21 09:39 edwards * include/io/adat_xml_group_reader.h, include/Makefile.am, lib/io/adat_xml_group_reader.cc, lib/Makefile.am: Added group reader. 2006-12-21 09:39 edwards * include/adat/objfactory.h: Added an "exist" function. 2006-12-21 09:38 edwards * include/formfac/formfac_manage_factory.h: New factory. 2006-12-21 09:38 edwards * include/formfac/formfac_manage.h: Added factory stuff. 2006-12-21 00:51 edwards * main/sfpcac/: Makefile.am, cubefit.cc, cubefit.h, sf_cube_fit_mass_nu_xi.cc: Added a cube fitter version to determine mass_cr, xi and nu. 2006-12-20 23:08 edwards * main/formfac/: Makefile.am, baryon_matrix_elems.h, matrix_elems.cc, matrix_elems.h, matrix_elems_factory.h, meson_fit.cc, meson_matrix_elems.cc, meson_matrix_elems.h: First start of matrix element factory. 2006-12-20 13:13 edwards * main/formfac/wavefuncs.h: Added decl of make4vec. 2006-12-20 13:13 edwards * main/formfac/wavefuncs.cc: Did some indenting. 2006-12-14 21:44 edwards * main/formfac/: file_test.cc, operators.cc, operators.h, wavefuncs.cc, wavefuncs.h: Jo Dudek's changes. Now the wavefunctions are classes and changes to operators to support that. 2006-12-08 01:48 kostas * lib/covfit/FitParams_io.cc: fixed bug in write state 2006-12-08 00:23 kostas * include/covfit/FitParams_io.h, lib/covfit/FitParams_io.cc, main/spectrum/param_db.xml, main/spectrum/spectrum.cc: modified spectrum to admit arbitrary function 2006-12-07 10:48 kostas * lib/covfit/function_switchboard.cc: fixed bug.. 2006-12-06 09:06 dudek * main/formfac/rho_pion_fit_cons_exc.cc: rho-pion transition, conserved current, excited states 2006-12-06 09:05 dudek * main/formfac/pion_pion_fit_cons_exc.cc: pion form factor by fit method, conserved current and excited states 2006-12-06 09:04 dudek * main/formfac/pion_pion_fit_cons.cc: pion form factor by the fit method, implemented the conserved wilson current 2006-12-05 23:17 kostas * include/covfit/fitters/chiPTgA.h, include/covfit/fitters/fitfunctions.h, lib/Makefile.am, lib/covfit/function_switchboard.cc: added function "factory" ... Robert sorry for the abuse of terminology... 2006-12-04 16:44 edwards * main/ttt/ttt.cc: Changed to using a configuration list system instead of fixed configuration numbers. 2006-12-03 17:52 edwards * main/strippers/strip_mesonspec.cc: Added an alternate reading of propsink and propsinksmear. 2006-11-29 11:59 hwlin * main/formfac/nucleon_ff.cc: fermI: E+i P\dot \gamma -> E-i P\dot \gamma rhs: calculate u-d and u+d component of vector current mat: change the summation of the \sigma_\mu\nu matrices 2006-11-28 16:39 dgr * main/ttt/: qqq_props.cc, ttt.cc: One bug fix in ttt: now correctly skips over missing configurations Two functional changes: assumes that files are stored in subdirectories labelled by configuration number, and assumes files have extension lime 2006-11-26 22:06 juge * main/stoch/: read_operdat.cc, read_operdat.h, stoch_baryon.cc, stoch_baryon2.cc, stoch_meson.cc: stoch_baryon2 makes the correlator from two separate operator files. Only does one config at a time. 2006-11-22 23:19 kostas * aclocal.m4, include/Makefile.am: [no log message] 2006-11-21 21:45 edwards * main/formfac/nucleon_ff.cc: Changed FF's from proton and neutron to u and d quark contributions. 2006-11-21 19:04 hwlin * main/formfac/nucleon_ff.cc: [no log message] 2006-11-21 15:23 edwards * main/formfac/ff_driver.cc: Changed to now also support complex. 2006-11-21 15:22 edwards * main/formfac/nucleon_ff.cc: Also now support complex. 2006-11-16 12:59 dgr * main/ttt/: corr_info.cc, qqq_props.cc: Now read lattice sizes from private record 2006-11-15 10:47 tag adat1-28-0 2006-11-15 10:47 edwards * configure: Induced changes 2006-11-15 10:47 edwards * main/sfpcac/: sf_plane_fit_mass_xi.axis1.xsl, sf_plane_fit_mass_xi.cc, sf_plane_fit_mass_xi.grace2.xsl: Added more data points. 2006-11-15 10:46 edwards * main/formfac/test_manage.cc: Added eraseUnused() function call 2006-11-15 10:44 edwards * aclocal.m4: Induced changes 2006-11-15 10:44 edwards * configure.ac: Changed to 1.28 2006-11-15 10:44 edwards * NEWS: Info on 1.28.0 2006-11-15 10:28 edwards * lib/formfac/ff_manage.cc: Fixes to make the debugging compile. 2006-11-15 10:26 edwards * lib/formfac/ff_manage.cc: Added some more debugging output. 2006-11-15 10:23 edwards * lib/formfac/ff_manage.cc: An apparent fix is need for the eraseUnused function. Erasing the map while iterating causes grief, so instead build up a list of things to erase and then do the erasing. 2006-11-15 10:08 edwards * main/formfac/nucleon_ff.cc: Added a call to threept.eraseUnused() in the setQsq function. 2006-11-15 10:05 edwards * include/formfac/formfac_manage.h, lib/formfac/ff_manage.cc: Added eraseUnused and rearranged some of the protected functions. 2006-11-14 16:13 edwards * main/formfac/: nucleon_ff.cc, nucleon_ff.ini.xml: Added max_map_size to 3pt-func-BB constructor and params. 2006-11-14 16:05 edwards * include/formfac/formfac_manage.h, lib/formfac/ff_bb.cc, lib/formfac/ff_manage.cc, lib/formfac/ff_mom_list.cc, main/formfac/test_manage.cc: Fixed up support for cache management along with deletion. 2006-11-14 16:04 edwards * include/io/adat_xmlio.h, lib/io/adat_xmlio.cc: Allow zero-length arrays. 2006-11-14 14:14 edwards * include/formfac/formfac_manage.h, lib/formfac/ff_manage.cc: Added new support for erasing 3pts and keeping better track of 3pts 2006-11-12 15:54 edwards * include/formfac/formfac_manage.h: Removed left over "state" from manage3ptbase. 2006-11-12 15:53 edwards * include/formfac/formfac_manage.h: Removed left over cfg_list from manage3ptbase. 2006-11-01 22:45 edwards * include/formfac/formfac_manage.h, lib/formfac/ff_manage.cc: Added stripped and DB manage3pt derived classes. 2006-11-01 21:52 edwards * include/formfac/formfac_manage.h, lib/formfac/ff_manage.cc, main/formfac/a0_2photon.cc, main/formfac/a0_ff.cc, main/formfac/a0_ff_fold.cc, main/formfac/a0_photon_fit.cc, main/formfac/a0_photon_fit_cons.cc, main/formfac/a0_rho_fit.cc, main/formfac/a0_rho_fit_fold.cc, main/formfac/b1_pion_fit.cc, main/formfac/b1_pion_fit_fold.cc, main/formfac/nucleon_ff.cc, main/formfac/pion_2photon.cc, main/formfac/pion_b1_fit.cc, main/formfac/pion_b1_fit_fold.cc, main/formfac/pion_ff.cc, main/formfac/pion_ff_fold.cc, main/formfac/pion_fit.cc, main/formfac/pion_photon_fit.cc, main/formfac/pion_pion_fit.cc, main/formfac/pion_rho_fit.cc, main/formfac/pion_rho_fit_fold.cc, main/formfac/pion_rho_fit_fold_exc.cc, main/formfac/rho_a0_fit.cc, main/formfac/rho_a0_fit_fold.cc, main/formfac/rho_a1_fit.cc, main/formfac/rho_a1_fit_fold.cc, main/formfac/rho_fit.cc, main/formfac/rho_fit_fold.cc, main/formfac/rho_pion_fit.cc, main/formfac/rho_pion_fit_fold.cc, main/formfac/rho_pion_fit_fold_exc.cc, main/formfac/test_manage.cc: Split Manage3PtFunc into a base class and a building-block specific derived class. Moved all codes to use the new Manage3PtFuncBB derived class. 2006-11-01 17:12 tag adat1-27-0 2006-11-01 17:12 edwards * aclocal.m4, configure: Induced changes 2006-11-01 17:12 edwards * NEWS: Info on 1.27.0 2006-11-01 17:11 edwards * configure.ac: Lots of new support in sfpcac. 2006-10-20 14:57 edwards * include/formfac/formfac_manage.h, lib/formfac/ff_manage.cc: Added src_name and snk_name to ThreePtArg. However, do not actually use it or sort on it. 2006-10-18 17:48 tag qdp1-21-4 2006-10-18 17:48 tag qdp1-21-5 2006-10-18 17:48 tag qdp1-21-6 2006-10-18 17:48 tag qdp1-21-7 2006-10-18 17:48 tag qdp1-21-8 2006-10-18 17:48 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes 2006-10-18 17:37 edwards * other_libs/xpath_reader/include/Makefile.am: Added xml_array2d.h 2006-10-12 00:10 edwards * main/sfpcac/sf_plane_fit_mass_xi.cc: Added plot of constant physics line. 2006-10-09 00:33 edwards * main/sfpcac/sf_plane_fit_mass_xi.grace2.xsl: Fixes. 2006-10-09 00:21 edwards * main/sfpcac/sf_plane_fit_mass_xi.grace1.xsl: Added renorm_xi 2006-10-09 00:18 edwards * main/sfpcac/sf_plane_fit_mass_xi.grace2.xsl: Fixes. 2006-10-09 00:16 edwards * main/sfpcac/sf_plane_fit_mass_xi.cc: Added printout of desired renorm xi. 2006-10-08 23:54 edwards * main/sfpcac/: sf_plane_fit_mass_xi.grace1.xsl, sf_plane_fit_mass_xi.grace2.xsl: Updates 2006-10-08 23:19 edwards * main/sfpcac/sf_plane_fit_mass_xi.cc: Fixes. 2006-10-08 15:01 edwards * main/sfpcac/: Makefile.am, qpot.cc, wilslp_ratio.cc: Split off the qpot_chisq to a new qpot.cc main program. 2006-10-08 14:06 edwards * main/sfpcac/: qpot_chisq.cc, sf_plane_fit_mass_xi.grace2.xsl, wilslp_ratio.cc: Changed ieeefp.h to math.h 2006-10-08 14:03 edwards * main/sfpcac/qpot_chisq.cc: Added more potential measurements. 2006-10-05 10:04 kostas * main/utils/: Makefile.am, block_proplist.cc: added blocking utility program 2006-09-29 18:21 edwards * main/sfpcac/qpot_chisq.cc: Did some reorg. 2006-09-29 17:04 edwards * main/sfpcac/qpot_chisq.cc: Hacked in a linear fit. 2006-09-29 12:51 edwards * main/sfpcac/: Makefile.am, qpot_chisq.cc, qpot_chisq.h, wilslp_ratio.cc: Split off qpot into its own file. 2006-09-29 01:16 edwards * main/sfpcac/: Makefile.am, wilslp_ratio.cc: Added potential determination. 2006-09-29 01:16 edwards * main/sfpcac/: sf_plane_fit_mass_xi.axis1.xsl, sf_plane_fit_mass_xi.axis2.xsl: First versions. 2006-09-29 01:16 edwards * main/sfpcac/: linefit.cc, linefit.h, planefit.cc, planefit.h: Split off write function. Made chisqq private. 2006-09-21 14:13 kostas * main/strippers/strip_spectrumQll.cc: now works for output version 2 2006-09-21 13:52 kostas * main/strippers/: Makefile.am, strip_spectrumQll.cc: Added spectrumQll stripper. Needs modification to support output version 2 2006-09-17 21:13 edwards * main/sfpcac/: sf_plane_fit_mass_xi.cc, sf_plane_fit_mass_xi.grace1.xsl, sf_plane_fit_mass_xi.grace2.xsl: New fit program. 2006-09-17 21:13 edwards * main/sfpcac/Makefile.am: Added sf_plane_mass_xi 2006-09-17 21:12 edwards * main/sfpcac/sf_reader.h: Added nu and xi. 2006-09-17 21:11 edwards * main/sfpcac/sf_reader.cc: Fixed some nasty bug causing a segfault in basicxpathreader::close. Basically, just rearranged close. 2006-09-17 21:10 edwards * main/sfpcac/wilslp_ratio.cc: Added xml writing. 2006-09-17 21:08 edwards * main/sfpcac/wilslp_reader.h: Removed clovCoeff. 2006-09-17 21:07 edwards * main/sfpcac/: xi_chisq.cc, xi_chisq.h, q_mass.h, q_mass_dm.cc: Added writer. 2006-09-15 15:28 edwards * main/sfpcac/: wilslp.ini.xml, wilslp_Vt.axis.xsl: Little changes. 2006-09-14 11:41 edwards * main/sfpcac/wilslp_Vt.axis.xsl: Fixed. 2006-09-14 11:39 edwards * main/sfpcac/wilslp_ratio.cc: Fixes. 2006-09-14 11:27 edwards * main/sfpcac/wilslp_Vt.axis.xsl: First crack at plotting potential. 2006-09-14 11:21 edwards * main/sfpcac/wilslp_ratio.cc: Now can construct and produce time off-axis potential. 2006-09-13 00:25 edwards * main/sfpcac/: wilslp_ratio.cc, wilslp_reader.cc, wilslp_reader.h: Added reading of wils_loop3 2006-09-13 00:25 edwards * include/ensem/ensem_ensem.h: Added some more diagnostics in error case in Ensem::resize(n). 2006-09-12 14:37 edwards * main/sfpcac/wilslp.ini.xml: Updated. 2006-09-12 12:05 edwards * main/sfpcac/: wilslp.ini.xml, wilslp_ratio.cc, xi_chisq.cc, xi_chisq.h: More fixes to use ratios. Now pass in some params. 2006-09-12 09:41 edwards * main/sfpcac/: wilslp_ratio.cc, xi_chisq.cc, xi_chisq.h: Changed to work on ratios! 2006-09-11 23:09 edwards * main/sfpcac/: wilslp_ratio.cc, xi_chisq.cc, xi_chisq.h: Fixed chisq functionality. Added min_xy. 2006-09-10 18:13 edwards * include/ensem/ensem.h: Added include of Array2d. 2006-09-10 18:13 edwards * aclocal.m4: Induced changes. 2006-09-10 18:10 tag qdp1-21-0 2006-09-10 18:10 tag qdp1-21-1 2006-09-10 18:10 tag qdp1-21-2 2006-09-10 18:10 tag qdp1-21-3 2006-09-10 18:10 edwards * other_libs/xpath_reader/include/xml_array2d.h: 2d array class. 2006-09-10 17:48 edwards * main/sfpcac/: Makefile.am, wilslp_ratio.cc, wilslp_reader.cc, wilslp_reader.h, xi_chisq.cc, xi_chisq.h: Added renormalized anisotropy chisq fitter. 2006-09-10 17:47 edwards * lib/: Makefile.am, recipes/brent.cc, recipes/spline.cc, recipes/splint.cc: More Numerical Recipes routines. 2006-09-08 12:46 edwards * main/sfpcac/sf_reader.cc: Only make tests of clovCoeff 2006-09-08 12:45 edwards * main/sfpcac/q_mass_dm.cc: Zero out more pads. 2006-09-06 10:41 edwards * main/formfac/pion_light_ff.ini.xml: Test file 2006-08-23 00:15 edwards * main/sfpcac/wilslp_ratio.cc: Changed/fixed ratios to be 1 based at least as far as matching distances. 2006-08-02 20:01 kostas * include/covfit/fitters/expon_altern.h: fixed bugs 2006-08-02 17:47 kostas * aclocal.m4, include/covfit/fitters/expon_altern.h, include/covfit/fitters/fitfunctions.h, main/fitters/Makefile.am: added alternating exponential fits 2006-07-20 13:19 edwards * main/strippers/strip_mesonspec.cc: Updated to use output version 3. 2006-07-17 17:31 edwards * main/sfpcac/q_mass_dm.cc: Put in a hacky cleanup of edges. 2006-07-17 15:48 tag adat1-26-0 2006-07-17 15:48 edwards * aclocal.m4, configure: Induced changes 2006-07-17 15:47 edwards * NEWS: Info on 1.26 2006-07-17 15:46 edwards * configure.ac: Changed to 1.26 2006-07-17 15:46 edwards * main/strippers/strip_hadspec.cc: Changed file names on baryons to be conditional on masses. If degenerate, names like "proton", and if not degenerate then names like "sigma" are used. 2006-07-17 00:53 edwards * main/sfpcac/wilslp.ini.xml: Added wilslp.ini file. 2006-07-16 23:21 tag qdp1-20-9 2006-07-16 23:21 edwards * other_libs/xpath_reader/lib/xml_simplewriter.cc: Changed precision of float to 7 digits and double to 15 digits. 2006-07-16 15:20 edwards * other_libs/xpath_reader/lib/xml_simplewriter.cc: Changed precision format of single. 2006-07-16 15:18 edwards * other_libs/xpath_reader/lib/xml_simplewriter.cc: Changed precision format of single and doubles. 2006-07-14 17:04 kostas * main/spectrum/spectrum.cc: fixed up the main program spectrum 2006-07-11 20:20 kostas * aclocal.m4, include/Makefile.am, include/covfit/fitters/chiPTgA.h, include/covfit/fitters/fitfunctions.h, include/covfit/fitters/gAJfunc.h, include/covfit/fitters/gAKfunc.h: added some things about gA fits. 2006-07-11 11:13 tag adat1-25-0 2006-07-11 11:13 edwards * NEWS: Info on 1.25 2006-07-11 11:11 edwards * aclocal.m4, configure: Induced changes 2006-07-11 11:11 edwards * configure.ac: Changed to 1.25 2006-07-11 11:10 edwards * main/strippers/strip_hadspec.cc: Now functions correctly. 2006-07-11 11:10 edwards * main/strippers/strip_mesonspec.cc: Bug fix. 2006-07-11 11:09 edwards * main/strippers/Makefile.am: Added strip_hadspec 2006-07-11 11:09 edwards * main/sfpcac/wilslp_ratio.cc: Some changes. 2006-07-07 15:10 edwards * main/formfac/: Makefile.am, test_manage.cc: Added test_manage.cc 2006-07-06 13:10 edwards * main/sfpcac/: wilslp_ratio.cc, wilslp_reader.cc, wilslp_reader.h: Switched to using wils_loop1 and wils_loop2 2006-07-05 18:23 edwards * main/sfpcac/: wilslp_ratio.cc, wilslp_reader.cc, wilslp_reader.h: Now reads and stuffs the wils2 and wils3 loop structures. 2006-06-23 16:15 tag qdp1-20-8 2006-06-23 16:15 tag qdp1-20-8-pre1 2006-06-23 16:15 tag qdp1-20-8-pre2 2006-06-23 16:15 bjoo * other_libs/xpath_reader/: include/xml_simplewriter.h, lib/xml_simplewriter.cc: Patched xm_simplewriter to write longer floats and even longer doubles 2006-06-17 14:49 edwards * main/strippers/strip_mesonspec.cc: Hacked around different smearings. 2006-06-07 22:29 edwards * main/formfac/wavefuncs.cc: Bug fix in Gamma10. 2006-06-07 22:22 edwards * lib/formfac/ff_mom_list.cc: Removed debugging comment. 2006-06-07 22:21 edwards * main/formfac/wavefuncs.cc: Fixed tex comments. 2006-06-07 22:18 edwards * main/formfac/: operators.cc, wavefuncs.cc, wavefuncs.h: Fixed gamma5*nabla_mu to overlap onto rho0. 2006-06-07 22:18 edwards * main/formfac/file_test.cc: Some more slight adjustments on output. 2006-06-07 17:58 edwards * main/formfac/: file_test.cc, operators.cc, operators.h, wavefuncs.cc, wavefuncs.h: Added Gamma(n) operators and wavefuncs. File test now explicitly loops over these critters. 2006-06-07 14:04 edwards * main/formfac/: file_test.cc, operators.cc, operators.h, wavefuncs.h: Changed names of particles from "pi_0" to "pi0" and the like. Started a translation map in file_test. 2006-06-07 14:04 edwards * main/formfac/file_test.ini.xml: First version. 2006-06-07 13:13 edwards * main/formfac/file_test.cc: Seems to work. 2006-06-07 13:13 edwards * main/formfac/operators.cc: Added callbacks and registration for the simple gamma like operators. 2006-06-07 02:25 edwards * main/formfac/file_test.cc: Added linkage hack. 2006-06-07 02:23 edwards * main/formfac/: file_test.cc, operators.cc, operators.h, operators_factory.h, wavefuncs.cc, wavefuncs.h: Added factory construction for operators. 2006-06-07 02:22 edwards * main/formfac/Makefile.am: Added operators.{h,cc} to file_test. 2006-06-07 02:21 edwards * include/formfac/formfac_qsq.h, lib/formfac/ff_mom_list.cc: Added LatticeParam writer. 2006-06-07 02:20 edwards * include/Makefile.am: Added objfactory.h 2006-06-07 02:20 edwards * include/adat/objfactory.h: Added from chroma. 2006-06-06 00:29 edwards * main/formfac/file_test.cc: Ooops, bug fix. Set tol check to < tol. 2006-06-06 00:22 edwards * main/formfac/: file_test.cc, wavefuncs.cc, wavefuncs.h: Complete (?) wavefunctions. New file_tester. 2006-06-06 00:21 edwards * main/formfac/Makefile.am: Added file_test and wavefuncs. 2006-06-05 20:43 dudek * main/formfac/a0_photon_fit_cons.cc: removed unneccesary debugging output 2006-06-05 17:37 edwards * main/formfac/: wavefuncs.cc, wavefuncs.h: First version. 2006-06-05 17:31 dudek * main/formfac/a0_photon_fit_cons.cc: fixed source/sink error in conserved current option 2006-06-05 00:36 edwards * main/sfpcac/Makefile.am: Made check programs bin programs. Added wilslp_ratio. 2006-06-05 00:36 edwards * main/sfpcac/: wilslp_ratio.cc, wilslp_reader.cc, wilslp_reader.h: First versions. 2006-06-04 16:02 edwards * main/sfpcac/: sf_plane_fit_mass_csw.grace1.xsl, sf_plane_fit_mass_csw.grace2.xsl: First version. 2006-06-04 16:01 edwards * main/sfpcac/sf_plane_fit_mass_csw.cc: Added some more output. 2006-06-04 01:48 edwards * main/sfpcac/: sf_line_fit_csw.cc, sf_plane_fit_mass_csw.cc: Added checks of decay_dir. 2006-06-04 01:10 edwards * main/sfpcac/: sf_reader.cc, sf_reader.h: Added read of clovCoeff based on decay_dir. 2006-06-04 01:10 edwards * main/sfpcac/: planefit.cc, planefit.h: Added calculation of deviates. 2006-06-04 00:55 edwards * main/sfpcac/planefit.cc: Fixed the chi_sq. The previous method was conceptually wrong. Now it should be correct. 2006-06-02 16:07 dudek * main/formfac/pion_pion_fit.cc: pion ff fit method 2006-06-02 16:02 dudek * main/formfac/pion_b1_fit.cc: added pion b1 2006-06-02 16:01 dudek * main/formfac/b1_pion_fit.cc: added b1-pion transition 2006-06-02 15:53 dudek * main/formfac/: a0_photon_fit.cc, a0_photon_fit_cons.cc, pion_photon_fit.cc: added photon transition codes 2006-06-02 15:39 dudek * include/formfac/formfac_util.h, lib/formfac/ff_util.cc: includes photon dispersion 2006-06-02 15:35 dudek * main/formfac/: Makefile.am, a0_2photon.cc, a0_2photon.ini.xml, a0_ff.cc, a0_rho_fit.axis2.xsl, a0_rho_fit_fold.cc, ff_driver.cc, pion_2photon.axis2.xsl, pion_2photon.cc, pion_2photon.ini.xml, pion_b1_fit_fold.cc, pion_ff.ini.xml, pion_fit.cc, pion_fit.ini.xml, pion_rho_fit.cc, pion_rho_fit_fold.cc, pion_rho_fit_fold_exc.cc, rho_a0_fit.axis2.xsl, rho_a0_fit.cc, rho_a0_fit.grace2.xsl, rho_a0_fit_fold.cc, rho_a1_fit.cc, rho_a1_fit_fold.cc, rho_fit_fold.cc, rho_pion_fit.cc, rho_pion_fit.ini.xml, rho_pion_fit_fold.cc, rho_pion_fit_fold.ini.xml, rho_pion_fit_fold_exc.cc: various changes to three point fitters 2006-06-02 15:29 tag adat1-24-0 2006-06-02 15:29 edwards * aclocal.m4, configure: Induced changes 2006-06-02 15:29 edwards * NEWS: Info on 1.24.0 2006-06-02 15:28 edwards * configure.ac: Changed to 1.24.0 2006-06-02 15:27 edwards * main/sfpcac/: q_mass.h, q_mass_dm.cc: Start of some new routines. Changed m_1 and m_2 to have c_A*s_1 added appropriately. 2006-06-01 23:01 edwards * main/sfpcac/sf_reader.cc: Added reading of clovCoeffR 2006-06-01 23:00 edwards * main/sfpcac/sf_reader.h: Removed some unused code. 2006-05-31 23:25 edwards * main/sfpcac/: sf_line_fit_csw.cc, sf_plane_fit_mass_csw.cc, sf_single_mass.cc: New calling args to quark_mass_simple. 2006-05-31 23:25 edwards * main/sfpcac/sf_plane_fit_mass_csw.axis2.xsl: First version. 2006-05-31 23:24 edwards * main/sfpcac/: sf_line_fit_csw.axis.xsl, sf_plane_fit_mass_csw.axis.xsl: Improvements. 2006-05-31 23:24 edwards * main/sfpcac/sf_reader.cc: Removed explicit reference to /purgaug. 2006-05-31 23:24 edwards * main/sfpcac/sf.ini.xml: Now uses proper conventions. 2006-05-31 23:23 edwards * main/sfpcac/: q_mass.h, q_mass_dm.cc: Pass in StartEnd_t struct instead of x0,y0. 2006-05-31 23:23 edwards * main/sfpcac/planefit.cc: Some trivial rearrangements. 2006-05-31 17:41 edwards * main/sfpcac/: sf_fit_csw.axis.xsl, sf_fit_csw.cc, sf_line_fit_csw.axis.xsl, sf_line_fit_csw.cc, sf_plane_fit_mass_csw.axis.xsl, sf_plane_fit_mass_csw.cc, sf_single_mass.cc: Added a plane fitter. Tried to standardize namings. 2006-05-31 17:40 edwards * main/sfpcac/: planefit.cc, planefit.h: New version. 2006-05-31 17:40 edwards * main/sfpcac/: linefit.cc, linefit.h: Changed LinFit to LineFit. 2006-05-31 17:40 edwards * main/sfpcac/Makefile.am: Added sf_plane_fit. Moved sf_fit to sf_line_fit. 2006-05-31 13:56 edwards * main/sfpcac/sf_fit_csw.axis.xsl: First version. 2006-05-31 13:56 edwards * main/sfpcac/: planefit.cc, planefit.h: First versions. 2006-05-31 13:56 edwards * main/sfpcac/sf_fit_csw.cc: Moved around tree level value. 2006-05-31 11:03 edwards * main/strippers/strip_mesonspec.cc: Bug fix. Need to have default cases for initializing Pt_src, etc. otherwise they are not defined. 2006-05-31 00:14 edwards * main/sfpcac/: sf.ini.xml, sf_uncorr_mass_list_analyze.ini.xml: New parameter input. 2006-05-31 00:12 edwards * main/sfpcac/: sf_fit_csw.cc, sf_single_mass.cc: Switched to new input. New output diagnostics. 2006-05-31 00:02 edwards * main/sfpcac/linefit.cc: Bug fix! The xsum was done incorrectly. 2006-05-30 23:21 edwards * main/sfpcac/sf_reader.cc: Bug fix, or rather interpretation fix. I had the order of the "_1" and "_2" reversed. 2006-05-30 17:28 edwards * main/sfpcac/q_mass.h: Added new stuff. 2006-05-30 17:27 edwards * main/sfpcac/q_mass_dm.cc: Bug fix in calculation of "s_{1,2}". 2006-05-29 11:31 edwards * main/sfpcac/: sf_fit_csw.cc, sf_reader.h, sf_single_mass.cc: Fixes. 2006-05-29 11:29 edwards * main/sfpcac/Makefile.am: Moved sf_uncorr prog to EXTRA. 2006-05-26 01:22 tag adat1-23-0 2006-05-26 01:22 edwards * NEWS: Info on 1.23 2006-05-26 01:21 edwards * configure: Induced changes 2006-05-26 01:17 edwards * aclocal.m4: Induced changes 2006-05-26 01:16 edwards * configure.ac: Changed to 1.23 2006-05-26 01:15 edwards * main/strippers/strip_mesonspec.cc: Overhauled stripper. 2006-05-26 01:14 edwards * main/strippers/Makefile.am: Removed displace_funcmap dependency from strip_mesonspec 2006-05-21 00:35 tag adat1-22-0 2006-05-21 00:35 edwards * NEWS: Info on 1.22.0 2006-05-21 00:33 edwards * main/stoch/stoch_baryon.cc: New baryon input. 2006-05-21 00:33 edwards * main/stoch/stoch_meson.cc: Added reading of file_xml 2006-05-21 00:33 edwards * main/stoch/: read_operdat.cc, read_operdat.h: Added reading of file_xml. 2006-05-21 00:31 edwards * aclocal.m4, configure: Induced changes. 2006-05-21 00:30 edwards * configure.ac: Changed to 1.22 2006-05-19 17:11 tag adat1-21-0 2006-05-19 17:11 edwards * NEWS: Info on 1.21.0 2006-05-17 17:14 kostas * aclocal.m4, include/Makefile.am, include/covfit/fitters/chiPTlog.h, include/covfit/fitters/fitfunctions.h, main/fitters/Makefile.am: added genneric chiPT log fit function 2006-05-12 16:15 edwards * main/stoch/stoch_baryon.cc: Made ensemble aware. 2006-05-12 15:21 edwards * main/stoch/stoch_meson.cc: Made ensemble aware. 2006-05-12 14:44 edwards * main/stoch/: stoch_baryon.cc, stoch_meson.cc: Fixed initP bug. Made meson do ensemble average. 2006-05-11 23:56 edwards * main/stoch/stoch_baryon.cc: Switch to new operator form. 2006-05-10 17:27 edwards * configure: Induced changes. 2006-05-10 17:27 edwards * configure.ac: Changed to 1.21 2006-05-10 17:27 edwards * include/ensem/ensem_ensem.h: Added pokeSpin 2006-05-10 17:25 edwards * main/stoch/stoch_meson.cc: Changed from Complex to DComplex - should have no affect. 2006-05-10 17:25 edwards * main/stoch/: Makefile.am, stoch_baryon.cc: Added stoch_baryon.cc 2006-05-07 00:15 edwards * main/formfac/nucleon_ff.cc: Turned on spatial directions in fits. 2006-05-06 23:55 edwards * lib/formfac/ff_manage.cc: Added debugging. 2006-05-06 23:55 edwards * lib/formfac/ff_lsq.cc: Added some currently commented out debugging steps that print the mean of the matrix and rhs. 2006-05-06 23:54 edwards * lib/formfac/ff_bb.cc: Commented out debugging. 2006-05-06 23:53 edwards * main/formfac/: nucleon_ff.cc, nucleon_ff.ini.xml: Fixes. Seems to produce something sensible! 2006-05-06 21:39 edwards * main/formfac/nucleon_ff.ini.xml: Changed to using the nonrel 2pts "_3". 2006-05-06 20:34 edwards * lib/formfac/ff_manage.cc: Added some comments. 2006-05-06 13:28 edwards * lib/formfac/ff_bb.cc: Turned off debugging on older readers. 2006-05-06 13:22 edwards * include/ensem/ensem_ensem.h, include/ensem/ensem_obsscalar.h, include/ensem/ensem_obstensor.h, include/ensem/ensem_obsvector.h, include/ensem/ensem_scalarsite_defs.h, lib/formfac/ff_manage.cc: Added initialization checks. Overhauled ff_manage to support links. 2006-05-06 10:31 edwards * main/formfac/nucleon_ff.cc: Fixes. 2006-05-05 17:35 edwards * main/formfac/: nucleon_ff.cc, nucleon_ff.ini.xml: Fixes. 2006-05-05 16:27 edwards * main/formfac/: nucleon_ff.cc, nucleon_ff.ini.xml: Updates. 2006-05-04 23:13 tag adat1-20-0 2006-05-04 23:13 edwards * NEWS: Info on 1.20 2006-05-04 23:11 edwards * aclocal.m4, configure: Induced changes. 2006-05-04 23:10 edwards * configure.ac: Changed to 1.20 2006-05-04 23:09 edwards * main/strippers/strip_bar3ptfn.cc: Support version 11 output (now with extra gamma_insertion similar to building_blocks.) 2006-05-03 15:29 kostas * aclocal.m4, include/Makefile.am: Added baryon one loop chiPT functions 2006-05-02 23:28 edwards * main/sfpcac/sf_fit_csw.cc: First version. 2006-05-02 23:28 edwards * main/sfpcac/sf_single_mass.cc: Changed usage output. Removed linefit.h 2006-05-02 23:27 edwards * main/sfpcac/: linefit.cc, linefit.h: Added xml writer version. 2006-05-02 23:27 edwards * main/sfpcac/Makefile.am: Added sf_fit_csw 2006-05-02 23:18 edwards * main/sfpcac/linefit.cc: Put in check of ndof before computing Q. 2006-05-02 22:16 edwards * main/sfpcac/sf_single_mass.cc: Small cleanup. 2006-05-02 22:06 edwards * configure: Induced changes. 2006-05-02 22:04 edwards * include/io/adat_xmlio.h, lib/io/adat_xmlio.cc: Added some print function to XMLBufferWriter. 2006-05-02 22:02 edwards * aclocal.m4: Induced changes. 2006-05-02 22:01 edwards * main/sfpcac/sf_reader.cc: Some experimental stuff. Not turned on. 2006-05-02 21:13 edwards * main/sfpcac/: sf_reader.cc, sf_single_mass.cc: Finally a performant version. 2006-05-02 21:09 edwards * lib/io/adat_xmlio.cc: Removed some unused code. Major change is to make sure XMLBufferWriter.str() adds a "\n" to the stream. Having a nice newline seems to keep the XMLReader from barfing. 2006-05-02 21:08 edwards * include/io/adat_xmlio.h: Added new XMLReader function 2006-04-30 18:22 edwards * main/sfpcac/: sf_reader.h, sf_single_mass.cc: Further cleanups. 2006-04-28 23:31 edwards * main/sfpcac/: Makefile.am, sf_reader.cc, sf_reader.h, sf_single_mass.cc: Intermediate fix. 2006-04-24 16:56 kostas * aclocal.m4, include/covfit/fitters/BaryonFfunc.h, include/covfit/fitters/BaryonSfunc.h, include/covfit/fitters/fitfunctions.h: Added the strange functions that apear in HBchiPT 2006-04-22 18:12 edwards * main/sfpcac/: Makefile.am, q_mass_dm.cc, sf_reader.cc, sf_reader.h, sf_uncorr_mass_list_analyze.cc, sf_uncorr_mass_list_analyze.ini.xml: First working version. 2006-04-19 23:39 tag adat1-19-0 2006-04-19 23:39 edwards * main/strippers/Makefile.am: Moved strip_mesonspec to noinst codes. 2006-04-19 23:38 edwards * NEWS: Info on 1.19 2006-04-19 23:30 edwards * main/strippers/: displace_funcmap.cc, strip_mesonspec.cc: Fixed to work in cross corr case. 2006-04-19 22:10 edwards * aclocal.m4, configure: Induced changes. 2006-04-18 11:42 edwards * aclocal.m4, configure: Induced changes. 2006-04-18 11:42 edwards * configure.ac: Added configure of sfpcac. Changed to 1.19 2006-04-18 11:41 edwards * main/sfpcac/: Makefile.am, linefit.cc, linefit.h, q_mass.h, q_mass_dm.cc, sf_uncorr_mass_list_analyze.cc: New version. 2006-04-17 21:30 edwards * lib/Makefile.am: Added numerical recipe routines. 2006-04-17 21:30 edwards * lib/recipes/: gammln.cc, gammp.cc, gammq.cc, gcf.cc, gser.cc: Added more NR routines. 2006-04-17 21:29 edwards * include/ensem/ensem_ensem.h: Some more debugging on resize failures. 2006-04-17 21:29 edwards * include/ensem/ensem_obstensor.h: Fixed debugging comment. 2006-04-17 18:31 edwards * include/ensem/: ensem_ensem.h, ensem_newops.h, ensem_obsscalar.h, ensem_obsvector.h: Added shift, cshift and EScalar pow. 2006-04-11 01:08 edwards * lib/recipes/svdfit.cc: Fixed declaration. 2006-04-11 00:43 edwards * aclocal.m4: Induced changes. 2006-04-11 00:43 edwards * main/strippers/: displace_funcmap.cc, strip_mesonspec.cc: Further stripper support. 2006-04-04 21:22 kostas * main/strippers/: strip_mres.cc, strip_mresZa.cc: fixed up strip_mres 2006-04-04 14:19 kostas * main/strippers/strip_mresZa.cc: added version 9 input 2006-03-27 15:02 edwards * main/strippers/displace_funcmap.cc: Added polarization directions to name. 2006-03-25 00:34 edwards * main/strippers/displace_funcmap.cc: Code cleanups. 2006-03-25 00:29 edwards * main/strippers/displace_funcmap.cc: Bug fixes. Actually, just some wrong output names. 2006-03-23 15:36 edwards * main/strippers/displace_funcmap.cc: Changed a name of a 0-- to 0mm. 2006-03-22 17:31 bjoo * main/ensem/: Makefile.am, meff.cc: Dumb effective mass calculator 2006-03-15 14:55 kostas * aclocal.m4, include/Makefile.am, include/covfit/fitters/fitfunctions.h: added some fit fitfunctions 2006-03-15 14:17 tag qdp1-20-2 2006-03-15 14:17 tag qdp1-20-3 2006-03-15 14:17 tag qdp1-20-3-pre3 2006-03-15 14:17 tag qdp1-20-3pre1 2006-03-15 14:17 tag qdp1-20-3pre2 2006-03-15 14:17 tag qdp1-20-4 2006-03-15 14:17 tag qdp1-20-5 2006-03-15 14:17 tag qdp1-20-6 2006-03-15 14:17 tag qdp1-20-7 2006-03-15 14:17 kostas * other_libs/xpath_reader/include/xml_array.h: added some math funcs 2006-03-14 13:39 kostas * include/covfit/fitters/Lookup.h: Lookup table function 2006-03-03 10:25 edwards * main/formfac/a0_2photon.axis2.xsl: New file 2006-03-03 03:01 tag adat1-18-0 2006-03-03 03:01 edwards * NEWS: Info on 1.18 2006-03-03 02:59 edwards * aclocal.m4, configure: Induced changes. 2006-03-03 02:58 edwards * configure.ac: Changed to 1.18 2006-03-03 02:58 edwards * include/: handle.h, adat/funcmap.h, adat/handle.h, adat/objfunctor.h, adat/singleton.h, adat/typeinfo.h, adat/typelist.h, adat/typemanip.h, adat/typetraits.h, formfac/formfac_manage.h: New includes from chroma. 2006-03-03 02:58 edwards * include/Makefile.am: New include files. 2006-03-03 02:43 edwards * main/strippers/: displace_funcmap.cc, displace_funcmap.h, strip_mesonspec.cc, strippers.h: Added Strip_mesonspec 2006-03-03 02:43 edwards * main/strippers/Makefile.am: Added new strip_mesonspec and displace_funcmap 2006-02-23 23:03 edwards * main/strippers/strip_spectrum.cc: Patch to fix generation of all baryon filenames. 2006-02-23 22:40 edwards * main/strippers/strip_spectrum.cc: Changes to baryon to force construction of all filenames. They may not all be used, however. 2006-02-23 19:00 tag qdp1-20-1 2006-02-23 19:00 tag xpath-reader-1-4-0 2006-02-23 19:00 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2006-02-23 18:59 edwards * other_libs/xpath_reader/: NEWS, configure.ac: Changed to 1.4.0 2006-02-23 10:53 bjoo * other_libs/xpath_reader/examples/replace_xpath.cc: replace_xpath.cc 2006-02-23 10:41 tag qdp1-20-0 2006-02-23 10:41 bjoo * other_libs/xpath_reader/: examples/Makefile.am, include/basic_xpath_reader.h, lib/basic_xpath_reader.cc: Added set function to XML Readers to allow replacement of expression at a given Xpath 2006-01-21 17:10 edwards * main/formfac/a0_2photon.cc: Removed some "&" refs. 2006-01-21 15:31 edwards * main/formfac/: pion_2photon.cc, a0_2photon.cc: Changed a newline to a endl 2006-01-20 17:23 edwards * main/formfac/pion_2photon.ini.xml: Revised path. 2006-01-20 13:43 edwards * lib/formfac/ff_util.cc: Bug fix of a bug fix. 2006-01-20 13:37 dudek * main/formfac/: pion_2photon.cc, pion_2photon.ini.xml: mods - anisotropy scaling & changed dispersion 2006-01-20 13:34 edwards * lib/formfac/ff_util.cc: Minor code morph. 2006-01-20 13:14 edwards * lib/formfac/ff_util.cc: Bug fix in energyDisp 2006-01-20 00:28 edwards * main/formfac/a0_2photon.ini.xml: Fixes. 2006-01-20 00:24 edwards * main/formfac/: a0_2photon.cc, a0_2photon.ini.xml: First version. 2006-01-20 00:23 edwards * main/formfac/pion_2photon.cc: Cleanups. 2006-01-20 00:22 edwards * main/formfac/Makefile.am: Added a0_2photon 2006-01-20 00:22 edwards * main/formfac/: pion_2photon.axis2.xsl, pion_2photon.ini.xml: Updates. 2006-01-19 22:11 edwards * main/formfac/pion_2photon.cc: Bug fix. 2006-01-19 22:07 edwards * main/formfac/pion_2photon.ini.xml: More tests. 2006-01-19 22:05 edwards * lib/formfac/ff_bb.cc: Commented out yet more debugging. 2006-01-19 22:04 edwards * lib/formfac/ff_bb.cc: Commented out some more debugging. 2006-01-19 22:04 edwards * main/formfac/pion_2photon.ini.xml: [no log message] 2006-01-19 21:42 edwards * main/formfac/: pion_2photon.cc, pion_2photon.ini.xml: New version of pion_2photon code. 2006-01-19 21:41 edwards * main/formfac/Makefile.am: Made pion_2photon in check_PROGRAMS. 2006-01-18 23:20 edwards * main/formfac/Makefile.am: Added pion_2photon to EXTRA_PROGRAMS. 2006-01-18 23:19 edwards * main/formfac/pion_2photon.cc: First version of pion->2*gamma . Not working yet. 2006-01-18 21:14 edwards * main/formfac/nucleon_ff.cc: Changed a spin matrix line. 2006-01-06 00:34 tag adat1-17-0 2006-01-06 00:34 edwards * main/formfac/nucleon_ff.cc: First version. 2006-01-06 00:34 edwards * main/ensem/test.cc: Added some gamma tests. 2006-01-06 00:34 edwards * include/ensem/: ensem_ensem.h, ensem_newops.h, ensem_obsscalar.h, ensem_obsvector.h, ensem_primgamma.h, ensem_primscalar.h: Fixed gamma support. 2006-01-06 00:31 edwards * Makefile.am: Turn off automatically building all main directories. 2006-01-06 00:29 edwards * main/formfac/Makefile.am: Added nucleon_ff.cc 2006-01-06 00:28 edwards * aclocal.m4: Induced changes. 2006-01-06 00:28 edwards * configure.ac: Changed to 1.17 2006-01-06 00:25 tag adat1-16-3 2006-01-06 00:25 edwards * NEWS: Info on 1.16.3 2006-01-04 14:09 edwards * main/formfac/: nucleon_ff.cc, nucleon_ff.ini.xml: First version 2006-01-03 01:06 edwards * main/utils/Makefile.am: Added lime lib. Also added check of adat lib. 2005-12-29 21:21 kostas * main/utils/: fold.cc, time_reverse.cc: fixed more command line parsing bugs... 2005-12-29 12:32 kostas * main/utils/time_reverse.cc: add correlator time reversal 2005-12-29 12:30 kostas * main/utils/fold.cc: fixed antiperiodic command line bug 2005-12-29 11:31 kostas * aclocal.m4, main/utils/Makefile.am, main/utils/time-reverse.cc: fixed automake stuff for time_reverse 2005-12-29 11:15 kostas * main/utils/: Makefile.am, time-reverse.cc: added time reversal utility 2005-12-25 00:46 tag adat1-16-2 2005-12-25 00:46 edwards * NEWS: Info on 1.16.2 2005-12-25 00:45 edwards * main/strippers/: strip_spectrum.cc, strip_spectrumOct.cc: New support for negative parity and update outputs. 2005-12-16 12:11 edwards * main/formfac/: a0_ff_fold.cc~, a0_rho_fit_fold.cc~, b1_pion_fit_fold.cc~, ff_driver.cc, pion_b1_fit_fold.cc~, pion_ff_fold.cc~, pion_rho_fit_fold.cc~, rho_a0_fit_fold.cc~, rho_a1_fit_fold.cc~, rho_fit_fold.cc~, rho_pion_fit.cc, rho_pion_fit.ini.xml, rho_pion_fit_fold.cc~: Removed extraneous backup files. Added save functionality to rho_pion 2005-12-16 12:11 edwards * include/formfac/formfac_solver.h: Call save function. 2005-12-16 12:10 tag adat1-16-1 2005-12-16 12:10 edwards * NEWS: INfo on 1.16.1 2005-12-16 09:16 dudek * main/formfac/: a0_ff_fold.cc, a0_ff_fold.cc~, a0_rho_fit_fold.cc, a0_rho_fit_fold.cc~, b1_pion_fit_fold.cc, b1_pion_fit_fold.cc~, pion_b1_fit_fold.cc, pion_b1_fit_fold.cc~, pion_ff_fold.cc, pion_ff_fold.cc~, pion_rho_fit_fold.cc, pion_rho_fit_fold.cc~, rho_a0_fit_fold.cc, rho_a0_fit_fold.cc~, rho_a1_fit_fold.cc, rho_a1_fit_fold.cc~, rho_fit_fold.cc, rho_fit_fold.cc~, rho_pion_fit_fold.cc, rho_pion_fit_fold.cc~: _fold.cc files fold over the second half of the lattice - almost all signs are consistent 2005-11-30 11:30 kostas * include/covfit/covarmat.h: fixed memory leak bug in CovarMat (when Construct was called) 2005-11-29 23:41 tag adat1-16-0 2005-11-29 23:41 edwards * main/stoch/: Makefile.am, read_operdat.cc, read_operdat.h, stoch_meson.cc: First crude version of stochastic operator estimation. 2005-11-29 23:40 edwards * lib/ensem/ensem_xmlio.cc: New xml support. 2005-11-29 23:40 edwards * NEWS: Info on 1.16.0 2005-11-29 23:38 edwards * aclocal.m4, configure: Induced changes. 2005-11-29 23:38 edwards * lib/Makefile.am: Added ensem_xmlio.cc 2005-11-29 23:37 edwards * configure.ac: Changed to 1.16. Added configure of main/stoch 2005-11-28 22:50 kostas * include/Makefile.am: fixed header file installation propblem 2005-11-22 23:36 kostas * main/fpi/calc_fpi.cc: .. 2005-11-22 23:32 kostas * main/mres/: calc_Za.cc, mres.cc: .. 2005-11-22 23:23 kostas * main/fitters/: cofit.cc, fit.cc: ... 2005-11-22 22:28 kostas * main/fitters/cofit.cc: fixed the path to fitters in cofit.cc 2005-11-22 22:18 kostas * include/Makefile.am, include/covfit/fitters/chiPTfp.h, include/covfit/fitters/expon.h, include/covfit/fitters/exponaper.h, include/covfit/fitters/exponaper_bar.h, include/covfit/fitters/exponper.h, include/covfit/fitters/fitfunctions.h, include/covfit/fitters/polynomium.h, main/fitters/Makefile.am, main/fitters/chiPTfp.h, main/fitters/expon.h, main/fitters/exponaper.h, main/fitters/exponaper_bar.h, main/fitters/exponper.h, main/fitters/fit.cc, main/fitters/fitfunctions.h, main/fitters/polynomium.h: moved the fitter header files into the main include tree 2005-11-22 22:16 kostas * main/utils/jack_ratio.cc: moved fitter headers into the main include tree 2005-11-21 22:00 kostas * main/fpi/calc_fpi.cc: adjusted fpi so that it can do fK 2005-11-21 15:52 tag adat1-15-2 2005-11-21 15:52 edwards * main/strippers/strip_spectrum.cc: Now support new smeared source format. 2005-11-21 15:33 edwards * NEWS: Info on 1.15.2 2005-11-20 16:50 edwards * main/strippers/strip_spectrum.cc: Added reading of source_type or Source/SourceType 2005-11-17 21:23 edwards * main/strippers/strip_bar3ptfn.cc: Added printing of the sink_mom onto the end of the file name. 2005-11-14 16:38 dudek * main/formfac/pion_rho_fit.cc: rho sink - signs consistent with rho_pion & hopefully correct absolutely 2005-11-14 16:37 dudek * main/formfac/rho_pion_fit.cc: have finally correctly implemented signs - rho_pion now consistent with pion_rho 2005-11-10 15:42 dudek * main/formfac/rho_fit.ini.xml: ini file for rho form-fac fitter 2005-11-10 15:40 dudek * main/formfac/rho_fit.cc: rho form-factor fitter - uses fit method - signs should be consistent 2005-11-10 13:18 dudek * main/formfac/a0_rho_fit.cc: fixed the sign fix! 2005-11-10 10:42 dudek * main/formfac/rho_pion_fit.cc: added an overall minus sign to (hopefully) get the sign of V "right" - BEWARE this quantity is phase convention dependent 2005-11-10 10:18 dudek * main/formfac/a0_rho_fit.ini.xml: lime file to cache 2005-11-10 10:17 dudek * main/formfac/a0_rho_fit.cc: checked signs and factors of i - should be consistent with rho_a0_fit 2005-11-10 10:09 dudek * main/formfac/rho_a0_fit.ini.xml: large lime files saved in the cache directory 2005-11-10 10:07 dudek * main/formfac/rho_a0_fit.cc: checked signs and factors of i with time reversal sym and Mink->Euclid mapping 2005-11-10 09:50 dudek * main/formfac/a0_ff.axis2.xsl: axis plot stylesheet for a0 form-factor 2005-11-09 11:11 dgr * main/ttt/qqq_props.cc: Modified to extract lattice sizes from XML record that exists in latest chroma - backward compatible 2005-11-09 10:31 dudek * main/formfac/a0_ff.ini.xml: ini file for a0_ff 2005-11-09 10:26 dudek * main/formfac/a0_ff.cc: scalar form-factor by the ratio method - analogue of pion_ff 2005-11-08 17:54 adamant * main/ttt/corr_info.cc: Corrected a bug which causes problems with 1x1 matrices 2005-11-02 10:52 kostas * include/covfit/fitter.h: removed a not needed include malloc.h 2005-10-30 16:17 kostas * main/utils/: Makefile.am, jack_ratio.cc: added jack_ratio utility 2005-10-30 15:10 kostas * main/utils/average_proplist.cc: fixed average_proplist 2005-10-30 14:58 kostas * main/utils/: Makefile.am, average_proplist.cc: adde average_proplist 2005-10-30 14:15 kostas * main/utils/: Makefile.am, shift_corrfunc.cc: Added the correlation function shift utility 2005-10-18 16:55 adamant * main/ttt/ttt.cc: Now allows 'all' as a channel option, uses 'flush' for status messages, and can handle diagonal correlator matrices 2005-10-18 16:39 adamant * main/ttt/corr_info.h: Added 'number_of_terms()' to help handle diag matrices 2005-10-18 16:38 adamant * main/ttt/: compute_corrs.cc, corr_info.cc: Added ability to handle diag matrices 2005-10-17 00:30 tag qdp1-16-2 2005-10-17 00:30 tag qdp1-16-3 2005-10-17 00:30 tag qdp1-17-0 2005-10-17 00:30 tag qdp1-17-1 2005-10-17 00:30 tag qdp1-17-2 2005-10-17 00:30 tag qdp1-18-0 2005-10-17 00:30 tag qdp1-18-1 2005-10-17 00:30 tag qdp1-18-2 2005-10-17 00:30 tag qdp1-18-3 2005-10-17 00:30 tag qdp1-19-0 2005-10-17 00:30 tag xpath-reader-1-3-2 2005-10-17 00:30 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2005-10-17 00:30 edwards * other_libs/xpath_reader/: include/basic_xpath_reader.h, lib/basic_xpath_reader.cc: Moved inline functions to lib file. 2005-10-17 00:29 edwards * other_libs/xpath_reader/: NEWS, configure.ac: Changed to version 1.3.2 2005-10-13 21:33 kostas * main/utils/: Makefile.am, fold.cc: added propagator fold code 2005-10-12 23:17 kostas * configure, configure.ac, include/covfit/proplist.h, lib/covfit/proplist.cc, main/Makefile.am, main/utils/Makefile.am, main/utils/concat_and_scale_proplist.cc, main/utils/concat_proplist.cc: added main/utils subdirectory with some useful main programs... 2005-10-05 10:11 kostas * main/: fitters/Makefile.am, fitters/chiPTfp.h, strippers/strip_mresZa.cc: added mpi^4 term in chiPTfpi and also added it to the makefiles 2005-10-03 12:04 kostas * main/fitters/: chiPTfp.h, fitfunctions.h: fixed bugs 2005-10-03 11:52 kostas * main/fitters/chiPTfp.h: fpi chipt fit function 2005-09-29 13:58 edwards * main/strippers/strip_buildingblocks.cc: Small bug fix - moved fclose of check of first arg to within the error message. Avoid fclose(0). 2005-09-29 13:39 edwards * main/strippers/strip_bar3ptfn.cc, main/strippers/strip_buildingblocks.cc, main/strippers/strip_mres4D.cc, main/strippers/strip_nCG.cc, main/strippers/strip_wallformfac.cc, include/recipes/nr.h, include/recipes/nrtypes.h, include/recipes/nrtypes_nr.h, include/recipes/nrutil.h, include/recipes/nrutil_nr.h, include/recipes/print_array.h, lib/recipes/pythag.cc, lib/recipes/svbksb.cc, lib/recipes/svdcmp.cc, lib/recipes/svdfit.cc, lib/recipes/svdvar.cc, main/strippers/strip_mres.cc: Removed dos-isms. 2005-09-29 11:36 tag adat1-15-1 2005-09-29 11:36 edwards * main/strippers/strip_buildingblocks.cc: Changed to support v3 reader. 2005-09-29 11:36 edwards * include/formfac/formfac_bb.h, lib/formfac/ff_bb.cc, lib/formfac/ff_manage.cc: Update to use version 3 reader. 2005-09-29 11:34 edwards * NEWS: Info on 1.15.1 2005-09-19 17:51 edwards * lib/formfac/ff_mom_list.cc: Bug fix in "dot"! 2005-09-09 11:02 dudek * main/formfac/: Makefile.am, rho_a0_fit.cc, rho_a0_fit.ini.xml, rho_a1_fit.cc: edited rho_a0_fit to allow 000 000 case 2005-09-06 17:25 edwards * main/formfac/rho_a1_fit.axis2.xsl: Copied from other axis2 files. 2005-09-06 16:59 edwards * main/formfac/rho_a1_fit.cc: Fixes to use correct sz and dump all the nFF&something stuff. 2005-09-06 16:56 edwards * main/formfac/rho_a1_fit.ini.xml: Input file. 2005-09-06 16:28 edwards * main/formfac/: Makefile.am, rho_a1_fit.cc: Added rho_a1_fit 2005-09-06 15:33 edwards * main/formfac/extract_Z_rho_mom: Fixed normalization to agree with avg_stripped_files script. 2005-09-01 13:19 dudek * main/formfac/: Makefile.am, a0_rho_fit.axis1.xsl, a0_rho_fit.axis2.xsl, a0_rho_fit.cc, a0_rho_fit.ini.xml, pion_ff.ini.xml, rho_a0_fit.axis2.xsl, rho_a0_fit.ini.xml, rho_pion_fit.axis2.xsl, rho_pion_fit.ini.xml: dudek added a0_rho_fit.cc and associated ini/axis files 2005-09-01 01:03 tag adat1-15-0 2005-09-01 01:03 edwards * main/ttt/: qqq_props.cc, qqq_props.h, test_corr_info.cc, test_qqq_props.cc, ttt.cc: Some indenting. 2005-09-01 01:01 edwards * aclocal.m4, configure: Induced changes. 2005-09-01 01:00 edwards * main/qqbar/: arrays.h, compute_corrs.cc, compute_corrs.h, corr_info.cc, corr_info.h, iohelp.cc, iohelp.h, qqbar.cc, qqbar.ini.xml, qqbar_props.cc, qqbar_props.h, test_corr_info.cc, test_qqbar_props.cc: Copied over from ttt and suitably modified. 2005-09-01 00:59 edwards * main/: formfac/Makefile.am, qqbar/Makefile.am, strippers/Makefile.am: Fixed dependencies. 2005-09-01 00:56 edwards * NEWS, configure.ac: Changed to 1.15.0 2005-08-13 17:31 tag adat1-14-1 2005-08-13 17:31 edwards * NEWS: Info on 1.14.1 2005-08-13 17:28 edwards * main/strippers/strip_buildingblocks.cc: Changed stripper to use lib/formfac/ff_bb.cc library routines. 2005-08-13 17:26 edwards * main/: formfac/Makefile.am, strippers/Makefile.am: Added build dependencies. 2005-08-13 17:24 edwards * lib/formfac/ff_bb.cc: Added a version 2 to BB reader. 2005-08-13 17:24 edwards * lib/io/adat_io.cc: Added BinaryWriter. Added checksums to BinaryReader. 2005-08-13 17:23 edwards * include/io/adat_io.h: Added BinaryReader and BinaryWriter. Added checksums. 2005-08-13 17:23 edwards * include/ensem/: ensem_forward.h, ensem_scalar_specific.h: Now have a BinaryReader and BinaryWriter. 2005-07-29 10:51 tag adat1-14-0 2005-07-29 10:51 edwards * NEWS: Info on 1.14.0 2005-07-29 10:39 edwards * configure: Induced changes. 2005-07-29 10:38 edwards * configure.ac: Changed to 1.14 2005-07-29 10:38 edwards * lib/: adat_byteorder.cc, adat_io.cc, adat_xmlio.cc: Moved down into "io" subdir. 2005-07-29 10:36 edwards * main/: ensem/calc.cc, ensem/calcc.cc, formfac/ff_driver.cc, formfac/pion_ff.cc, formfac/pion_fit.cc, formfac/rho_a0_fit.cc, formfac/rho_pion_fit.cc, fpi/calc_fpi.cc, mres_calc_exercise/eig_err.cc, strippers/get_pions.cc, strippers/strip_buildingblocks.cc, strippers/strippers.h, ttt/qqq_props.cc: Changed includes so old adat files are now down in "io" subdir. 2005-07-29 10:35 edwards * include/: adat.h, adat_io.h, adat_util.h, adat_xmlio.h, covfit/FitParams_io.h, covfit/FpiParams_io.h, ensem/ensem.h, formfac/formfac_qsq.h, io/adat_byteorder.h, io/adat_io.h, io/adat_util.h, io/adat_xmlio.h: Changed include of files now down in "io" subdir. 2005-07-29 10:34 edwards * lib/: formfac/ff_bb.cc, formfac/ff_manage.cc, io/adat_byteorder.cc, io/adat_crc32.cc, io/adat_io.cc, io/adat_xmlio.cc: Moved includes into "io". New crc. 2005-07-29 10:32 edwards * include/Makefile.am, lib/Makefile.am: Moved new/old files into "io" subdir. 2005-07-22 15:35 edwards * main/formfac/: rho_a0_fit.axis3.xsl, rho_pion_fit.axis3.xsl: Produce Qsq plots. 2005-07-21 17:40 tag adat1-13-14 2005-07-21 17:40 edwards * NEWS: Info on 1.13.14 2005-07-21 17:36 edwards * main/: ttt/qqq_props.cc, baryon_analysis/qqq_io.cc, baryons/read_qqq_prop.cc: Changed off_t to n_uint64_t 2005-07-21 17:36 edwards * main/ttt/Makefile.am: Added include of top_builddir of c-lime 2005-07-21 17:31 edwards * lib/formfac/ff_manage.cc: Switched from off_t to n_uinit64_t . 2005-07-21 14:43 tag LIVTAG_1 2005-07-21 14:43 tag LIVTAG_2 2005-07-21 14:43 tag c-lime1-2-3 2005-07-21 14:43 tag qdp1-15-0 2005-07-21 14:43 tag qdp1-15-1 2005-07-21 14:43 tag qdp1-15-2 2005-07-21 14:43 tag qdp1-15-3 2005-07-21 14:43 tag qdp1-15-4 2005-07-21 14:43 tag qdp1-16-0 2005-07-21 14:43 tag qdp1-16-1 2005-07-21 14:43 tag qio2-1-1 2005-07-21 14:43 tag qio2-1-2 2005-07-21 14:43 tag qio2-1-3 2005-07-21 14:43 tag qio2-1-4 2005-07-21 14:43 tag qio2-1-5 2005-07-21 14:43 tag qio2-1-6 2005-07-21 14:43 tag qio2-1-7 2005-07-21 14:43 detar * other_libs/c-lime/: examples/lime_contents.c, examples/lime_extract_record.c, examples/lime_extract_type.c, examples/lime_pack.c, examples/lime_unpack.c, include/lime_header.h, include/lime_reader.h, include/lime_writer.h, lib/lime_header.c, lib/lime_reader.c, lib/lime_writer.c: Further changes to support large files. 2005-07-20 17:59 edwards * main/formfac/: pion_ff.axis2.xsl, pion_fit.axis2.xsl, rho_a0_fit.axis2.xsl, rho_a0_fit.ini.xml, rho_pion_fit.ini.xml: Mre changes. 2005-07-20 17:59 edwards * main/formfac/: pion_fit.cc, rho_pion_fit.cc: Fixes. 2005-07-20 14:57 edwards * include/ensem/ensem_scalar_specific.h: Bug fix in antiSym<4> 2005-07-19 22:56 edwards * main/formfac/rho_pion_fit.grace2.xsl: Grace producer. 2005-07-19 18:54 tag adat1-13-13 2005-07-19 18:54 edwards * NEWS: Info on 1.13.13 2005-07-19 18:53 edwards * include/ensem/ensem_scalar_specific.h: Bug fix in antiSymmetricTensor for N=4 2005-07-19 18:51 edwards * main/formfac/pion_fit.cc: Start of new ident codes. 2005-07-19 18:50 edwards * main/formfac/: Makefile.am, rho_pion_fit.axis2.xsl, rho_pion_fit.cc, rho_pion_fit.ini.xml: New rho_pion_fit suite 2005-07-19 18:37 edwards * include/ensem/ensem_ensem.h: Bug fixes. 2005-07-18 18:13 tag qdp-1-14-4 2005-07-18 18:13 tag qdp-1-14-4_pre1 2005-07-18 18:13 tag qdp1-14-4 2005-07-18 18:13 tag qdp1-14-5 2005-07-18 18:13 detar * other_libs/c-lime/: examples/lime_contents.c, examples/lime_extract_record.c, examples/lime_extract_type.c, examples/lime_pack.c, examples/lime_unpack.c, examples/lime_writer_test1.c, lib/lime_fseeko.c, lib/lime_header.c, lib/lime_reader.c, lib/lime_utils.c, lib/lime_writer.c: Further corrections to support files > 2 GB. Correct bug in QIO_read_record_info.c that failed with ILDG partitioned files. 2005-07-17 23:16 edwards * main/formfac/rho_a0_fit.grace2.xsl: Grace producer. 2005-07-17 22:19 edwards * main/formfac/rho_a0_fit.cc: Arrgh. Switch to correct q=p_f - p_i conventions. 2005-07-17 21:37 edwards * main/formfac/rho_a0_fit.cc: Added negation of rho_y 3pt since there is a spurious sign from seqsource construction. 2005-07-17 21:27 edwards * lib/Makefile.am: Changed include path for builddir/c-lime 2005-07-17 09:09 tag qdp1-14-3 2005-07-17 09:09 detar * other_libs/c-lime/: aclocal.m4, configure, configure.ac, include/lime.h, include/lime_config_internal.h.in, lib/lime_writer.c: Large file support. See --enable-largefile 2005-07-14 22:53 edwards * main/formfac/pion_fit.cc: Fixed for possible case of transition FF. Removed erroneous case of mixed trans. ff. Excited source or sink have diff. Q^2, so can't be in same fit. 2005-07-14 22:44 edwards * main/formfac/rho_a0_fit.cc: Removed old propfact code. 2005-07-14 22:38 edwards * main/formfac/: pion_ff.ini.xml, pion_fit.ini.xml, rho_a0_fit.ini.xml: Fiddled with momenta. Change name of qsq.dat file. 2005-07-14 18:45 tag adat1-13-12 2005-07-14 18:45 edwards * include/formfac/formfac_qsq.h, lib/formfac/ff_manage.cc, lib/formfac/ff_mom_list.cc, main/formfac/pion_ff.cc, main/formfac/pion_ff.ini.xml, main/formfac/pion_fit.cc, main/formfac/pion_fit.ini.xml, main/formfac/rho_a0_fit.cc, main/formfac/rho_a0_fit.ini.xml: Changed to support either a MomentumRange or FixedMomentum list for formfacs. Now have a global qsq compute function thingy. 2005-07-14 18:44 edwards * NEWS: Info on 1.13.12 2005-07-12 23:13 edwards * include/ensem/ensem_primmatrix.h: Bug fix in operator-(PScalar,PMatrix). 2005-07-12 15:34 edwards * main/formfac/: pion_ff.axis1.xsl, pion_ff.axis2.xsl: Style sheets for pion_ff 2005-07-12 15:23 edwards * main/formfac/pion_ff.cc: Added some debugging writes. 2005-07-12 15:23 edwards * include/ensem/ensem_ensem.h: Fix. Added missing rescaling in operator*=(Ensem,Ensem) and /=. 2005-07-11 23:08 edwards * main/formfac/pion_ff.ini.xml: Changed paths for mass_0 and Z_V 2005-07-11 14:37 tag c-lime1-2-2 2005-07-11 14:37 tag qdp1-14-2 2005-07-11 14:37 tag qio2-1-0 2005-07-11 14:37 detar * other_libs/c-lime/examples/: Makefile.am, lime_extract_type.c: Add capability for inserting an ILDG LFN during partfile to singlefile conversion. Add another LIME extraction utility. Useful for extracting the LFN. 2005-07-10 22:53 tag adat1-13-11 2005-07-10 22:53 edwards * NEWS: Info on 1.13.11 2005-07-10 22:26 edwards * main/formfac/state.h: Fixed conventions on q = p_f - p_i. 2005-07-10 22:26 edwards * main/formfac/rho_a0_fit.cc: Moved to divide xi out of pp_i and pp_f. 2005-07-10 22:26 edwards * main/formfac/rho_a0_fit.ini.xml: Removed old paths. 2005-07-10 22:25 edwards * main/formfac/: pion_ff.cc, pion_fit.cc: Changed to have xi divide out of pp_i and pp_f. Fixed sign on -imag(threept). 2005-07-10 22:24 edwards * main/formfac/pion_fit.ini.xml: Removed old paths/ 2005-07-10 22:00 edwards * main/formfac/pion_ff.ini.xml: Fixed to conform to new data formats and locations. 2005-07-10 14:30 detar * other_libs/c-lime/examples/lime_contents.c: Fixing some compiler trivia. 2005-07-09 14:15 edwards * main/formfac/ff_driver.cc: Improved stdout format. 2005-07-09 13:42 edwards * main/formfac/rho_a0_fit.cc: Removed explicit momentum check in matelem_e. This is not needed after switching to double prec. 2005-07-09 13:20 edwards * lib/formfac/: ff_bb.cc, ff_manage.cc: Changed BB and management to explicit single prec. 2005-07-09 13:19 edwards * include/: ensem/ensem_precision.h, ensem/ensem_scalarsite_defs.h, formfac/formfac_bb.h, formfac/formfac_manage.h: Changed BB to explicit single prec. Changed default floating prec in ensem to double. 2005-07-09 13:19 edwards * main/formfac/: pion_ff.cc, pion_fit.cc, rho_a0_fit.cc: Changed to using explicit single precision on the 3-pts 2005-07-08 22:25 tag adat1-13-10 2005-07-08 22:25 edwards * NEWS: Info on 1.13.10 2005-07-08 21:55 edwards * main/formfac/rho_a0_fit.ini.xml: Changed mom_max 2005-07-08 21:54 edwards * main/formfac/rho_a0_fit.cc: Bug fixes. 2005-07-08 17:50 detar * other_libs/c-lime/: aclocal.m4, configure, examples/lime_contents.c, examples/lime_pack.c, include/lime_config_internal.h.in, lib/lime_header.c, lib/lime_reader.c, lib/lime_writer.c: Major changes to support ILDG formats and parallel I/O - ced 2005-07-08 17:28 detar * other_libs/c-lime/configure.ac: Preparing to commit qio-2.1.0 and lime-1.2.2 2005-07-08 14:11 edwards * main/formfac/rho_a0_fit.cc: Bug fix. 2005-07-08 13:04 edwards * main/formfac/rho_a0_fit.cc: Added spatial C1 & E1. Fixed some bugs in matelem's. 2005-07-08 11:43 edwards * main/formfac/rho_a0_fit.cc: Added some optional debugging. 2005-07-07 23:59 edwards * main/formfac/extract_Z_rho_mom: Added missing xi^2 from mass !! 2005-07-07 01:48 edwards * main/formfac/pion_fit.ini.xml: Commented out excited states. 2005-07-07 01:46 edwards * main/formfac/: pion_fit.axis1.xsl, pion_fit.axis2.xsl: New style sheets 2005-07-07 01:35 edwards * main/formfac/pion_fit.cc: Commented out printing. 2005-07-07 01:32 edwards * main/formfac/pion_fit.ini.xml: Changed qsq.dat to qsq_pion.dat 2005-07-07 01:31 edwards * main/formfac/pion_fit.ini.xml: Changed fitting range. 2005-07-07 01:30 edwards * main/formfac/pion_fit.cc: Fixed to use only space or time. 2005-07-07 00:36 edwards * main/formfac/: rho_a0_fit.axis1.xsl, rho_a0_fit.axis2.xsl: Style sheet files for rho-a0. 2005-07-07 00:36 edwards * main/formfac/extract_Z_rho_mom: Added echo-ing. 2005-07-07 00:02 edwards * main/formfac/rho_a0_fit.ini.xml: Fixed path. 2005-07-06 23:45 edwards * main/formfac/rho_a0_fit.cc: Put explicit checks of zero momenta. This could be problematic. Need to just skip somehow a q_sq=0 bin but I don't keep that info. 2005-07-06 22:35 edwards * include/ensem/ensem_ensem.h: Commented out debugging cout in pow. 2005-07-06 22:34 edwards * main/formfac/extract_Z_rho_mom: Dumb script 2005-07-06 22:31 edwards * main/formfac/: pion_ff.cc, pion_fit.cc: Added explicit passing of "state" name to Local thingies. 2005-07-06 22:30 edwards * main/formfac/state.h: Pass in explicit particle/state name 2005-07-06 22:30 edwards * main/formfac/: rho_a0_fit.cc, rho_a0_fit.ini.xml: Rho-a0 fitter and input. 2005-07-06 22:29 edwards * main/formfac/Makefile.am: Added rho_a0_fit.cc 2005-07-06 20:41 edwards * main/formfac/extract_matrix_Z: Use real matrix code. 2005-07-06 19:07 edwards * main/formfac/: extract_matrix_Z, extract_matvec_Z: Scripts for extracting masses and Z's. 2005-07-03 13:40 tag adat1-13-9 2005-07-03 13:40 edwards * main/formfac/: pion_ff.cc, test.cc, test2.cc: Cleaned up. 2005-07-03 13:40 edwards * main/formfac/Makefile.am: Moved some older codes to EXTRA_PROGRAMS. 2005-07-03 13:22 edwards * NEWS: Info on 1.13.9 2005-07-01 16:21 tag adat1-13-0 2005-07-01 16:21 edwards * main/formfac/plot_axis2.xsl: Different way to plot. 2005-07-01 13:13 edwards * lib/formfac/ff_mom_list.cc: Look at some debugging outut. 2005-07-01 13:12 edwards * include/formfac/formfac_solver.h: Added getFitRange 2005-07-01 13:12 edwards * main/formfac/plot_axis.xsl: Plot single FF. 2005-07-01 13:12 edwards * main/formfac/pion_ff.ini.xml: qcdi01 params. 2005-07-01 13:11 edwards * main/formfac/pion_fit.ini.xml: New input format. 2005-07-01 13:11 edwards * main/formfac/: ff_driver.cc, pion_fit.cc: Now give fit ranges. 2005-07-01 02:51 edwards * main/formfac/plot_axis.xsl: Fixed up 2005-07-01 02:41 edwards * main/formfac/: ff_driver.cc, pion_fit.cc: New support for multi-states. Still need to turn back on spatial parts. 2005-07-01 02:41 edwards * main/formfac/: plot_axis.xsl, plot_grace.xsl: Removed dosisms. 2005-07-01 02:34 edwards * lib/formfac/ff_lsq.cc: Added return of LLSq results. 2005-07-01 02:33 edwards * include/formfac/formfac_solver.h: Added LLSqResults. 2005-07-01 02:31 edwards * main/formfac/ff_driver.cc: Added printing of LLSq results. 2005-07-01 02:21 edwards * lib/formfac/ff_lsq.cc: Commented out verbose spewing of singular values in favor of just one message with a count. 2005-07-01 02:18 edwards * lib/formfac/ff_rotate.cc: Removed dosisms 2005-06-30 18:13 edwards * include/formfac/formfac_qsq.h: Added writer. 2005-06-30 16:49 edwards * lib/formfac/ff_mom_list.cc: Bug fixed. Got name of group correct. 2005-06-30 16:37 edwards * include/formfac/: formfac_bb.h, formfac_manage.h, formfac_qsq.h, formfac_util.h: removed dosisms 2005-06-30 16:16 edwards * lib/formfac/ff_mom_list.cc: Cleaned out dosisms 2005-06-30 15:51 edwards * main/formfac/make_mom_list.cc: Removed dosisms 2005-06-29 23:42 edwards * main/formfac/ff_driver.cc: Removed dosisms 2005-06-29 22:50 edwards * main/formfac/pion_fit.cc: Bug fix in decompose. 2005-06-29 22:36 edwards * main/formfac/pion_fit.cc: Removed dosisms 2005-06-29 22:34 edwards * main/formfac/state.h: Removed dos-isms. 2005-06-29 15:24 tag qdp1-14-1 2005-06-29 15:24 edwards * other_libs/xpath_reader/examples/: print_nodeset.cc, print_xpath.cc: Split into two. 2005-06-29 15:23 edwards * other_libs/xpath_reader/examples/Makefile.am: Added print_nodeset.cc 2005-06-28 14:59 edwards * main/formfac/pion_fit.cc: Now include excited states. 2005-06-28 14:59 edwards * main/formfac/make_mom_list.cc: Updated for newer interface. 2005-06-28 14:58 edwards * main/formfac/ff_driver.cc: Print out momenta used. 2005-06-28 14:58 edwards * include/formfac/formfac_qsq.h, lib/formfac/ff_manage.cc, lib/formfac/ff_mom_list.cc: Added XML writers and constructQsqFixedMom. 2005-06-26 14:10 edwards * include/formfac/formfac_manage.h: Added empty constructors for Z and E. 2005-06-26 14:09 edwards * main/formfac/: pion.xml.ini, pion_ff.ini.xml, pion_fit.ini.xml: Split off input to separate files for each main program. 2005-06-26 14:09 edwards * main/formfac/: pion_ff.cc, pion_fit.cc: Now different read inputs. Start support for multi-excited states in fit code. 2005-06-26 14:08 edwards * main/formfac/plot_axis.xsl: Hard code which column to print. 2005-06-26 14:08 edwards * main/formfac/plot_grace.xsl: Still working on it. 2005-06-25 23:56 edwards * main/formfac/ff_driver.cc: Some new output 2005-06-25 23:34 edwards * main/formfac/: pion_ff.cc, pion_fit.cc, state.h: Split off driver code to ff_driver.cc . Added fit version of fits. 2005-06-25 23:33 edwards * main/formfac/plot_axis.xsl: Helps plotting via axis 2005-06-25 23:32 edwards * main/formfac/: Makefile.am, ff_driver.cc: Added ff_driver.cc 2005-06-25 23:31 edwards * lib/formfac/ff_manage.cc: Added amplitudes. 2005-06-25 23:29 edwards * include/formfac/formfac_manage.h: Added Z class. 2005-06-25 23:29 edwards * include/formfac/formfac_solver.h: Added some new functions. 2005-06-24 17:49 edwards * main/strippers/strip_spectrum.cc: Changed hard-code loops of Ns*Ns to instead use meson_SP or whatever. 2005-06-23 17:40 tag adat1-13-8 2005-06-23 17:40 edwards * NEWS: Info on 1.13.8 2005-06-23 17:39 edwards * main/formfac/pion_ff.cc: Removed explicit cache file management. 2005-06-23 17:38 edwards * lib/formfac/ff_manage.cc: Finer grained version of cache file management. 2005-06-23 17:38 edwards * include/formfac/formfac_manage.h: More fine grained version of cache file management. 2005-06-23 02:37 edwards * main/formfac/: pion.xml.ini, pion_ff.cc: Added cache_file management. 2005-06-23 02:37 edwards * lib/formfac/ff_manage.cc: Added cache management. 2005-06-23 02:36 edwards * include/formfac/formfac_manage.h: Added sync cache 2005-06-23 02:35 edwards * main/formfac/Makefile.am: Added c-lime to libraries. 2005-06-23 02:35 edwards * lib/Makefile.am: Added c-lime to include path 2005-06-22 21:18 tag adat1-13-7 2005-06-22 21:18 edwards * NEWS: Info on 1.13.7 2005-06-21 18:55 edwards * main/formfac/pion.xml.ini: Changed from start/end cfg number to file list. 2005-06-21 18:54 edwards * main/formfac/pion_ff.cc: Moved off file management to state files. 2005-06-21 18:54 edwards * main/formfac/state.h: New state file stuff. 2005-06-21 18:52 edwards * main/formfac/Makefile.am: Added state.h 2005-06-21 18:51 edwards * include/handle.h: Carried over from chroma. 2005-06-21 18:50 edwards * include/formfac/formfac_manage.h, lib/formfac/ff_manage.cc: Moved off construction of filenames to abstract function objects. 2005-06-21 18:49 edwards * include/Makefile.am: Added handle.h 2005-06-19 02:43 edwards * lib/formfac/ff_manage.cc: Bug fix. 2005-06-19 02:43 edwards * main/formfac/pion_ff.cc: Bug fixes. 2005-06-19 00:00 edwards * main/formfac/pion_ff.cc: Dropped down to 2 FF. 2005-06-18 10:32 edwards * main/formfac/pion_ff.cc: Fixed up printing of xml output. 2005-06-18 09:38 edwards * include/formfac/formfac_util.h: Added energyDisp. 2005-06-18 09:37 edwards * include/formfac/formfac_qsq.h: Removed ensem.h 2005-06-18 01:10 edwards * lib/formfac/ff_util.cc: Added energyDisp. 2005-06-18 01:10 edwards * main/formfac/: pion.xml.ini, pion_ff.cc: Measure separately all 4 directions as a FF. 2005-06-17 00:04 tag adat1-13-6 2005-06-17 00:04 edwards * main/formfac/pion.xml.ini: Reflects new input structures. 2005-06-17 00:03 edwards * main/formfac/pion_ff.cc: Overhauled code. Moved off all IO stuff to management classes. 2005-06-17 00:02 edwards * lib/formfac/ff_mom_list.cc: Added some more structures for Qsq. Now have aniso and XML reading. 2005-06-17 00:02 edwards * lib/formfac/ff_manage.cc: Management classes. 2005-06-17 00:01 edwards * include/formfac/: formfac.h, formfac_manage.h, formfac_qsq.h: Added formfac_manage.h 2005-06-17 00:01 edwards * main/formfac/Makefile.am: Added dependency of binaries on DEPENDENCIES 2005-06-17 00:00 edwards * include/Makefile.am, lib/Makefile.am: Added formfac_manage.h and ff_manage.cc 2005-06-16 23:59 edwards * NEWS: Info on 1.13.6 2005-06-16 23:58 tag adat1-13-5 2005-06-16 23:58 edwards * NEWS: Info on 1.13.5 2005-06-16 17:17 edwards * main/formfac/pion_ff.cc: Switched to real only. 2005-06-16 12:22 edwards * main/formfac/pion_ff.cc: Use XML output. 2005-06-16 12:22 edwards * include/adat_xmlio.h, lib/adat_xmlio.cc: Added XMLArrayWriter. 2005-06-16 07:57 tag qdp1-13-1 2005-06-16 07:57 tag qdp1-14-0 2005-06-16 07:57 bjoo * other_libs/: c-lime/doc/Makefile.am, c-lime/Makefile.am, c-lime/lib/Makefile.am, c-lime/include/Makefile.am, c-lime/examples/Makefile.am, xpath_reader/Makefile.am, xpath_reader/lib/Makefile.am, xpath_reader/include/Makefile.am, xpath_reader/examples/Makefile.am: flopcounts Makefile.ams first 2005-06-15 17:18 edwards * main/formfac/pion_ff.cc: Commented out debugging. 2005-06-15 17:18 edwards * lib/formfac/ff_bb.cc: Commented out debugging 2005-06-15 17:11 edwards * main/formfac/pion_ff.cc: Removed some comments. Still a bunch... 2005-06-15 17:03 edwards * main/formfac/pion_ff.cc: Fixed enforcing the number of BB dirs. 2005-06-15 16:16 edwards * main/formfac/: pion.xml.ini, pion_ff.cc: More fixes. 2005-06-15 16:16 edwards * include/ensem/ensem_scalar_specific.h: Removed temp reference within norm2 2005-06-13 22:31 edwards * main/formfac/make_mom_list.cc: Cleaned up. 2005-06-13 21:40 edwards * lib/formfac/ff_bb.cc: Building blocks reader. 2005-06-13 21:40 edwards * lib/formfac/ff_mom_list.cc: Added "<" of TwoPtArg and ThreePtArg. 2005-06-13 21:39 edwards * lib/Makefile.am: Added ff_bb.cc - read building-blocks 2005-06-13 21:39 edwards * include/formfac/: formfac.h, formfac_bb.h, formfac_qsq.h: Added read of BuildingBlocks. New structs for 2 and 3pt funcs. 2005-06-13 21:38 edwards * include/ensem/ensem_obstensor.h: Added missing pokeObs 2005-06-13 21:38 edwards * include/Makefile.am: Added formfac_bb.h 2005-06-13 21:37 edwards * main/formfac/: pion.xml.ini, pion_ff.cc: Pion formfactor code. 2005-06-13 21:36 edwards * main/formfac/Makefile.am: Added pion_ff. Shortened dependencies. 2005-06-13 04:37 bjoo * other_libs/xpath_reader/configure: AR in xpath_reader 2005-06-11 16:42 edwards * main/strippers/strip_spectrum.cc: Changed a throw to an exit. 2005-06-11 10:19 edwards * main/strippers/strip_mres.cc: Changed path 2005-06-11 10:19 edwards * main/strippers/strip_mres.cc: Small cleanups. Changed path. Need something better for path - probably just pass it in. 2005-06-10 21:40 edwards * aclocal.m4: Induced changes. 2005-06-10 21:39 edwards * main/strippers/strip_hadspec.cc: Not finished version of hadspec stripper. 2005-06-10 21:38 edwards * main/strippers/strip_spectrum.cc: Support version 8 or propagator header. 2005-06-10 21:37 edwards * main/strippers/Makefile.am: Changed dependencies. 2005-06-08 00:03 edwards * main/ensem/test.cc: Test complex code. 2005-06-08 00:03 edwards * main/ensem/calcc.cc: Removed some output. Now agrees with "ensbc". 2005-06-07 19:34 edwards * main/strippers/strip_wallformfac.cc: Changed ensem type in header to match new ensem lib. 2005-06-07 19:33 edwards * main/strippers/strip_bar3ptfn.cc: Changed ensem type in header to match lib version of ensem. 2005-06-07 19:33 edwards * main/strippers/strip_buildingblocks.cc: Changed ensem type on header to "1" to match the new lib version of ensem. 2005-06-07 17:10 edwards * main/ensem/: Makefile.am, calcc.cc: Added complex version of calc 2005-06-07 07:35 bjoo * other_libs/xpath_reader/configure.ac: Added AC_CHECK_TOOL to look for AR in QDP++ and XPathReader 2005-06-02 21:49 kostas * include/covfit/covarmat.h, lib/covfit/CovarMat.cc: jackknifed covariance matrix 2005-06-02 17:35 kostas * aclocal.m4, include/covfit/covarmat.h: trivial modification 2005-05-30 21:46 edwards * main/strippers/strip_mres.cc: Fixed up paths. 2005-05-29 18:19 osborn * other_libs/c-lime/examples/lime_writer_test1.c: Small fixes in examples. 2005-05-29 18:01 osborn * other_libs/c-lime/: INSTALL, aclocal.m4, configure, configure.ac, config/depcomp, config/install-sh, config/missing, config/mkinstalldirs, examples/lime_contents.c, examples/lime_pack.c, lib/lime_reader.c, lib/lime_writer.c: Changed the num_sites functions to return int instead of size_t, since this is what QDP will support. Also minor cleanups and fixes. 2005-05-29 12:43 bjoo * main/strippers/strip_nCG.cc: oops 2005-05-29 12:26 bjoo * main/strippers/: Makefile.am, get_pions.cc, strip_nCG.cc: Updated strip_nCG added get_pions 2005-05-24 13:08 kostas * main/strippers/: Makefile.am, strip_spectrumOct.cc: the Octet spectrum stripper 2005-05-18 18:24 tag c-lime1-2-1 2005-05-18 18:24 tag qdp1-12-3 2005-05-18 18:24 tag qdp1-12-4 2005-05-18 18:24 tag qdp1-12-5 2005-05-18 18:24 tag qdp1-13-0 2005-05-18 18:24 tag qio2-0-2 2005-05-18 18:24 edwards * other_libs/c-lime/NEWS: Info on 1.2.1 2005-05-18 18:20 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2005-05-18 18:20 edwards * other_libs/c-lime/configure.ac: Changed to version 1.2.1 2005-05-18 18:19 edwards * other_libs/c-lime/: doc/Makefile.am, examples/Makefile.am, lib/Makefile.am: Removed VPATH's. 2005-05-17 11:00 tag adat1-13-4 2005-05-17 11:00 edwards * NEWS: Info on 1.13.4 2005-05-17 11:00 edwards * include/formfac/formfac_qsq.h, lib/formfac/ff_mom_list.cc, lib/formfac/ff_rotate.cc, main/formfac/ff.cc: Fixed big bug in ff_mom_list. Changed output of map to instead a list. 2005-05-17 10:59 edwards * main/formfac/ff.xml.ini: Changed inputs. 2005-05-16 20:46 tag adat1-13-3 2005-05-16 20:46 tag xpath-reader-1-3-1 2005-05-16 20:46 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2005-05-16 20:42 edwards * other_libs/xpath_reader/NEWS: Info on 1.3.1 2005-05-16 20:41 edwards * other_libs/xpath_reader/include/xml_array.h: New comparisons of arrays. 2005-05-16 20:41 edwards * NEWS: Info on 1.13.3 2005-05-16 20:38 edwards * lib/formfac/ff_mom_list.cc: Removed XMLArray stuff and moved it over to XMLarray 2005-05-16 20:37 edwards * lib/formfac/ff_lsq.cc: Commented out some debugging. 2005-05-16 20:37 edwards * include/formfac/formfac_qsq.h: Moved off all XMLArray stuff to XMLArray. 2005-05-16 20:36 edwards * main/formfac/ff.cc: Finally fixed and appears to work. At least in this limited still test case. 2005-05-16 18:25 edwards * include/formfac/formfac_qsq.h: Moved off to files the def. of operators. 2005-05-16 18:24 edwards * lib/formfac/ff_mom_list.cc: Added cont. Qsq to key of map. Fixed operator< for Array and PiPf. 2005-05-16 18:23 edwards * include/ensem/ensem_scalar_specific.h: Changed return type of calc to a stream. 2005-05-16 18:22 edwards * include/ensem/ensem_obsvector.h: Fixed return type. 2005-05-16 18:22 edwards * include/ensem/ensem_obsscalar.h: Added missing peekObs. 2005-05-15 17:43 edwards * other_libs/xpath_reader/examples/print_xpath.cc: Changed to fall back to Basic xpath reader. 2005-05-13 16:20 kostas * main/fitters/exponaper.h: did nothing... 2005-05-13 15:31 kostas * main/fpi/fpi_db.xml: sample input for fpi 2005-05-13 15:27 kostas * configure, configure.ac, main/fpi/Makefile.am, main/fpi/calc_fpi.cc: added fpi main program 2005-05-13 12:54 kostas * main/fpi/: Makefile.am, calc_fpi.cc: added fpi 2005-05-13 12:46 kostas * include/covfit/FpiParams_io.h, lib/covfit/FpiParams_io.cc: added fpi 2005-05-13 12:41 kostas * include/covfit/FpiParams_io.h: added fpi stuff 2005-05-13 12:38 kostas * lib/: Makefile.am, covfit/FpiParams_io.cc: added fpi stuff 2005-05-13 12:27 kostas * include/: FitParams_io.h, Function.h, covarmat.h, fitter.h, proplist.h, statistics.h: deleted unwanted files 2005-05-13 11:42 kostas * lib/formfac/ff_mom_list.cc: fixed bad sqrt call in line 176 2005-05-11 14:14 edwards * main/formfac/ff.xml.ini: Sample input file. 2005-05-11 14:13 edwards * main/formfac/ff.cc: More testing stuff. Still not quite ready. 2005-05-11 14:13 edwards * lib/formfac/ff_mom_list.cc: Put in some norms. 2005-05-11 14:13 edwards * include/formfac/formfac_qsq.h: Moved around comparisons. 2005-05-09 21:12 tag adat1-13-2 2005-05-09 21:12 edwards * NEWS: Info on 1.13.2 2005-05-09 21:10 edwards * include/formfac/formfac.h, include/formfac/formfac_qsq.h, include/formfac/formfac_util.h, lib/formfac/ff_lsq.cc, lib/formfac/ff_mom_list.cc, lib/formfac/ff_util.cc, main/formfac/ff.cc: First start of ff.cc . Changes in formfac_qsq and lsq. Moved some common code to ff_util.cc. 2005-05-09 21:07 edwards * include/Makefile.am, lib/Makefile.am: Added ff_util.cc and formfac_util.h 2005-05-06 22:01 edwards * lib/formfac/ff_rotate.cc: Original ff.cc code, but decided not to use this method. 2005-05-06 16:44 tag qio2-0-1 2005-05-06 16:44 osborn * other_libs/c-lime/: aclocal.m4, lib/Makefile.am: Fixed problem with VPATH builds (always use += when setting VPATH). 2005-05-06 12:46 tag adat1-13-1 2005-05-06 12:46 edwards * NEWS: Info on 1.13.1 2005-05-06 12:44 edwards * main/formfac/make_mom_list.cc: Test code. 2005-05-06 12:43 edwards * main/formfac/ff.cc: Now has general list manipulation and permutations of moms. 2005-05-06 12:43 edwards * lib/formfac/ff_mom_list.cc: Added mom_list construction 2005-05-06 12:42 edwards * include/formfac/: formfac.h, formfac_qsq.h, formfac_solver.h, formfac_types.h: Moved around formfac defs. New qsq defs. 2005-05-06 12:42 edwards * include/Makefile.am, lib/Makefile.am, main/formfac/Makefile.am: Added qsq formfac codes. 2005-05-05 23:04 edwards * main/formfac/ff.cc: More changes. 2005-05-05 22:41 edwards * main/formfac/ff.cc: Added some momentum control. 2005-05-04 14:59 edwards * include/formfac/formfac_solver.h: Added complex driver 2005-05-04 14:58 edwards * lib/formfac/ff_lsq.cc: Added complex driver code. Added rescaling 2005-05-04 14:58 edwards * include/ensem/ensem_reality.h: Bug fix in operator+ and operator- . Carried over from qdp++. 2005-05-04 14:57 edwards * include/ensem/ensem_ensem.h: Added cmplx code. 2005-05-04 14:57 edwards * main/formfac/ff.cc: Starting version 2005-05-04 14:57 edwards * main/formfac/: Makefile.am, test.cc, test2.cc: Added test2.cc - a driver to test Complex version of LLSQ 2005-05-02 12:48 edwards * include/ensem/: ensem_ensem.h, ensem_obsscalar.h, ensem_obsvector.h, ensem_scalar_specific.h: Added missing peek/poke. Added calc and some missin ops. 2005-05-02 12:47 edwards * aclocal.m4, configure: Induced changes. 2005-05-02 12:46 edwards * main/formfac/test.cc: Test code. 2005-05-02 12:46 edwards * main/ensem/calc.cc, lib/adat_byteorder.cc: Small cleanup 2005-05-02 12:45 edwards * include/Makefile.am, lib/Makefile.am, main/formfac/Makefile.am, include/formfac/formfac.h, include/formfac/formfac_solver.h, include/formfac/formfac_types.h, include/recipes/nr.h, include/recipes/nrtypes.h, include/recipes/nrtypes_nr.h, include/recipes/nrutil.h, include/recipes/nrutil_nr.h, include/recipes/print_array.h, lib/formfac/ff_lsq.cc, lib/recipes/pythag.cc, lib/recipes/svbksb.cc, lib/recipes/svdcmp.cc, lib/recipes/svdfit.cc, lib/recipes/svdvar.cc: Added recipes and formfac codes. 2005-05-02 12:44 edwards * configure.ac: Changed to version 1.13 2005-05-02 12:44 edwards * NEWS: Info on 1.13.0 2005-05-02 12:43 tag adat1-12-2 2005-05-02 12:43 edwards * NEWS: Info on 1.12.2 2005-05-01 21:00 edwards * main/strippers/strip_spectrum.cc: Fixed search for Input/spectrum_w/Param to now look also in Input/Param. 2005-04-29 10:58 tag adat1-12-1 2005-04-29 10:58 edwards * NEWS: Info on 1.12.1 2005-04-29 10:54 edwards * include/ensem/ensem_scalar_specific.h: Added a symmetric tensor. 2005-04-29 10:53 edwards * include/Makefile.am: Removed ensem_multi.h 2005-04-28 15:31 tag c-lime1-2 2005-04-28 15:31 tag qdp1-12-1 2005-04-28 15:31 tag qdp1-12-2 2005-04-28 15:31 edwards * other_libs/c-lime/NEWS: Info on 1.2 2005-04-28 15:29 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2005-04-28 15:28 edwards * other_libs/c-lime/include/lime_config_internal.h.in: Apparently comment changes. 2005-04-28 12:48 detar * other_libs/c-lime/: aclocal.m4, configure, doc/Makefile.am, doc/lime_1p1.tex, doc/lime_1p2.tex, examples/lime_contents.c, examples/lime_extract_record.c, examples/lime_unpack.c, examples/lime_writer_test1.c, include/lime_config_internal.h.in, include/lime_reader.h, include/lime_writer.h, lib/lime_reader.c, lib/lime_writer.c: Significant changes support random access reads and writes More efficient file format conversion Updated documentation 2005-04-28 12:47 detar * other_libs/c-lime/configure.ac: New version number 2005-04-27 22:59 edwards * main/ensem/test2.cc: Test code for contractions and antisym tensor. 2005-04-27 22:57 edwards * main/ensem/: Makefile.am, test.cc: [no log message] 2005-04-27 22:57 edwards * include/ensem/: ensem_ensem.h, ensem_scalar_specific.h: Added contract over fixed number of indices. Added simple/dumb/general antisymmetric tensors. 2005-04-27 22:55 edwards * include/ensem/ensem_multi.h: Removed in favor of XMLArray::Array 2005-04-27 22:55 edwards * include/ensem/ensem_obsantisym.h: Place holder for proper anti-sym tensor tag. 2005-04-27 16:45 edwards * lib/adat_ensbc.cc: Removed adat_ensbc 2005-04-27 16:45 tag adat1-12-0 2005-04-27 16:45 edwards * lib/Makefile.am: Removed adat_ensbc.cc 2005-04-27 16:00 edwards * include/covfit/: FitParams_io.h, Function.h, covarmat.h, fitter.h, proplist.h, statistics.h: Moved from include dir. Overhauled and now in own CovFit namespace. 2005-04-27 15:58 edwards * aclocal.m4, configure: Induced changes. 2005-04-27 15:56 edwards * NEWS: Info on 1.12.0 2005-04-27 15:53 edwards * configure, configure.ac, include/Makefile.am, include/adat.h, include/adat_io.h, include/adat_util.h, include/adat_xmlio.h, include/array_operators.h, include/ensbc.h, include/ensem/ensem.h, include/ensem/ensem_ensem.h, include/ensem/ensem_obsscalar.h, include/ensem/ensem_obstensor.h, include/ensem/ensem_obsvector.h, include/ensem/ensem_primmatrix.h, include/ensem/ensem_primscalar.h, include/ensem/ensem_primseed.h, include/ensem/ensem_primvector.h, include/ensem/ensem_reality.h, include/ensem/ensem_scalar_specific.h, include/ensem/ensem_specializations.h, include/ensem/ensem_stopwatch.h, lib/BaseFitter.cc, lib/CovarMat.cc, lib/FitParams_io.cc, lib/Fitter.cc, lib/Makefile.am, lib/adat_io.cc, lib/adat_xmlio.cc, lib/coFitter.cc, lib/proplist.cc, lib/covfit/BaseFitter.cc, lib/covfit/CovarMat.cc, lib/covfit/FitParams_io.cc, lib/covfit/Fitter.cc, lib/covfit/coFitter.cc, lib/covfit/proplist.cc, main/ensem/calc.cc, main/ensem/test.cc, main/fitters/cofit.cc, main/fitters/covarprop.cc, main/fitters/expon.h, main/fitters/exponaper.h, main/fitters/exponaper_bar.h, main/fitters/exponper.h, main/fitters/fit.cc, main/fitters/polynomium.h, main/fitters/readcovp.cc, main/mres/calc_Za.cc, main/mres/mres.cc, main/mres_calc_exercise/eig_err.cc, main/spectrum/spectrum.cc, main/strippers/Makefile.am, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_buildingblocks.cc, main/strippers/strip_dwfloc.cc, main/strippers/strip_mres.cc, main/strippers/strip_mres4D.cc, main/strippers/strip_mresZa.cc, main/strippers/strip_nCG.cc, main/strippers/strip_spectrum.cc, main/strippers/strip_wallformfac.cc, main/strippers/strippers.h, main/ttt/qqq_props.cc: Completely overhauled include and lib structure. Put all of Kostas' fit stuff into their own covfit subdir in include and lib. All in its own namespace. Similarly, all of ensem is in it's own dirs and namespaces. Unified use of XML Array as base array type. I've not touched TTT which uses someother classes. The new convention should be is people put there little mini packages in their own dirs and namespaces. One can compose a bigger namespace with namespace composition. 2005-04-27 15:50 tag xpath-reader-1-3-0 2005-04-27 15:50 edwards * other_libs/xpath_reader/NEWS: Info on 1.3.0 2005-04-27 15:49 edwards * other_libs/xpath_reader/include/: array.h, array_type.h, attribute.h, document.h, tcomplex.h: Renamed files to have unique xml prefix. 2005-04-27 15:48 edwards * other_libs/xpath_reader/: examples/print_xpath.cc, examples/xpath_reader_test.cc, include/Makefile.am, include/basic_xpath_reader.h, include/xml_array.h, include/xml_array_type.h, include/xml_array_writer.h, include/xml_attribute.h, include/xml_document.h, include/xml_schemawriter.h, include/xml_simpleschemawriter.h, include/xml_simplewriter.h, include/xml_struct_writer.h, include/xml_tcomplex.h, include/xml_writer.h, include/xpath_reader.h, lib/attribute.cc, lib/xml_struct_writer.cc: Renamed files to have unique xml prefix. Put namespaces around Array and TComplex. 2005-04-27 15:46 tag adat1-11-1 2005-04-27 15:46 edwards * NEWS: Info on 1.11.2 2005-04-27 11:05 tag xpath-reader-1-2-3 2005-04-27 11:05 edwards * other_libs/xpath_reader/NEWS: Info on 1.2.3. 2005-04-27 05:28 tag qio1-1-6 2005-04-27 05:28 bjoo * other_libs/c-lime/include/Makefile.am: Added lime-config-internal.h.in to EXTRA_DIST 2005-04-27 05:20 bjoo * other_libs/c-lime/include/Makefile.am: Fixed including of lime_config_internal.h in dist 2005-04-26 21:38 edwards * main/ensem/: calc.cc, test.cc: Fixes. 2005-04-26 21:37 edwards * include/ensem/: ensem_ensem.h, ensem_io.h, ensem_newops.h, ensem_obsscalar.h, ensem_obstensor.h, ensem_obsvector.h, ensem_reality.h, ensem_scalar_specific.h: Changed IO. Now, ensbc output goes through TextReader/Writer. 2005-04-26 21:36 edwards * lib/: Makefile.am, ensem/ensem_io.cc: Added ensem_io.cc 2005-04-25 23:55 tag adat1-11-0 2005-04-25 23:55 edwards * NEWS: Info on 1.11.0 2005-04-25 23:54 edwards * configure: Induced changes. 2005-04-25 23:53 edwards * include/ensem/: ensem_ensem.h, ensem_obstensor.h, ensem_scalarsite_defs.h: Fixes. 2005-04-25 23:53 edwards * main/ensem/: calc.cc, test.cc: More fixes. 2005-04-25 23:44 edwards * main/ensem/: Makefile.am, calc.cc, test.cc: First version 2005-04-25 23:38 edwards * configure: Induced changes. 2005-04-25 23:38 edwards * configure.ac: Update to version 1.11. Added configure of main/ensem/Makefile 2005-04-25 23:36 edwards * lib/Makefile.am: Added ensem/ensem_random.cc 2005-04-25 23:34 edwards * include/ensem/ensem.h, include/ensem/ensem_ensem.h, include/ensem/ensem_forward.h, include/ensem/ensem_io.h, include/ensem/ensem_multi.h, include/ensem/ensem_newops.h, include/ensem/ensem_observable.h, include/ensem/ensem_obsmatrix.h, include/ensem/ensem_obsscalar.h, include/ensem/ensem_obstensor.h, include/ensem/ensem_obsvector.h, include/ensem/ensem_operator_tags.h, include/ensem/ensem_params.h, include/ensem/ensem_precision.h, include/ensem/ensem_primgamma.h, include/ensem/ensem_primitive.h, include/ensem/ensem_primmatrix.h, include/ensem/ensem_primscalar.h, include/ensem/ensem_primseed.h, include/ensem/ensem_primspinmat.h, include/ensem/ensem_primspinvec.h, include/ensem/ensem_primvector.h, include/ensem/ensem_random.h, include/ensem/ensem_reality.h, include/ensem/ensem_scalar_specific.h, include/ensem/ensem_scalarsite_defs.h, include/ensem/ensem_simpleword.h, include/ensem/ensem_specializations.h, include/ensem/ensem_stopwatch.h, include/ensem/ensem_traits.h, include/ensem/ensem_type_computations.h, lib/ensem/ensem_random.cc: First version 2005-04-19 12:44 edwards * other_libs/c-lime/examples/Makefile.am: Moved programs to bin_PROGRAMS 2005-04-19 12:43 edwards * other_libs/: xpath_reader/aclocal.m4, xpath_reader/configure, c-lime/aclocal.m4, c-lime/configure: Induced changes. 2005-04-19 12:43 edwards * other_libs/xpath_reader/examples/Makefile.am: Make new print_xpath a bin_PROGRAMS 2005-04-19 12:42 edwards * other_libs/xpath_reader/examples/print_xpath.cc: Simple program to print xpath's 2005-04-01 10:48 bjoo * main/mres_calc_exercise/: DATA, eigHwM1.8.0656.xml: Added test data 2005-04-01 10:43 bjoo * configure, configure.ac: Added calculator exercise 2005-04-01 10:43 bjoo * main/mres_calc_exercise/: DATA, Makefile.am, eig_err.cc, zolotarev.h, zolotarev_coeffs.cc: Added mres_calculator exercise 2005-03-29 08:26 bjoo * other_libs/xpath_reader/: include/attribute.h, lib/xml_simplewriter.cc: Removed using namespace std from simplewriter and headers in some places as it conflicted with something on a sun. Replaced with suitable std:: prefixes 2005-03-27 13:07 edwards * main/strippers/strip_buildingblocks.cc: Small tweak. Added debugging output. 2005-03-12 14:07 edwards * main/strippers/strip_buildingblocks.cc: Added include assert.h 2005-03-12 13:58 tag adat1-10-0 2005-03-12 13:58 edwards * NEWS: Info on 1.10.0 2005-03-12 13:26 edwards * main/strippers/strip_buildingblocks.cc: Fixed usage string. 2005-03-12 13:25 edwards * main/strippers/strip_buildingblocks.cc: Added reading of a prefix. 2005-03-11 15:42 edwards * main/strippers/: Makefile.am, strip_buildingblocks.cc: Added strip_buildingblocks.cc 2005-03-10 11:35 tag adat1-9-1 2005-03-10 11:35 edwards * NEWS: Info on 1.9.1 2005-03-10 11:32 edwards * aclocal.m4, configure: Induced changes. 2005-03-10 11:31 edwards * main/Makefile.am: Removed all dirs from a default build. Now, users must walk into each one to build them. 2005-03-09 19:58 bjoo * main/strippers/strip_nCG.cc: Oops 2005-03-09 15:39 edwards * lib/Makefile.am: Removed unused VPATH. 2005-03-08 09:06 dgr * main/ttt/Makefile.am: Fixed Makefile.am 2005-03-08 08:52 dgr * main/ttt/qqq_props.cc: Fixed bug in xml reader part of qqq_props 2005-03-07 20:45 tag adat1-9-0 2005-03-07 20:45 edwards * NEWS: Info on 1.9.0 2005-03-07 20:44 edwards * main/strippers/strip_spectrum.cc: Added support for printing hybrid mesons. 2005-03-07 06:11 bjoo * main/strippers/strip_nCG.cc: Makefile.am 2005-03-06 22:46 tag adat1-8-0 2005-03-06 22:46 edwards * NEWS: Info on 1.8.0 2005-03-06 21:43 edwards * main/strippers/strip_bar3ptfn.cc: Updated to new bar3ptfn format. Finally, expunged all the magic numbers. 2005-03-04 10:03 kostas * main/fitters/fitfunctions.h: added anti-periodic exponentials 2005-03-04 10:02 kostas * main/fitters/: exponaper.h, exponper.h: [no log message] 2005-03-03 17:33 dgr * configure, configure.ac: Added ttt 2005-03-01 13:04 dgr * main/ttt/: qqq_props.cc, qqq_props.h, ttt.cc: Minor changes, like passing the directory root... 2005-02-28 11:46 tag pre-qdp1-12-0 2005-02-28 11:46 tag qdp1-12-0 2005-02-28 11:46 bjoo * other_libs/: c-lime/include/lime_defs.h, xpath_reader/include/array.h, xpath_reader/include/basic_xpath_reader.h, xpath_reader/include/xml_array_writer.h, xpath_reader/include/xml_struct_writer.h, xpath_reader/lib/xml_struct_writer.cc: t_qio now much more stable on QCDOC after QIO string handling fixes 2005-02-18 13:12 tag adat1-7-0 2005-02-18 13:12 edwards * NEWS: Info on 1.7.0 2005-02-18 13:12 edwards * main/strippers/strip_spectrum.cc: Added version 11 reading. Haven't yet put in hybrids, though. Cleaned up try/throw/catch. 2005-02-18 13:11 tag adat1-6-1 2005-02-18 13:11 edwards * NEWS: Info on 1.6.1 2005-02-16 10:09 dgr * main/ttt/: arrays.h, compute_corrs.cc: Changed code to output real and imaginary pieces in separate files 2005-02-15 13:15 dgr * main/: Makefile.am, baryons/compute_corrs.cc, baryons/qqq_prop.cc, baryons/read_qqq_prop.cc, baryons/ttt.cc, ttt/Makefile.am, ttt/arrays.h, ttt/compute_corrs.cc, ttt/compute_corrs.h, ttt/corr_info.cc, ttt/corr_info.h, ttt/iohelp.cc, ttt/iohelp.h, ttt/qqq_props.cc, ttt/qqq_props.h, ttt/test_corr_info.cc, ttt/test_qqq_props.cc, ttt/ttt.cc: A rewrite of the baryon analysis code, with all the routines now contained in "ttt", for "Tie Them Together" 2005-02-15 12:54 edwards * main/strippers/strip_spectrum.cc: Changed reader to first look for Mass_mes. If not there, then will look in ChromaProp header for Mass. 2005-02-10 22:11 kostas * include/adat_util.h: added a block data utility 2005-02-04 13:44 tag qdp1-11-8 2005-02-04 13:44 dgr * aclocal.m4, configure, main/baryon_analysis/qqq_io.cc, main/baryons/compute_corrs.cc, main/baryons/qqq_prop.cc, main/baryons/qqq_prop.h, main/baryons/read_qqq_prop.cc, main/baryons/ttt.cc, other_libs/c-lime/aclocal.m4, other_libs/c-lime/configure, other_libs/xpath_reader/aclocal.m4, other_libs/xpath_reader/configure: Updated baryons code - still some problems with file I/O 2005-02-02 17:01 kostas * main/fitters/exponaper_bar.h: yet an other fix 2005-02-02 15:28 kostas * main/fitters/exponaper_bar.h: fixed bag 2005-02-02 15:27 kostas * main/fitters/exponaper_bar.h: fixed baryon fit function 2005-01-29 23:34 detar * other_libs/c-lime/examples/lime_reader_test1.c: Fix errors in examples/Makefile.am 2005-01-26 09:21 tag ante-IO-dox 2005-01-26 09:21 tag qdp1-11-4 2005-01-26 09:21 tag qdp1-11-5 2005-01-26 09:21 tag qdp1-11-6 2005-01-26 09:21 tag qdp1-11-7 2005-01-26 09:21 zbigniew * other_libs/c-lime/include/lime_config.h: Changed the redefinitions of the macros generated by autoconf. Previously, the macro redefinitions didn't work, so now this info is stored in C-strings. 2005-01-22 08:21 tag qdp1-11-2 2005-01-22 08:21 tag qdp1-11-3 2005-01-22 08:21 bjoo * other_libs/xpath_reader/: aclocal.m4, configure: Hopefully makefiles are all in order 2005-01-22 06:32 bjoo * other_libs/c-lime/include/lime_fixed_types.h: Autoconfiscated uint_t type checking 2005-01-22 06:21 bjoo * other_libs/c-lime/: include/lime_fseeko.h, lib/lime_utils.c: Fixed a bug in lime_fseeko.h 2005-01-22 05:51 bjoo * other_libs/c-lime/: configure, configure.ac, include/Makefile.am, include/lime_config_internal.h.in, include/lime_fixed_types.h, include/lime_fseeko.h, lib/Makefile.am, lib/lime_fseeko.c, lib/lime_reader.c, lib/lime_writer.c: Added fseeko stubs for qcdoc. Made the type checking system more sophisticated. Untested on QCDOC as yet 2005-01-19 22:03 edwards * other_libs/c-lime/: configure: Induced changes. 2005-01-07 01:04 tag c-lime1-1-new 2005-01-07 01:04 tag qio1-1-5 2005-01-07 01:04 edwards * other_libs/c-lime/NEWS: Info on 1.1 2005-01-07 01:02 tag c-lime1-1 2005-01-07 01:02 edwards * other_libs/c-lime/: README, doc/README, doc/lime_1p1.tex, examples/lime_contents.c, examples/lime_extract_record.c, examples/lime_pack.c, examples/lime_unpack.c, examples/lime_writer_test1.c, include/lime_defs.h, include/lime_header.h, include/lime_reader.h, include/lime_writer.h, lib/lime_header.c, lib/lime_reader.c, lib/lime_writer.c: Add a variety of LIME utilities Add LIME documentation Change LIME file byte counter types to off_t and change QIO/LRL to conform Update QIO documentation A little housekeeping 2005-01-07 01:02 edwards * other_libs/c-lime/configure: Induced changes. 2005-01-07 00:59 edwards * other_libs/c-lime/examples/Makefile.am: Added more test files. 2005-01-07 00:59 edwards * other_libs/c-lime/doc/Makefile.am: First version 2005-01-07 00:57 edwards * other_libs/c-lime/Makefile.am: Added doc to SUBDIRS 2005-01-07 00:56 edwards * other_libs/c-lime/: aclocal.m4: Induced changes. 2005-01-07 00:56 edwards * other_libs/c-lime/configure.ac: Changed to version 1.1 . Added configure of doc/Makefile 2004-12-21 22:59 edwards * main/strippers/strip_mres4D.cc: Can now process t_mres_4d.cc or mres.cc files. 2004-12-17 16:55 tag pre_qio1-1-5 2004-12-17 16:55 tag qio1-1-4 2004-12-17 16:55 osborn * other_libs/c-lime/: configure, include/lime_config_internal.h.in, include/lime_fixed_types.h: Made sure qio_config.h and lime_config.h are included where stdint.h is used. 2004-12-17 16:40 osborn * other_libs/c-lime/configure.ac: Fixed c-lime configure.ac to check for stdint.h. 2004-12-16 19:40 osborn * other_libs/c-lime/: aclocal.m4, configure: Made DML_grid_route more efficient. 2004-12-09 08:18 tag bj_QIO_fixes 2004-12-09 08:18 bjoo * other_libs/xpath_reader/: aclocal.m4, configure: Added some const cast-aways in qdp_parscalar_layout.cc to make QCDOC compilation happy. Added QCDOC installation instructions 2004-12-08 22:50 edwards * main/strippers/strip_mres4D.cc: Changed to read "mres" primary tag - from the chroma/mainprogs/main/mres.cc program. Fixed some header output. 2004-12-08 22:11 edwards * main/strippers/Makefile.am: Added strip_mres4D.cc 2004-12-08 22:11 edwards * main/strippers/strip_mres4D.cc: Another mres code. 2004-11-30 14:58 osborn * other_libs/c-lime/: aclocal.m4, configure: Minor fixes. 2004-11-30 14:52 osborn * other_libs/c-lime/include/lime_fixed_types.h: Attempt to fix int types to work on QCDOC. May need better fix later. 2004-11-21 23:09 tag qdp1-11-0 2004-11-21 23:09 edwards * other_libs/xpath_reader/configure.ac: Changed to version 1.3 2004-11-21 23:09 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2004-11-21 23:08 edwards * other_libs/xpath_reader/: include/Makefile.am, lib/Makefile.am: Removed VPATH's and explicit dependencies on .h files. Now make distcheck works. 2004-11-19 18:59 kostas * main/mres/: calc_Za.cc, mres.cc: fixed calc_Za 2004-11-19 17:01 dgr * main/baryons/: compute_corrs.cc, compute_corrs.h: Added a couple of missing files 2004-11-19 16:52 dgr * main/baryons/: Makefile.am, baryons.cc, baryons_new.cc, globals.h, qqq_prop.cc, qqq_prop.h, read_qqq_prop.cc, ttt.cc: A major re-write of the code so as to conform to Colin's new formats for the group-theory input files. Still very much "work-in-progress" and not debugged 2004-11-15 17:54 edwards * main/strippers/strip_mres.cc: Comment change. 2004-11-09 23:01 edwards * main/strippers/strip_mres.cc: Changed pseudo and midpoint to return sum over time. 2004-11-09 22:52 edwards * main/strippers/: Makefile.am, strip_mres.cc: Added strip_mres - doesn't look for axial/vector currents. 2004-11-02 14:31 tag qdp1-10-6 2004-11-02 14:31 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-11-01 19:49 osborn * other_libs/c-lime/include/Makefile.am: Don't install c-lime's lime_config.h and lime_config_internal.h. 2004-11-01 19:26 osborn * other_libs/c-lime/: aclocal.m4, configure: Added missing files in examples, created qio-configure, other build fixes. 2004-11-01 14:05 dgr * main/baryons/: Makefile.am, baryons_new.cc, qqq_prop.cc: Removed baryons.cc from the default compilation tree Several incomplete addtions to baryons_new 2004-11-01 12:58 tag c-lime1-1-0 2004-11-01 12:58 edwards * other_libs/c-lime/NEWS: Info on 1.1.0 2004-11-01 12:50 tag qio1-1-beta2 2004-11-01 12:50 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-11-01 12:40 tag xpath-reader-1-2-2 2004-11-01 12:40 edwards * other_libs/xpath_reader/include/basic_xpath_reader.h: Switched from direct write of strings to write of char* in internal primitive debug. 2004-10-29 23:12 detar * other_libs/c-lime/: examples/lime_reader_test1.c, examples/lime_writer_test1.c, include/lime_reader.h, lib/lime_reader.c: Support host file conversion from singlefile to partfile. Revision to example test code. Verbosity level added. -CD 2004-10-21 17:22 kostas * main/spectrum/param_db.xml: add sample input for the spectrum 2004-10-21 17:21 kostas * main/spectrum/spectrum.cc: fixed the spectrum main program 2004-10-21 17:12 kostas * main/: mres/mres.cc, strippers/strip_mresZa.cc: fixed stripper to read several output versions 2004-10-18 15:35 tag c-lime1-0-0 2004-10-18 15:35 tag qdp1-10-2 2004-10-18 15:35 tag qdp1-10-3 2004-10-18 15:35 tag qdp1-10-4 2004-10-18 15:35 tag qdp1-10-5 2004-10-18 15:35 tag qio1-0-beta4 2004-10-18 15:35 tag qio1-0-beta5 2004-10-18 15:35 edwards * other_libs/c-lime/NEWS: Info on 1.0.0 2004-10-18 15:29 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-10-18 15:28 edwards * other_libs/c-lime/include/Makefile.am: Added hooks for lime_config files. 2004-10-18 15:25 edwards * other_libs/c-lime/include/lime_config_internal.h.in: New header file. 2004-10-18 15:25 edwards * other_libs/c-lime/include/lime_config.h: New config file. 2004-10-18 15:24 edwards * other_libs/c-lime/configure.ac: Added config headers. 2004-10-18 15:16 edwards * other_libs/c-lime/configure.ac: Added config header info. 2004-10-18 14:57 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-10-18 14:16 kostas * include/FitParams_io.h, lib/FitParams_io.cc: converted the particle database to an xmlarray 2004-10-16 14:13 osborn * other_libs/c-lime/examples/lime_writer_test1.c: Fixed distcheck target. 2004-10-16 13:17 osborn * other_libs/c-lime/: aclocal.m4, configure: Made configure use the QMP CC if known unless CC is explicitly specified. Also fixed typo on examples/Makefile.am. 2004-10-14 10:37 edwards * other_libs/c-lime/configure: Induced changes. 2004-09-26 15:23 kostas * aclocal.m4, configure, main/fitters/exponaper_bar.h, main/fitters/exponper.h, main/fitters/fitfunctions.h: added antiperiodic exponential fit for baryons (not sure if it works) 2004-09-14 00:17 edwards * include/adat_xmlio.h: Added printing array name in case of exception. 2004-09-06 11:48 tag adat1-6-0 2004-09-06 11:48 edwards * NEWS: Info on 1.6.0 2004-09-06 11:47 edwards * main/strippers/strip_wallformfac.cc: Now supports version 4 output. 2004-09-06 11:46 tag adat1-5-0 2004-09-06 11:46 edwards * NEWS: Info on 1.5.0 2004-09-01 08:54 tag pre_qdp1-10-0 2004-09-01 08:54 tag qdp1-10-0 2004-09-01 08:54 tag qdp1-10-1 2004-09-01 08:54 tag qio1-0-beta3 2004-09-01 08:54 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-08-31 19:48 tag qio1-0-beta2 2004-08-31 19:48 osborn * other_libs/c-lime/: aclocal.m4, configure: Removed ':' from path in AC_PATH_PROG in configure.ac 2004-08-26 17:34 tag qio1-0-beta 2004-08-26 17:34 detar * other_libs/c-lime/acinclude.m4: support change of QMP_io_master_node to function -CD 2004-08-26 15:02 detar * other_libs/c-lime/: include/lime_fixed_types.h, include/lime_reader.h, include/lime_writer.h, lib/lime_reader.c, lib/lime_utils.c, lib/lime_writer.c: Added partitioned I/O support. Made string functionality same as QDP. Standardized fixed numeric types. No support for parallel I/O or file appending yet, but included placeholders. -CD 2004-07-30 11:01 dgr * main/baryons/: Makefile.am, baryons_new.cc, qqq_prop.cc, qqq_prop.h, read_qqq_prop.cc: Changed code to read in Colin's new qqq_prop input file 2004-06-25 16:45 dgr * main/baryons/: baryons.cc, qqq_prop.cc, read_qqq_prop.cc: Added modified routine for reading in generalised propagators Corrected a couple of bugs in qqq_prop 2004-06-18 17:39 dgr * main/baryons/: Makefile.am, baryons.cc, qqq_prop.cc, read_qqq_prop.cc, read_qqq_prop.h: First pass at reading qqq files..... 2004-06-17 18:35 colin * main/baryons/: baryons.cc, correlate.cc, iohelp.cc, qqq_prop.cc, arrays.h, correlate.h, globals.h, iohelp.h, qqq_prop.h: first pass done 2004-06-17 11:19 colin * main/baryons/correlate.h: minor changes 2004-06-17 11:13 colin * main/baryons/Makefile.am: fff 2004-06-17 11:13 colin * main/baryons/: correlate.cc, elemental_ops.cc, projections.cc, qqq_prop.cc, correlate.h, elemental_ops.h, projections.h, qqq_prop.h: updated 2004-06-16 17:49 colin * main/baryons/: Makefile.am, baryons.cc, qqq_prop.cc, qqq_prop.h: updated qqq_prop, automake, autoconf 2004-06-16 17:27 colin * main/baryons/: baryons.cc, globals.h, in.dat, iohelp.cc, iohelp.h, projections.cc, projections.h, qqq_prop.cc, qqq_prop.h: addition of qqq_prop 2004-06-16 11:29 colin * main/baryons/: baryons.cc, in.dat: added input file 2004-06-16 10:53 colin * main/baryons/baryons.cc: updated to include nucleons 2004-06-15 18:20 colin * main/baryons/: arrays.h, elemental_ops.cc, elemental_ops.h, iohelp.cc, iohelp.h, projections.cc, projections.h: added new files 2004-06-15 17:31 colin * main/baryons/Makefile.am: added some more files 2004-06-15 17:04 colin * main/baryons/baryons.cc: first amazing version 2004-06-15 16:45 edwards * configure: Induced changes 2004-06-15 16:42 edwards * main/Makefile.am: Added baryons. 2004-06-15 16:40 edwards * configure.ac: Added configure of baryons maindir. 2004-06-15 16:37 edwards * main/baryons/Makefile.am: First version. 2004-06-12 15:32 edwards * main/strippers/strip_wallformfac.cc: Still fixing the number of files, etc. 2004-06-12 15:20 edwards * main/strippers/strip_wallformfac.cc: Usage info change. 2004-06-12 15:18 edwards * main/strippers/strip_wallformfac.cc: Bug fix again on file names. 2004-06-12 15:15 edwards * main/strippers/strip_wallformfac.cc: Bug fix. Printed first file twice. 2004-06-12 15:01 edwards * main/strippers/strip_wallformfac.cc: Added option to select the form-factor. 2004-06-12 14:41 edwards * main/strippers/strip_wallformfac.cc: Added printing of file name. 2004-06-08 16:58 tag adat1-4-4 2004-06-08 16:58 edwards * NEWS: Info on 1.4.4. 2004-06-08 16:54 edwards * main/strippers/strip_wallformfac.cc: Changed to now read binary input. 2004-06-08 11:23 tag adat1-4-3 2004-06-08 11:23 edwards * NEWS: Info on 1.4.3 2004-06-08 11:12 edwards * main/strippers/strip_spectrum.cc: Updated to also support output version 11. Compared to version 10, now new delta_{x,y,z} operators are also printed. 2004-06-06 17:41 edwards * main/strippers/strip_wallformfac.cc: New stripper version. Requires v2 input and v3 output. 2004-06-05 17:04 tag adat1-4-2 2004-06-05 17:04 edwards * NEWS: Info on 1.4.2 2004-05-27 18:43 edwards * aclocal.m4, configure: Induced changes. 2004-05-20 13:55 kostas * lib/coFitter.cc: fixed bug in stdout printing 2004-05-20 13:33 kostas * include/fitter.h: fixed params set through FitterArgs 2004-05-20 12:33 kostas * include/FitParams_io.h, lib/FitParams_io.cc: cvs tags 2004-05-20 12:32 kostas * include/FitParams_io.h, include/fitter.h, lib/BaseFitter.cc, lib/FitParams_io.cc, lib/Fitter.cc, lib/Makefile.am, lib/coFitter.cc: improved the interface to the fitters and added xml parsing stuff for spectrum calculations 2004-05-19 18:30 kostas * include/covarmat.h: fixed yet another bug 2004-05-19 18:11 kostas * lib/CovarMat.cc: fixed another bug 2004-05-19 17:53 kostas * include/covarmat.h, lib/CovarMat.cc: fixed bug 2004-05-19 17:41 kostas * aclocal.m4, configure, include/covarmat.h, lib/CovarMat.cc: added some Arrays in CovarMat 2004-05-13 22:20 edwards * main/baryon_analysis/baryon_analysis.cc: Added some reading of the header - for now pull out Dirac_basis type. 2004-05-13 21:43 edwards * main/baryon_analysis/Makefile.am: Promoted baryon_analysis to noinst_PROGRAMS. 2004-05-11 16:23 tag c-lime0-9-0 2004-05-11 16:23 tag qdp1-8-5 2004-05-11 16:23 tag qdp1-8-6 2004-05-11 16:23 tag qdp1-9-0 2004-05-11 16:23 tag qdp1-9-1 2004-05-11 16:23 tag qdp1-9-2 2004-05-11 16:23 tag qdp1-9-3 2004-05-11 16:23 tag qdp1-9-4 2004-05-11 16:23 tag qio0_9_6 2004-05-11 16:23 edwards * other_libs/c-lime/NEWS: Info on 0.9.0 2004-05-11 16:21 tag adat1-4-1 2004-05-11 16:21 edwards * NEWS: Info on 1.4.1 2004-05-11 10:39 edwards * configure: Induced changes. 2004-05-11 10:38 edwards * main/baryon_analysis/Makefile.am: Changed qio to c-lime. 2004-05-11 10:37 edwards * other_libs/Makefile.am: Changed subdir of qio to c-lime. 2004-05-11 10:37 edwards * configure.ac: Changed configure of qio to configure of c-lime. 2004-05-11 00:09 edwards * main/baryon_analysis/qqq_io.cc: Commented out some debugging output. 2004-05-11 00:03 edwards * main/baryon_analysis/: baryon_analysis.cc, baryon_functions.h, baryons.h, qqq_io.cc: Changed to support LIME reading of barcomp file. Temporarily, the header is tossed out. 2004-05-10 20:47 edwards * configure: Induced changes. 2004-05-10 20:46 edwards * main/baryon_analysis/Makefile.am: Added include and libs of lime. Do not need qio. 2004-05-10 20:41 edwards * main/baryon_analysis/Makefile.am: Promoted baryon_analysis to a check program. 2004-05-10 20:38 edwards * configure.ac: Added configure of qio. 2004-05-10 20:37 edwards * other_libs/Makefile.am: Added qio. 2004-05-10 20:24 tag adat1-4-0 2004-05-10 20:24 edwards * aclocal.m4, configure: Induced changes. 2004-05-10 20:20 edwards * NEWS: Version 1.4 . 2004-05-10 20:20 edwards * configure.ac: Changed to version 1.4 . 2004-05-10 20:18 edwards * main/baryon_analysis/: compute_group_corrs.cc, ops.h, read_group_tables.cc: This code violated the definition/declaration model - there were includes of the same DEFINITION of an object. Hence, the linker would fail. Had to comment out defs in ops.h and move the definition into the read code and the externs into the compute code. Now all links. 2004-05-10 20:16 edwards * main/baryon_analysis/Makefile.am: Took UKQCD code out of compilation. 2004-05-10 18:50 edwards * main/baryon_analysis/: allocate.cc, baryon_analysis.cc, compute_group_corrs.cc, read_group_tables.cc: Compiles, but doesn't link. 2004-05-10 18:16 edwards * configure, main/Makefile.am: Induced changes. 2004-05-10 18:16 edwards * configure.ac: Added baryon_analysis 2004-05-10 18:15 edwards * main/baryon_analysis/: Makefile.am, allocate.cc, baryon_analysis.cc, baryon_functions.h, baryons.h, compute_group_corrs.cc, compute_ukqcd_corrs.cc, gamma.cc, gamma.h, ops.h, qqq_io.cc, read_group_tables.cc, strip_io.cc, swap.cc: First version. Just an import from the baryon_analysis module. Changed all C files to .CC to start a conversion to C++! 2004-05-10 18:02 edwards * main/baryon_analysis/Makefile.am: Place holder. 2004-05-05 17:03 edwards * main/strippers/strip_wallformfac.cc: Added diagnostic output to stdout. 2004-05-05 16:22 edwards * main/strippers/strip_spectrum.cc: Changed where print statement for filename is printed. 2004-05-05 11:36 edwards * main/strippers/strip_bar3ptfn.cc: Added the filename to the print config line (stdout) for info purposes. 2004-05-05 11:34 edwards * main/strippers/strip_spectrum.cc: Added filename to the print line for info purposes. 2004-05-05 10:37 tag qdp1-8-4 2004-05-05 10:37 bjoo * other_libs/xpath_reader/include/: xml_array_writer.h, xml_simplewriter.h, xml_struct_writer.h: Eliminated GCC warnings that arose with the \-Wall option, except in QIO... 2004-04-29 17:06 kostas * main/fitters/: exponper.h, fitfunctions.h: Added periodic exponetials 2004-04-28 11:07 edwards * main/strippers/strip_wallformfac.cc: New file format. 2004-04-28 11:03 edwards * main/strippers/Makefile.am: Moved strip_wallformfac from EXTRA to noinst programs 2004-04-27 23:06 edwards * main/strippers/strip_spectrum.cc: Added version 6 chromaprop reader support. 2004-04-27 15:29 tag qdp1-8-2 2004-04-27 15:29 tag qdp1-8-3 2004-04-27 15:29 tag xpath-reader-1-2-1 2004-04-27 15:29 edwards * other_libs/xpath_reader/NEWS: Info. 2004-04-27 07:22 bjoo * other_libs/xpath_reader/: examples/Makefile.am, examples/basic_xpath_reader_test3.cc, examples/edwards.xml, include/basic_xpath_reader.h, lib/basic_xpath_reader.cc: Added features for Robert 2004-04-20 09:41 bjoo * main/strippers/strip_spectrum.cc: Added version 5 of prop_header where Mass is in the FermionAction subtag 2004-04-18 23:21 edwards * main/strippers/strip_wallformfac.cc: Fixed output filenames. 2004-04-18 21:57 edwards * main/strippers/strip_wallformfac.cc: Updated for version 2 output of wallformfac. 2004-04-07 00:36 edwards * main/strippers/strip_wallformfac.cc: Working first version. 2004-04-06 22:40 edwards * main/strippers/strip_wallformfac.cc: First version. 2004-04-06 22:39 edwards * main/strippers/Makefile.am: Added strip_wallformfac 2004-04-06 22:29 edwards * aclocal.m4, configure: Induced changes. 2004-04-05 21:20 tag qdp1-8-1 2004-04-05 21:20 tag qio0-9-5 2004-04-05 21:20 edwards * other_libs/c-lime/examples/lime_extract_record.c: Added record increment. 2004-04-05 20:59 edwards * other_libs/c-lime/examples/lime_extract_record.c: New program. 2004-04-05 20:58 edwards * other_libs/c-lime/examples/Makefile.am: Added lime_extract_record 2004-04-05 15:04 edwards * AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, acinclude.m4, aclocal.m4, configure, configure.ac: Induced changes. 2004-04-05 13:44 edwards * aclocal.m4, AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, acinclude.m4, configure, configure.ac: Induced changes. 2004-04-05 13:43 edwards * main/strippers/strip_spectrum.cc: In version 10, now supports Wall sources/sinks. 2004-04-05 12:24 edwards * main/strippers/strip_spectrum.cc: Changed to support version 9 and 10. Eliminated need to read j_decay from Param group. Now gets the info from the PropSource. 2004-03-19 23:13 tag qdp1-7-8 2004-03-19 23:13 tag qdp1-7-9 2004-03-19 23:13 tag qdp1-8-0 2004-03-19 23:13 tag qio0-9-4 2004-03-19 23:13 edwards * other_libs/c-lime/configure: Induced changes. 2004-03-18 09:55 kostas * main/fitters/expon.h: fixed bug 2004-03-17 18:34 kostas * main/fitters/: Makefile.am, cofit.cc, expon.h: small fix bugs 2004-03-17 17:30 kostas * main/fitters/: Makefile.am, expon.h, fit.cc, fitfunctions.h, polyfit.cc, polynomium.h: modified how to compile fitfunctions 2004-03-17 11:29 kostas * aclocal.m4, configure, main/mres/calc_Za.cc, main/strippers/Makefile.am, main/strippers/strip_dwfloc.cc: Za calculation; dwf locality stripper 2004-03-15 15:41 tag qdp1-7-7 2004-03-15 15:41 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-03-12 11:29 kostas * main/mres/: Makefile.am, calc_Za.cc: Za calculation 2004-03-11 12:58 kostas * main/strippers/strip_mresZa.cc: changed param to Param 2004-03-10 23:54 tag pre_qdp1-7-7 2004-03-10 23:54 tag qdp1-7-6 2004-03-10 23:54 tag qio0-9-3 2004-03-10 23:54 detar * other_libs/c-lime/: aclocal.m4, configure, include/Makefile.am: Correct multifile lime header bug. 2004-03-08 15:54 edwards * other_libs/c-lime/configure: Induced changes. 2004-03-08 15:18 edwards * other_libs/c-lime/aclocal.m4: Induced changes. 2004-03-08 15:18 edwards * other_libs/c-lime/: Makefile.am, examples/Makefile.am: Added examples generation. 2004-03-08 15:18 edwards * other_libs/c-lime/configure.ac: Added generation of examples. 2004-03-07 17:44 detar * other_libs/c-lime/examples/: lime_reader_test1.c, lime_writer_test1.c: Converted dime test utilities to lime. lime_reader_test1 can also be used to dump a file. 2004-03-06 16:26 tag qdp1-7-5 2004-03-06 16:26 tag qio0-9-2 2004-03-06 16:26 detar * other_libs/c-lime/: include/lime_defs.h, lib/lime_header.c, lib/lime_reader.c: Added reads and writes for global data. Added reads and writes for arrays of fields. Renamed XML_String type QIO_String. Renamed XML_string.c QIO_string.c and moved it from xml to qio. Corrected bug that suppressed the lime header in secondary multifile data records 2004-03-02 20:17 edwards * main/strippers/strip_spectrum.cc: Fixed to support point sources. 2004-03-02 17:49 edwards * aclocal.m4, configure: Induced changes. 2004-02-29 20:33 tag qdp1-7-4 2004-02-29 20:33 edwards * other_libs/c-lime/lib/: lime_reader.c, lime_writer.c: Changed DEBUG to LIME_DEBUG to avoid name collisions. Commented out limeCloseRecord debugging comment. 2004-02-29 18:14 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-02-28 16:14 tag qdp1-7-3 2004-02-28 16:14 tag qio0-9-1 2004-02-28 16:14 edwards * other_libs/c-lime/configure: Induced changes. 2004-02-28 16:12 edwards * other_libs/c-lime/aclocal.m4: Induced changes 2004-02-28 13:07 detar * other_libs/c-lime/: aclocal.m4, configure: Correct record_info mem leak. Remove (size_t)(-1). 2004-02-26 17:42 tag qcd1-7-2 2004-02-26 17:42 tag qio0-9-0 2004-02-26 17:42 edwards * other_libs/c-lime/lib/: lime_reader.c, lime_writer.c: Fixed some casts. 2004-02-26 17:34 edwards * other_libs/c-lime/include/lime_binary_header.h: Changed type of lime_hdr_rec_type to unsigned char*. 2004-02-26 15:39 kostas * aclocal.m4, configure, include/fitter.h, lib/BaseFitter.cc, lib/Fitter.cc: added functionality to the fitters so that they can be called fro c++ programs 2004-02-26 15:38 kostas * main/mres/mres.cc: added jackknifed mres calculation 2004-02-26 15:37 kostas * main/fitters/: Makefile.am, fit.cc, polynomium.h: fixed problems with automake 2004-02-24 17:04 dru * main/BuildingBlocks/readme: [no log message] 2004-02-22 23:42 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2004-02-22 21:42 tag adat1-3-0 2004-02-22 21:42 edwards * main/strippers/: strip_bar3ptfn.cc, strip_spectrum.cc: New support for propagator driven XML input/output in Chroma. 2004-02-22 21:41 edwards * NEWS: Info on 1.3.0 2004-02-22 21:38 tag adat1-2-1 2004-02-22 21:38 edwards * NEWS: Info on 1.2.1 2004-02-22 21:36 edwards * aclocal.m4, configure: Induced changes. 2004-02-22 21:35 edwards * main/fitters/: Makefile.am, polynomium.h: Fix ups. Should now compile 2004-02-22 21:35 edwards * main/strippers/strip_bar3ptfn.cc: Changed to read v8. This change only reflects that the v7 currents were garbage! 2004-02-22 21:15 edwards * lib/Makefile.am: Removed unused def of HDRS. 2004-02-22 21:11 edwards * include/fitter.h: Changed to include Function.h instead of function.h 2004-02-18 21:47 tag pre_adat1-2-1 2004-02-18 21:47 tag qdp1-7-1 2004-02-18 21:47 edwards * other_libs/: c-lime/aclocal.m4, xpath_reader/aclocal.m4, c-lime/configure, xpath_reader/configure: Induced changes. 2004-02-18 21:40 edwards * other_libs/xpath_reader/examples/xpath_reader_test.cc: Yikes. With all the inlining this code can take a LONG time to compile with my favorite compiler options. Just ifdef out some stuff to get it under control. 2004-02-18 20:49 edwards * other_libs/c-lime/Makefile.am: Removed building examples. 2004-02-18 20:48 edwards * other_libs/c-lime/: configure, configure.ac: Removed building examples for now. 2004-02-18 20:47 edwards * other_libs/c-lime/: aclocal.m4, configure: Induced changes. 2004-02-18 20:47 edwards * other_libs/c-lime/examples/: Makefile.am, lime_reader_test1.c, lime_writer_test1.c: Removed broken test codes - CD says they have not been used. 2004-02-18 15:27 detar * other_libs/c-lime/lib/lime_reader.c: Added root tags and xml info field to private file and record xml strings. 2004-02-18 00:43 edwards * aclocal.m4, configure: Induced changes. 2004-02-18 00:42 edwards * include/Makefile.am: Changed function.h to Function.h 2004-02-18 00:21 tag adat1-2-0 2004-02-18 00:21 edwards * NEWS: Info on 1.2.0 2004-02-16 22:15 tag qdp1-7-0 2004-02-16 22:15 detar * other_libs/c-lime/include/lime_binary_header.h: . fix comment describing header length 2004-02-13 10:52 kostas * include/: Function.h, covarmat.h, fitter.h: Comments 2004-02-13 10:50 kostas * include/: Function.h, function.h: renamed function.h to Function.h 2004-02-13 10:37 kostas * lib/BaseFitter.cc, lib/CovarMat.cc, lib/Fitter.cc, lib/coFitter.cc, main/strippers/strip_mresZa.cc: Just comments 2004-02-13 10:33 kostas * lib/: BaseFitter.cc, CovarMat.cc, Fitter.cc, coFitter.cc: Added Doug's fitters 2004-02-13 10:32 kostas * configure, configure.ac, include/Makefile.am, include/covarmat.h, include/fitter.h, include/function.h, lib/Makefile.am, main/Makefile.am, main/fitters/Makefile.am, main/fitters/cofit.cc, main/fitters/covarprop.cc, main/fitters/fit.cc, main/fitters/polyfit.cc, main/fitters/polynomium.h, main/fitters/readcovp.cc: Added Doug's fitting programs 2004-02-10 17:21 tag qcd1-6-14 2004-02-10 17:21 tag qdp-1-6-12-prestrip 2004-02-10 17:21 tag qdp-1-6-13 2004-02-10 17:21 kostas * aclocal.m4, configure, configure.ac, include/Makefile.am, include/adat.h, include/adat_util.h, include/array_operators.h, include/proplist.h, include/statistics.h, lib/Makefile.am, lib/proplist.cc, main/Makefile.am, main/mres/Makefile.am, main/mres/mres.cc, main/strippers/Makefile.am, other_libs/xpath_reader/include/array.h: Added some statistics routines an mres computation and some operators for the Array class 2004-02-06 18:45 detar * other_libs/c-lime/: AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, aclocal.m4, configure, configure.ac, config/depcomp, config/install-sh, config/missing, config/mkinstalldirs, examples/Makefile.am, examples/lime_reader_test1.c, examples/lime_writer_test1.c, include/Makefile.am, include/lime.h, include/lime_binary_header.h, include/lime_defs.h, include/lime_fixed_types.h, include/lime_header.h, include/lime_reader.h, include/lime_utils.h, include/lime_writer.h, lib/Makefile.am, lib/lime_header.c, lib/lime_reader.c, lib/lime_utils.c, lib/lime_writer.c: Insert LIME and modify code to support it. C. DeTar 2004-01-31 17:48 edwards * main/strippers/strip_spectrum.cc: Fixed for output 8. 2004-01-29 12:54 bjoo * other_libs/xpath_reader/: examples/Makefile.am, lib/Makefile.am: Munged makefile.am-s to stop repeating compiler flags all the time 2003-12-12 07:40 tag qdp1-6-11 2003-12-12 07:40 tag qdp1-6-12 2003-12-12 07:40 bjoo * other_libs/xpath_reader/: aclocal.m4, configure: Autoheader keeps f***ing up the qdp_config.h.in file and removes my nice ifdef guards... 2003-10-30 13:16 tag adat1-1-0 2003-10-30 13:16 edwards * NEWS: News on 1.1.0 2003-10-29 22:29 edwards * main/strippers/strip_spectrum.cc: Added missing baryon printing for PP,PS,SS cases. 2003-10-29 22:05 edwards * main/strippers/strip_spectrum.cc: Fixed to now support currents and baryons. Switched to mainly version 7 style input which is the first to support currents. 2003-10-29 16:45 edwards * main/strippers/strip_spectrum.cc: Fixed to now at least read current and baryon data, but no file name generation yet for those parts. 2003-10-20 10:50 edwards * include/adat_util.h, lib/adat_byteorder.cc: Utility routines. 2003-10-20 09:14 tag pre_qdp1-6-10 2003-10-20 09:14 tag qdp1-6-10 2003-10-20 09:14 tag qdp1-6-5 2003-10-20 09:14 tag qdp1-6-6 2003-10-20 09:14 tag qdp1-6-7 2003-10-20 09:14 tag qdp1-6-8 2003-10-20 09:14 tag qdp1-6-9 2003-10-20 09:14 bjoo * other_libs/xpath_reader/include/document.h: now has call to xmlFreeDoc in Destructor 2003-10-14 13:47 edwards * include/adat.h, include/adat_io.h, lib/adat_io.cc: Added adat_io.h and adat_io.cc 2003-10-14 13:46 edwards * main/strippers/strip_bar3ptfn.cc: Changed to using a BinaryReader of the data instead of XML !!! 2003-10-14 13:46 edwards * include/Makefile.am, lib/Makefile.am: Added BinaryReader support. 2003-10-13 21:43 tag adat1-0-1 2003-10-13 21:43 edwards * NEWS: News on 1.0.1 2003-10-13 12:34 edwards * main/strippers/strip_bar3ptfn.cc: Added clock timings. 2003-10-13 12:24 tag qdp1-6-0 2003-10-13 12:24 tag qdp1-6-1 2003-10-13 12:24 tag qdp1-6-2 2003-10-13 12:24 tag qdp1-6-3 2003-10-13 12:24 tag qdp1-6-4 2003-10-13 12:24 edwards * other_libs/xpath_reader/include/array.h: Small change. Make sure to resize in operator= if sizes do not agree, not just when the orig. size =0. 2003-10-13 12:08 edwards * configure: Induced changes. 2003-10-11 00:47 edwards * main/strippers/: strip_bar3ptfn.cc, strip_spectrum.cc: Changed debugging sizes to always be allowable numbers. 2003-10-11 00:34 edwards * main/strippers/strip_bar3ptfn.cc: Added some debugging. 2003-10-11 00:31 edwards * main/strippers/strip_bar3ptfn.cc: Added a endl. 2003-10-11 00:30 edwards * main/strippers/strip_bar3ptfn.cc: Change momenta naming to always print out _qx0_qy0_qz0. 2003-10-11 00:24 edwards * main/strippers/strip_bar3ptfn.cc: Added proper filename construction. 2003-10-10 22:33 edwards * main/strippers/strip_bar3ptfn.cc: Start of file support. 2003-10-07 20:58 tag adat1-0-0 2003-10-07 20:58 edwards * include/adat.h, main/spectrum/spectrum.cc, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_spectrum.cc: Removed dos-isms. 2003-10-07 13:58 edwards * main/strippers/strip_spectrum.cc: Fixed to read output versions 5 & 6. 2003-10-07 13:39 edwards * main/strippers/strip_bar3ptfn.cc: Fixed small bug. Make sure nrow can be read in all versions. 2003-10-06 16:52 edwards * main/strippers/strip_bar3ptfn.cc: Added support for output version 6. 2003-10-02 23:30 edwards * main/strippers/strip_bar3ptfn.cc: Moved XMLReader mother into try/catch block. 2003-10-02 23:23 edwards * main/strippers/strip_spectrum.cc: Moved XMLReader mother decl inside try/catch block. 2003-09-10 16:44 bjoo * configure: must have run aclocal; autoconf; automake 2003-09-10 13:35 edwards * configure: Induced changes. 2003-09-10 13:34 edwards * include/adat.h, include/adat_xmlio.h, lib/adat_xmlio.cc, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_spectrum.cc: Changed from otto to adat. 2003-09-10 13:27 edwards * include/adat.h, include/adat_xmlio.h, include/otto.h, include/otto_xmlio.h, lib/adat_ensbc.cc, lib/adat_xmlio.cc, lib/otto_ensbc.cc, lib/otto_xmlio.cc, main/spectrum/spectrum.cc, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_spectrum.cc: Changed otto to adat. 2003-09-10 13:22 edwards * lib/Makefile.am, include/Makefile.am, main/strippers/Makefile.am, main/spectrum/Makefile.am: Changed from otto to adat. 2003-09-10 13:19 edwards * configure: Induced changes. 2003-09-10 13:18 edwards * configure.ac: Changed name from otto to adat. 2003-09-10 08:41 bjoo * include/otto_xmlio.h: Added Register Namespace Function to otto_xmlio.h 2003-09-10 08:38 bjoo * include/otto_xmlio.h: Cloning now works via open function 2003-09-10 08:07 tag qdp1-5-12 2003-09-10 08:07 tag qdp1-5-13 2003-09-10 08:07 tag qdp1-5-14 2003-09-10 08:07 tag qdp1-5-15 2003-09-10 08:07 bjoo * other_libs/xpath_reader/: examples/basic_xpath_reader_test.cc, examples/basic_xpath_reader_test2.cc, examples/foo.xml, examples/xpath_reader_test.cc, include/basic_xpath_reader.h, include/xpath_reader.h: Fixed Namespaces I think -- at least temporarily. No more namespace snarfing 2003-09-10 05:25 bjoo * other_libs/xpath_reader/include/: basic_xpath_reader.h, xpath_reader.h: Basic XPath Reader now clones via an open() call 2003-09-09 16:40 bjoo * include/otto_xmlio.h, lib/otto_xmlio.cc, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_spectrum.cc: New variant xpath_reader integrated 2003-09-09 16:29 tag qdp1-5-11 2003-09-09 16:29 bjoo * other_libs/xpath_reader/: examples/foo.xml, examples/xpath_reader_test.cc, include/basic_xpath_reader.h, include/document.h, lib/Makefile.am, lib/basic_xpath_reader.cc, lib/document.cc: Phew-- that was a messy merge for no good reason 2003-09-08 16:49 edwards * other_libs/xpath_reader/examples/: basic_xpath_reader_test.cc, basic_xpath_reader_test2.cc, xpath_reader_test.cc: Removed initXPath(). 2003-09-08 16:49 edwards * other_libs/xpath_reader/include/basic_xpath_reader.h: Moved off initXPath to basic_xpath_reader.cc . 2003-09-08 16:48 edwards * other_libs/xpath_reader/include/document.h: Moved off guts to document.cc 2003-09-08 16:48 edwards * other_libs/xpath_reader/lib/basic_xpath_reader.cc: Moved in initXPath to only live here. 2003-09-08 16:48 edwards * other_libs/xpath_reader/lib/document.cc: Moved off guts of document.h to here. 2003-09-08 16:47 edwards * other_libs/xpath_reader/lib/Makefile.am: Added document.cc . 2003-09-08 11:56 bjoo * other_libs/xpath_reader/lib/basic_xpath_reader.cc: spelling mistake correction 2003-09-08 11:56 bjoo * other_libs/xpath_reader/: include/document.h, lib/basic_xpath_reader.cc: Added some debug ifdefs 2003-09-08 11:45 bjoo * other_libs/xpath_reader/: aclocal.m4, configure, examples/basic_xpath_reader_test.cc, examples/basic_xpath_reader_test2.cc, examples/xpath_reader_test.cc, include/Makefile.am, include/basic_xpath_reader.h, include/document.h, include/xpath_reader.h, lib/basic_xpath_reader.cc: Mucked about with this again 2003-09-05 11:43 tag xpath-reader-1-2-0 2003-09-05 11:43 bjoo * other_libs/xpath_reader/: examples/basic_xpath_reader_test.cc, examples/basic_xpath_reader_test2.cc, examples/xpath_reader_test.cc, include/basic_xpath_reader.h, include/xpath_reader.h, lib/basic_xpath_reader.cc: Added side effect free version 2003-08-28 13:00 tag qdp1-5-10 2003-08-28 13:00 tag qdp1-5-6 2003-08-28 13:00 tag qdp1-5-7 2003-08-28 13:00 tag qdp1-5-8 2003-08-28 13:00 tag qdp1-5-9 2003-08-28 13:00 tag xpath-reader-1-0-0 2003-08-28 13:00 edwards * other_libs/xpath_reader/lib/basic_xpath_reader.cc: Fixes, rather work arounds, for why the open(istream) sometimes doesn't work. Fixed/avoided here by using a single char reader. Definitely not preferable! 2003-08-27 15:33 edwards * other_libs/xpath_reader/lib/basic_xpath_reader.cc: Added some missing "e"'s to "throw". 2003-08-25 07:58 bjoo * aclocal.m4, configure, include/otto_xmlio.h, lib/otto_xmlio.cc, main/strippers/strip_bar3ptfn.cc, main/strippers/strip_spectrum.cc: Added context manipulation to otto 2003-08-25 06:48 tag qdp1-5-3 2003-08-25 06:48 tag qdp1-5-4 2003-08-25 06:48 tag qdp1-5-5 2003-08-25 06:48 bjoo * other_libs/xpath_reader/: examples/basic_xpath_reader_test.cc, include/basic_xpath_reader.h, include/xpath_reader.h, lib/basic_xpath_reader.cc: Addex getCurrentContextNode setCurrentContextNode and setCurrentXPath 2003-08-20 05:39 tag qdp1-5-1 2003-08-20 05:39 tag qdp1-5-2 2003-08-20 05:39 bjoo * other_libs/xpath_reader/: aclocal.m4, configure: The modifications on aclocal, Makefile.in etc are all due to me running into automake versioning problems. Last 'creation' of these files was with automake-1.7.2 (by me) 2003-07-16 21:42 tag qdp1-4-12 2003-07-16 21:42 tag qdp1-4-13 2003-07-16 21:42 tag qdp1-5-0 2003-07-16 21:42 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2003-07-16 00:39 edwards * main/strippers/strip_spectrum.cc: Now operational. Will strip into all its many files. 2003-07-16 00:33 tag qdp-1-4-11 2003-07-16 00:33 edwards * other_libs/xpath_reader/include/array.h: Small cleanups. 2003-07-11 16:09 dgr * configure: Removed DOS new lines 2003-07-05 15:23 edwards * include/otto.h, main/strippers/Makefile.am, main/strippers/strip_bar3ptfn.cc: Added a strip_bar3ptfn.cc 2003-07-03 08:44 edwards * Makefile.am, main/spectrum/Makefile.am: More changes. 2003-07-03 08:44 edwards * main/strippers/strip_spectrum.cc: First real version. Still needs map stuff. 2003-07-03 08:43 edwards * include/otto_xmlio.h: Added checks for the array itself. 2003-07-03 08:42 edwards * other_libs/xpath_reader/include/array.h: Removed unneed copymem stuff. 2003-07-02 12:08 edwards * include/Makefile.am, include/ensbc.h, include/otto.h, include/otto_xmlio.h, lib/Makefile.am, lib/otto_ensbc.cc, lib/otto_xmlio.cc, main/Makefile.am, other_libs/Makefile.am, main/spectrum/Makefile.am, main/spectrum/spectrum.cc, main/strippers/Makefile.am, main/strippers/strip_spectrum.cc: Initial versions. 2003-07-02 12:07 edwards * config/: depcomp, install-sh, missing, mkinstalldirs: Config files. 2003-07-02 12:06 edwards * AUTHORS, COPYING, INSTALL, Makefile.am, NEWS, README, acinclude.m4, aclocal.m4, configure, configure.ac: First version. 2003-07-02 12:06 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2003-07-02 12:05 edwards * other_libs/xpath_reader/include/array.h: Added include of iostream and made cerr std::cerr 2003-06-24 05:02 bjoo * other_libs/xpath_reader/lib/xml_struct_writer.cc: Oops -- forgot to add this. B 2003-06-23 16:39 edwards * other_libs/xpath_reader/lib/xml_simplewriter.cc: Commented out writing of root comment tag! 2003-06-23 13:01 bjoo * other_libs/xpath_reader/: examples/Makefile.am, examples/struct_writer_test.cc, include/Makefile.am, include/array_type.h, include/xml_array_writer.h, include/xml_struct_writer.h, lib/Makefile.am: Added struct and array writers 2003-06-22 18:06 edwards * other_libs/xpath_reader/lib/xml_simplewriter.cc: Added writing tagname as diagnostic in dumpTag. 2003-06-18 14:11 tag qdp1-4-10 2003-06-18 14:11 tag qdp1-4-8 2003-06-18 14:11 tag qdp1-4-9 2003-06-18 14:11 bjoo * other_libs/xpath_reader/include/xml_simpleschemawriter.h: Oops forgot to add this 2003-06-18 14:07 bjoo * other_libs/xpath_reader/: examples/Makefile.am, examples/foo.xml, examples/schema_writer_test.cc, examples/simple_schema_writer_test.cc, include/Makefile.am, include/xml_schemawriter.h: Simple Schema Writer 2003-06-02 07:35 tag qdp1-4-0 2003-06-02 07:35 tag qdp1-4-0beta 2003-06-02 07:35 tag qdp1-4-1 2003-06-02 07:35 tag qdp1-4-2 2003-06-02 07:35 tag qdp1-4-3 2003-06-02 07:35 tag qdp1-4-4 2003-06-02 07:35 tag qdp1-4-5 2003-06-02 07:35 tag qdp1-4-6 2003-06-02 07:35 tag qdp1-4-7 2003-06-02 07:35 tag xpath1-0-0 2003-06-02 07:35 bjoo * other_libs/xpath_reader/: aclocal.m4, configure, examples/Makefile.am, examples/schema_writer_test.cc: First attempt at inserting a schema_writer 2003-06-02 07:35 bjoo * other_libs/xpath_reader/include/: Makefile.am, xml_schemawriter.h, xml_simplewriter.h, xml_writer.h: Added xml_schemawriter Makefile* 2003-05-13 00:21 tag pre_qdp1-3-0 2003-05-13 00:21 tag qdp1-3-0 2003-05-13 00:21 tag qdp1-3-1 2003-05-13 00:21 tag qdp1-3-2 2003-05-13 00:21 tag qdp1-3-3 2003-05-13 00:21 edwards * other_libs/xpath_reader/lib/basic_xpath_reader.cc: Apparent fixes. Version of libxml not quite in agreement with docs? Changed around handling of xmlNodeDump and xmlBufferOutput. 2003-05-12 07:30 bjoo * other_libs/xpath_reader/: examples/basic_xpath_reader_test2.cc, include/basic_xpath_reader.h, include/xpath_reader.h, lib/basic_xpath_reader.cc: Added Functions to dump contents of reader into ostreams for Robert 2003-05-12 02:05 edwards * other_libs/xpath_reader/: include/xml_simplewriter.h, lib/xml_simplewriter.cc: Prologue function now is const on object. 2003-05-12 02:05 edwards * other_libs/xpath_reader/: include/basic_xpath_reader.h, lib/basic_xpath_reader.cc: Added printRoot functions. 2003-05-10 18:44 tag qdp1-2-5 2003-05-10 18:44 edwards * other_libs/xpath_reader/: include/basic_xpath_reader.h, lib/basic_xpath_reader.cc: Added (currently empty) printRoot function. 2003-05-10 18:43 edwards * other_libs/xpath_reader/: include/xml_simplewriter.h, lib/xml_simplewriter.cc: Added (currently empty) writeXML function. 2003-05-09 02:03 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2003-05-09 02:01 edwards * other_libs/xpath_reader/: configure.ac, examples/Makefile.am, lib/Makefile.am, acinclude.m4: Removed QDP-isms. 2003-05-08 20:58 edwards * other_libs/xpath_reader/include/qdp_xpath_reader.h: Not needed. 2003-05-08 14:51 edwards * other_libs/xpath_reader/: include/xml_simplewriter.h, include/xml_writer.h, lib/xml_simplewriter.cc, lib/xml_writer.cc: Split xml_writer.h into xml_simplewriter.h with xml_writer.h a derived class. Moved code from xml_writer.cc to xml_simplewriter.cc 2003-05-08 14:51 edwards * other_libs/xpath_reader/configure: Induced changes. 2003-05-08 14:49 edwards * other_libs/xpath_reader/aclocal.m4: Induced version. 2003-05-08 14:49 edwards * other_libs/xpath_reader/include/Makefile.am: Added xml_simplewriter.h 2003-05-08 14:48 edwards * other_libs/xpath_reader/lib/Makefile.am: Added xml_simplewriter.cc 2003-05-05 13:59 bjoo * other_libs/xpath_reader/examples/simple_writer_test.cc: String normalization improved 2003-05-05 13:52 bjoo * other_libs/xpath_reader/: examples/simple_writer_test.cc, include/xml_writer.h, lib/xml_writer.cc: Indentation is better now 2003-05-05 12:22 bjoo * other_libs/xpath_reader/: examples/Makefile.am, examples/foo.xml, examples/simple_writer_test.cc, include/Makefile.am, include/array.h, include/tcomplex.h, include/xml_writer.h, lib/Makefile.am, lib/basic_xpath_reader.cc, lib/xml_writer.cc: Added writer class 2003-04-29 07:58 bjoo * other_libs/xpath_reader/: aclocal.m4, configure, examples/Makefile.am: Something about AM_LDFLAGS my automake at home didnae like 2003-04-29 07:45 bjoo * other_libs/xpath_reader/: aclocal.m4, configure, examples/Makefile.am, include/Makefile.am, include/attribute.h, lib/Makefile.am, lib/attribute.cc: Atted attribute -- attribute.h & attribute.cc 2003-04-27 23:02 edwards * other_libs/xpath_reader/include/qdp_xpath_reader.h: Temporary file. 2003-04-26 23:33 edwards * other_libs/xpath_reader/: aclocal.m4, configure: Induced changes. 2003-04-26 23:28 edwards * other_libs/xpath_reader/: AUTHORS, COPYING, INSTALL, Makefile.am, README, ToDoList, acinclude.m4, aclocal.m4, configure, configure.ac, NEWS: Version 1.0 2003-04-26 23:26 edwards * other_libs/xpath_reader/: config/depcomp, config/install-sh, config/missing, config/mkinstalldirs, examples/Makefile.am, examples/basic_xpath_reader_test.cc, examples/basic_xpath_reader_test2.cc, examples/foo.xml, examples/schema_test-v0.5.xml, examples/xpath_reader_test.cc, include/Makefile.am, include/array.h, include/basic_xpath_reader.h, include/tcomplex.h, include/xpath_reader.h, lib/Makefile.am, lib/basic_xpath_reader.cc: Version 1.0 of xpath reader.