2007-08-30 13:36 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Removed some unused bits of code. 2007-08-30 13:28 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Changed warning comment again. 2007-08-30 13:27 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Improved warning comment. 2007-08-29 09:50 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Slight rearrangements of output and some bits of code. 2007-08-29 09:34 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Changed slightly some strings in the error exit cases. 2007-08-29 09:31 edwards * lib/util/gauge/: expmat.cc, su2extract.cc, sunfill.cc: Changed QDP_error_exit to the usual QDPIO::cerr,abort. 2007-08-29 09:15 edwards * lib/util/gauge/eeu1.cc: Changed error string. 2007-08-29 09:14 edwards * lib/util/gauge/eesu2.cc: Fixed error check. 2007-08-28 13:51 edwards * tests/chroma/schrfun/schrfun-hadspec.metric.xml: Fixed paths again. 2007-08-28 13:50 edwards * tests/chroma/schrfun/schrfun-hadspec.metric.xml: Changed paths. 2007-08-28 13:44 edwards * tests/chroma/schrfun/: schrfun-hadspec.ini.xml, schrfun-hadspec.out.xml: Updated regression. 2007-08-28 13:24 uid3790 * tests/chroma/schrfun/regres.pl: Inserted missing comma. 2007-08-28 00:56 uid3790 * lib/meas/inline/hadron/inline_hadspec_w.cc: Changed slightly a diagnostic warning message. 2007-08-27 19:02 edwards * tests/chroma/schrfun/: schrfun-hadspec.out.xml, schrfun-pcac.out.xml: Updated. 2007-08-27 18:53 edwards * tests/chroma/schrfun/: regres.pl, schrfun-pcac.ini.xml, schrfun-pcac.metric.xml, schrfun-pcac.out.xml, schrfun.ini.xml, schrfun.metric.xml, schrfun.out.xml: Moved schrfun.* to schrfun-pcac.* 2007-08-27 18:51 edwards * tests/chroma/schrfun/schrfun-hadspec.metric.xml: Metric for hadspec with SF sources. 2007-08-27 18:47 edwards * tests/chroma/schrfun/regres.pl: Added schrfun-hadspec 2007-08-27 17:42 edwards * tests/chroma/schrfun/: schrfun-hadspec.ini.xml, schrfun-hadspec.out.xml, schrfun.ini.xml, schrfun.out.xml: Updated regression tests. 2007-08-27 17:22 edwards * lib/meas/inline/hadron/inline_hadspec_w.cc: Now support SF_{POINT,SHELL,WALL}_SOURCE 2007-08-27 17:19 edwards * lib/meas/inline/hadron/inline_hadspec_w.cc: Changed to only set BC if boundary is actually found. 2007-08-27 17:19 edwards * lib/meas/sources/: sf_pt_source_const.cc, sf_pt_source_const.h, sf_sh_source_const.cc, sf_sh_source_const.h, sf_wall_source_const.cc, sf_wall_source_const.h: Added fermbc to input. Added catch of bad_cast. 2007-08-27 17:18 edwards * lib/meas/sinks/: wall_sink_smearing.cc, wall_sink_smearing.h: New wall sink smearing. 2007-08-27 17:17 edwards * lib/io/qprop_io.cc: Made getFermActBoundary throw an error and NOT exit if boundary is not found. 2007-08-27 17:17 edwards * lib/Makefile.am: Added wall_sink_smearing. 2007-08-27 17:04 edwards * lib/meas/inline/hadron/inline_qqbar_w.cc: Removed searching for boundary. 2007-08-27 17:03 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Removed searching for BC. 2007-08-27 16:17 uid3790 * lib/meas/schrfun/: sf_pt_source_const.cc, sf_pt_source_const.h, sf_sh_source_const.cc, sf_sh_source_const.h, sf_source_const_aggregate.cc, sf_source_const_aggregate.h, sf_source_const_factory.h, sf_source_construction.h, sf_wall_source_const.cc, sf_wall_source_const.h: No longer used - been absorbed into chroma/lib/meas/sources. 2007-08-27 16:10 uid3790 * tests/chroma/schrfun/: schrfun-hadspec.ini.xml, schrfun-hadspec.out.xml, schrfun.ini.xml, schrfun.out.xml: Updated tests. 2007-08-27 16:07 uid3790 * lib/meas/schrfun/sfpcac_w.cc: Added debugging output for forward propagator. 2007-08-27 16:06 uid3790 * lib/util/gauge/: sf_gauge_init.cc, sf_gauge_init.h: Changed sf_gauge_init to go through GaugeState mechanisms. 2007-08-27 16:06 uid3790 * lib/meas/smear/link_smearing_aggregate.cc: Changed explicit path to LinkSmearing. 2007-08-27 16:05 uid3790 * lib/meas/sinks/: wall_sink_smearing.cc, wall_sink_smearing.h: New wall sinks. 2007-08-27 16:05 uid3790 * lib/Makefile.am: Moved schrfun sources to canonical source directory. They are now SF_SHELL_SOURCE kind of thingies like their cousins SHELL_SOURCE. 2007-08-27 16:04 uid3790 * lib/meas/sources/: sf_pt_source_const.cc, sf_pt_source_const.h, sf_sh_source_const.cc, sf_sh_source_const.h, sf_wall_source_const.cc, sf_wall_source_const.h, source_const_aggregate.cc: New sources. 2007-08-27 16:03 uid3790 * lib/meas/sources/pt_source_const.cc: Removed explicit paths. 2007-08-27 16:03 uid3790 * lib/meas/sources/sh_source_const.cc: Removed commented-out explicit paths. 2007-08-27 16:02 uid3790 * lib/meas/sources/wall_source_const.cc: Write out source type. 2007-08-27 16:02 uid3790 * lib/meas/sinks/: pt_sink_smearing.cc, sh_sink_smearing.cc: Got rid of explicit paths to sub-param groups. 2007-08-27 16:00 uid3790 * lib/meas/inline/: glue/inline_apply_gaugestate.cc, glue/inline_apply_gaugestate.h, hadron/inline_apply_fermstate_w.cc, hadron/inline_apply_fermstate_w.h: Moved params struct and inlinemeas to live inside the Env. namespace. 2007-08-27 14:24 edwards * lib/actions/ferm/linop/unprec_dwftransf_linop_w.cc: Removed explicit tag. 2007-08-27 14:18 edwards * lib/actions/ferm/invert/: invcg2.cc, invcg2.h, invcg2_array.cc, invcg2_array.h: Made single and double precision versions explicit. 2007-08-27 13:52 bjoo * lib/actions/ferm/invert/invcg2_array.h: Ooopsie 2007-08-27 10:41 bjoo * lib/actions/ferm/invert/invcg2_array.cc: Invcg2_array.cc 2007-08-25 00:56 edwards * lib/meas/smear/quark_displacement_aggregate.cc: Made path explicit. 2007-08-25 00:54 edwards * lib/meas/smear/quark_smearing_aggregate.cc: Needs an explicit path in ".path" in null group. 2007-08-25 00:51 edwards * lib/meas/smear/quark_smearing_aggregate.cc: Added a path. 2007-08-25 00:51 edwards * lib/meas/smear/quark_displacement_aggregate.cc: Fixed (I think) a path. 2007-08-25 00:49 edwards * lib/meas/smear/quark_displacement_aggregate.cc: Set the path for null group. 2007-08-25 00:37 edwards * lib/meas/sources/: pt_source_const.cc, sh_source_const.cc: Initialize version 1 to have null Displacement group. 2007-08-25 00:09 edwards * lib/Makefile.am: Added sf_{pt,sh,wall}_source_const.* and factories. New sources for Schroedinger functional. 2007-08-25 00:07 edwards * lib/meas/schrfun/: sf_pt_source_const.cc, sf_pt_source_const.h, sf_sh_source_const.cc, sf_sh_source_const.h, sf_source_const_aggregate.cc, sf_source_const_aggregate.h, sf_source_const_factory.h, sf_source_construction.h, sf_wall_source_const.cc, sf_wall_source_const.h: New sources for Schroedinger Functional. 2007-08-25 00:02 edwards * lib/meas/sources/: pt_source_const.cc, pt_source_smearing.cc, sh_source_const.cc, sh_source_smearing.cc: Replaced explict path by XMLGroup_t.path 2007-08-24 16:58 edwards * tests/chroma/schrfun/: schrfun.ini.xml, schrfun.out.xml: Removed some commented out xml. 2007-08-24 16:03 nilmani * PBS/spectrum/scripts/run_qqqdiquark_fly.pl: This perl script do qqq construction and do not write diquark in disk : Nilmani, Aug 24, 2007 2007-08-24 16:01 nilmani * PBS/spectrum/bin/parse_baryons_qqqdiquark_fly.pl: This perl script construct diquark and use that to do qqq contraction : Nilmani Aug 24, 2007 2007-08-24 15:23 edwards * lib/meas/schrfun/: schrfun.h, sfcorr_w.cc, sfcorr_w.h, sfcurcor_w.cc, sfcurcor_w.h, sfcurrents_w.cc, sfcurrents_w.h, sfpcac_w.cc, sfpcac_w.h: Split off Z_A and Z_V measurements into their own separate routines and files. Renamed sfcurcor to sfcorr. 2007-08-24 15:22 edwards * lib/Makefile.am: Added replaced sfcurcor_w with sfcorr_w and sfcurrents_w 2007-08-23 21:30 edwards * tests/chroma/hadron/stoch_group_baryon/create_chroma_xml_small_eo.pl: Generates input file for stoch_group_baryon. 2007-08-23 19:27 edwards * tests/chroma/: eig/eigbnds.out.xml, eig/ritz_Hw-v1.out.xml, gfix/coulgauge/coulgauge.out.xml, glue/fuzwilp/fuzwilp.out.xml, glue/gaugestate/gaugestate.out.xml, glue/wilslp/wilslp.out.xml, hadron/bar3ptfn/bar3ptfn.out.xml, hadron/building_blocks/bb-baryon.out.xml, hadron/building_blocks/bb-deriv.out.xml, hadron/building_blocks/bb-meson.out.xml, hadron/fermstate/fermstate.out.xml, hadron/hadron_contract/meson_2pt/meson_2pt.out.xml, hadron/hadron_contract/stoch_condensates/stoch_condensates.out.xml, hadron/hadspec/hadspec.out.xml, hadron/make_source/dilute.out.xml, hadron/make_source/make_source.out.xml, hadron/make_source/source-deriv.out.xml, hadron/make_source/source-displace.out.xml, hadron/mesonspec/mesonspec.out.xml, hadron/mres/mres.out.xml, hadron/noisy_building_blocks/nbb.out.xml, hadron/propagator/eo3dprec_s_cprec_t_clover.out.xml, hadron/propagator/eo3dprec_s_cprec_t_wilson.out.xml, hadron/propagator/iluprec_s_cprec_t_clover.bicgstab.out.xml, hadron/propagator/iluprec_s_cprec_t_clover.out.xml, hadron/propagator/iluprec_s_cprec_t_wilson.out.xml, hadron/propagator/prec_clover-stout3d.bicgstab.out.xml, hadron/propagator/prec_clover-stout3d.mr.out.xml, hadron/propagator/prec_clover-stout3d.out.xml, hadron/propagator/prec_clover.out.xml, hadron/propagator/prec_dwf.out.xml, hadron/propagator/prec_ht_contfrac5d.out.xml, hadron/propagator/prec_ovext.out.xml, hadron/propagator/prec_ovlap_contfrac5d.out.xml, hadron/propagator/prec_parwilson.out.xml, hadron/propagator/prec_wilson-smearing.out.xml, hadron/propagator/prec_wilson-twisted.out.xml, hadron/propagator/prec_wilson.ferm.out.xml, hadron/propagator/prec_wilson.out.xml, hadron/propagator/prec_zolo_nef.out.xml, hadron/propagator/unprec-ovlap-zolo4d.out.xml, hadron/propagator/unprec-zolo-ev-multi.out.xml, hadron/propagator/unprec_clover.out.xml, hadron/propagator/unprec_dwftransf.out.xml, hadron/propagator/unprec_hamberwu.out.xml, hadron/propagator/unprec_ovext.out.xml, hadron/propagator/unprec_ovlap_contfrac5d.out.xml, hadron/propagator/unprec_s_cprec_t_wilson.out.xml, hadron/propagator/unprec_wilson.out.xml, hadron/propagator/unprec_zolo_nef.out.xml, hadron/qqq/qqdiquark.out.xml, hadron/qqq/qqq.out.xml, hadron/qqqNucNuc/qqqNucNuc.out.xml, hadron/seqsource/seqsource-baryon.out.xml, hadron/seqsource/seqsource-derivmeson.out.xml, hadron/seqsource/seqsource-meson.out.xml, hadron/seqsource/seqsource-photon.out.xml, hadron/sink_smear/sink-deriv.out.xml, hadron/sink_smear/sink-displace.out.xml, hadron/sink_smear/sink_smearing.out.xml, hadron/static_light/static_light.out.xml, hadron/static_light/static_light_pot.out.xml, hadron/stoch_baryon/stoch_baryon.out.xml, hadron/stoch_meson/stoch_meson.out.xml, hadron_s/make_source/make_source_s.out.xml, hadron_s/propagator/asqtad.out.xml, hadron_s/propagator/klein_gordon.out.xml, hadron_s/sink_smear/sink_smearing_s.out.xml, io/nersc_read_obj/nersc_read_obj.out.xml, io/nersc_write_obj/nersc_write_obj.out.xml, io/qio_read_obj/qio_read_obj.out.xml, io/qio_write_obj/qio_write_obj.out.xml, io/szin_read_obj/szin_read_obj.out.xml, io/szin_write_obj/szin_write_obj.out.xml, schrfun/schrfun.out.xml, smear/link_smear/link_smear.out.xml: New regression output to match removal of StateInfo from various inline tasks. 2007-08-23 17:28 edwards * lib/util/ft/sftmom.cc: Bug fix. Removed some invalid uses of resize within a multi2d. 2007-08-23 16:11 edwards * scripts/regenerate.csh: Added a missing quote. 2007-08-23 16:07 edwards * scripts/regenerate.csh: Added check of arguments. 2007-08-23 15:02 edwards * lib/meas/schrfun/: sfcurcor_w.cc, sfcurcor_w.h, sfpcac_w.cc, sfpcac_w.h: Some code cleanups. 2007-08-23 15:02 edwards * lib/meas/inline/: eig/inline_ritz_H_w.cc, eig/inline_ritz_H_w.h, hadron/inline_mesonspec_w.cc, hadron/inline_propagator_ferm_w.cc, hadron/inline_propagator_ferm_w.h, hadron/inline_propagator_w.cc, hadron/inline_propagator_w.h, schrfun/inline_sfpcac_w.cc, schrfun/inline_sfpcac_w.h, smear/inline_link_smear.cc: Cleaned up paths to the XMLGroup objects. 2007-08-23 14:51 tag chroma3-24-2 2007-08-23 14:51 edwards * NEWS: Info on 3.24.2 2007-08-23 14:49 edwards * aclocal.m4, configure: Induced changes 2007-08-23 14:47 edwards * configure.ac: Changed to 3.24.2 2007-08-22 00:14 edwards * scripts/test_runners/mpirun_rsh_runner.sh.in: Changed to run on 4 cores instead of 2. 2007-08-19 17:26 uid3790 * mainprogs/main/hmc.cc: Added pops before exit of test on num production updates. 2007-08-19 17:21 uid3790 * mainprogs/main/hmc.cc: Put in check of start number. 2007-08-16 16:41 edwards * lib/actions/ferm/fermbcs/schr_dirich_fermbc_w.cc: Fixed registration name. 2007-08-16 16:38 edwards * lib/actions/: ferm/fermbcs/schr_dirich_fermbc_w.cc, ferm/fermbcs/schr_dirich_fermbc_w.h, gauge/gaugebcs/schr_dirich_gaugebc.cc, gauge/gaugebcs/schr_dirich_gaugebc.h, gauge/gaugebcs/schr_sf_gaugebc.cc: Reimplemented the SF Dirichlet BC case in terms like the reset of the non-perturbative BC chain of code, but simply supplying phases.lower=phases.upper=0 . 2007-08-16 14:48 edwards * lib/actions/gauge/gaugebcs/schr_dirich_gaugebc.cc: Small cleanups. 2007-08-14 12:13 tag chroma3-24-1 2007-08-14 12:13 edwards * NEWS: Info on 3.24.1 2007-08-14 12:09 edwards * aclocal.m4, configure: Induced changes 2007-08-14 12:09 edwards * configure.ac: Changed to 3.24.1 2007-08-13 14:52 edwards * NEWS: Reorged a few dates. 2007-08-13 14:52 edwards * NEWS: Small change. 2007-08-13 14:46 edwards * README: Changed minimal qdp++ version for chroma 3-24-X and above builds. 2007-08-12 16:35 edwards * lib/handle.h: Fix. Bummer, the previous code had a bug. 2007-08-12 15:23 edwards * lib/handle.h: Changed cast() to create a pointer then return a crated handle. 2007-08-12 12:07 edwards * tests/chroma/hadron/hadron_contract/stoch_condensates/stoch_condensates.metric.xml: Removed some stuff. 2007-08-11 22:12 edwards * tests/chroma/hadron/hadron_contract/stoch_condensates/stoch_condensates.metric.xml: Added a metric file for regression testing. 2007-08-11 18:48 edwards * tests/chroma/hadron/hadron_contract/: hadron-meson.ini.xml, hadron-meson.metric.xml, hadron-meson.out.xml, regres.pl, meson_2pt/meson_2pt.ini.xml, meson_2pt/meson_2pt.metric.xml, meson_2pt/meson_2pt.out.xml: Moved around regressions into subdirs. 2007-08-11 18:43 edwards * tests/chroma/hadron/stoch_condensates/: create_chroma_xml_small_eo.pl, stoch_condensates.ini.xml, stoch_condensates.out.xml: Removed. Turned into a HadroContract measurement. 2007-08-11 18:43 edwards * lib/: Makefile.am, meas/hadron/hadron_contract_aggregate.cc, meas/hadron/stoch_cond_cont_w.cc, meas/hadron/stoch_cond_cont_w.h, meas/inline/hadron/inline_hadron_aggregate.cc, meas/inline/hadron/inline_stoch_condensates_w.cc, meas/inline/hadron/inline_stoch_condensates_w.h: Removed inline_stoch_condensates and turned it into a HadronContract measurement. 2007-08-11 18:40 edwards * tests/chroma/hadron/hadron_contract/stoch_condensates/: create_chroma_xml_small_eo.pl, stoch_condensates.ini.xml, stoch_condensates.out.xml: New hadron_contract regressions. 2007-08-10 21:41 edwards * lib/handle.h: Changed operator=() to check on ptr!=p.ptr instead of this != &p . 2007-08-10 17:27 edwards * lib/Makefile.am: Added stoch_condensates.{h,cc} 2007-08-10 17:27 edwards * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_stoch_condensates_w.cc, inline_stoch_condensates_w.h: Added stochastic estimations of chiral condensates. 2007-08-10 17:26 edwards * tests/chroma/hadron/stoch_condensates/: create_chroma_xml_small_eo.pl, stoch_condensates.ini.xml, stoch_condensates.out.xml: New stochastic condensates regression. 2007-08-09 09:38 edwards * mainprogs/tests/t_stout_state.cc: Removed orthog_dir from appearing in StoutFermStateParams. 2007-08-08 22:30 edwards * lib/actions/ferm/fermstates/: stout_fermstate_params.cc, stout_fermstate_params.h: Removed orthog_dir and now only use smear_in_this_dirP. 2007-08-06 22:26 edwards * tests/regres.pl: Re-enabled nersc & szin reader/writer tests. 2007-08-06 17:37 tag chroma3-23-0-patch1-1 2007-08-06 17:37 edwards * aclocal.m4, configure: Induced changes 2007-08-06 17:36 edwards * configure.ac: Changed to 3.23.0.patch1-1 2007-08-06 17:20 edwards * NEWS: Info on 3.23.0-patch1-1 2007-08-06 17:17 edwards * lib/util/ft/sftmom.cc: Removed test for momentum averaging and non-zero source offset. The code works correctly without this test. 2007-08-06 15:18 edwards * tests/regres.pl: Turned off szin and nersc regressions for the moment till they are fixed. 2007-08-03 23:34 edwards * other_libs/intel_sse_wilson_dslash/src/parscalar/shift_tables.c: Cleaned up some more comments. Removed unused variables. 2007-08-03 23:29 edwards * other_libs/intel_sse_wilson_dslash/src/parscalar/shift_tables.c: Fixed up a comment. 2007-08-01 15:33 edwards * lib/util/ft/sftmom.cc: Removed check for origin_offset must be zero in case of momentum averaging. The check is not needed. The phase of the origin is removed in the correct way no matter whether the phases are added together or not. 2007-07-17 15:16 tag chroma3-24-0 2007-07-17 15:16 uid4709 * NEWS: Commit before 3.24.0 release 2007-07-09 11:05 bjoo * lib/actions/ferm/fermstates/: ferm_createstate_reader_s.cc, ferm_createstate_reader_s.h: Removed the registered thingie 2007-06-30 14:18 edwards * tests/chroma/hadron/stoch_group_baryon/Singly_Displaced: Added additional test. 2007-06-26 16:42 bjoo * lib/actions/ferm/linop/: clover_term_bagel_clover.cc, clover_term_bagel_clover.h, clover_term_qdp_w.cc: Added LDAGDL inversion to bagellised clover term. Changed reporting of negative diag elements to any. Passes noarch regressions 2007-06-23 17:44 bjoo * lib/actions/ferm/linop/: clover_term_qdp_w.cc, clover_term_qdp_w.h: Modded these to go with L D Ldag decomp rather than cholesky. Need to retrofit this also to the bagel_clover_term which uses slightly different data structures for the triang term. 2007-06-21 15:18 edwards * lib/meas/inline/hadron/inline_stoch_group_baryon_w.cc: Switched to a subset version of "sft". 2007-06-21 15:18 edwards * lib/meas/smear/: deriv_quark_displacement_w.cc, deriv_quark_displacement_w.h, displace.cc, displace.h: Added "E" and "Laplacian" operators. 2007-06-21 14:18 edwards * lib/util/ft/: sftmom.cc, sftmom.h: Added subset versions of "sft" function. 2007-06-21 12:06 edwards * lib/meas/inline/hadron/: inline_stoch_group_baryon_w.cc, inline_stoch_group_baryon_w.h: Changed CreationOperator to only a single time slice. 2007-06-21 12:05 edwards * tests/chroma/hadron/stoch_group_baryon/: Single_Site, regres.pl, stoch_group_baryon.ini.xml, stoch_group_baryon.metric.xml, stoch_group_baryon.out.xml: New input/output format. 2007-06-21 10:03 edwards * lib/meas/inline/hadron/inline_stoch_group_baryon_w.cc: Removed some debugging. 2007-06-21 09:32 bjoo * lib/actions/ferm/linop/: clover_term_bagel_clover.cc, clover_term_bagel_clover.h: OK! Padded DIAG term to 8 elements and now allocate both the diag and the off_diag with the QDP_allocator in order to ensure good alignment. Size of the Diag array is a mulitple of 16 (8 complexes so at least 16 reals) and the OffDiag itself should have been padded to 16 already too. Seems to work fine on the noarch. Let's see the BG/L 2007-06-20 21:44 edwards * lib/meas/inline/hadron/inline_stoch_group_baryon_w.cc: Bug fix. Now runs. 2007-06-20 21:16 edwards * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_stoch_group_baryon_w.cc, inline_stoch_group_baryon_w.h: Newer mechanism for dilution. 2007-06-20 11:35 egregory * tests/spectrum_s/spectrum_s.metric.xml: I think I fixed the xml path correctly 2007-06-20 11:35 egregory * tests/spectrum_s/spectrum_s.out.xml: some updates 2007-06-20 06:14 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: fixed problem with setting fuzz width. Also put fuzz width and volume source type in the xml output 2007-06-18 21:43 edwards * lib/Makefile.am: Added inline_stoch_group_baryon.{h,cc} 2007-06-18 15:40 edwards * lib/meas/inline/hadron/: inline_stoch_group_baryon_w.cc, inline_stoch_group_baryon_w.h: First version of a dedicated measurement for stochastic group baryon operators. 2007-06-18 15:26 bjoo * aclocal.m4, configure: Remade the autofiles with automake 1.9.2 2007-06-18 15:24 bjoo * acinclude.m4, aclocal.m4, chroma-config.in, configure, configure.ac, lib/Makefile.am, lib/chroma_config_internal.h.in, lib/actions/ferm/linop/clover_term_bagel_clover.cc, lib/actions/ferm/linop/clover_term_bagel_clover.h, lib/actions/ferm/linop/clover_term_w.h, mainprogs/main/Makefile.am, mainprogs/tests/Makefile.am, tests/regres.pl: Checked regressions pass with new QIO. Added autoconf magic for BAGEL Generated Clover Term apply. Passes those regressions too. Robert still has a few things to add and then itll be a new release. 2007-06-16 22:25 bjoo * lib/actions/ferm/linop/: clover_term_bagel_clover.cc, clover_term_bagel_clover.h, clover_term_base_w.h, clover_term_qdp_w.cc, clover_term_qdp_w.h, eoprec_clover_extfield_linop_w.cc, eoprec_clover_linop_w.cc, eoprec_slic_linop_w.cc: Moved working BAGEL Clover term implementation and reinstated QDPCloverTerm 2007-06-16 22:12 bjoo * lib/actions/ferm/linop/: clover_term_bagel_clover.cc, clover_term_bagel_clover.h: First versions work with noarch 2007-06-14 17:09 bjoo * lib/actions/ferm/linop/clover_term_qdp_w.cc: Unrolled this to the level of float ops 2007-06-13 10:14 edwards * tests/chroma/hadron/hadron_contract/regres.pl: New regression for hadron_contract. 2007-06-13 09:53 edwards * tests/regres.pl: New regression test in chroma/hadron/hadron_contract 2007-06-12 14:10 edwards * TODO: Updated laundry list. 2007-06-12 13:56 edwards * tests/chroma/hadron/hadron_contract/: hadron-meson.ini.xml, hadron-meson.metric.xml, hadron-meson.out.xml: Updated input, output and now a matching metric file. 2007-06-12 13:55 edwards * lib/meas/inline/hadron/inline_hadron_contract.cc: Changed around XML group names for output. 2007-06-12 12:11 edwards * tests/chroma/hadron/hadron_contract/: hadron-meson.ini.xml, hadron-meson.metric.xml, hadron-meson.out.xml: First version of run code. 2007-06-12 12:10 edwards * lib/util/ft/: sftmom.cc, sftmom.h: Added a default constructor. 2007-06-12 12:09 edwards * lib/meas/: hadron/hadron_2pt.cc, hadron/hadron_2pt.h, hadron/hadron_contract.cc, hadron/hadron_contract.h, hadron/simple_meson_2pt_w.cc, inline/hadron/inline_hadron_contract.cc: Rearranged the XML output. Now into a XMLBufferWriter instead of a raw string. Also have a XML regression output. 2007-06-12 09:59 edwards * mainprogs/tests/: t_dwflinop.cc, t_io.cc, t_neflinop.cc: Changed BinaryReader/Writer to BinaryFileReader/Writer and TextReader/Writer to TextFileReader/Writer. 2007-06-12 09:57 edwards * mainprogs/main/wallformfac.cc: Changed BinaryWriter to BinaryFileWriter. 2007-06-12 00:43 edwards * lib/util/ft/sftmom.h: Added doxygen comment. 2007-06-12 00:42 edwards * lib/util/ft/sftmom.h: Added a param structure and a general constructor. 2007-06-10 23:27 edwards * lib/meas/inline/hadron/: inline_hadron_contract.cc, inline_hadron_contract.h: Switched to using array XML group reader. 2007-06-10 23:26 edwards * lib/io/: xml_group_reader.cc, xml_group_reader.h: Added multi1d/array reader of GroupXML 2007-06-10 10:49 edwards * lib/meas/: hadron/hadron_2pt.cc, hadron/hadron_2pt.h, hadron/hadron_contract.cc, hadron/hadron_contract.h, hadron/hadron_contract_aggregate.cc, hadron/hadron_contract_aggregate.h, hadron/hadron_contract_factory.h, hadron/simple_baryon_2pt_w.cc, hadron/simple_baryon_2pt_w.h, hadron/simple_meson_2pt_w.cc, hadron/simple_meson_2pt_w.h, inline/hadron/inline_hadron_contract.cc, inline/hadron/inline_hadron_contract.h: New version of HadronContract routines 2007-06-10 10:40 edwards * lib/io/follana_io_s.cc, lib/io/kyugauge_io.cc, lib/io/kyuqprop_io.cc, lib/io/readcppacs.cc, lib/io/readmilc.cc, lib/io/readszin.cc, lib/io/readszinferm_w.cc, lib/io/readszinqprop_w.cc, lib/io/writemilc.cc, lib/io/writeszin.cc, lib/io/writeszinqprop_w.cc, lib/meas/hadron/BuildingBlocks_w.cc, lib/meas/hadron/group_baryon_operator_w.cc, lib/meas/hadron/hadron_2pt.cc, lib/meas/hadron/hadron_2pt.h, lib/meas/hadron/hadron_2pt_aggregate.cc, lib/meas/hadron/hadron_2pt_aggregate.h, lib/meas/hadron/hadron_2pt_factory.h, lib/meas/hadron/hadron_contract.cc, lib/meas/hadron/hadron_contract.h, lib/meas/hadron/hadron_contract_aggregate.cc, lib/meas/hadron/hadron_contract_aggregate.h, lib/meas/hadron/hadron_contract_factory.h, lib/meas/hadron/simple_meson_2pt_w.cc, lib/meas/hadron/simple_meson_2pt_w.h, lib/meas/inline/hadron/inline_bar3ptfn_w.cc, lib/meas/inline/hadron/inline_building_blocks_w.cc, lib/meas/inline/hadron/inline_hadron_2pt_w.cc, lib/meas/inline/hadron/inline_hadron_2pt_w.h, lib/meas/inline/hadron/inline_hadron_aggregate.cc, lib/meas/inline/hadron/inline_hadron_contract.cc, lib/meas/inline/hadron/inline_hadron_contract.h, lib/meas/inline/hadron/inline_noisy_building_blocks_w.cc, mainprogs/main/chroma.cc: Use new QDP classes for Binary{File,Buffer}Reader/Writer and TextFileReader/Writer. 2007-06-10 10:37 edwards * lib/Makefile.am: Removed hadron_2pt files and now have hadron_contract. 2007-06-10 10:36 edwards * aclocal.m4, configure: Induced changes 2007-06-09 18:18 edwards * README: Updated module dependencies. 2007-06-09 18:17 edwards * configure.ac: Changed to 3.24.0 2007-06-07 12:53 bjoo * mainprogs/tests/t_monomial_force.cc: Update this. Longer calibration loop now and I commented out the taproj etc etc etc 2007-06-07 11:44 bjoo * lib/actions/ferm/linop/clover_term_base_w.cc: Fixed a comment 2007-06-07 11:41 bjoo * lib/actions/ferm/linop/: clover_term_base_w.cc, clover_term_base_w.h, eoprec_clover_linop_w.cc, eoprec_clover_linop_w.h: Tuned this a little. I think I saved about 25 percent of the flops in the deriv_loops by combining mu and nu calculations and getting better reuse. However, this ought to have cut comms in a half. 2007-06-06 18:10 bjoo * lib/actions/ferm/linop/: clover_term_base_w.cc, clover_term_base_w.h: Clover term base. modified. Now precompute the trace spin outer products. Points to a place to coalesce code in deriv loops to minimize comms/compute (maximize compute/comms) 2007-06-06 13:33 nilmani * PBS/spectrum/scripts/run_qqqdiquark.pl: 06/05/07 (Nilmani) : script is modified to delete diquarks from memory and write those to disk. This will clear memory. Please check to clear scratch space so that diquarks can be written there 2007-06-05 15:48 bjoo * lib/actions/ferm/linop/: lwldslash_base_array_w.cc, lwldslash_base_w.cc: Recoded this hopefully a little faster 2007-06-01 15:32 edwards * tests/chroma/hadron/qqq/: qqdiquark.ini.xml, qqdiquark.metric.xml, qqdiquark.out.xml: Added a QIO_WRITE and READ step for testing. 2007-06-01 14:54 edwards * lib/meas/inline/io/: qio_read_obj_funcmap.cc, qio_write_obj_funcmap.cc: Added read/write for QQDiquarkContract objects. 2007-06-01 10:32 nilmani * PBS/spectrum/bin/parse_baryons_qqq.pl: 06/01/07 : Nilmani : This perl script is for constructing qqq files necessary to run qqq program : run_qqq.pl 2007-06-01 10:28 nilmani * PBS/spectrum/scripts/run_qqq.pl: 06/01/07 : Nilmani : This perl script is for running qqq program in usual way (not by constructing diquarks). To run tt needs "qqq_prop" and "parse_baryons_qqq.pl" files 2007-06-01 10:25 nilmani * PBS/spectrum/bin/parse_baryons_qqqdiquark.pl: 06/01/07 : Nilmani : This perl script constructs diquark and supply that to run qqq program : run_qqqdiquark.pl 2007-06-01 10:21 nilmani * PBS/spectrum/scripts/run_qqqdiquark.pl: 06/01/07 : Nilmani : This perl script is for running qqq program by using diquarks. Necessary files are qqq_prop and parse_baryons_qqqdiquark.pl 2007-05-31 22:42 edwards * tests/spectrum_s/spectrum_s.out.xml: Regenerated the regression output. 2007-05-31 16:49 bjoo * lib/actions/ferm/linop/clover_term_qdp_w.cc: Moved sitesOnNode call outside loop in makeClov 2007-05-31 16:48 bjoo * lib/update/heatbath/su2_hb_update.cc: Moved the sitesOnNode out of a loop 2007-05-30 16:21 edwards * mainprogs/tests/t_remez.cc: Changed power_den to 2 to match the function that is being tested, namely 1/sqrt(x). 2007-05-30 11:09 egregory * lib/meas/inline/hadron_s/util_compute_singlet_ps.cc: added missing Fuzzedsrc-Fuzzedsink connected pseudoscalar singlet propagator 2007-05-25 17:05 bjoo * mainprogs/tests/t_monomial_force.cc: Fixed oopses 2007-05-25 15:40 bjoo * mainprogs/tests/Makefile.am: t_monomial_force.cc added 2007-05-25 15:40 bjoo * tests/t_monomial_force/monomial_test.ini.xml: monomial_test.ini.xml test file for t_monomial_force 2007-05-25 15:38 bjoo * mainprogs/tests/t_monomial_force.cc: Times monomial forces, expmat, reunit and taproj 2007-05-24 17:01 bjoo * configure: Makefile updates 2007-05-24 16:45 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/actions/gauge/gaugeacts/rect_gaugeact.cc, mainprogs/tests/Makefile.am, mainprogs/tests/t_aniso_sym_force.cc: added unified anisotropic plaq + rectangle action 2007-05-24 15:36 bjoo * lib/actions/gauge/gaugeacts/: aniso_sym_shared_functions.cc, aniso_sym_shared_functions.h, aniso_sym_spatial_gaugeact.cc, aniso_sym_spatial_gaugeact.h, aniso_sym_temporal_gaugeact.cc, aniso_sym_temporal_gaugeact.h, rect_gaugeact.cc: Combiner plaq + rect. Is it any faster?? 2007-05-22 10:51 bjoo * lib/Makefile.am: Makefile.am 2007-05-22 10:50 bjoo * tests/t_leapfrog/regres.pl: Added in the regressions 2007-05-22 10:43 bjoo * tests/t_leapfrog/: t_leapfrog.aniso_sym_spatial_plus_temporal.metric.xml, t_leapfrog.aniso_sym_temporal.ini.xml, t_leapfrog.aniso_sym_temporal.log.xml, t_leapfrog.aniso_sym_temporal.metric.xml: More regressions for aniso actions 2007-05-22 10:41 bjoo * tests/t_leapfrog/: t_leapfrog.aniso_sym_spatial.ini.xml, t_leapfrog.aniso_sym_spatial.log.xml, t_leapfrog.aniso_sym_spatial.metric.xml, t_leapfrog.aniso_sym_spatial_plus_temporal.ini.xml, t_leapfrog.aniso_sym_spatial_plus_temporal.log.xml: XML Files for regressions 2007-05-22 10:19 bjoo * lib/actions/gauge/gaugeacts/: aniso_sym_gaugeact_params.cc, aniso_sym_gaugeact_params.h, aniso_sym_spatial_gaugeact.cc, aniso_sym_spatial_gaugeact.h, aniso_sym_temporal_gaugeact.cc, aniso_sym_temporal_gaugeact.h, gaugeacts_aggregate.cc: Anisotropic Tree level Symanzik improved gauge actions split into spatial and temporal bits 2007-05-21 18:21 bjoo * lib/actions/gauge/gaugeacts/: rect_gaugeact.cc, rect_gaugeact.h: Added derivSpatial and derivTemporal as well as spatialS and temporalS 2007-05-18 16:22 bjoo * lib/central_tprec_linop.h: Added in one variant of Eisenstat Trick 2007-05-17 11:30 egregory * lib/meas/hadron/ks_local_loops.cc: fixed the double-fuzzing in the kilcup trick pseudoscalar loop 2007-05-17 11:29 egregory * lib/meas/hadron/pseudoscalar_loops_s.h: fixed the double-fuzzing problem in the kilcup pseudoscalar 2007-05-17 11:29 egregory * lib/meas/hadron/pseudoscalar_loops_s.cc: fixed the double-fuzzing in the fuzzed kilcup loop pseudoscalar 2007-05-14 09:41 egregory * lib/meas/hadron/ks_local_loops.cc: added fuzzed stochastic connected pseudoscalar correlator for testing 2007-05-14 09:40 egregory * lib/meas/hadron/pseudoscalar_stoch_conn_s.cc: added fuzzed stochastic connected pseudoscalar correlator for testing purposes 2007-05-14 09:38 egregory * lib/meas/: inline/hadron_s/inline_spectrum_s.cc, hadron/ks_local_loops.h, hadron/pseudoscalar_stoch_conn_s.h: added fuzzed stochastic connected pseudoscalar correlator for testing 2007-05-10 22:32 edwards * lib/actions/ferm/invert/invbicgstab.h: Added some doxygen comments. 2007-05-10 13:54 edwards * tests/: regres.pl, chroma/hadron_s/spectrum_s/regres.pl, chroma/hadron_s/spectrum_s/spectrum_s.ini.xml, chroma/hadron_s/spectrum_s/spectrum_s.metric.xml, chroma/hadron_s/spectrum_s/spectrum_s.out.xml: Removed use of inline_spectrum_s from chroma.cc regressions. They are instead only being used by mainprogs/main/spectrum_s.cc 2007-05-10 13:48 edwards * lib/meas/inline/hadron_s/hadron_s.h: Turned back on the include of inline_spectrum_s.h 2007-05-10 13:47 edwards * lib/Makefile.am: Added back in inline_spectrum_s.{h,cc} 2007-05-10 13:46 edwards * lib/meas/inline/hadron_s/inline_spectrum_s.h: Oops, this file really is being used. The confusion on my part is that it is used in mainprogs/main/spectrum_s.cc, but not as an inline in chroma.cc 2007-05-10 13:43 edwards * lib/meas/inline/hadron_s/hadron_s.h: Removed inline spectrum_s 2007-05-09 13:21 edwards * aclocal.m4, configure: Induced changes 2007-05-09 13:19 edwards * lib/: Makefile.am, meas/hadron/baryon_2pt_w.cc, meas/hadron/baryon_2pt_w.h, meas/hadron/hadron_2pt.cc, meas/hadron/hadron_2pt.h, meas/hadron/hadron_2pt_aggregate.cc, meas/hadron/hadron_2pt_aggregate.h, meas/hadron/hadron_2pt_factory.h, meas/hadron/simple_baryon_2pt_w.cc, meas/hadron/simple_baryon_2pt_w.h, meas/hadron/simple_meson_2pt_w.cc, meas/hadron/simple_meson_2pt_w.h, meas/inline/hadron/inline_hadron_2pt_w.cc, meas/inline/hadron/inline_hadron_2pt_w.h, meas/inline/hadron_s/inline_hadron_aggregate_s.cc, meas/inline/hadron_s/inline_spectrum_s.h: Added hadron 2pt routines. 2007-05-09 08:52 mcneile * lib/Makefile.am: I have added source code for HISQ. 2007-05-09 08:51 mcneile * mainprogs/tests/t_propagator_s.cc: Wrapper for HISQ code. 2007-05-09 08:47 mcneile * lib/actions/ferm/linop/: fat7_links_s.cc, improvement_terms_s.h: I have added additional code for the HISQ inverter. 2007-05-09 08:45 mcneile * lib/actions/ferm/qprop/: hisq_qprop.cc, hisq_qprop.h: First pass at adding hisq code to chroma. 2007-05-09 08:43 mcneile * lib/actions/ferm/fermacts/: hisq_fermact_params_s.cc, hisq_fermact_params_s.h, hisq_fermact_s.cc, hisq_fermact_s.h: First pass at adding HISQ to Chroma. 2007-05-03 18:42 kostas * lib/Makefile.am: link in NPR point props 2007-05-03 18:41 kostas * lib/meas/inline/hadron/: inline_npr_w.cc, inline_npr_w.h: npr inline (point props) 2007-05-03 07:29 edwards * tests/regres.pl: Took out inline_spectrum_s 2007-05-01 14:48 dgr * PBS/spectrum/bin/parse_diquark.pl: fixed bug in parse_diquark 2007-05-01 11:27 bjoo * lib/actions/ferm/invert/invmr.cc, lib/actions/ferm/invert/invmr.h, lib/actions/ferm/invert/syssolver_linop_mr.h, tests/chroma/hadron/propagator/prec_clover-stout3d.mr.ini.xml, tests/chroma/hadron/propagator/prec_clover-stout3d.mr.metric.xml, tests/chroma/hadron/propagator/prec_clover-stout3d.mr.out.xml, tests/chroma/hadron/propagator/regres.pl: Added regressions for MR and BiCGStab. Sadly inline_spectrum_s is not working again 2007-05-01 11:06 bjoo * lib/Makefile.am, tests/chroma/hadron/propagator/prec_clover-stout3d.bicgstab.metric.xml, tests/chroma/hadron/propagator/prec_clover-stout3d.bicgstab.out.xml, tests/t_leapfrog/t_leapfrog.prec_wilson.bicgstab.metric.xml: Added BiCGStab Prop calculation 2007-05-01 10:54 bjoo * tests/chroma/hadron/propagator/: prec_clover-stout3d.bicgstab.ini.xml, regres.pl: BICGSTAB Prop 2007-05-01 10:47 bjoo * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_wilson.bicgstab.ini.xml, t_leapfrog.prec_wilson.bicgstab.log.xml: Wilson With BICGSTAB 2007-05-01 10:39 bjoo * lib/actions/ferm/invert/: invmr.cc, invmr.h, syssolver_linop_aggregate.cc, syssolver_linop_mr.h, syssolver_mdagm_aggregate.cc, syssolver_mdagm_bicgstab.cc, syssolver_mdagm_bicgstab.h, syssolver_mr_params.cc, syssolver_mr_params.h: Added MdagM BiCGStab Solver 2007-05-01 09:43 egregory * tests/spectrum_s/spectrum_s.out.xml: fixed double baryon measurement problem 2007-05-01 09:08 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: made fix so local baryons arent run twice 2007-05-01 09:07 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/actions/ferm/invert/syssolver_linop_aggregate.cc, lib/actions/ferm/qprop/central_tprec_fermact_qprop_w.cc: OK ! Makefiles etc. 2007-05-01 08:54 bjoo * tests/chroma/hadron/propagator/: iluprec_s_cprec_t_clover.bicgstab.ini.xml, iluprec_s_cprec_t_clover.bicgstab.metric.xml, iluprec_s_cprec_t_clover.bicgstab.out.xml: Metric files for Tprec ILU BiCGStab 2007-05-01 08:50 bjoo * lib/actions/ferm/invert/: invbicgstab_array.cc, invbicgstab_array.h: Oopsie 2007-05-01 08:47 bjoo * lib/actions/ferm/invert/: invbicgstab.cc, invbicgstab.h, invbicgstab_array.cc, invbicgstab_array.h, syssolver_bicgstab_params.cc, syssolver_bicgstab_params.h, syssolver_linop_bicgstab.cc, syssolver_linop_bicgstab.h: Added syssolver_bicgstab 2007-04-19 10:26 tag chroma3-23-0 2007-04-19 10:26 edwards * NEWS: Info on 3.23.0 2007-04-19 10:23 edwards * aclocal.m4, configure: Induced changes 2007-04-19 10:23 edwards * configure.ac: Changed to 3.23.0 2007-04-19 10:13 edwards * tests/chroma/hadron/hadspec/hadspec.out.xml: New output format. 2007-04-18 17:55 edwards * lib/meas/inline/hadron/inline_hadspec_w.cc: The number of baryons has changed. 2007-04-18 17:53 edwards * lib/meas/hadron/barhqlq_w.cc: Added the negative parity nucleon. 2007-04-17 22:32 edwards * lib/meas/inline/hadron/: inline_bar3ptfn_w.h, inline_building_blocks_w.h, inline_hadron_2pt_w.cc, inline_hadron_2pt_w.h, inline_hadspec_w.h, inline_make_source_ferm_w.h, inline_make_source_w.h, inline_mesonspec_w.h, inline_mres_w.h, inline_multi_propagator_w.h, inline_multipole_w.h, inline_noisy_building_blocks_w.h, inline_npr_vertex_w.h, inline_npr_w.h, inline_propagator_ferm_w.h, inline_qpropadd_w.h, inline_qpropqio_w.h, inline_qqbar_w.h, inline_qqqNucNuc_w.h, inline_sink_smear_w.h, inline_spectrumQll.h, inline_spectrum_w.h, inline_stag_to_wils.h, inline_static_light_spec_w.h: Fixed doxygen comments. 2007-04-16 23:13 edwards * lib/: actions/ferm/fermacts/bigfloat.h, actions/ferm/fermacts/fermacts.h, actions/ferm/fermacts/remez.h, actions/ferm/fermacts/remez_coeff.h, actions/ferm/fermacts/remez_gmp.cc, actions/ferm/fermacts/remez_gmp.h, actions/ferm/fermacts/remez_stub.h, update/molecdyn/monomial/bigfloat.h, update/molecdyn/monomial/genapprox.cc, update/molecdyn/monomial/genapprox.h, update/molecdyn/monomial/monomial.h, update/molecdyn/monomial/one_flavor_rat_monomial5d_w.h, update/molecdyn/monomial/one_flavor_rat_monomial_w.h, update/molecdyn/monomial/remez.h, update/molecdyn/monomial/remez_coeff.h, update/molecdyn/monomial/remez_gmp.cc, update/molecdyn/monomial/remez_gmp.h, update/molecdyn/monomial/remez_stub.h: Moved the bigfloat and remez files from the fermacts dir to the monomial dir. This is anticipation of further factory methods. 2007-04-16 23:11 edwards * lib/Makefile.am: Moved around the bigfloat and remez files from the fermacts dir to the monomial dir. The fermacts dir is way too full. The monomial dir is the right place for this stuff. 2007-04-16 20:56 edwards * aclocal.m4, configure: Induced changes 2007-04-16 20:52 edwards * other_libs/intel_sse_wilson_dslash/: aclocal.m4, configure: Induced changes 2007-04-16 11:55 tag chroma3-22-10 2007-04-16 11:55 bjoo * chroma-config.in: Fixed an oops in chroma-config.in 2007-04-16 11:49 bjoo * aclocal.m4, configure, lib/Makefile.am, mainprogs/main/hmc.cc, tests/hmc/hmc.prec_wilson.ini.xml, tests/hmc/hmc.prec_wilson.log.xml, tests/hmc/hmc.prec_wilson.out.xml, tests/hmc/hmc.prec_wilson_repro.ini.xml, tests/hmc/hmc.prec_wilson_repro.log.xml, tests/hmc/hmc.prec_wilson_repro.metric.xml, tests/hmc/hmc.prec_wilson_repro.out.xml, tests/hmc/regres.pl: OK I fixed the problem with the headers I think and added repro testing to HMC. NERSC reading regression fails 2007-04-14 16:06 edwards * tests/chroma/hadron_s/spectrum_s/: spectrum_s.metric.xml, spectrum_s.out.xml: Updated to new output. 2007-04-14 16:00 edwards * tests/chroma/hadron_s/spectrum_s/: spectrum_s.ini.xml, spectrum_s.out.xml: fixed to new form. 2007-04-14 15:48 edwards * tests/spectrum_s/spectrum_s.metric.xml: Fixed so xmldiff doesn't complain. 2007-04-11 18:10 egregory * tests/spectrum_s/spectrum_s.ini.xml: new fuzzed operator stuff is implemented 2007-04-11 18:09 egregory * tests/spectrum_s/spectrum_s.out.xml: new fuzzed operator stuff implimented 2007-04-11 17:51 egregory * lib/meas/hadron/scalar_loops_s.cc: fixed that unordered set thingie 2007-04-11 17:44 egregory * lib/meas/hadron/scalar_loops_s.cc: put in fuzzed scalar loops 2007-04-11 11:29 egregory * lib/meas/hadron/pion_sing_s.h: added fuzzed operators 2007-04-11 11:23 egregory * lib/meas/hadron/: pseudoscalar_loops_s.cc, pseudoscalar_loops_s.h, scalar_loops_s.h: added fuzzed loops 2007-04-11 11:06 egregory * lib/meas/hadron/: loops_s.h, ks_local_loops.cc: added fuzzed loops 2007-04-11 11:05 egregory * lib/meas/hadron/pion_sing_s.cc: added fuzzed scalar loops 2007-04-11 10:58 egregory * lib/meas/inline/hadron_s/util_compute_singlet_ps.cc: smeared operators for the pseudoscalar singlet meson 2007-04-11 10:57 egregory * lib/meas/inline/hadron_s/util_compute_quark_prop_s.cc: changes for variational meson spectroscopy 2007-04-11 10:57 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.h: changes and fixes related to variational meson spectroscopy` 2007-04-11 10:44 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: added and fixed some variational meson stuff 2007-04-11 00:55 juge * lib/meas/hadron/: baryon_operator.h, group_baryon_operator_w.cc, group_baryon_operator_w.h, simple_baryon_operator_w.h: Removed the extra time loop and added some routines for compatibility. 2007-04-10 23:44 edwards * lib/Makefile.am: Added MR support for multimass and system solvers. 2007-04-10 23:44 edwards * lib/lmdagm.h: Added some doxygen comments and indenting. 2007-04-10 23:43 edwards * lib/ldag.h: First version of a A^dag wrapper. 2007-04-10 23:42 edwards * lib/: actions/ferm/qprop/quarkprop4_s.cc, actions/ferm/qprop/quarkprop4_w.cc, fermact.h, stagtype_fermact_s.h, wilstype_fermact_w.h: Added mInvLinOp functions. 2007-04-10 23:42 edwards * lib/actions/ferm/invert/: syssolver_linop_mr.cc, syssolver_linop_mr.h, syssolver_mdagm_mr.cc, syssolver_mdagm_mr.h, syssolver_mr_params.cc, syssolver_mr_params.h: First versions of system solvers using MR. 2007-04-10 23:41 edwards * lib/actions/ferm/invert/: multi_syssolver_linop.h, multi_syssolver_linop_aggregate.cc, multi_syssolver_linop_aggregate.h, multi_syssolver_linop_factory.h, multi_syssolver_linop_mr.cc, multi_syssolver_linop_mr.h, multi_syssolver_mr_params.cc, multi_syssolver_mr_params.h: First versions of multimass linop solvers. 2007-04-10 23:41 edwards * lib/actions/ferm/invert/: invmr.cc, invmr.h: Updated to new API. 2007-04-10 23:40 edwards * lib/actions/ferm/invert/: minvmr.cc, minvmr.h, minvmr_array.cc: First versions. 2007-04-09 14:41 bjoo * lib/meas/inline/: make_xml_file.cc, glue/inline_plaquette.cc, glue/inline_plaquette.h: Now affix traj number to xmlfile unless it is 0 2007-04-04 16:58 bjoo * lib/actions/ferm/linop/clover_term_base_w.cc: clover force slightly rearranged. 2007-03-30 10:09 edwards * tests/hmc/: hmc.prec_wilson.log.xml, hmc.prec_wilson.out.xml: Updates. 2007-03-30 10:08 edwards * tests/t_leapfrog/: t_leapfrog.aniso_spectrum.log.xml, t_leapfrog.fixed_X_action_stout.log.xml, t_leapfrog.lw.sfnonpt.log.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.log.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.log.xml, t_leapfrog.parwilson_pqp_integrator_mts.log.xml, t_leapfrog.prec_1flav_dwf.log.xml, t_leapfrog.prec_1flav_wilson.log.xml, t_leapfrog.prec_2flav_clover.log.xml, t_leapfrog.prec_2flav_clover.sfnonpt.log.xml, t_leapfrog.prec_2flav_clover_ee_oo.log.xml, t_leapfrog.prec_clover_stout.log.xml, t_leapfrog.prec_contfrac.log.xml, t_leapfrog.prec_dwf.log.xml, t_leapfrog.prec_hasenbusch5d_dwf.log.xml, t_leapfrog.prec_hasenbusch_wilson.log.xml, t_leapfrog.prec_parwilson.log.xml, t_leapfrog.prec_wilson.log.xml, t_leapfrog.rect_gaugeact.log.xml, t_leapfrog.rect_gaugeact_1.log.xml, t_leapfrog.rect_gaugeact_aniso.log.xml, t_leapfrog.rect_gaugeact_c1t0.log.xml, t_leapfrog.rect_gaugeact_omit2linkT.log.xml, t_leapfrog.two_plaq_spatial_gaugeact.log.xml, t_leapfrog.unprec_clover.log.xml, t_leapfrog.unprec_dwf.log.xml, t_leapfrog.unprec_hasenbusch5d_dwf.log.xml, t_leapfrog.unprec_hasenbusch_wilson.log.xml, t_leapfrog.unprec_wilson.log.xml, t_leapfrog.wilson_gaugeact.log.xml, t_leapfrog.wilson_gaugeact_aniso_mom.log.xml, t_leapfrog.wilson_gaugeact_st.log.xml: Changed tag group from "n_count" to "Forces". 2007-03-29 15:35 edwards * lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_w.h: Fixed name of group - renamed to "Forces". 2007-03-23 16:41 tag choma3-22-9 2007-03-23 16:41 bjoo * lib/update/molecdyn/integrator/lcm_toplevel_integrator.cc, tests/t_leapfrog/t_leapfrog.wilson_gaugeact_aniso_mom.log.xml: Changed convention to set the dt factor to 1 over xi_mom 2007-03-23 16:21 bjoo * lib/update/molecdyn/integrator/lcm_integrator_leaps.cc, lib/update/molecdyn/integrator/lcm_integrator_leaps.h, lib/update/molecdyn/integrator/lcm_toplevel_integrator.cc, lib/update/molecdyn/integrator/lcm_toplevel_integrator.h, tests/regres.pl, tests/hmc/hmc.prec_wilson.log.xml, tests/t_leapfrog/regres.pl, tests/t_leapfrog/t_leapfrog.aniso_spectrum.log.xml, tests/t_leapfrog/t_leapfrog.fixed_X_action_stout.log.xml, tests/t_leapfrog/t_leapfrog.lw.sfnonpt.log.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.log.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.log.xml, tests/t_leapfrog/t_leapfrog.parwilson_pqp_integrator_mts.log.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_wilson.log.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.log.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.sfnonpt.log.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.log.xml, tests/t_leapfrog/t_leapfrog.prec_clover_stout.log.xml, tests/t_leapfrog/t_leapfrog.prec_contfrac.log.xml, tests/t_leapfrog/t_leapfrog.prec_dwf.log.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch5d_dwf.log.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch_wilson.log.xml, tests/t_leapfrog/t_leapfrog.prec_parwilson.log.xml, tests/t_leapfrog/t_leapfrog.prec_wilson.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_1.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_aniso.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_c1t0.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_omit2linkT.log.xml, tests/t_leapfrog/t_leapfrog.two_plaq_spatial_gaugeact.log.xml, tests/t_leapfrog/t_leapfrog.unprec_clover.log.xml, tests/t_leapfrog/t_leapfrog.unprec_dwf.log.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch5d_dwf.log.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.log.xml, tests/t_leapfrog/t_leapfrog.unprec_wilson.log.xml, tests/t_leapfrog/t_leapfrog.wilson_gaugeact.log.xml, tests/t_leapfrog/t_leapfrog.wilson_gaugeact_aniso_mom.ini.xml, tests/t_leapfrog/t_leapfrog.wilson_gaugeact_aniso_mom.log.xml, tests/t_leapfrog/t_leapfrog.wilson_gaugeact_aniso_mom.metric.xml, tests/t_leapfrog/t_leapfrog.wilson_gaugeact_st.log.xml: Added anisotropic momenta. This necessitated having to recheck all the log files 2007-03-23 12:01 bjoo * lib/: actions/gauge/gaugeacts/plaq_gaugeact.cc, update/molecdyn/monomial/force_monitors.cc: Converted force units to those of Jansen et al. Added taproj to force monitoring 2007-03-22 16:22 bjoo * aclocal.m4, configure: Remade Makefile.ins on qcdi machine 2007-03-22 16:20 bjoo * lib/Makefile.am, tests/regres.pl: Added spatial and temporal plaquette actions 2007-03-22 15:52 bjoo * lib/actions/gauge/gaugeacts/: gaugeacts_aggregate.cc, plaq_gaugeact.cc, spatial_wilson_gaugeact.h, wilson_gaugeact_params.cc, wilson_gaugeact_params.h: Appears to work. I have to check the forces tho... 2007-03-22 15:51 bjoo * tests/t_leapfrog/: regres.pl, t_leapfrog.wilson_gaugeact.ini.xml, t_leapfrog.wilson_gaugeact.log.xml, t_leapfrog.wilson_gaugeact.metric.xml, t_leapfrog.wilson_gaugeact_st.ini.xml, t_leapfrog.wilson_gaugeact_st.log.xml, t_leapfrog.wilson_gaugeact_st.metric.xml: Added WIlson gaugeact and split temporal wilson gaugeacts 2007-03-22 15:06 bjoo * lib/actions/gauge/gaugeacts/: plaq_gaugeact.cc, plaq_gaugeact.h, spatial_wilson_gaugeact.cc, spatial_wilson_gaugeact.h, temporal_wilson_gaugeact.cc, temporal_wilson_gaugeact.h, wilson_gaugeact.cc, wilson_gaugeact.h, wilson_gaugeact_params.cc, wilson_gaugeact_params.h: INitial cut 2007-03-22 13:39 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/update/molecdyn/monomial/eoprec_logdet_ee_monomial_w.h, lib/update/molecdyn/monomial/force_calc.cc, lib/update/molecdyn/monomial/force_calc.h, lib/update/molecdyn/monomial/force_monitors.cc, lib/update/molecdyn/monomial/force_monitors.h, lib/update/molecdyn/monomial/gauge_monomial.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/two_flavor_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polyprec_monomial_w.h, tests/regres.pl, tests/hmc/hmc.prec_wilson.log.xml, tests/t_leapfrog/t_leapfrog.aniso_spectrum.log.xml, tests/t_leapfrog/t_leapfrog.lw.sfnonpt.log.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.log.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.log.xml, tests/t_leapfrog/t_leapfrog.parwilson_pqp_integrator_mts.log.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_wilson.log.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.log.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.sfnonpt.log.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.log.xml, tests/t_leapfrog/t_leapfrog.prec_clover_stout.log.xml, tests/t_leapfrog/t_leapfrog.prec_contfrac.log.xml, tests/t_leapfrog/t_leapfrog.prec_dwf.log.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch5d_dwf.log.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch_wilson.log.xml, tests/t_leapfrog/t_leapfrog.prec_parwilson.log.xml, tests/t_leapfrog/t_leapfrog.prec_wilson.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_1.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_aniso.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_c1t0.log.xml, tests/t_leapfrog/t_leapfrog.rect_gaugeact_omit2linkT.log.xml, tests/t_leapfrog/t_leapfrog.two_plaq_spatial_gaugeact.log.xml, tests/t_leapfrog/t_leapfrog.unprec_clover.log.xml, tests/t_leapfrog/t_leapfrog.unprec_dwf.log.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch5d_dwf.log.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.log.xml, tests/t_leapfrog/t_leapfrog.unprec_wilson.log.xml: Reworked Force monitoring - had to update regressions. latter part was annoyingly laborious as I had to check some through 2007-03-20 09:44 tag chroma3-22-8 2007-03-20 09:44 bjoo * lib/actions/gauge/gaugeacts/wilson_gaugeact.h: Added fix to wilson_gaugeact for Jacques. Regressions pass on parscalar single. Release candidate 2007-03-18 17:59 edwards * lib/meas/inline/glue/: inline_wilslp.cc, inline_wilslp.h: Added a xml_file indirection. 2007-03-18 17:58 edwards * lib/meas/inline/hadron/inline_propagator_w.h: Changed doxygen comment. 2007-03-16 18:08 bjoo * lib/actions/ferm/linop/eo3dprec_s_cprec_t_clover_linop_w.h: Oopsie 2007-03-16 17:23 bjoo * lib/actions/ferm/linop/eo3dprec_s_cprec_t_clover_linop_w.h: Fixed some oopsies 2007-03-16 14:25 bjoo * lib/actions/ferm/linop/: clover_term_base_w.h, clover_term_qdp_w.cc, clover_term_qdp_w.h: Added ApplySite() function 2007-03-16 14:23 bjoo * lib/actions/ferm/fermacts/eo3dprec_s_cprec_t_clover_fermact_w.cc, lib/actions/ferm/fermacts/eo3dprec_s_cprec_t_clover_fermact_w.h, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/Makefile.am, mainprogs/tests/t_temp_prec.cc: Schur Preconditioned Clover Ferm Act 2007-03-16 14:22 bjoo * lib/actions/ferm/linop/: eo3dprec_s_cprec_t_clover_linop_w.cc, eo3dprec_s_cprec_t_clover_linop_w.h: Schur preconditioned clover lin op. Uses Inner CG as a quick hack. Fix this later if worth it. 2007-03-16 14:21 bjoo * tests/chroma/hadron/propagator/: eo3dprec_s_cprec_t_clover.ini.xml, eo3dprec_s_cprec_t_clover.metric.xml, eo3dprec_s_cprec_t_clover.out.xml: Test files for Schur preconditioned and Temp Preconditioned clover operator 2007-03-15 09:35 edwards * lib/update/molecdyn/monomial/force_calc.cc: Helper function for force calculations. 2007-03-15 00:48 edwards * lib/update/molecdyn/monomial/force_calc.h: Replaced simple norm2(F) with a forceCalc() call. Now write out more diagnostic forces. 2007-03-15 00:23 edwards * lib/update/molecdyn/monomial/force_calc.h: Helper function for calculating forces. 2007-03-14 23:50 edwards * README: Updated dependencies. 2007-03-14 14:21 bjoo * tests/chroma/hadron_s/spectrum_s/regres.pl: Renamed spectrum_s to inline spectrum_s 2007-03-14 12:01 bjoo * scripts/test_runners/load_leveller_queue.sh.in: Submit jobs to BGL load leveller queue 2007-03-08 16:02 bjoo * scripts/queue_chroma_regressions.pl: Typo 2007-03-08 15:59 bjoo * scripts/queue_chroma_regressions.pl: This can just queue jobs if a good queue script is given 2007-03-08 15:52 bjoo * scripts/check_regres_runner.pl: Check Regres Runner can now cope with .log files too 2007-03-08 09:18 bjoo * aclocal.m4, configure, configure.ac, lib/chroma_config_internal.h.in, lib/actions/ferm/linop/lwldslash_array_pab_w.cc, lib/actions/ferm/linop/lwldslash_w_pab.cc: Remade on qcdi01 with automake-1-9-2. Added --enable-bagel-wilson-dslash-sloppy option to allow experimantation without having to hack the code 2007-03-06 19:02 bjoo * aclocal.m4, chroma-config.in, configure, configure.ac, lib/Makefile.am, lib/chroma_config_internal.h.in, lib/actions/ferm/linop/lwldslash_w_sse.cc, lib/init/chroma_init.cc, mainprogs/main/Makefile.am, mainprogs/tests/Makefile.am, mainprogs/tests/t_lwldslash_array.cc, other_libs/intel_sse_wilson_dslash/aclocal.m4, other_libs/intel_sse_wilson_dslash/configure, other_libs/intel_sse_wilson_dslash/configure.ac, other_libs/intel_sse_wilson_dslash/examples/Makefile.am, other_libs/intel_sse_wilson_dslash/include/sse_config_internal.h.in, other_libs/intel_sse_wilson_dslash/lib/Makefile.am, other_libs/intel_sse_wilson_dslash/src/parscalar/32bit/dslash/sse_su3dslash_w.c: QMT Threads in 32 bit parscalar dslash 2007-03-05 16:10 tag chroma3-22-7 2007-03-05 16:10 bjoo * NEWS, aclocal.m4: ALl the rest 2007-03-05 16:10 bjoo * configure: Configure 2007-03-05 16:05 bjoo * configure.ac: Version bumped 2007-03-05 15:09 bjoo * lib/: singleton.h, actions/ferm/linop/lwldslash_array_pab_w.h, actions/ferm/linop/lwldslash_w_pab.cc: BGL fixes hopefully done 2007-03-05 15:02 bjoo * configure.ac, configure, aclocal.m4, lib/singleton.h, lib/actions/ferm/fermacts/eoprec_clover_extfield_fermact_w.cc, lib/actions/ferm/fermacts/eoprec_clover_fermact_w.cc, lib/actions/ferm/fermacts/eoprec_slic_fermact_w.cc, lib/actions/ferm/fermacts/unprec_clover_fermact_w.cc, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.cc, lib/actions/ferm/linop/eoprec_clover_extfield_linop_w.cc, lib/actions/ferm/linop/eoprec_slic_linop_w.h, lib/actions/ferm/linop/lwldslash_array_pab_w.h, lib/actions/ferm/linop/lwldslash_w_pab.cc, tests/regres.pl: BGL fixes 2007-03-05 15:01 bjoo * other_libs/cg-dwf/: Makefile.am, aclocal.m4, configure: Made t_dwf_cg2 an extra program so it is not built by default hopefully 2007-03-05 14:50 bjoo * aclocal.m4: Makefile.ins 2007-03-05 14:49 bjoo * configure: Configure.ac 2007-03-05 14:36 bjoo * configure, configure.ac, lib/chroma_config_internal.h.in, lib/actions/ferm/invert/syssolver_linop_cg.h, lib/actions/ferm/invert/syssolver_linop_cg_array.h, lib/actions/ferm/invert/syssolver_linop_cg_timing.h, lib/actions/ferm/invert/syssolver_mdagm_cg.h, lib/actions/ferm/invert/syssolver_mdagm_cg_array.h, lib/actions/ferm/invert/syssolver_mdagm_cg_timing.h, lib/actions/ferm/qprop/dwf_qpropt_w.h, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_lowmem_w.h, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.h: Added fixes so that checks pass 2007-03-05 11:13 bjoo * configure, configure.ac, lib/Makefile.am, lib/chroma_config_internal.h.in, lib/actions/ferm/invert/syssolver_cg_params.cc, lib/actions/ferm/invert/syssolver_cg_params.h, lib/actions/ferm/invert/syssolver_cgdwf_params.cc, lib/actions/ferm/invert/syssolver_cgdwf_params.h, lib/actions/ferm/qprop/dwf_qpropt_w.h, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_lowmem_w.h: Allows switching CG-DWF USage styles alpha verision- untested 2007-03-05 11:08 bjoo * lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.h: Replaced the origina version 2007-03-02 15:59 bjoo * lib/actions/ferm/invert/: syssolver_cgdwf_params.cc, syssolver_cgdwf_params.h: Oopsie 2007-03-02 15:58 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.h: Reworked the CG-DWF solver so that only one solver is in scope at any one time. This should cut down on memory costs. Also just for this - CGDWF - solver, I added separate residua for the single and double precision solve 2007-03-02 13:25 bjoo * lib/actions/ferm/linop/lwldslash_w_pab.h: Ok this is now supposedly fixed 2007-03-02 12:17 bjoo * scripts/test_runners/cobalt_runner.sh.in: Now uses SWOA 2007-03-01 15:13 dgr * PBS/spectrum/bin/: parse_diquark.pl, parse_group.pl: parse_group pulls out the needed Dirac indices in a given qqq parse_diquark attempts to identify common diquarks in a qqq 2007-03-01 11:02 bjoo * configure.ac: Modified configure.ac 2007-03-01 11:00 bjoo * scripts/test_runners/cobalt_runner.sh.in: Added a cobalt testcase runner for MIT BG/L 2007-03-01 09:53 bjoo * lib/actions/ferm/linop/lwldslash_w_pab.h: Activated CHROMA_WFM_NO_END. It allowed the BGL Clover Test to succeed 2007-02-28 16:32 bjoo * lib/actions/ferm/linop/: lwldslash_array_pab_w.cc, lwldslash_w_pab.cc, lwldslash_w_pab.h: Tried to clean up the refcounting in this.... AGAIN 2007-02-27 22:28 edwards * lib/meas/hadron/barcomp_diquark_w.cc: Bug fix. Needed to reverse ordering of spin indices on qc_3. 2007-02-27 22:28 edwards * lib/meas/hadron/diquark_w.cc: Small changes. Try to avoid some copy constructor calls. 2007-02-27 16:39 tag chroma3-22-6 2007-02-27 16:39 bjoo * aclocal.m4, configure: Remade autofiles for release. Now needs qdp v1.22.0 to function. QCDOC Branch potentially unstable (in BAGEL Dslash wrapper) 2007-02-27 15:28 bjoo * NEWS, configure, configure.ac, lib/Makefile.am, lib/central_tprec_linop.h, lib/eo3dprec_s_cprec_t_wilstype_fermact_w.h, lib/actions/ferm/fermacts/eo3dprec_s_cprec_t_wilson_fermact_w.cc, lib/actions/ferm/fermacts/eo3dprec_s_cprec_t_wilson_fermact_w.h, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/linop/eo3dprec_s_cprec_t_wilson_linop_w.cc, lib/actions/ferm/linop/eo3dprec_s_cprec_t_wilson_linop_w.h, lib/actions/ferm/qprop/central_tprec_fermact_qprop_w.cc, mainprogs/tests/t_temp_prec.cc, tests/regres.pl, tests/chroma/hadron/propagator/eo3dprec_s_cprec_t_wilson.ini.xml, tests/chroma/hadron/propagator/eo3dprec_s_cprec_t_wilson.metric.xml, tests/chroma/hadron/propagator/eo3dprec_s_cprec_t_wilson.out.xml: Pre versioning commit 2007-02-25 21:12 edwards * lib/io/: qprop_io.cc, qprop_io.h: Added QQDiquark_t. 2007-02-25 21:12 edwards * tests/chroma/hadron/qqq/qqdiquark.metric.xml: Fixed test. 2007-02-25 21:11 edwards * scripts/run_chroma_xmldiff.pl: Added printing of times. 2007-02-25 17:49 edwards * tests/chroma/hadron/qqq/: qqdiquark.metric.xml, regres.pl: New regression tests. 2007-02-25 17:42 edwards * tests/chroma/hadron/qqq/: qqdiquark.ini.xml, qqdiquark.metric.xml, qqdiquark.out.xml: First versions. 2007-02-25 17:42 edwards * tests/chroma/hadron/qqq/: qqq.ini.xml, qqq.out.xml: New input and output formats. 2007-02-25 17:39 edwards * lib/meas/: hadron/diquark_w.cc, hadron/diquark_w.h, inline/eig/inline_ritz_H_w.cc, inline/hadron/inline_diquark_w.cc, inline/hadron/inline_hadron_aggregate.cc, inline/hadron/inline_make_source_ferm_w.cc, inline/hadron/inline_make_source_w.cc, inline/hadron/inline_multi_propagator_w.cc, inline/hadron/inline_polar_source_w.cc, inline/hadron/inline_propagator_ferm_w.cc, inline/hadron/inline_propagator_w.cc, inline/hadron/inline_qqbar_w.cc, inline/hadron/inline_qqq_w.cc, inline/hadron/inline_seqsource_w.cc, inline/hadron/inline_sink_smear_w.cc, inline/hadron/inline_stag_to_wils.cc, inline/hadron_s/inline_make_source_s.cc, inline/hadron_s/inline_propagator_s.cc, inline/hadron_s/inline_sink_smear_s.cc: Replaced id in header with a proper unique id. 2007-02-25 17:39 edwards * lib/meas/: hadron/barcomp_diquark_w.cc, hadron/barcomp_diquark_w.h, inline/hadron/inline_qqq_diquark_w.cc, inline/hadron/inline_qqq_diquark_w.h: Construct a QQQ object from a diquark and a prop. 2007-02-25 17:37 edwards * lib/util/info/unique_id.cc: Fixed doxygen comment. 2007-02-25 17:37 edwards * lib/util/info/proginfo.cc: Indented some. 2007-02-25 17:36 edwards * lib/util/info/: unique_id.cc, unique_id.h: Generates a unique id. 2007-02-25 17:35 edwards * lib/Makefile.am: Added diquark routines and a new unique_id. 2007-02-23 16:38 bjoo * aclocal.m4, configure, lib/actions/ferm/linop/lwldslash_array_pab_w.cc, lib/actions/ferm/linop/lwldslash_array_qdpopt_w.cc, lib/actions/ferm/linop/lwldslash_array_w.cc, lib/actions/ferm/linop/lwldslash_qdpopt_w.cc, lib/actions/ferm/linop/lwldslash_w.cc, tests/regres.pl: Fixes exposed by not using level 3 dslash 2007-02-22 16:11 bjoo * lib/central_tprec_linop.h, lib/eo_linop.h, lib/eoprec_constdet_linop.h, lib/eoprec_linop.h, lib/eoprec_logdet_linop.h, lib/fermbc.h, lib/gaugeact.h, lib/linearop.h, lib/lmdagm.h, lib/syssolver.h, lib/teoprec_linop.h, lib/teoprec_logdet_linop.h, lib/tprec_linop.h, lib/tprec_logdet_linop.h, lib/actions/ferm/fermacts/eoprec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/overlap_fermact_base_w.cc, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermbcs/periodic_fermbc.h, lib/actions/ferm/fermbcs/schroedinger_fermbc_w.h, lib/actions/ferm/fermbcs/simple_fermbc.h, lib/actions/ferm/fermbcs/twisted_fermbc_w.h, lib/actions/ferm/invert/inv_gmresr_cg_array.cc, lib/actions/ferm/invert/inv_minres_array.cc, lib/actions/ferm/invert/inv_rel_cg1.cc, lib/actions/ferm/invert/inv_rel_cg2.cc, lib/actions/ferm/invert/inv_rel_gmresr_cg.cc, lib/actions/ferm/invert/inv_rel_gmresr_sumr.cc, lib/actions/ferm/invert/invbicgstab.cc, lib/actions/ferm/invert/invbicgstab_array.cc, lib/actions/ferm/invert/invcg1.cc, lib/actions/ferm/invert/invcg1_array.cc, lib/actions/ferm/invert/invcg2.cc, lib/actions/ferm/invert/invcg2_array.cc, lib/actions/ferm/invert/invcg2_timing_hacks.cc, lib/actions/ferm/invert/invmr.cc, lib/actions/ferm/invert/minv_rel_cg.cc, lib/actions/ferm/invert/minvcg.cc, lib/actions/ferm/invert/minvcg_array.cc, lib/actions/ferm/invert/multi_syssolver_mdagm_cg.h, lib/actions/ferm/invert/multi_syssolver_mdagm_cg_array.h, lib/actions/ferm/invert/syssolver_linop_cg.h, lib/actions/ferm/invert/syssolver_linop_cg_array.h, lib/actions/ferm/invert/syssolver_linop_cg_timing.h, lib/actions/ferm/invert/syssolver_mdagm_cg.h, lib/actions/ferm/invert/syssolver_mdagm_cg_array.h, lib/actions/ferm/invert/syssolver_mdagm_cg_timing.h, lib/actions/ferm/invert/syssolver_polyprec_cg.h, lib/actions/ferm/linop/asq_dsl_s.h, lib/actions/ferm/linop/asqtad_mdagm_s.h, lib/actions/ferm/linop/clover_term_base_w.h, lib/actions/ferm/linop/eoprec_ht_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_linop_base_array_w.h, lib/actions/ferm/linop/lDeltaLs_w.h, lib/actions/ferm/linop/lg5Rherm_w.h, lib/actions/ferm/linop/lg5eps_double_pass_w.h, lib/actions/ferm/linop/lg5eps_w.h, lib/actions/ferm/linop/lgherm_w.h, lib/actions/ferm/linop/llincomb.h, lib/actions/ferm/linop/lopscl.h, lib/actions/ferm/linop/lovddag_double_pass_w.h, lib/actions/ferm/linop/lovddag_w.h, lib/actions/ferm/linop/lovlap_double_pass_w.h, lib/actions/ferm/linop/lovlapms_w.h, lib/actions/ferm/linop/lwldslash_base_array_w.h, lib/actions/ferm/linop/lwldslash_base_w.h, lib/actions/ferm/linop/overlapbu_linop_w.h, lib/actions/ferm/linop/polprec_op.h, lib/actions/ferm/linop/polynomial_op.h, lib/actions/ferm/linop/unprec_dwf4d_linop_w.h, lib/actions/ferm/linop/unprec_dwf_linop_array_w.h, lib/actions/ferm/linop/unprec_dwftransf_linop_w.h, lib/actions/ferm/linop/unprec_ht_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/unprec_nef_linop_array_w.h, lib/actions/ferm/linop/unprec_ovdwf_linop_array_w.h, lib/actions/ferm/linop/unprec_ovext_linop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_nonhermop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_pv_linop_array_w.h, lib/actions/ferm/linop/unprec_parwilson_linop_w.h, lib/actions/ferm/linop/unprec_pdwf4d_linop_w.h, lib/actions/ferm/linop/unprec_ppdwf4d_linop_w.h, lib/actions/ferm/qprop/asqtad_cps_wrapper_qprop.h, lib/actions/ferm/qprop/central_tprec_fermact_qprop_w.cc, lib/actions/ferm/qprop/dwf_fermact_qprop_array_w.cc, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.h, lib/actions/ferm/qprop/eoprec_fermact_qprop.cc, lib/actions/ferm/qprop/eoprec_fermact_qprop_array.h, lib/actions/ferm/qprop/eoprec_staggered_qprop.h, lib/actions/ferm/qprop/fermact_qprop.cc, lib/actions/ferm/qprop/fermact_qprop_array.cc, lib/actions/gauge/gaugeacts/aniso_spectrum_gaugeact.h, lib/actions/gauge/gaugeacts/lw_1loop_gaugeact.h, lib/actions/gauge/gaugeacts/lw_tree_gaugeact.h, lib/actions/gauge/gaugeacts/pg_gaugeact.h, lib/actions/gauge/gaugeacts/plaq_gaugeact.h, lib/actions/gauge/gaugeacts/plaq_plus_spatial_two_plaq_gaugeact.h, lib/actions/gauge/gaugeacts/rbc_gaugeact.h, lib/actions/gauge/gaugeacts/rect_gaugeact.h, lib/actions/gauge/gaugeacts/rg_gaugeact.h, lib/actions/gauge/gaugeacts/spatial_two_plaq_gaugeact.h, lib/actions/gauge/gaugeacts/wilson_gaugeact.h, lib/meas/eig/eig_spec.cc, lib/meas/eig/eig_spec_array.cc, lib/meas/eig/gramschm.cc, lib/meas/eig/gramschm.h, lib/meas/eig/gramschm_array.cc, lib/meas/eig/gramschm_array.h, lib/meas/eig/ritz.cc, lib/meas/eig/ritz_array.cc, lib/meas/eig/sn_jacob.cc, lib/meas/eig/sn_jacob.h, lib/meas/eig/sn_jacob_array.cc, lib/meas/eig/sn_jacob_array.h, lib/meas/hadron/barQll_w.cc, lib/meas/hadron/baryon_s.cc, lib/meas/hadron/loops_w.cc, lib/meas/hadron/pion_local_s.cc, lib/meas/hadron/pion_sing_s.cc, lib/meas/hadron/pions_s.cc, lib/meas/hadron/pseudoscalar_loops_s.cc, lib/meas/hadron/pseudoscalar_stoch_conn_s.cc, lib/meas/hadron/qqbar_w.cc, lib/meas/hadron/scalar_loops_s.cc, lib/meas/hadron/stag_scalars_s.cc, lib/meas/hadron/vector_meson_s.cc, lib/meas/inline/eig/inline_ritz_H_w.cc, lib/update/heatbath/mciter32.cc, lib/update/heatbath/mciter32.h, lib/update/heatbath/su2_hb_update.cc, lib/update/heatbath/su2_hb_update.h, lib/update/heatbath/su3hb.cc, lib/update/heatbath/su3hb.h, lib/update/heatbath/su3over.cc, lib/update/heatbath/su3over.h, lib/update/molecdyn/old/wils_hamsys_w.h, lib/update/molecdyn/old/mese/clmesferm_w.cc, lib/update/molecdyn/old/mese/mesferm_w.cc, lib/update/molecdyn/old/mese/wlmesferm_w.cc, lib/update/molecdyn/predictor/mre_extrap_predictor.cc, lib/util/ft/sftmom.h, lib/util/gauge/reunit.cc, lib/util/gauge/reunit.h, lib/util/gauge/su2extract.cc, lib/util/gauge/su2extract.h, lib/util/gauge/su3proj.cc, lib/util/gauge/su3proj.h, lib/util/gauge/sun_proj.cc, lib/util/gauge/sun_proj.h, lib/util/gauge/sunfill.cc, lib/util/gauge/sunfill.h, mainprogs/tests/invcg2_prec_wilson.cc, mainprogs/tests/invcg2_timing_hacks_2.cc, mainprogs/tests/invcg2_timing_hacks_3.cc, mainprogs/tests/t_bicgstab.cc, mainprogs/tests/t_follana_io_s.cc, mainprogs/tests/t_propagator_nrqcd.cc, mainprogs/tests/t_ritz_KS.cc, mainprogs/tests/t_wlinvcg.cc: Removed Ordered and Unordered Subsets and Sets. Now just have Subsets and Sets -not Unordered or Ordered - passes regressions with suitable QDP where QDP has SSE disabled 2007-02-22 15:52 tag chroma3-22-5 2007-02-22 15:52 bjoo * NEWS, aclocal.m4, configure, configure.ac: Version Stamp before subset changes 2007-02-22 10:51 edwards * lib/meas/inline/hadron/inline_diquark_w.cc: Fixed typos. 2007-02-22 01:58 edwards * lib/meas/: hadron/diquark_w.cc, hadron/diquark_w.h, inline/hadron/inline_diquark_w.cc, inline/hadron/inline_diquark_w.h: First version of diquark routines. 2007-02-21 23:52 edwards * lib/meas/inline/hadron/inline_qqq_w.h: Changed doxygen comment. 2007-02-21 23:51 edwards * lib/meas/inline/hadron/: inline_qqq_w.cc, inline_qqq_w.h: Changed to using structs within the InlineQQQEnv namespace. 2007-02-18 13:50 bjoo * NEWS, lib/Makefile.am, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/fermacts/fermacts_w.h, lib/actions/ferm/fermacts/iluprec_s_cprec_t_clover_fermact_w.cc, lib/actions/ferm/fermacts/iluprec_s_cprec_t_clover_fermact_w.h, lib/actions/ferm/linop/iluprec_s_cprec_t_clover_linop_w.cc, lib/actions/ferm/linop/iluprec_s_cprec_t_clover_linop_w.h, lib/actions/ferm/linop/linop_w.h, mainprogs/tests/t_temp_prec.cc, tests/chroma/hadron/propagator/iluprec_s_cprec_t_clover.ini.xml, tests/chroma/hadron/propagator/iluprec_s_cprec_t_clover.metric.xml, tests/chroma/hadron/propagator/iluprec_s_cprec_t_clover.out.xml: Added ILU Preconditioned Space Central Temp Preconditioned Clover 2007-02-16 22:51 bjoo * lib/central_tprec_linop.h, lib/actions/ferm/linop/iluprec_s_cprec_t_wilson_linop_w.h, mainprogs/tests/t_temp_prec.cc: Added genral matrix A-1 to ILUPrec linop. For wilson A=0 and A-1 = -1. For clover A is the clover term with a suitable mass term. Coming soon 2007-02-16 17:52 bjoo * lib/Makefile.am, lib/central_tprec_linop.h, lib/iluprec_s_cprec_t_wilstype_fermact_w.h, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/fermacts/iluprec_s_cprec_t_wilson_fermact_w.cc, lib/actions/ferm/fermacts/iluprec_s_cprec_t_wilson_fermact_w.h, lib/actions/ferm/linop/iluprec_s_cprec_t_wilson_linop_w.cc, lib/actions/ferm/linop/iluprec_s_cprec_t_wilson_linop_w.h, lib/actions/ferm/qprop/central_tprec_fermact_qprop_w.cc, lib/actions/ferm/qprop/unprec_s_cprec_t_fermact_qprop_w.cc, mainprogs/tests/t_temp_prec.cc, tests/chroma/hadron/propagator/iluprec_s_cprec_t_wilson.ini.xml, tests/chroma/hadron/propagator/iluprec_s_cprec_t_wilson.metric.xml, tests/chroma/hadron/propagator/iluprec_s_cprec_t_wilson.out.xml, tests/chroma/hadron/propagator/regres.pl: Added ILU (RED BLACK) Preconditioned Wilson TPrec LinOp 2007-02-15 17:40 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/actions/ferm/linop/central_tprec_nospin_utils.h, lib/actions/ferm/linop/unprec_s_cprec_t_wilson_linop_w.cc, lib/actions/ferm/linop/unprec_s_cprec_t_wilson_linop_w.h: Refactored central tprec linop. Moved generic bits into central_tprec_nospin_utils.h. Changed site loops, to be able to cope with other subsets than all. - Do I really need to figure out how to do 3d even-odd subsets in QDP 2007-02-15 15:56 tag chroma3-22-4 2007-02-15 15:56 bjoo * aclocal.m4, configure, configure.ac, tests/regres.pl: Remade autofiles. Unprec Space Temp Precond Time now works 2007-02-15 14:59 bjoo * NEWS, lib/Makefile.am, lib/unprec_s_cprec_t_wilstype_fermact_w.h, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/fermacts/unprec_s_cprec_t_wilson_fermact_w.cc, lib/actions/ferm/fermacts/unprec_s_cprec_t_wilson_fermact_w.h, lib/actions/ferm/linop/unprec_s_cprec_t_wilson_linop_w.h, lib/actions/ferm/qprop/unprec_s_cprec_t_fermact_qprop_w.cc, mainprogs/tests/t_temp_prec.cc, tests/regres.pl, tests/chroma/hadron/propagator/regres.pl, tests/chroma/hadron/propagator/unprec_s_cprec_t_wilson.ini.xml, tests/chroma/hadron/propagator/unprec_s_cprec_t_wilson.metric.xml, tests/chroma/hadron/propagator/unprec_s_cprec_t_wilson.out.xml, tests/chroma/hadron/propagator/unprec_wilson.ini.xml, tests/chroma/hadron/propagator/unprec_wilson.metric.xml, tests/chroma/hadron/propagator/unprec_wilson.out.xml: Wrapped FermAct round Central TPrec LinOp and wrote qprop 2007-02-13 17:25 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/central_tprec_linop.h, lib/actions/ferm/linop/unprec_s_cprec_t_wilson_linop_w.cc, lib/actions/ferm/linop/unprec_s_cprec_t_wilson_linop_w.h, mainprogs/tests/Makefile.am, mainprogs/tests/t_temp_prec.cc: Added Space Unpreconditioned Time Preconditioned Wilson Op 2007-02-11 17:57 edwards * lib/util/gauge/gauge_init_aggregate.cc: Ooops, forgot to add "SZIN". Now done. 2007-02-08 10:49 tag chroma3-22-3 2007-02-08 10:49 bjoo * configure, configure.ac: Remade autofiles 2007-02-08 10:48 bjoo * NEWS, aclocal.m4, configure, lib/actions/ferm/linop/lwldslash_array_qdpopt_w.cc, lib/actions/ferm/linop/lwldslash_array_w.cc, lib/io/enum_io/enum_io.h, lib/io/enum_io/enum_wvfkind_io.cc, lib/io/enum_io/enum_wvfkind_io.h: Fixed Wfkind thing 2007-02-06 10:27 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/chroma_config_internal.h.in, mainprogs/tests/Makefile.am, mainprogs/tests/t_lwldslash_array.cc, mainprogs/tests/t_lwldslash_new.cc, other_libs/cg-dwf/aclocal.m4, other_libs/cg-dwf/configure: Added faster dslashes in QDP 2007-02-06 10:20 bjoo * lib/actions/ferm/linop/: dslash_array_w.h, dslash_w.h, lwldslash_array_qdpopt_w.cc, lwldslash_array_qdpopt_w.h, lwldslash_qdpopt_w.cc, lwldslash_qdpopt_w.h: Added faster QDP Dslashen 2007-02-04 17:57 edwards * lib/meas/smear/link_smearing_aggregate.cc: Changed str() to printCurrentContext() 2007-02-04 17:54 edwards * tests/: hmc/hmc.prec_wilson.out.xml, chroma/schrfun/schrfun.ini.xml, chroma/schrfun/schrfun.out.xml: New regression output. 2007-02-04 17:52 edwards * lib/util/gauge/szinqio_gauge_init.cc: Changed print str() to printCurrentContext() 2007-02-04 17:49 edwards * mainprogs/main/hmc.cc: Added gauge init to linkage. 2007-02-04 17:44 edwards * mainprogs/main/hmc.cc: Moved around try/catch. 2007-02-04 17:41 edwards * mainprogs/main/hmc.cc: Fixed a small typo. 2007-02-04 17:40 edwards * mainprogs/main/: chroma.cc, hmc.cc: Added try/catch around gauge init. 2007-02-04 17:09 edwards * lib/meas/: smear/link_smearing_aggregate.cc, sources/pt_source_const.cc, sources/sh_source_const.cc: Switched to using link_smearing.path 2007-02-04 17:08 edwards * lib/io/io.h: Added xml_group_reader.h 2007-02-04 17:07 edwards * lib/Makefile.am: Added new gauge initializers. 2007-02-04 17:07 edwards * mainprogs/main/: chroma.cc, hmc.cc: Switched to using new gauge initializer object. 2007-02-04 17:06 edwards * lib/util/gauge/: cppacs_gauge_init.cc, cppacs_gauge_init.h, disordered_gauge_init.cc, disordered_gauge_init.h, gauge.h, gauge_init.h, gauge_init_aggregate.cc, gauge_init_aggregate.h, gauge_init_factory.h, kyu_gauge_init.cc, kyu_gauge_init.h, milc_gauge_init.cc, milc_gauge_init.h, nersc_gauge_init.cc, nersc_gauge_init.h, sf_gauge_init.cc, sf_gauge_init.h, szin_gauge_init.cc, szin_gauge_init.h, szinqio_gauge_init.cc, szinqio_gauge_init.h, unit_gauge_init.cc, unit_gauge_init.h, weak_gauge_init.cc, weak_gauge_init.h: New gauge initializers. 2007-02-02 10:30 edwards * lib/meas/inline/hadron/inline_qqq_w.cc: Changed barprop_1d to have type ComplexF. 2007-02-02 00:22 edwards * lib/: io/qprop_io.cc, io/qprop_io.h, meas/hadron/barcomp_w.cc, meas/hadron/barcomp_w.h, meas/inline/hadron/inline_qqq_w.cc, meas/inline/hadron/inline_qqq_w.h: Moved QQQSpinIndices and the reader/writer to qprop_io. Now QQQBarcomp_t knows about spin indices. 2007-02-02 00:21 edwards * tests/chroma/hadron/qqq/qqq.out.xml: Updated output format. 2007-02-01 22:49 edwards * lib/meas/: hadron/barcomp_w.cc, hadron/barcomp_w.h, inline/hadron/inline_qqq_w.cc, inline/hadron/inline_qqq_w.h: Added sparse QQQ output format. 2007-02-01 22:49 edwards * tests/chroma/hadron/qqq/: qqq.ini.xml, qqq.out.xml: New sparse output format. 2007-01-20 16:57 edwards * lib/actions/ferm/invert/minvcg.cc: Added missing "stop" of swatch. 2007-01-16 21:54 edwards * configure: Induced changes. 2007-01-16 21:53 edwards * lib/Makefile.am, mainprogs/main/Makefile.am, mainprogs/tests/Makefile.am: Removed old altivec and sse cg structure. 2007-01-16 21:50 edwards * configure.ac: Removed old altivec and sse cg codes. 2007-01-16 21:50 edwards * lib/: Makefile.am, actions/ferm/qprop/eoprec_dwf_qprop_array_altivec_w.cc, actions/ferm/qprop/eoprec_dwf_qprop_array_altivec_w.h, actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.cc, actions/ferm/qprop/eoprec_dwf_qprop_array_sse_w.cc, actions/ferm/qprop/eoprec_dwf_qprop_array_sse_w.h: Removed old usage of altivec and sse dwf cg codes. Do not need eoprec_cg_dwf wrapper. 2007-01-16 21:39 edwards * lib/actions/ferm/qprop/: avp_altivecf_solver.cc, avp_altivecf_solver.h, avp_bgld_solver.cc, avp_bgld_solver.h, avp_bglf_solver.cc, avp_bglf_solver.h, avp_inverter_interface.h, avp_ssed_solver.cc, avp_ssed_solver.h, avp_ssef_solver.cc, avp_ssef_solver.h: Added doxygen comments. Also put in appropriate printing of name of inverter being called. 2007-01-11 01:16 juge * lib/meas/hadron/group_baryon_operator_w.h: Removed extra cfg variable from QQQ routines. 2007-01-11 01:01 juge * lib/meas/hadron/group_baryon_operator_w.cc: Removed extra cfg variable from QQQs. 2007-01-08 09:07 bjoo * other_libs/cg-dwf/: aclocal.m4, configure: Re-autoified with v 1.9.2 tools 2007-01-08 09:04 bjoo * other_libs/cg-dwf/: Makefile.am, aclocal.m4, configure: Hopefully fixed the automake file 2007-01-05 14:10 bjoo * other_libs/cg-dwf/: aclocal.m4, configure: Remade autofiles 2007-01-05 14:06 bjoo * other_libs/cg-dwf/: Makefile.am, aclocal.m4, configure, configure.ac, dwf-ssed.h, dwf-ssef.h, dwf.c, t_dwf_cg2.c: Added in timings stuff 2007-01-04 21:53 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Changed "QDPIO::cerr" to "cerr" so any node can print the error output of a det() < 0. 2007-01-03 12:53 tag chroma3-22-2 2007-01-03 12:53 bjoo * configure, configure.ac, lib/actions/ferm/linop/clover_term_qdp_w.cc: Added check for logs of negative numbers - added new revision number to configure.ac 2006-12-29 00:04 edwards * NEWS: Infon on 3.22.1 and 3.22.0. 2006-12-28 12:34 tag chroma3-22-1 2006-12-28 12:34 bjoo * lib/update/molecdyn/: integrator/abs_integrator.h, integrator/lcm_4mn4fp_recursive.h, integrator/lcm_4mn5fp_recursive.h, integrator/lcm_4mn5fv_recursive.h, integrator/lcm_creutz_gocksch_4_recursive.h, integrator/lcm_exp_sdt.h, integrator/lcm_exp_tdt.h, integrator/lcm_sts_leapfrog_recursive.h, integrator/lcm_sts_min_norm2_recursive.h, integrator/lcm_tst_leapfrog_recursive.h, integrator/lcm_tst_min_norm2_recursive.h, monomial/abs_monomial.h, monomial/two_flavor_hasenbusch_monomial5d_w.h, monomial/two_flavor_hasenbusch_monomial_w.h, monomial/two_flavor_monomial5d_w.h, monomial/two_flavor_monomial_w.h, monomial/two_flavor_polyprec_monomial_w.h, predictor/last_solution_predictor.h, predictor/linear_extrap_predictor.h, predictor/mre_extrap_predictor.h, predictor/zero_guess_predictor.h: Dealt with Chrono resetting. Added resetPredictors into monomial base class and into component integrators. Toplevel integrator can explicitly reset chron predictors at start of traj now. Previously this was implicitly done in the field copying routine setInternalFields. Since now most of the time we dont copy I had to explicitly call the predictor reset at the start of the traj. Predictors are also implicitly called after field refreshments and before solves in action calculations 2006-12-28 10:41 bjoo * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_hasenbusch5d_dwf.ini.xml, t_leapfrog.prec_hasenbusch5d_dwf.log.xml, t_leapfrog.prec_hasenbusch5d_dwf.metric.xml, t_leapfrog.unprec_hasenbusch5d_dwf.ini.xml, t_leapfrog.unprec_hasenbusch5d_dwf.log.xml, t_leapfrog.unprec_hasenbusch5d_dwf.metric.xml: Added Unprec and Prec Hasenbusch 5D Monomial tests for DWF 2006-12-28 10:40 bjoo * lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial5d_w.h: Removed some diagnostic couts 2006-12-28 10:39 bjoo * mainprogs/tests/t_leapfrog.cc: Added a few comments here and there 2006-12-28 10:39 bjoo * lib/update/molecdyn/monomial/: eoprec_constdet_two_flavor_hasenbusch_monomial5d_w.cc, two_flavor_hasenbusch_monomial5d_w.h, unprec_two_flavor_hasenbusch_monomial5d_w.cc, unprec_two_flavor_hasenbusch_monomial5d_w.h: Made the 5D Hasenbusch monomials work finally 2006-12-27 20:39 tag chroma3-22-0 2006-12-27 20:39 bjoo * aclocal.m4, configure: Remade autotools1.9.2 files 2006-12-27 20:20 bjoo * tests/t_leapfrog/: t_leapfrog.prec_hasenbusch_wilson.ini.xml, t_leapfrog.prec_hasenbusch_wilson.log.xml, t_leapfrog.prec_parwilson.ini.xml, t_leapfrog.prec_parwilson.log.xml, t_leapfrog.prec_polynomial_wilson.ini.xml, t_leapfrog.prec_wilson.ini.xml, t_leapfrog.prec_wilson.log.xml, t_leapfrog.rect_gaugeact.ini.xml, t_leapfrog.rect_gaugeact.log.xml, t_leapfrog.rect_gaugeact_1.ini.xml, t_leapfrog.rect_gaugeact_1.log.xml, t_leapfrog.rect_gaugeact_aniso.ini.xml, t_leapfrog.rect_gaugeact_aniso.log.xml, t_leapfrog.rect_gaugeact_c1t0.ini.xml, t_leapfrog.rect_gaugeact_c1t0.log.xml, t_leapfrog.rect_gaugeact_omit2linkT.ini.xml, t_leapfrog.rect_gaugeact_omit2linkT.log.xml, t_leapfrog.two_plaq_spatial_gaugeact.ini.xml, t_leapfrog.two_plaq_spatial_gaugeact.log.xml, t_leapfrog.unprec_clover.ini.xml, t_leapfrog.unprec_clover.log.xml, t_leapfrog.unprec_dwf.ini.xml, t_leapfrog.unprec_dwf.log.xml, t_leapfrog.unprec_hasenbusch_wilson.ini.xml, t_leapfrog.unprec_hasenbusch_wilson.log.xml, t_leapfrog.unprec_wilson.ini.xml, t_leapfrog.unprec_wilson.log.xml: Converted all to new MD Scheme 2006-12-27 13:33 kostas * lib/meas/inline/hadron/inline_stag_to_wils.cc: .... 2006-12-25 23:36 kostas * lib/meas/inline/hadron/inline_stag_to_wils.cc: .. 2006-12-25 22:55 bjoo * tests/t_leapfrog/: t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.ini.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.log.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.ini.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.log.xml, t_leapfrog.parwilson_pqp_integrator_mts.ini.xml, t_leapfrog.parwilson_pqp_integrator_mts.log.xml, t_leapfrog.prec_1flav_dwf.ini.xml, t_leapfrog.prec_1flav_dwf.log.xml, t_leapfrog.prec_1flav_wilson.ini.xml, t_leapfrog.prec_1flav_wilson.log.xml, t_leapfrog.prec_2flav_clover.ini.xml, t_leapfrog.prec_2flav_clover.log.xml, t_leapfrog.prec_2flav_clover.sfnonpt.ini.xml, t_leapfrog.prec_2flav_clover.sfnonpt.log.xml, t_leapfrog.prec_2flav_clover_ee_oo.ini.xml, t_leapfrog.prec_2flav_clover_ee_oo.log.xml, t_leapfrog.prec_clover_stout.ini.xml, t_leapfrog.prec_clover_stout.log.xml, t_leapfrog.prec_contfrac.ini.xml, t_leapfrog.prec_contfrac.log.xml, t_leapfrog.prec_dwf.ini.xml, t_leapfrog.prec_dwf.log.xml: Fixed about half of the regressions 2006-12-25 17:54 bjoo * lib/Makefile.am, lib/update/molecdyn/integrator/integrator.h, lib/update/molecdyn/integrator/integrator_aggregate.cc, lib/update/molecdyn/integrator/lcm_min_norm2_recursive.cc, lib/update/molecdyn/integrator/lcm_min_norm2_recursive.h, lib/update/molecdyn/integrator/lcm_sts_min_norm2_recursive.cc, lib/update/molecdyn/integrator/lcm_sts_min_norm2_recursive.h, lib/update/molecdyn/integrator/lcm_tst_leapfrog_recursive.cc, lib/update/molecdyn/integrator/lcm_tst_leapfrog_recursive.h, lib/update/molecdyn/integrator/lcm_tst_min_norm2_recursive.cc, lib/update/molecdyn/integrator/lcm_tst_min_norm2_recursive.h, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_qpq_integrator_mts.ini.xml: Added TST versions of leapfrog and min norm 2 2006-12-25 17:33 bjoo * tests/t_leapfrog/: t_leapfrog.aniso_spectrum.ini.xml, t_leapfrog.aniso_spectrum.log.xml, t_leapfrog.fixed_X_action_stout.ini.xml, t_leapfrog.fixed_X_action_stout.log.xml, t_leapfrog.lw.sfnonpt.ini.xml, t_leapfrog.lw.sfnonpt.log.xml: Converted 2006-12-25 16:56 bjoo * lib/Makefile.am: Code now builds. Regressions dont yet work. 1.6.2 build files 2006-12-25 16:50 bjoo * tests/hmc/: hmc.prec_wilson.ini.xml, hmc.prec_wilson.log.xml, hmc_new.prec_wilson.ini.xml, hmc_new.prec_wilson.log.xml, hmc_new.prec_wilson.metric.xml, regres.pl: Moved hmc_new.prec_wilson tests on to hmc.prec_wilson tests 2006-12-25 16:40 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/io/io.h, lib/io/monomial_io.cc, lib/update/molecdyn/hamiltonian/abs_hamiltonian.h, lib/update/molecdyn/hamiltonian/exact_hamiltonian.cc, lib/update/molecdyn/hamiltonian/exact_hamiltonian.h, lib/update/molecdyn/hmc/abs_hmc.h, lib/update/molecdyn/hmc/lcm_hmc.h, lib/update/molecdyn/integrator/abs_integrator.h, lib/update/molecdyn/integrator/integrator.h, lib/update/molecdyn/integrator/integrator_aggregate.cc, lib/update/molecdyn/integrator/integrator_aggregate.h, lib/update/molecdyn/integrator/lcm_integrator_leaps.cc, lib/update/molecdyn/integrator/lcm_integrator_leaps.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.h, lib/update/molecdyn/integrator/lcm_pqp_leapfrog.cc, lib/update/molecdyn/integrator/lcm_pqp_leapfrog.h, lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.cc, lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.h, lib/update/molecdyn/integrator/lcm_sexton_weingarten.cc, lib/update/molecdyn/integrator/lcm_sexton_weingarten.h, lib/update/molecdyn/integrator/lcm_sw_min_mixed.cc, lib/update/molecdyn/integrator/lcm_sw_min_mixed.h, lib/update/molecdyn/integrator/lcm_toplevel_integrator.h, lib/update/molecdyn/integrator/md_integrator_factory.h, mainprogs/main/Makefile.am, mainprogs/main/hmc.cc, mainprogs/tests/Makefile.am, mainprogs/tests/t_leapfrog.cc: Old MD Strip complete. New removed from names. Linkage problem in readNamedMonomialArray see if this will go away 2006-12-25 16:36 bjoo * mainprogs/tests/t_leapfrog.cc: Moved new t_leapfrog_component to t_leapfrog 2006-12-25 16:35 bjoo * mainprogs/tests/t_leapfrog_component.cc: Moving t_leapfrog_component to t_leapfrog 2006-12-25 16:34 bjoo * mainprogs/tests/t_leapfrog.cc: Removed old t_leapfrog.cc 2006-12-25 16:26 bjoo * mainprogs/main/: hmc.cc, hmc_new.cc: Removed old hmc.cc 2006-12-25 16:10 bjoo * lib/update/molecdyn/hmc/: abs_hmc.h, abs_hmc_new.h, hmc.h, lcm_hmc.h, lcm_hmc_new.h: MOved new HMC files in place of old 2006-12-25 16:08 bjoo * lib/update/molecdyn/hmc/: abs_hmc.h, hmc.h, lcm_hmc.h: Removed old HMC Files 2006-12-21 17:49 tag chroma3-21-1-pre-md-strip 2006-12-21 17:49 bjoo * aclocal.m4, configure: Remade autofiles with 1.9.2 2006-12-21 17:46 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/update/molecdyn/integrator/integrator_aggregate.cc, lib/update/molecdyn/integrator/lcm_4mn5fp_recursive.cc, lib/update/molecdyn/integrator/lcm_4mn5fp_recursive.h, lib/update/molecdyn/integrator/lcm_4mn5fv_recursive.cc: Added 4MN5FP integrator 2006-12-20 15:23 bjoo * lib/update/molecdyn/integrator/: lcm_creutz_gocksch_4_recursive.cc, lcm_creutz_gocksch_4_recursive.h: Oops 2006-12-20 15:22 bjoo * lib/: Makefile.am, update/molecdyn/integrator/integrator_aggregate.cc: Added 4th order Creutz-Gocksch-Campostrini integrator 2006-12-20 14:14 bjoo * lib/Makefile.am: Makefile.am 2006-12-20 14:12 bjoo * lib/update/molecdyn/integrator/: integrator_aggregate.cc, lcm_4mn4fp_recursive.cc, lcm_4mn4fp_recursive.h, lcm_4mn5fv_recursive.h: Added 4th order minimum norm 4 force calculation position variant 2006-12-20 13:52 bjoo * lib/update/molecdyn/integrator/: lcm_4mn5fv_recursive.cc, lcm_4mn5fv_recursive.h: De Forcrand Takaishi 4th order 5 force Velocity Version Integrator 2006-12-11 12:20 edwards * lib/meas/hadron/: baryon_spinmat_funcmap_w.cc, baryon_spinmat_funcmap_w.h, simple_baryon_seqsrc_w.cc: Added a function-map for the baryon spin matrices. Now have a generic NUCL-NUCL and DELTA-DELTA sequential source. 2006-12-11 12:19 edwards * lib/Makefile.am: Added baryon_spinmat_funcmap_w.{h,cc} 2006-12-11 10:41 edwards * lib/meas/hadron/barspinmat_w.h: Added include of chromabase.h 2006-12-10 16:32 tag chroma3-21-1 2006-12-10 16:32 edwards * NEWS: Info on 3.21.1 2006-12-10 16:26 edwards * aclocal.m4, configure: Induced changes 2006-12-10 16:22 edwards * configure.ac: Changed to 3.21.1 2006-12-09 22:45 edwards * tests/chroma/hadron_s/propagator/klein_gordon.out.xml: Updated. 2006-12-09 21:06 edwards * lib/io/enum_io/enum_wvfkind_io.h: Moved obsolete enums into here. 2006-12-09 21:06 edwards * lib/io/enum_io/enum_wavetype_io.h: Moved obsolete enum into here. 2006-12-09 21:05 edwards * lib/io/: qprop_io.cc, qprop_io.h: Added a getMass() function. 2006-12-09 21:04 edwards * lib/: meas/smear/sink_smear2.cc, meas/smear/sink_smear2.h, meas/smear/smear.h, meas/smear/wvfkind.h, meas/sources/d_src_w.cc, meas/sources/d_src_w.h, meas/sources/maksrc2_w.cc, meas/sources/p_src_w.cc, meas/sources/p_src_w.h, meas/sources/sources.h, meas/sources/sources_w.h, meas/sources/srcsnktype.h, meas/sources/wavetype.h, io/io.h, io/smearing_io.cc, io/smearing_io.h, io/enum_io/enum_gaugebc_io.cc, io/enum_io/enum_gaugebc_io.h, io/enum_io/enum_io.h, io/enum_io/enum_srcsnktype_io.cc, io/enum_io/enum_srcsnktype_io.h: Removed obsolete files. 2006-12-09 21:04 edwards * lib/meas/hadron/: D_j_w.cc, D_j_w.h, DjDk_w.cc, DjDk_w.h, hadron_w.h: Removed obsolete D_j and DjDk files. 2006-12-09 21:04 edwards * lib/meas/hadron/group_baryon_operator_w.cc: Changed include of chroma.h to chromabase.h 2006-12-09 21:03 edwards * lib/meas/hadron/group_baryon_operator_w.h: Removed unused include of srcsnktype.h 2006-12-09 21:02 edwards * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_hadspec_w.cc, inline_hadspec_w.h, inline_mesonspec_w.cc, inline_mres_w.h, inline_qpropqio_w.h, inline_qqbar_w.h, inline_qqq_w.cc, inline_qqq_w.h, inline_spectrumQll.cc, inline_spectrumQll.h, inline_spectrum_w.cc, inline_spectrum_w.h, inline_static_light_spec_w.cc, inline_static_light_spec_w.h: Removed old sink_smear2.h includes. Changed all places that searched for a quark mass to now go through a getMass() function like getBC function. 2006-12-09 20:59 edwards * lib/meas/inline/hadron/: inline_qqqNucNuc_w.cc, inline_qqqNucNuc_w.h: Removed sink_smearing options. Now, the props are passed in already sink_smear. 2006-12-09 20:58 edwards * lib/meas/inline/hadron_s/inline_spectrum_s.cc: Removed unused sink_smear2.h 2006-12-09 20:56 edwards * lib/: util/gauge/stout_utils.h, actions/ferm/qprop/avp_altivecf_solver.cc, actions/ferm/qprop/avp_altivecf_solver.h, actions/ferm/qprop/avp_bgld_solver.cc, actions/ferm/qprop/avp_bgld_solver.h, actions/ferm/qprop/avp_bglf_solver.cc, actions/ferm/qprop/avp_bglf_solver.h, actions/ferm/qprop/quarkprop4_multi_w.h: Added doxygen comments. 2006-12-09 20:55 edwards * tests/regres.pl: Added qqq and qqqNucNuc. 2006-12-09 20:54 edwards * lib/Makefile.am: Removed some obsolete files. 2006-12-09 20:53 edwards * tests/chroma/hadron/: qqq/qqq.metric.xml, qqq/qqq.out.xml, qqq/regres.pl, qqqNucNuc/qqqNucNuc.ini.xml, qqqNucNuc/qqqNucNuc.metric.xml, qqqNucNuc/qqqNucNuc.out.xml, qqqNucNuc/regres.pl: New regression tests. 2006-12-09 18:19 edwards * tests/chroma/hadron/sink_smear/: sink_smearing.ini.xml, sink_smearing.out.xml: Updated. 2006-12-09 17:22 edwards * lib/actions/ferm/linop/klein_gordon_linop_s.cc: Typo fix. 2006-12-09 14:47 edwards * lib/actions/ferm/linop/klein_gordon_linop_s.cc: Fixed -0.5 in linop. 2006-12-09 13:31 edwards * other_libs/Makefile.am: Removed obsolete packages. 2006-12-09 13:30 edwards * aclocal.m4, configure: Induced changes 2006-12-09 13:29 edwards * configure.ac: Removed obsolete options. 2006-12-07 13:36 edwards * tests/chroma/hadron_s/propagator/: klein_gordon.ini.xml, klein_gordon.metric.xml, klein_gordon.out.xml, regres.pl: Added a Klein-Gordon operator. 2006-12-07 13:26 edwards * lib/Makefile.am: Added a klein-gordon fermact and linop. 2006-12-07 13:26 edwards * lib/actions/ferm/: fermacts/fermacts_aggregate_s.cc, fermacts/klein_gordon_fermact_s.cc, fermacts/klein_gordon_fermact_s.h, linop/klein_gordon_linop_s.cc, linop/klein_gordon_linop_s.h: Added a new Klein-Gordon operator. 2006-12-07 13:24 edwards * lib/actions/ferm/invert/syssolver_linop_cg.cc: Added a staggered version. 2006-12-06 11:56 edwards * tests/chroma/hadron/building_blocks/bb-deriv.out.xml: Updated. 2006-12-05 00:04 edwards * tests/chroma/hadron/building_blocks/: bb-baryon.out.xml, bb-deriv.out.xml, bb-meson.out.xml: Updated. 2006-12-05 00:00 edwards * tests/chroma/hadron/seqsource/: seqsource-meson.out.xml, seqsource-derivmeson.out.xml, seqsource-baryon.ini.pl, seqsource-baryon.ini.xml, seqsource-baryon.out.xml, seqsource-photon.out.xml: Updated. 2006-12-04 23:52 edwards * lib/meas/hadron/deriv_meson_seqsrc_w.cc: Fixed signs on the rho_2xYYY seqsources. 2006-12-04 15:43 edwards * tests/chroma/hadron/: building_blocks/bb-baryon.ini.pl, building_blocks/bb-baryon.ini.xml, building_blocks/bb-deriv.ini.pl, building_blocks/bb-deriv.ini.xml, building_blocks/bb-meson.ini.pl, building_blocks/bb-meson.ini.xml, seqsource/seqsource-baryon.ini.pl, seqsource/seqsource-baryon.ini.xml, seqsource/seqsource-derivmeson.ini.pl, seqsource/seqsource-derivmeson.ini.xml, seqsource/seqsource-meson.ini.pl, seqsource/seqsource-meson.ini.xml: Updated regressions. 2006-12-04 15:38 edwards * lib/meas/hadron/: deriv_meson_seqsrc_w.cc, deriv_meson_seqsrc_w.h: Added rho_2xYYY type seqsources. 2006-12-04 15:38 edwards * lib/meas/hadron/simple_meson_seqsrc_w.cc: Changed a0-b0 back to a0-a0_2 2006-12-04 15:38 edwards * lib/meas/hadron/spin_insertion_factory.h: Added doxygen comments. 2006-12-03 22:25 tag chroma3-21-0 2006-12-03 22:25 edwards * tests/chroma/hadron/building_blocks/: bb-deriv.ini.pl, bb-deriv.ini.xml, bb-deriv.out.xml: Updated to use new seqsources. 2006-12-03 16:55 juge * mainprogs/main/group_baryon_run.cc: This replaces gbaryonall2all.cc The subroutines are in group_baryon_operator_w.cc/h A final check on the phases is needed. 2006-12-03 15:33 edwards * lib/meas/hadron/: deriv_meson_seqsrc_w.cc, deriv_meson_seqsrc_w.h: Added more seqsources. Simplified interface by making new bases classes for the A1/A2 and T1/T2/E reps that actually hold the data. 2006-12-03 15:32 edwards * tests/chroma/hadron/seqsource/: seqsource-derivmeson.ini.pl, seqsource-derivmeson.ini.xml, seqsource-derivmeson.out.xml: Added more seqsources. 2006-12-03 12:41 edwards * lib/meas/hadron/: deriv_meson_seqsrc_w.cc, deriv_meson_seqsrc_w.h: Added new seqsrcs. 2006-12-02 16:42 edwards * tests/hmc/: hmc.prec_wilson.log.xml, hmc.prec_wilson.out.xml: Updated. 2006-12-02 16:38 edwards * tests/hmc/: hmc_new.prec_wilson.log.xml, hmc.prec_wilson.out.xml, regres.pl: Updated. 2006-12-02 16:34 edwards * tests/hmc/hmc.prec_wilson.out.xml: Updated 2006-12-02 16:19 edwards * tests/chroma/: eig/eigbnds.out.xml, eig/ritz_Hw-v1.out.xml, gfix/coulgauge/coulgauge.out.xml, glue/fuzwilp/fuzwilp.out.xml, glue/gaugestate/gaugestate.out.xml, glue/wilslp/wilslp.out.xml, hadron/bar3ptfn/bar3ptfn.out.xml, hadron/building_blocks/bb-baryon.out.xml, hadron/building_blocks/bb-deriv.out.xml, hadron/building_blocks/bb-meson.out.xml, hadron/fermstate/fermstate.out.xml, hadron/hadspec/hadspec.out.xml, hadron/make_source/dilute.out.xml, hadron/make_source/make_source.out.xml, hadron/make_source/source-deriv.out.xml, hadron/make_source/source-displace.out.xml, hadron/mesonspec/mesonspec.out.xml, hadron/mres/mres.out.xml, hadron/noisy_building_blocks/nbb.out.xml, hadron/propagator/prec_clover-stout3d.out.xml, hadron/propagator/prec_clover.out.xml, hadron/propagator/prec_dwf.out.xml, hadron/propagator/prec_ht_contfrac5d.out.xml, hadron/propagator/prec_ovext.out.xml, hadron/propagator/prec_ovlap_contfrac5d.out.xml, hadron/propagator/prec_parwilson.out.xml, hadron/propagator/prec_wilson-smearing.out.xml, hadron/propagator/prec_wilson-twisted.out.xml, hadron/propagator/prec_wilson.ferm.out.xml, hadron/propagator/prec_wilson.out.xml, hadron/propagator/prec_zolo_nef.out.xml, hadron/propagator/unprec-ovlap-zolo4d.out.xml, hadron/propagator/unprec-zolo-ev-multi.out.xml, hadron/propagator/unprec_clover.out.xml, hadron/propagator/unprec_dwftransf.out.xml, hadron/propagator/unprec_hamberwu.out.xml, hadron/propagator/unprec_ovext.out.xml, hadron/propagator/unprec_ovlap_contfrac5d.out.xml, hadron/propagator/unprec_zolo_nef.out.xml, hadron/seqsource/seqsource-baryon.out.xml, hadron/seqsource/seqsource-derivmeson.out.xml, hadron/seqsource/seqsource-meson.out.xml, hadron/seqsource/seqsource-photon.out.xml, hadron/sink_smear/sink-deriv.out.xml, hadron/sink_smear/sink-displace.out.xml, hadron/sink_smear/sink_smearing.out.xml, hadron/static_light/static_light.out.xml, hadron/static_light/static_light_pot.out.xml, hadron/stoch_baryon/stoch_baryon.out.xml, hadron/stoch_meson/stoch_meson.out.xml, hadron_s/make_source/make_source_s.out.xml, hadron_s/propagator/asqtad.out.xml, hadron_s/sink_smear/sink_smearing_s.out.xml, hadron_s/spectrum_s/spectrum_s.out.xml, io/nersc_read_obj/nersc_read_obj.out.xml, io/nersc_write_obj/nersc_write_obj.out.xml, io/qio_read_obj/qio_read_obj.out.xml, io/qio_write_obj/qio_write_obj.out.xml, io/szin_read_obj/szin_read_obj.out.xml, io/szin_write_obj/szin_write_obj.out.xml, schrfun/schrfun.out.xml, smear/link_smear/link_smear.out.xml: Updated tests. 2006-12-02 16:14 edwards * mainprogs/main/hmc_new.cc: Changed how Config_info is written. 2006-12-02 16:03 edwards * tests/chroma/: io/nersc_read_obj/nersc_read_obj.out.xml, io/nersc_write_obj/nersc_write_obj.out.xml, io/qio_read_obj/qio_read_obj.out.xml, io/qio_write_obj/qio_write_obj.out.xml, io/szin_read_obj/szin_read_obj.out.xml, io/szin_write_obj/szin_write_obj.out.xml, eig/eigbnds.out.xml, eig/ritz_Hw-v1.out.xml, gfix/coulgauge/coulgauge.out.xml, glue/fuzwilp/fuzwilp.out.xml, glue/gaugestate/gaugestate.out.xml, glue/wilslp/wilslp.out.xml, smear/link_smear/link_smear.out.xml: Updated. 2006-12-02 15:57 edwards * lib/meas/inline/hadron_s/inline_sink_smear_s.cc, scripts/regenerate.csh, tests/chroma/hadron/bar3ptfn/bar3ptfn.ini.xml, tests/chroma/hadron/building_blocks/bb-baryon.metric.xml, tests/chroma/hadron/building_blocks/bb-meson.metric.xml, tests/chroma/hadron/seqsource/seqsource-baryon.metric.xml, tests/chroma/hadron_s/sink_smear/sink_smearing_s.out.xml, tests/chroma/io/qio_read_obj/qio_read_obj.out.xml: Fixes. 2006-12-02 15:51 edwards * scripts/regenerate.csh: Removed dosisms. 2006-12-02 13:29 edwards * lib/io/qprop_io.cc: Removed the old "if path" stuff. 2006-12-02 13:23 edwards * aclocal.m4, configure: Induced changes 2006-12-02 13:22 edwards * configure.ac: Changed to 3.21.0 2006-12-02 13:21 edwards * lib/actions/ferm/linop/lwldslash_w_pab.cc: This is the hacked version I sent to Carsten Urbach. He claimed it worked on the UK QCDOC. Need to check at BNL. 2006-12-02 13:18 edwards * lib/: io/qprop_io.cc, io/qprop_io.h, meas/inline/hadron/inline_make_source_w.cc, meas/inline/hadron/inline_propagator_w.cc, meas/inline/hadron/inline_seqprop_test_w.cc, meas/inline/hadron/inline_seqprop_test_w.h, meas/inline/hadron/inline_seqsource_w.cc, meas/inline/hadron/inline_seqsource_w.h, meas/inline/hadron/inline_sink_smear_w.cc, meas/inline/hadron/inline_sink_smear_w.h, meas/inline/hadron_s/inline_sink_smear_s.cc: Cleaned up and standardized propagator headers. Removed StateInfo. 2006-12-02 13:16 edwards * lib/meas/: hadron/deriv_meson_seqsrc_w.cc, hadron/deriv_meson_seqsrc_w.h, hadron/simple_meson_seqsrc_w.cc, smear/deriv_quark_displacement_w.cc, smear/displace.cc, smear/displace.h: Collected together a unified version of rightNabla, rightD and rightB. Seqsources now appear to all work and have a 2-pt function test. 2006-12-02 13:13 edwards * lib/util/ferm/gammasgn_w.h: Indented. 2006-12-02 13:12 edwards * lib/Makefile.am: Added displace.{h,cc} 2006-12-02 13:12 edwards * mainprogs/main/: chroma.cc, hmc.cc: Added timings and made more uniform the output of Config_info. 2006-12-02 13:10 edwards * tests/chroma/hadron/building_blocks/bb-meson.out.xml: New regression output. 2006-12-02 13:09 edwards * tests/chroma/hadron/building_blocks/: bb.dat.xml, bb.ini.xml, bb.metric.xml, bb.out.xml: Removed - split apart. 2006-12-02 13:08 edwards * tests/chroma/hadron/building_blocks/bb-v2.dat.xml: Removed. 2006-12-02 13:08 edwards * tests/chroma/hadron/building_blocks/: bb-baryon.ini.pl, bb-baryon.ini.xml, bb-baryon.metric.xml, bb-baryon.out.xml, bb-deriv.ini.pl, bb-deriv.ini.xml, bb-deriv.metric.xml, bb-deriv.out.xml, bb-meson.ini.pl, bb-meson.ini.xml, bb-meson.metric.xml, regres.pl: New regression tests. 2006-12-02 12:18 edwards * tests/chroma/hadron/seqsource/: seqsource-meson.ini.pl, seqsource-meson.ini.xml, seqsource-meson.out.xml: Updated again using new naminv convention. 2006-12-01 23:09 edwards * lib/meas/sources/: pt_source_smearing.cc, sh_source_smearing.cc, source_smearing_factory.h: Added LatticeStaggeredPropagator and LatticePropagator versions. 2006-12-01 23:09 edwards * lib/meas/sources/source_const_factory.h: Rerranged order of decls. 2006-12-01 22:51 edwards * tests/chroma/hadron/seqsource/seqsource-photon.out.xml: Updated 2006-12-01 22:48 edwards * tests/chroma/hadron/seqsource/: seqsource-photon.ini.xml, seqsource-photon.out.xml: Changed to sink_mom=100 2006-12-01 22:44 edwards * tests/chroma/hadron/seqsource/: regres.pl, seqsource-baryon.ini.pl, seqsource-baryon.ini.xml, seqsource-baryon.metric.xml, seqsource-baryon.out.xml, seqsource-derivmeson.ini.pl, seqsource-derivmeson.ini.xml, seqsource-derivmeson.metric.xml, seqsource-derivmeson.out.xml, seqsource-meson.ini.csh, seqsource-meson.ini.pl, seqsource-meson.ini.xml, seqsource-meson.out.xml: New regression tests based on looking at the norm2_diff from the 3-pt loopback and a 2-pt evaluation. 2006-11-30 13:59 juge * lib/meas/hadron/group_baryon_operator_w.cc: Previous checkin didn't seem to work. (params.NdilReduce) 2006-11-30 11:48 edwards * tests/chroma/hadron/seqsource/: seqsource-meson.ini.csh, seqsource-meson.ini.xml, seqsource-meson.metric.xml, seqsource-meson.out.xml: New meson regression tests. 2006-11-30 11:42 edwards * tests/chroma/hadron/seqsource/seqsource-meson.ini.xml: New seqsource tests. 2006-11-30 09:32 juge * mainprogs/main/gbaryonall2all.cc: Now contains the routine that takes time-colour-spin dilution to time-dilution. 2006-11-30 09:30 juge * lib/meas/hadron/group_baryon_operator_w.h: Macro defs for removing dilutions were added. This is a temporary solution. The input perl script at the end was also changed... 2006-11-29 13:45 edwards * lib/meas/hadron/deriv_meson_seqsrc_w.cc: Moved base class functions to proper namespace. 2006-11-28 17:19 edwards * lib/meas/hadron/simple_meson_seqsrc_w.cc: Changed name of pion sequential source. 2006-11-28 17:17 edwards * lib/meas/hadron/simple_meson_seqsrc_w.cc: Further fixes. 2006-11-28 15:00 edwards * lib/meas/hadron/: simple_baryon_seqsrc_w.cc, simple_baryon_seqsrc_w.h, simple_meson_seqsrc_w.cc: More 2-pt support. 2006-11-28 15:00 edwards * lib/meas/inline/hadron/inline_seqprop_test_w.cc: Fixed a "push" and removed some debugging. 2006-11-28 14:30 edwards * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_seqprop_test_w.cc, inline_seqprop_test_w.h: New inline seqprop test. 2006-11-28 14:30 edwards * lib/meas/inline/hadron/inline_seqsource_w.h: Changed doxygen comment. 2006-11-28 14:30 edwards * lib/meas/inline/hadron/: inline_qpropadd_w.cc, inline_qpropadd_w.h: Made new factorA and factorB inputs, so now the code can compute propC = factorA*propA + factorB*propB 2006-11-28 14:28 edwards * lib/meas/hadron/: deriv_meson_seqsrc_w.h, hadron_seqsource.cc, hadron_seqsource.h, photon_seqsrc_w.h, simple_baryon_seqsrc_w.cc, simple_baryon_seqsrc_w.h, simple_meson_seqsrc_w.cc, simple_meson_seqsrc_w.h: Added a tieBack and twoPtSink function to HadronSeqSource. 2006-11-28 14:28 edwards * lib/meas/hadron/: barhqlq_w.cc, barhqlq_w.h: Made the 2-pt contractions visible in their own new namespace. 2006-11-28 14:27 edwards * lib/io/qprop_io.cc: Changed PropSinkSmear output name to PropSink. This has been causing havoc since the reader/writer have been inconsistent!! 2006-11-28 14:26 edwards * lib/io/qprop_io.h: Added comment 2006-11-28 14:26 edwards * lib/Makefile.am: Added inline_seqprop_test_w.{h,cc} 2006-11-28 11:58 bjoo * tests/regres.pl: oops again 2006-11-28 11:58 bjoo * tests/regres.pl: Redid autofiles 2006-11-28 11:51 bjoo * tests/regres.pl: Oops 2006-11-28 11:51 bjoo * aclocal.m4, configure: Remade autofiles 2006-11-28 11:49 bjoo * aclocal.m4, configure, lib/Makefile.am, lib/update/molecdyn/hmc/abs_hmc_new.h, lib/update/molecdyn/hmc/hmc.h, lib/update/molecdyn/hmc/lcm_hmc_new.h, lib/update/molecdyn/integrator/integrator.h, lib/update/molecdyn/integrator/lcm_toplevel_integrator.cc, lib/update/molecdyn/integrator/lcm_toplevel_integrator.h, mainprogs/main/Makefile.am, mainprogs/main/hmc_new.cc, tests/regres.pl: New HMC program 2006-11-28 11:45 bjoo * tests/hmc/: hmc_new.prec_wilson.ini.xml, hmc_new.prec_wilson.log.xml, hmc_new.prec_wilson.metric.xml, regres.pl: Added tests for new HMC 2006-11-28 09:08 bjoo * lib/meas/hadron/group_baryon_operator_w.cc: Merged with latest head revision. 2006-11-28 09:02 bjoo * lib/meas/inline/io/qio_read_obj_funcmap.cc: Added single prec writing functions 2006-11-27 15:13 edwards * tests/chroma/hadron/building_blocks/: bb-deriv.out.xml, bb.ini.xml, bb.out.xml: Updated tests. 2006-11-27 15:09 edwards * lib/meas/hadron/baryon_seqsrc_w.cc: Bug fix. Now have a call to gamma5Herm() before the sink projection. 2006-11-27 15:08 edwards * lib/meas/hadron/hadron_seqsource.cc: Split off phase stuff to a call to singlePhase(). 2006-11-27 15:07 edwards * lib/util/: ferm/gamma5_herm_w.cc, ferm/gamma5_herm_w.h, ft/ft.h, ft/single_phase.cc, ft/single_phase.h: New support routines. 2006-11-27 15:07 edwards * lib/Makefile.am: Added gamma5_herm_w.{h,cc} and single_phase.{h,cc} 2006-11-27 15:06 edwards * lib/meas/inline/hadron/inline_building_blocks_w.cc: Added some additional debugging. 2006-11-27 15:05 edwards * lib/meas/hadron/meson_seqsrc_w.cc: Removed unused code. 2006-11-27 00:52 edwards * lib/meas/hadron/simple_meson_seqsrc_w.cc: Added a conj() of phases() 2006-11-27 00:51 edwards * tests/chroma/hadron/seqsource/: seqsource-meson.ini.xml, seqsource-meson.out.xml: Updated to new sequential sources. 2006-11-27 00:30 edwards * tests/chroma/hadron/building_blocks/bb-deriv.metric.xml: Changed precision. 2006-11-27 00:21 juge * mainprogs/main/gbaryonall2all.cc: Quark orderings were not in sync with the Chroma_Input.txt file. 2006-11-26 23:33 edwards * lib/: Makefile.am, meas/hadron/barseqsrc_w.cc, meas/hadron/barseqsrc_w.h, meas/hadron/baryon_seqsrc_w.cc, meas/hadron/baryon_seqsrc_w.h, meas/hadron/deriv_meson_seqsrc_w.cc, meas/hadron/deriv_meson_seqsrc_w.h, meas/hadron/derivmesonseqsrc_w.cc, meas/hadron/derivmesonseqsrc_w.h, meas/hadron/hadron_seqsource.cc, meas/hadron/hadron_seqsource.h, meas/hadron/hadron_w.h, meas/hadron/meson_seqsrc_w.cc, meas/hadron/meson_seqsrc_w.h, meas/hadron/mesonseqsrc_w.cc, meas/hadron/mesonseqsrc_w.h, meas/hadron/photon_seqsrc_w.cc, meas/hadron/photon_seqsrc_w.h, meas/hadron/seqsource_aggregate_w.cc, meas/hadron/simple_baryon_seqsrc_w.cc, meas/hadron/simple_baryon_seqsrc_w.h, meas/hadron/simple_meson_seqsrc_w.cc, meas/hadron/simple_meson_seqsrc_w.h, meas/inline/hadron/inline_building_blocks_w.cc: Overhauled sequential sources. The meson-derivatives appear to work, but need some more tests of baryons and other mesons. 2006-11-26 23:31 edwards * lib/meas/inline/hadron_s/: inline_apply_fermstate_s.cc, inline_apply_fermstate_s.h, inline_hadron_aggregate_s.cc: Added staggered fermstates. 2006-11-26 23:29 edwards * tests/chroma/hadron/building_blocks/: bb.ini.xml, bb.out.xml: Changed input to write all to xmldat. 2006-11-26 23:27 edwards * tests/chroma/hadron/building_blocks/: bb-deriv.ini.xml, bb-deriv.metric.xml, bb.dat.xml: New regression tests. 2006-11-26 22:54 edwards * tests/chroma/hadron/building_blocks/: bb-deriv.ini.xml, bb-deriv.out.xml, regres.pl: New regression tests. 2006-11-26 21:56 juge * mainprogs/main/gbaryonall2all.cc: Compile the program that makes the source operator and sink operator separately now by #define's in the main program. 2006-11-26 20:28 juge * mainprogs/main/gbaryonall2all.cc: The source and sink operators can be made in different runs now. (there may not be enough disk space to accommodate both operators at the same time) 2006-11-26 19:58 juge * lib/meas/hadron/group_baryon_operator_w.cc: The complex conjugation of the creation operator coefficients are taken at the correlator level. 2006-11-25 14:44 tag chroma3-20-0 2006-11-25 14:44 edwards * NEWS: Info on 3.20.0 2006-11-23 16:55 juge * mainprogs/main/gbaryonall2all.cc: The first set of signs is correct ... 2006-11-23 11:17 edwards * lib/meas/hadron/simple_baryon_operator_w.h: Added a hack operator() to deal with Jimmy's hack in the base class. 2006-11-21 23:20 juge * mainprogs/main/gbaryonall2all.cc: Subsets are used to make the contraction at the source faster. 2006-11-21 23:17 juge * lib/meas/hadron/: baryon_operator.h, baryon_operator_factory_w.h, group_baryon_operator_w.cc, group_baryon_operator_w.h, simple_baryon_operator_w.cc: The contraction at the source is faster now if eigenvectors are not used. 2006-11-21 14:45 edwards * lib/meas/sources/mom_source_const.cc: Added sanity check of mom.size(). 2006-11-21 14:36 edwards * lib/meas/hadron/npr_vertex_w.cc: Bug fix - only gamma_5 adjoint B at the top level. 2006-11-21 13:42 edwards * lib/meas/hadron/npr_vertex_w.cc: Inserted missing "pop" in writing "Vertex". 2006-11-21 09:34 bjoo * other_libs/cg-dwf/: aclocal.m4, configure, configure.ac: Added -mbluelight flag to the BG/L build 2006-11-21 00:20 kostas * lib/: meas/smear/quark_displacement_aggregate.cc, meas/smear/quark_flavor_s.cc, meas/smear/quark_flavor_s.h, util/ferm/staggered_operators_s.cc, util/ferm/staggered_operators_s.h: compiles and runs... 2006-11-20 23:07 edwards * lib/meas/inline/hadron/inline_apply_fermstate_w.h: Changed doxygen comments. 2006-11-20 17:22 kostas * lib/meas/smear/quark_displacement_aggregate.cc: [no log message] 2006-11-20 17:13 kostas * aclocal.m4, lib/Makefile.am, lib/meas/smear/quark_flavor_s.cc, lib/meas/smear/quark_flavor_s.h: flavored source 2006-11-20 16:02 bjoo * lib/actions/ferm/qprop/: avp_inverter_interface.h, eoprec_dwf_qprop_array_cg_dwf_w.h: Added timing calls around the AVP interface 2006-11-20 14:43 bjoo * aclocal.m4, configure: Re autoconfiscated with automake192 2006-11-20 14:27 bjoo * tests/t_leapfrog/t_leapfrog_component.prec_wilson.ini.xml: New Way 2006-11-20 14:25 bjoo * aclocal.m4, configure, lib/Makefile.am, mainprogs/tests/t_leapfrog_component.cc: Checked in new MD Stuff 2006-11-20 14:15 bjoo * lib/update/molecdyn/integrator/: abs_integrator.h, integrator_shared.cc, integrator_shared.h, lcm_exp_sdt.cc, lcm_exp_sdt.h, lcm_exp_tdt.cc, lcm_exp_tdt.h, lcm_integrator_leaps.cc, lcm_integrator_leaps.h, lcm_min_norm2_recursive.cc, lcm_min_norm2_recursive.h, lcm_sts_leapfrog_recursive.cc, lcm_sts_leapfrog_recursive.h, lcm_toplevel_integrator.h, md_integrator_factory.h: Added in parallel structure for new way of doing things 2006-11-20 14:12 bjoo * lib/update/molecdyn/hamiltonian/: abs_hamiltonian.h, exact_hamiltonian.cc, exact_hamiltonian.h: Added parallel chain for new way of doing things 2006-11-20 11:22 edwards * lib/util/ferm/transf.cc: Fixed double prec. CvToFerm with colorvec -> stag-ferm. 2006-11-19 11:35 edwards * mainprogs/tests/t_disc_loop_s.cc: Fixed struct names to compile. 2006-11-19 08:10 juge * lib/meas/hadron/group_baryon_operator_w.cc: term_q.disp_len was already stored as negative for sources. 2006-11-19 07:34 juge * mainprogs/main/gbaryonall2all.cc: Smearing at the sink is only done once now for speed. 2006-11-19 00:01 kostas * lib/: Makefile.am, util/ferm/staggered_operators_s.cc: compiles 2006-11-18 23:59 edwards * mainprogs/tests/t_propagator_s.cc: Fixes to make compile. 2006-11-18 23:42 kostas * lib/util/ferm/staggered_operators_s.cc: needs debugging 2006-11-18 02:39 kostas * lib/util/ferm/: staggered_operators_s.cc, staggered_operators_s.h: almost done... 2006-11-18 01:43 juge * lib/meas/hadron/: group_baryon_operator_w.cc, group_baryon_operator_w.h: GroupBaryonOp has been cleaned up and smearing has been put in for both quark and gauge. 2006-11-18 00:55 juge * mainprogs/main/gbaryonall2all.cc: Quark and Gauge Link smearing added. 2006-11-18 00:41 kostas * lib/util/ferm/: staggered_operators_s.cc, staggered_operators_s.h: first pass 2006-11-17 23:56 kostas * lib/meas/inline/hadron/inline_stag_to_wils.cc: touch up 2006-11-17 23:40 kostas * aclocal.m4, lib/Makefile.am, lib/actions/ferm/qprop/quarkprop4_s.cc, lib/meas/inline/hadron/inline_hadron_aggregate.cc, lib/meas/inline/hadron/inline_stag_to_wils.cc, lib/meas/inline/hadron/inline_stag_to_wils.h: added new task 2006-11-17 21:48 kostas * lib/actions/ferm/invert/invcg1.cc: [no log message] 2006-11-17 21:46 kostas * lib/actions/ferm/qprop/eoprec_staggered_qprop.h: fixed true residual 2006-11-17 21:33 kostas * lib/actions/ferm/linop/: asq_dsl_s.cc, asqtad_linop_s.cc: added flop count 2006-11-17 16:03 kostas * lib/actions/ferm/invert/invcg1.cc, lib/actions/ferm/qprop/eoprec_staggered_qprop.h, other_libs/cg-dwf/aclocal.m4: [no log message] 2006-11-17 11:23 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Added printout of xml_file 2006-11-17 11:20 edwards * tests/chroma/hadron/mres/mres.out.xml: Updated output. 2006-11-17 09:39 edwards * lib/meas/inline/hadron_s/inline_spectrum_s.cc, mainprogs/tests/t_disc_loop_s.cc, mainprogs/tests/t_propagator_s.cc: Added fixes for new use of Asqtad fermact. 2006-11-17 09:23 bjoo * other_libs/cg-dwf/: acinclude.m4, aclocal.m4, cg-dwf-config-internal.h.in, cg-dwf-config.in, configure, configure.ac: Fixed some autoconf magic and the cg-dwf-config.in script 2006-11-16 21:55 edwards * lib/meas/smear/: deriv_quark_displacement_s.cc, deriv_quark_displacement_s.h, quark_displacement_aggregate.cc: Added staggered derivatives/displacements. 2006-11-16 21:54 edwards * lib/actions/ferm/linop/: asqtad_linop_s.cc, asqtad_linop_s.h: Added call to nflops, but currently returns 0. 2006-11-16 21:53 edwards * lib/Makefile.am: Added deriv_quark_displacement_s.* 2006-11-16 21:53 edwards * tests/chroma/hadron_s/make_source/: make_source_s.ini.xml, make_source_s.metric.xml, make_source_s.out.xml: Updated test. 2006-11-16 21:17 edwards * lib/: actions/boson/operator/klein_gord.cc, actions/boson/operator/klein_gord.h, actions/ferm/fermacts/asqtad_fermact_s.cc, actions/ferm/fermacts/asqtad_fermact_s.h, actions/ferm/fermacts/fermact_factory_s.h, actions/ferm/fermacts/fermacts_aggregate_s.cc, actions/ferm/fermacts/fermacts_aggregate_s.h, actions/ferm/fermacts/fermacts_s.h, actions/ferm/fermstates/ferm_createstate_aggregate_s.h, meas/inline/hadron/inline_mres_w.cc, meas/inline/hadron/inline_qpropqio_w.cc, meas/inline/hadron/inline_qqbar_w.cc, meas/inline/hadron/inline_qqq_w.cc, meas/inline/hadron_s/hadron_s.h, meas/inline/hadron_s/inline_hadron_aggregate_s.cc, meas/inline/hadron_s/inline_make_source_s.cc, meas/inline/hadron_s/inline_make_source_s.h, meas/inline/hadron_s/inline_propagator_s.cc, meas/inline/hadron_s/inline_propagator_s.h, meas/inline/hadron_s/inline_sink_smear_s.cc, meas/inline/hadron_s/inline_sink_smear_s.h, meas/inline/hadron_s/inline_spectrum_s.cc, meas/sinks/pt_sink_smearing.cc, meas/sinks/sh_sink_smearing.cc, meas/sinks/sink_smearing_factory.h, meas/smear/gaus_quark_smearing.cc, meas/smear/gaus_smear.cc, meas/smear/gaus_smear.h, meas/smear/no_quark_displacement.cc, meas/smear/no_quark_smearing.cc, meas/smear/quark_displacement_factory.h, meas/smear/quark_smearing_factory.h, meas/smear/simple_quark_displacement.cc, meas/sources/pt_source_const.cc, meas/sources/sh_source_const.cc, meas/sources/source_const_factory.h: Added staggered support in a new make_source, propagator, sink_smearing chain. Fixed up asqtad_fermact to fit in this model. 2006-11-16 21:14 edwards * configure.ac: Changed to 3.20.0 2006-11-16 21:14 edwards * aclocal.m4, configure: Induced changes 2006-11-16 21:11 edwards * lib/Makefile.am: Added staggered versions of make_source, propagator, and sink_smearing. 2006-11-16 21:10 edwards * tests/: regres.pl, chroma/hadron_s/make_source/make_source_s.ini.xml, chroma/hadron_s/make_source/make_source_s.metric.xml, chroma/hadron_s/make_source/make_source_s.out.xml, chroma/hadron_s/make_source/regres.pl, chroma/hadron_s/propagator/asqtad.ini.xml, chroma/hadron_s/propagator/asqtad.metric.xml, chroma/hadron_s/propagator/asqtad.out.xml, chroma/hadron_s/propagator/regres.pl, chroma/hadron_s/sink_smear/sink_smearing_s.ini.xml, chroma/hadron_s/sink_smear/sink_smearing_s.metric.xml, chroma/hadron_s/sink_smear/sink_smearing_s.out.xml, chroma/hadron_s/sink_smear/regres.pl: New staggered regression tests. 2006-11-16 15:39 bjoo * lib/: Makefile.am, actions/ferm/linop/lwldslash_array_pab_w.cc, actions/ferm/linop/lwldslash_w_pab.cc, io/monomial_io.cc, io/monomial_io.h, update/molecdyn/hamiltonian/abs_hamiltonian.h: Added Timing Hacks 2006-11-16 15:39 bjoo * lib/actions/ferm/invert/: invcg2_timing_hacks.cc, invcg2_timing_hacks.h, syssolver_linop_aggregate.cc, syssolver_linop_cg_timing.cc, syssolver_linop_cg_timing.h, syssolver_mdagm_aggregate.cc, syssolver_mdagm_cg_timing.cc, syssolver_mdagm_cg_timing.h: Timing Hacks 2006-11-16 14:49 kostas * lib/actions/ferm/fermacts/: asqtad_fermact_params_s.cc, asqtad_fermact_params_s.h: asqtad parameters 2006-11-09 22:10 edwards * lib/meas/sources/mom_source_const.cc: Changed walfil call to an internal call for a boxfil. 2006-11-09 21:37 edwards * lib/meas/hadron/group_baryon_operator_w.cc: Commented out debugging comment in registration. 2006-11-08 18:54 bjoo * lib/Makefile.am: Makefile.am etc 2006-11-08 18:51 bjoo * tests/t_leapfrog/t_leapfrog_component.prec_wilson.ini.xml: modified component ini file 2006-11-08 18:48 bjoo * lib/update/molecdyn/integrator/: lcm_sts_leapfrog_component.cc, lcm_sts_leapfrog_component.h: I removed the component versions now that the recursive versions can cope with a base case 2006-11-08 18:46 bjoo * lib/update/molecdyn/integrator/: integrator_aggregate.cc, lcm_min_norm2_recursive.cc, lcm_min_norm2_recursive.h, lcm_sts_leapfrog_component.cc, lcm_sts_leapfrog_recursive.cc: Minimum norm integrators 2006-11-07 21:47 edwards * tests/regres.pl: Added static_light regression tests. 2006-11-07 21:46 edwards * tests/chroma/hadron/static_light/: static_light.dat.xml, static_light.metric.xml, static_light.out.xml, static_light_pot.dat.xml, static_light_pot.metric.xml, static_light_pot.out.xml: New regression tests. 2006-11-07 18:16 bjoo * configure, lib/update/molecdyn/hmc/abs_hmc.h, mainprogs/tests/t_leapfrog.cc, tests/t_leapfrog/t_leapfrog_component.prec_wilson.ini.xml: commit of Makefile.ins 2006-11-07 18:16 bjoo * aclocal.m4, lib/Makefile.am, mainprogs/tests/Makefile.am: commit of Makefile.am etc 2006-11-07 18:14 bjoo * tests/t_leapfrog/t_leapfrog_component.prec_wilson.log.xml: Test Files for Component integrator program t_leapfrog_component 2006-11-07 18:12 bjoo * mainprogs/tests/t_leapfrog_component.cc: New t-leapfrog for component inegrator testing 2006-11-07 18:11 edwards * tests/chroma/hadron/static_light/regres.pl: Added tests. 2006-11-07 18:11 bjoo * lib/update/molecdyn/integrator/: abs_integrator.h, integrator_aggregate.cc, integrator_aggregate.h, lcm_exp_sdt.cc, lcm_exp_sdt.h, lcm_exp_tdt.cc, lcm_exp_tdt.h, lcm_minimum_norm2_integrator.h, lcm_minimum_norm2_integrator_mts.h, lcm_minimum_norm2_qpq_integrator_mts.h, lcm_pqp_leapfrog_mts.h, lcm_sexton_weingarten.h, lcm_sts_leapfrog_component.cc, lcm_sts_leapfrog_component.h, lcm_sts_leapfrog_recursive.cc, lcm_sts_leapfrog_recursive.h, md_integrator_factory.h: New Integrator bits 2006-11-07 18:09 edwards * tests/chroma/hadron/static_light/: static_light.metric.xml, static_light_pot.metric.xml: Fixed tests. 2006-11-07 17:36 edwards * mainprogs/main/propagator_comp.cc: Removed Log info. 2006-11-07 16:50 edwards * mainprogs/: tests/t_formfac.cc, tests/t_mesons_w.cc, main/collect_multi_propcomp.cc, main/multi_propagator_comp.cc: Removed Log stuff. 2006-11-07 16:40 edwards * mainprogs/main/Makefile.am: Demoted some programs to check_PROGRAMS instead of bin_PROGRAMS. They are not in active use and just take up disk space. They are built as a part of make check. 2006-11-07 00:26 tag chroma3-19-1 2006-11-07 00:26 edwards * aclocal.m4, configure: Induced changes 2006-11-07 00:25 edwards * configure.ac: Changed to 3.19.1 2006-11-07 00:25 edwards * NEWS: Info on 3.19.1 2006-11-07 00:22 edwards * lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.h: Fixed adding of cg counts to res.n_count - sum both single and double. 2006-11-06 23:02 edwards * tests/chroma/hadron/static_light/static_light.metric.xml: First pass - not finished yet. 2006-11-06 12:22 juge * mainprogs/main/gbaryonall2all.cc: Driver file which works without any smearing. 2006-11-06 12:14 juge * lib/meas/hadron/: group_baryon_operator_w.cc, group_baryon_operator_w.h: Input has changed (as well as the perl script that makes the input file). This version appears to work if I leave out the smearings. 2006-11-04 00:38 edwards * README: Small update on current versions. 2006-11-04 00:12 edwards * lib/meas/sources/mom_source_const.cc: Fixes. No compiles. 2006-11-04 00:08 edwards * lib/Makefile.am: Added mom_source_const.{h,cc} 2006-11-04 00:06 edwards * lib/meas/inline/hadron/inline_hadron_aggregate.cc: Added Npr vertex. 2006-11-04 00:04 edwards * lib/meas/sources/source_const_aggregate.cc: Added momentum-wall. 2006-11-03 23:42 edwards * lib/meas/hadron/npr_vertex_w.cc: Fixed write of scalar. 2006-11-03 15:21 hwlin * lib/meas/inline/hadron/inline_npr_w.h: Induced Changes 2006-11-03 15:18 hwlin * lib/: Makefile.am, meas/hadron/npr_vertex_w.h, meas/hadron/npr_vertex_w.cc, meas/inline/hadron/inline_npr_vertex_w.cc: Added npr_vertex.xx and inline_npr_vertex_w.xx to the build and made them compile. There is a QIO annoyance left in npr_vertex_w.cc where we want to IO just one sites worth of propagator. 2006-11-03 10:22 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Added another clover term variant. 2006-11-02 17:29 edwards * lib/meas/inline/hadron/inline_npr_vertex_w.cc: Changed named of task. 2006-11-02 17:26 edwards * lib/meas/: hadron/npr_vertex_w.cc, hadron/npr_vertex_w.h, inline/hadron/inline_npr_vertex_w.cc, inline/hadron/inline_npr_vertex_w.h: Near complete version - not yet tested or compiled. 2006-11-02 14:24 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Added unrolled version of clover term. 2006-10-31 23:42 edwards * lib/meas/hadron/group_baryon_operator_w.cc: Removed some debugging. Indented some. 2006-10-31 16:10 bjoo * install_scripts/chroma-3.17.spec: Added SPECS file for building scalar RPM 2006-10-31 10:01 tag chroma3-19-0 2006-10-31 10:01 edwards * NEWS: Info on 3.19.0 2006-10-31 10:00 edwards * NEWS: Info on 3.18.0 2006-10-30 17:32 edwards * lib/meas/hadron/npr_vertex_w.h: Fix. 2006-10-30 17:31 edwards * lib/meas/: hadron/npr_vertex_w.cc, hadron/npr_vertex_w.h, inline/hadron/inline_npr_vertex_w.cc, inline/hadron/inline_npr_vertex_w.h: First versions of NPR code. 2006-10-30 16:59 edwards * lib/meas/sources/: mom_source_const.cc, mom_source_const.h, source_const_aggregate.cc: Added momentum wall sources. 2006-10-28 01:13 kostas * lib/meas/inline/hadron/: inline_npr_w.cc, inline_npr_w.h: bit more.. 2006-10-28 00:42 kostas * lib/meas/inline/hadron/: inline_npr_w.cc, inline_npr_w.h: little more progress 2006-10-27 00:12 kostas * lib/meas/inline/hadron/: inline_npr_w.cc, inline_npr_w.h: added the make source bit for the derivative source 2006-10-26 23:02 juge * lib/meas/hadron/group_baryon_operator_w.h: disp_ind added to QuarkTerm_t to index disp_quarks. 2006-10-26 23:01 juge * lib/meas/hadron/group_baryon_operator_w.cc: disp_ind added to QuarkTerm_t for use with disp_quarks. 2006-10-26 17:20 kostas * lib/meas/inline/hadron/: inline_npr_w.cc, inline_npr_w.h: initial version 2006-10-26 00:36 kostas * lib/meas/hadron/BuildingBlocks_w.cc: Fixed up the translation flag. Code is working on free field 2006-10-24 17:58 edwards * lib/meas/hadron/group_baryon_operator_w.cc: Changed debugging comments to use QDPIO::cout instead of just cout. 2006-10-24 00:45 edwards * lib/actions/ferm/invert/minvcg.cc: Added memory hints. 2006-10-24 00:32 edwards * lib/actions/ferm/invert/minvcg.cc: Make sure to stop timer in trivial case. 2006-10-24 00:23 edwards * lib/actions/ferm/invert/minvcg.cc: Added timing and flopcount. 2006-10-23 14:03 juge * lib/meas/hadron/group_baryon_operator_w.cc: The source file with only one term in the sink operator. Not complete yet. 2006-10-23 14:02 juge * lib/meas/hadron/group_baryon_operator_w.h: Newer version with only one term for the sink operator. (and other corrections) 2006-10-23 14:00 juge * mainprogs/main/gbaryonall2all.cc: A template file for the driver for all-to-all group baryon operators program. 2006-10-22 17:31 edwards * lib/update/molecdyn/monomial/eoprec_constdet_one_flavor_rat_monomial_w.cc: Removed debugging cout statement. 2006-10-20 17:29 edwards * tests/chroma/hadron/propagator/: prec_clover-stout3d.metric.xml, prec_clover-stout3d.out.xml, regres.pl: Added stout smear state. 2006-10-20 12:57 edwards * lib/util/gauge/stout_utils.cc: Removed diagnostic comment. 2006-10-19 13:42 edwards * lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.h: More pathname fixes. 2006-10-19 13:39 edwards * lib/actions/ferm/qprop/dwf_qpropt_w.h: Pathname fixes. 2006-10-19 13:36 edwards * lib/: actions/ferm/fermacts/fermacts_aggregate_w.cc, actions/ferm/qprop/asqtad_qprop.h, actions/ferm/qprop/dwf_fermact_qprop_array_w.cc, actions/ferm/qprop/staggered_qprop.cc, update/molecdyn/monomial/monomial_aggregate_w.cc: Pathname fixes. 2006-10-19 12:02 edwards * aclocal.m4, configure: Induced changes 2006-10-19 12:01 edwards * configure, configure.ac, lib/Makefile.am, lib/eo_linop.h, lib/eo_prec_linop.h, lib/eoprec_constdet_linop.h, lib/eoprec_constdet_wilstype_fermact_w.h, lib/eoprec_linop.h, lib/eoprec_logdet_linop.h, lib/eoprec_logdet_wilstype_fermact_w.h, lib/eoprec_wilstype_fermact_w.h, lib/fermact.h, lib/fermact.orig.h, lib/lib.h, lib/linearop.h, lib/lmdagm.h, lib/polyfermact.h, lib/prec_constdet_linop.h, lib/prec_logdet_linop.h, lib/stagtype_fermact_s.h, lib/teoprec_linop.h, lib/teoprec_logdet_linop.h, lib/tprec_linop.h, lib/tprec_logdet_linop.h, lib/tpreclinop.h, lib/unprec_wilstype_fermact_w.h, lib/wilstype_fermact_w.h, lib/wilstype_polyfermact_w.h, lib/actions/ferm/fermacts/asqtad_fermact_s.h, lib/actions/ferm/fermacts/eoprec_clover_extfield_fermact_w.cc, lib/actions/ferm/fermacts/eoprec_clover_extfield_fermact_w.h, lib/actions/ferm/fermacts/eoprec_clover_fermact_w.cc, lib/actions/ferm/fermacts/eoprec_clover_fermact_w.h, lib/actions/ferm/fermacts/eoprec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/eoprec_dwf_fermact_base_array_w.h, lib/actions/ferm/fermacts/eoprec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/eoprec_kno_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_kno_fermact_array_w.h, lib/actions/ferm/fermacts/eoprec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/eoprec_ovdwf_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_ovdwf_fermact_array_w.h, lib/actions/ferm/fermacts/eoprec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/eoprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/eoprec_parwilson_fermact_w.cc, lib/actions/ferm/fermacts/eoprec_parwilson_fermact_w.h, lib/actions/ferm/fermacts/eoprec_slic_fermact_w.cc, lib/actions/ferm/fermacts/eoprec_slic_fermact_w.h, lib/actions/ferm/fermacts/eoprec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/eoprec_wilson_fermact_w.h, lib/actions/ferm/fermacts/eoprec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/eoprec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermacts/fermact_factory_w.h, lib/actions/ferm/fermacts/fermacts_w.h, lib/actions/ferm/fermacts/overlap_fermact_base_w.h, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.h, lib/actions/ferm/fermacts/poly_cheb_fermact_w.h, lib/actions/ferm/fermacts/prec_clover_extfield_fermact_w.cc, lib/actions/ferm/fermacts/prec_clover_extfield_fermact_w.h, lib/actions/ferm/fermacts/prec_clover_fermact_w.cc, lib/actions/ferm/fermacts/prec_clover_fermact_w.h, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_dwf_fermact_base_array_w.h, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.h, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovdwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovdwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_parwilson_fermact_w.cc, lib/actions/ferm/fermacts/prec_parwilson_fermact_w.h, lib/actions/ferm/fermacts/prec_slic_fermact_w.cc, lib/actions/ferm/fermacts/prec_slic_fermact_w.h, lib/actions/ferm/fermacts/prec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/prec_wilson_fermact_w.h, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermacts/stag_fermact_s.h, lib/actions/ferm/fermacts/tprec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/tprec_wilson_fermact_w.h, lib/actions/ferm/fermacts/unprec_clover_fermact_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_base_array_w.h, lib/actions/ferm/fermacts/unprec_dwftransf_fermact_w.h, lib/actions/ferm/fermacts/unprec_hamberwu_fermact_w.h, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovdwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_parwilson_fermact_w.h, lib/actions/ferm/fermacts/unprec_w12_fermact_w.h, lib/actions/ferm/fermacts/unprec_wilson_fermact_w.h, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.h, lib/actions/ferm/linop/asqtad_linop_s.h, lib/actions/ferm/linop/eoprec_clover_extfield_linop_w.cc, lib/actions/ferm/linop/eoprec_clover_extfield_linop_w.h, lib/actions/ferm/linop/eoprec_clover_linop_w.cc, lib/actions/ferm/linop/eoprec_clover_linop_w.h, lib/actions/ferm/linop/eoprec_dwf_linop_array_w.cc, lib/actions/ferm/linop/eoprec_dwf_linop_array_w.h, lib/actions/ferm/linop/eoprec_dwflike_linop_base_array_w.h, lib/actions/ferm/linop/eoprec_ht_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/eoprec_ht_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/eoprec_nef_general_linop_array_w.cc, lib/actions/ferm/linop/eoprec_nef_general_linop_array_w.h, lib/actions/ferm/linop/eoprec_nef_linop_array_w.cc, lib/actions/ferm/linop/eoprec_nef_linop_array_w.h, lib/actions/ferm/linop/eoprec_ovdwf_linop_array_w.cc, lib/actions/ferm/linop/eoprec_ovdwf_linop_array_w.h, lib/actions/ferm/linop/eoprec_ovext_linop_array_w.cc, lib/actions/ferm/linop/eoprec_ovext_linop_array_w.h, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_linop_array_opt_w.cc, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_linop_array_opt_w.h, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_linop_base_array_w.cc, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_linop_base_array_w.h, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_pv_linop_array_w.cc, lib/actions/ferm/linop/eoprec_ovlap_contfrac5d_pv_linop_array_w.h, lib/actions/ferm/linop/eoprec_parwilson_linop_w.cc, lib/actions/ferm/linop/eoprec_parwilson_linop_w.h, lib/actions/ferm/linop/eoprec_slic_linop_w.cc, lib/actions/ferm/linop/eoprec_slic_linop_w.h, lib/actions/ferm/linop/eoprec_wilson_linop_w.cc, lib/actions/ferm/linop/eoprec_wilson_linop_w.h, lib/actions/ferm/linop/lDeltaLs_w.h, lib/actions/ferm/linop/lg5eps_double_pass_w.h, lib/actions/ferm/linop/lg5eps_w.h, lib/actions/ferm/linop/linop_w.h, lib/actions/ferm/linop/lovddag_double_pass_w.h, lib/actions/ferm/linop/lovddag_w.h, lib/actions/ferm/linop/lovlap_double_pass_w.h, lib/actions/ferm/linop/lovlapms_w.h, lib/actions/ferm/linop/ovlap_contfrac5d_w.h, lib/actions/ferm/linop/prec_clover_extfield_linop_w.cc, lib/actions/ferm/linop/prec_clover_extfield_linop_w.h, lib/actions/ferm/linop/prec_clover_linop_w.cc, lib/actions/ferm/linop/prec_clover_linop_w.h, lib/actions/ferm/linop/prec_dwf_linop_array_w.cc, lib/actions/ferm/linop/prec_dwf_linop_array_w.h, lib/actions/ferm/linop/prec_dwflike_linop_base_array_w.h, lib/actions/ferm/linop/prec_ht_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/prec_ht_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/prec_nef_general_linop_array_w.cc, lib/actions/ferm/linop/prec_nef_general_linop_array_w.h, lib/actions/ferm/linop/prec_nef_linop_array_w.cc, lib/actions/ferm/linop/prec_nef_linop_array_w.h, lib/actions/ferm/linop/prec_ovdwf_linop_array_w.cc, lib/actions/ferm/linop/prec_ovdwf_linop_array_w.h, lib/actions/ferm/linop/prec_ovext_linop_array_w.cc, lib/actions/ferm/linop/prec_ovext_linop_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_opt_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_opt_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_base_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_base_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_pv_linop_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_pv_linop_array_w.h, lib/actions/ferm/linop/prec_parwilson_linop_w.cc, lib/actions/ferm/linop/prec_parwilson_linop_w.h, lib/actions/ferm/linop/prec_slic_linop_w.cc, lib/actions/ferm/linop/prec_slic_linop_w.h, lib/actions/ferm/linop/prec_wilson_linop_w.cc, lib/actions/ferm/linop/prec_wilson_linop_w.h, lib/actions/ferm/linop/tprec_wilson_linop_w.cc, lib/actions/ferm/linop/tprec_wilson_linop_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_nonhermop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_pv_linop_array_w.h, lib/actions/ferm/linop/unprec_pdwf4d_linop_w.h, lib/actions/ferm/linop/unprec_ppdwf4d_linop_w.h, lib/actions/ferm/qprop/dwf_qpropt_w.h, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_altivec_w.cc, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_altivec_w.h, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.cc, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_cg_dwf_w.h, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_sse_w.cc, lib/actions/ferm/qprop/eoprec_dwf_qprop_array_sse_w.h, lib/actions/ferm/qprop/eoprec_fermact_qprop.cc, lib/actions/ferm/qprop/eoprec_fermact_qprop_array.cc, lib/actions/ferm/qprop/eoprec_fermact_qprop_array.h, lib/actions/ferm/qprop/eoprec_staggered_qprop.h, lib/actions/ferm/qprop/nef_quarkprop4_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_cg_dwf_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_cg_dwf_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.h, lib/actions/ferm/qprop/prec_fermact_qprop.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.h, lib/actions/ferm/qprop/prec_staggered_qprop.h, lib/actions/ferm/qprop/qprop_w.h, lib/actions/ferm/qprop/quarkprop4_s.h, lib/actions/ferm/qprop/quarkprop4_w.cc, lib/update/molecdyn/monomial/abs_monomial.h, lib/update/molecdyn/monomial/eoprec_constdet_one_flavor_rat_monomial5d_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/eoprec_constdet_one_flavor_rat_monomial_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_hasenbusch_monomial5d_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_hasenbusch_monomial_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_monomial5d_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_polynomial_monomial_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_polyprec_monomial_w.cc, lib/update/molecdyn/monomial/eoprec_constdet_two_flavor_polyprec_monomial_w.h, lib/update/molecdyn/monomial/eoprec_logdet_ee_monomial_w.cc, lib/update/molecdyn/monomial/eoprec_logdet_ee_monomial_w.h, lib/update/molecdyn/monomial/eoprec_logdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/eoprec_logdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/monomial_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.cc, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/two_flavor_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polyprec_monomial_w.h: Split apart the fermact.h file into lots of separate bits to make it easier to manage. Split up the linearop.h file more as well. Split up and rearranged the tprec_linop.h files for the anticipated new time-preconditioning. Added some new functionality here. For neatness sake, moved and renamed all the "prec_*" files (which are specific to 4d even-odd preconditioning) to "eoprec_*" filenames. 2006-10-19 11:07 tag chroma3-18-0 2006-10-19 11:07 edwards * aclocal.m4, configure: Induced changes 2006-10-19 11:07 edwards * configure.ac: Changed to 3.18.0 2006-10-18 23:09 edwards * configure: Induced changes 2006-10-18 23:06 edwards * aclocal.m4: Induced changes 2006-10-17 16:06 kostas * tests/chroma/hadron/static_light/: static_light_pot.dat.xml, static_light_pot.out.xml: new output 2006-10-17 16:03 kostas * tests/chroma/hadron/static_light/static_light_pot.ini.xml: modified the input 2006-10-17 15:46 kostas * lib/meas/inline/hadron/inline_static_light_spec_w.cc: fixed xml tag 2006-10-17 14:25 kostas * tests/chroma/hadron/static_light/: static_light_pot.dat.xml, static_light_pot.ini.xml, static_light_pot.out.xml: static meson potential 2006-10-17 14:08 kostas * tests/chroma/hadron/static_light/: static_light.dat.xml, static_light.ini.xml, static_light.out.xml: Test input for static light VS: ---------------------------------------------------------------------- 2006-10-17 12:19 kostas * lib/meas/inline/hadron/inline_hadron_aggregate.cc: registered static light 2006-10-17 11:53 kostas * lib/meas/inline/hadron/inline_static_light_spec_w.cc: fixed typo 2006-10-17 11:43 kostas * lib/meas/inline/hadron/: inline_static_light_spec_w.cc, inline_static_light_spec_w.h: added static light inline 2006-10-17 11:38 kostas * lib/: Makefile.am, meas/inline/hadron/inline_hadron_aggregate.cc: ... 2006-10-17 11:34 kostas * lib/: Makefile.am, meas/inline/hadron/inline_hadron_aggregate.cc: added static light inline measurement 2006-10-17 11:29 kostas * aclocal.m4: fixed makefiles again.. 2006-10-17 11:25 kostas * lib/Makefile.am: fixed makefile 2006-10-17 11:20 kostas * lib/: Makefile.am, meas/hadron/hadron_w.h: Added meson potential into Makefiles and headers 2006-10-17 10:05 kostas * lib/meas/hadron/barQll_w.cc: fixe typo 2006-10-17 10:04 kostas * other_libs/cg-dwf/: aclocal.m4, configure, configure.ac: fixed autoconf bug for Mac OS X 2006-10-17 09:23 kostas * lib/meas/hadron/: barQll_w.cc, barQll_w.h: modified barQll to do full su(3) multiplet 2006-10-15 23:47 kostas * lib/meas/hadron/: mesQlPOT_w.cc, mesQlPOT_w.h: Added heavy-light potential... needs work to be added into the Qll spectrum 2006-10-15 12:18 edwards * install_scripts/jlab/config_chroma_scalar.sh: Updated scripts 2006-10-15 02:16 tag chroma3-17-0 2006-10-15 02:16 edwards * lib/actions/ferm/qprop/prec_dwf_qprop_array_cg_dwf_w.h: Turned off restarts - doing something funny. 2006-10-15 02:00 edwards * NEWS: Info on 3.17.0 2006-10-15 01:59 edwards * tests/chroma/hadron/propagator/: prec_dwf.ini.xml, prec_dwf.out.xml: Updated. 2006-10-15 01:47 edwards * tests/chroma/hadron/propagator/prec_dwf.ini.xml: Changed numRestarts=2 2006-10-15 01:46 edwards * tests/chroma/hadron/propagator/prec_dwf.ini.xml: Added a numRestarts flag in the invertParam group. 2006-10-15 00:17 edwards * lib/actions/ferm/: invert/syssolver_cg_params.cc, invert/syssolver_cg_params.h, invert/syssolver_linop_cg.h, invert/syssolver_linop_cg_array.h, invert/syssolver_mdagm_cg.h, invert/syssolver_mdagm_cg_array.h, qprop/prec_dwf_qprop_array_cg_dwf_w.h: Added restarts. 2006-10-14 23:24 edwards * NEWS: Info on 3.17.0 2006-10-14 18:29 edwards * other_libs/cg-dwf/: AUTHORS, COPYING, INSTALL, Makefile.am, Makefile.original, NEWS, README, acinclude.m4, aclocal.m4, algorithm2e.sty, cg-dwf-config-internal.h.in, cg-dwf-config.h, cg-dwf-config.in, configure, configure.ac, dwf-altivecf.c, dwf-altivecf.h, dwf-bluelightd.c, dwf-bluelightd.h, dwf-bluelightf.c, dwf-bluelightf.h, dwf-ssed.c, dwf-ssed.h, dwf-ssef.c, dwf-ssef.h, dwf-tables.h, dwf.c, dwf.nw, dwf.pdf, interface.nw, interface.pdf: Induced changes 2006-10-14 18:25 edwards * other_libs/cg-dwf/configure: Induced changes 2006-10-14 18:23 edwards * other_libs/cg-dwf/Makefile.am: Added include of cg-dwf-config-internal.h 2006-10-14 13:26 kostas * lib/meas/hadron/BuildingBlocks_w.cc: no comment... 2006-10-14 01:07 edwards * tests/chroma/hadron/noisy_building_blocks/: nbb.dat_0.xml, nbb.dat_1.xml, nbb.out.xml: Updated. 2006-10-14 01:06 edwards * tests/chroma/hadron/building_blocks/: bb.ini.xml, bb.out.xml: Updated output. 2006-10-14 01:03 edwards * lib/meas/inline/hadron/inline_noisy_building_blocks_w.cc: Added dummy Tsrc,Tsnk. 2006-10-14 00:54 edwards * lib/meas/inline/hadron/: hadron.h: Removed spectrum. 2006-10-14 00:52 edwards * lib/meas/: hadron/BuildingBlocks_w.cc, hadron/BuildingBlocks_w.h, inline/hadron/inline_building_blocks_w.cc, inline/hadron/inline_building_blocks_w.h, inline/hadron/inline_noisy_building_blocks_w.cc: Added Translate (ShiftFlag) and Tsrc, Tsnk. 2006-10-14 00:19 edwards * lib/meas/inline/hadron/: inline_spectrum_w.cc, inline_spectrum_w.h: Put in obsolete messages. 2006-10-14 00:11 edwards * tests/regres.pl: Removed spectrum. 2006-10-14 00:11 edwards * tests/chroma/: hadron/mesonspec/mesonspec.out.xml, hadron/mres/mres.out.xml, hadron/stoch_baryon/stoch_baryon.out.xml, hadron/stoch_meson/stoch_meson.out.xml, hadron_s/spectrum_s/spectrum_s.out.xml, schrfun/schrfun.out.xml: Updated output. 2006-10-14 00:10 kostas * lib/meas/hadron/BuildingBlocks_w.cc: Works only for t_src=12 and NT=16. Robert please fix the values of these variables... also add in a new flag for shifting and a new version for input params for BB. Thanks KNO. 2006-10-14 00:05 edwards * tests/chroma/hadron/spectrum/: regres.pl, spectrum.ini.xml, spectrum.metric.xml, spectrum.out.xml: Removed spectrum. 2006-10-13 23:59 edwards * lib/Makefile.am: Turned off spectrum. 2006-10-13 23:57 edwards * lib/meas/inline/hadron/inline_hadron_aggregate.cc: Turned off (but not removed) use of Spectrum 2006-10-13 23:56 edwards * lib/meas/inline/hadron/: hadron.h, inline_hadron_aggregate.cc, inline_spectrumOct_w.cc, inline_spectrumOct_w.h: Removed inline_spectrumOct. 2006-10-13 23:51 edwards * tests/regres.pl, lib/Makefile.am: Removed spectrumOct. 2006-10-13 23:50 edwards * tests/chroma/hadron/spectrumOct/: regres.pl, spectrumOct-v11.ini.xml, spectrumOct-v11.metric.xml, spectrumOct-v11.out.xml: Removed. 2006-10-13 23:48 edwards * tests/chroma/hadron/spectrum/spectrum.out.xml: Switched output back to real. 2006-10-13 23:46 edwards * tests/chroma/hadron/seqsource/: seqsource-baryon.out.xml, seqsource-meson.out.xml, seqsource-photon.out.xml: Updated output. 2006-10-13 23:40 edwards * tests/chroma/hadron/: bar3ptfn/bar3ptfn.out.xml, building_blocks/bb.out.xml, hadspec/hadspec.out.xml, noisy_building_blocks/nbb.out.xml, propagator/prec_clover.out.xml, propagator/prec_dwf.out.xml, propagator/prec_ht_contfrac5d.out.xml, propagator/prec_ovext.out.xml, propagator/prec_ovlap_contfrac5d.out.xml, propagator/prec_parwilson.out.xml, propagator/prec_wilson-smearing.out.xml, propagator/prec_wilson-twisted.out.xml, propagator/prec_wilson.ferm.metric.xml, propagator/prec_wilson.ferm.out.xml, propagator/prec_wilson.out.xml, propagator/prec_zolo_nef.out.xml, propagator/regres.pl, propagator/unprec-ovlap-zolo4d.out.xml, propagator/unprec-zolo-ev-multi.out.xml, propagator/unprec_clover.out.xml, propagator/unprec_dwftransf.out.xml, propagator/unprec_hamberwu.out.xml, propagator/unprec_ovext.out.xml, propagator/unprec_ovlap_contfrac5d.out.xml, propagator/unprec_zolo_nef.out.xml, sink_smear/sink-deriv.out.xml, sink_smear/sink-displace.out.xml, sink_smear/sink_smearing.out.xml: Updated output. 2006-10-13 23:38 edwards * lib/meas/hadron/mesons_w.cc: Put the old "real" output back in front of this routine. George Fleming had made it complex, I make it write real (again). It is mesons2_w.cc that writes complex. 2006-10-13 22:43 edwards * aclocal.m4, configure: Induced changes 2006-10-13 22:42 edwards * lib/io/qprop_io.cc: Changed ChromaProp output format back to version 9. 2006-10-13 22:41 edwards * configure.ac: Changed to 3.17.0 2006-10-13 11:16 juge * lib/meas/hadron/group_baryon_operator_w.h: The header file that goes with the new group_baryon_operator_w.cc 2006-10-13 11:15 juge * lib/meas/hadron/group_baryon_operator_w.cc: Three quark propagators have been manipulated before being translated to all-to-all (which should be correct and have less noise?). The correlation function is now comprised of a single term despite the need for two different quark diagrams (?). This version did compile ... 2006-10-11 11:42 edwards * lib/: fermact.h, actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, actions/ferm/fermacts/prec_dwf_fermact_array_w.h, actions/ferm/fermacts/prec_kno_fermact_array_w.cc, actions/ferm/fermacts/prec_kno_fermact_array_w.h, actions/ferm/fermacts/prec_nef_fermact_array_w.cc, actions/ferm/fermacts/prec_nef_fermact_array_w.h, actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.cc, actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.h, actions/ferm/fermacts/unprec_dwf_fermact_array_w.cc, actions/ferm/fermacts/unprec_dwf_fermact_array_w.h, actions/ferm/fermacts/unprec_nef_fermact_array_w.cc, actions/ferm/fermacts/unprec_nef_fermact_array_w.h, actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.cc, actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.h, actions/ferm/qprop/dwf_quarkprop4_w.cc, actions/ferm/qprop/dwf_quarkprop4_w.h, actions/ferm/qprop/nef_quarkprop4_w.cc, actions/ferm/qprop/nef_quarkprop4_w.h, actions/ferm/qprop/quarkprop4_s.cc, actions/ferm/qprop/quarkprop4_s.h, actions/ferm/qprop/quarkprop4_w.cc, actions/ferm/qprop/quarkprop4_w.h, io/qprop_io.cc, io/qprop_io.h, meas/inline/hadron/inline_propagator_w.cc: Removed use of numRetries !! This was a misguided attempt to get restarts into the code. Will try another way via the system solvers and the InvertParam xml group. 2006-10-11 10:06 edwards * lib/meas/inline/hadron/: inline_noisy_building_blocks_w.cc, inline_noisy_building_blocks_w.h: Updated to match inline_building_blocks. 2006-10-11 09:55 edwards * lib/meas/hadron/BuildingBlocks_w.cc: Fixed ";" typo. 2006-10-11 09:44 edwards * lib/meas/inline/hadron/inline_building_blocks_w.cc, lib/meas/inline/hadron/inline_building_blocks_w.h, tests/chroma/hadron/building_blocks/bb.ini.xml: Added a time_reverse flag. 2006-10-11 09:44 edwards * lib/meas/hadron/: BuildingBlocks_w.cc, BuildingBlocks_w.h: Added a TimeReverse flag for time reversal of the building blocks. Not implemented yet, though. 2006-10-11 09:31 tag chroma3-16-1 2006-10-11 09:31 edwards * NEWS: Info on 3.16.1. 2006-10-11 09:30 edwards * aclocal.m4, configure: Induced changes 2006-10-11 09:30 edwards * configure.ac: Changed to 3.16.1 2006-10-11 09:27 edwards * lib/meas/hadron/hadron_seqsource.cc: Added missing template<> 2006-10-10 23:45 tag chroma3-16-0 2006-10-10 23:45 edwards * NEWS: Info on 3.16.0 2006-10-10 17:01 edwards * lib/meas/hadron/: barseqsrc_w.cc, barseqsrc_w.h, hadron_seqsource.cc, hadron_seqsource.h: Added in get of fermion BC - needed by timeOrder. Rearranged timeOrder's location. Now correct for source spatial phase in seq-sink construction. Should hopefully and correctly fix timeOrder. 2006-10-10 14:32 edwards * lib/meas/hadron/: hadron_seqsource.cc, hadron_seqsource.h: Made timeOrder inlined. 2006-10-10 14:27 edwards * lib/meas/hadron/: barseqsrc_w.cc, barseqsrc_w.h, hadron_seqsource.cc, hadron_seqsource.h: Introduced a time-ordering phase. By default it is a function returning one. For baryon-baryon seqsources, it checks the time-slice ordering. 2006-10-10 13:52 edwards * lib/meas/: hadron/barseqsrc_w.cc, hadron/barseqsrc_w.h, hadron/derivmesonseqsrc_w.cc, hadron/derivmesonseqsrc_w.h, hadron/hadron_seqsource.cc, hadron/hadron_seqsource.h, hadron/mesonseqsrc_w.cc, hadron/mesonseqsrc_w.h, hadron/photon_seqsrc_w.cc, hadron/photon_seqsrc_w.h, inline/hadron/inline_seqsource_w.cc: Changed all seqsources so that the full ForwardProp_t struct from the forward props is passed down. 2006-10-10 13:50 edwards * lib/io/: qprop_io.cc, qprop_io.h: MAde getTSrce() be of type const 2006-10-10 13:48 edwards * aclocal.m4, configure: Induced changes 2006-10-10 13:48 edwards * configure.ac: Changed to 3.16.0 2006-10-10 13:13 tag chroma3-15-1 2006-10-10 13:13 edwards * aclocal.m4, configure: Induced changes 2006-10-10 13:12 edwards * NEWS: Info on 3.15.1 2006-10-10 13:11 edwards * configure.ac: Changed to 3.15.1 2006-09-27 14:21 bjoo * tests/chroma/glue/gaugestate/gaugestate.metric.xml: Fixed an oops in this 2006-09-26 09:47 edwards * tests/chroma/glue/gaugestate/regres.pl: Fixed to point to gauge state tests and not fermstate! 2006-09-24 16:58 edwards * lib/actions/gauge/gaugeacts/: plaq_plus_spatial_two_plaq_gaugeact.cc, rect_gaugeact.cc: Rearranged some adj(a*b) expressions to match cliches. 2006-09-21 16:38 bjoo * lib/actions/ferm/qprop/dwf_qpropt_w.h: Oops 2006-09-21 16:20 tag chroma3-15-0 2006-09-21 16:20 edwards * NEWS: Info on 3.15.0 2006-09-21 16:18 edwards * tests/: regres.pl, chroma/glue/gaugestate/gaugestate.ini.xml, chroma/glue/gaugestate/gaugestate.metric.xml, chroma/glue/gaugestate/gaugestate.out.xml, chroma/glue/gaugestate/regres.pl, chroma/hadron/fermstate/fermstate.ini.xml, chroma/hadron/fermstate/fermstate.metric.xml, chroma/hadron/fermstate/fermstate.out.xml, chroma/hadron/fermstate/regres.pl: New gauge and fermion state tests. 2006-09-21 15:45 edwards * tests/: chroma/eig/eigbnds-v1.ini.xml, chroma/eig/eigbnds-v1.out.xml, chroma/eig/eigbnds.ini.xml, chroma/eig/eigbnds.metric.xml, chroma/eig/eigbnds.out.xml, chroma/eig/regres.pl, chroma/gfix/coulgauge/coulgauge.ini.xml, chroma/gfix/coulgauge/coulgauge.metric.xml, chroma/gfix/coulgauge/coulgauge.out.xml, chroma/glue/fuzwilp/fuzwilp.ini.xml, chroma/glue/fuzwilp/fuzwilp.metric.xml, chroma/glue/fuzwilp/fuzwilp.out.xml, chroma/glue/wilslp/wilslp.ini.xml, chroma/glue/wilslp/wilslp.metric.xml, chroma/glue/wilslp/wilslp.out.xml, chroma/hadron/propagator/prec_wilson-twisted.ini.xml, chroma/hadron/propagator/prec_wilson-twisted.metric.xml, chroma/hadron/propagator/prec_wilson-twisted.out.xml, chroma/hadron_s/spectrum_s/spectrum_s.ini.xml, chroma/hadron_s/spectrum_s/spectrum_s.metric.xml, chroma/hadron_s/spectrum_s/spectrum_s.out.xml, hmc/hmc.prec_wilson.ini.xml, hmc/hmc.prec_wilson.out.xml, purgaug/purgaug.ini.xml, purgaug/purgaug.out.xml, purgaug/purgaug.sfnonpt.ini.xml, purgaug/purgaug.sfnonpt.out.xml: Updated. 2006-09-21 15:42 edwards * lib/: actions/ferm/fermstates/ferm_createstate_aggregate_w.cc, actions/gauge/gaugestates/gauge_createstate_aggregate.cc, meas/inline/glue/inline_wilslp.cc, meas/inline/hadron/inline_building_blocks_w.cc: Fixes. 2006-09-21 15:41 edwards * tests/chroma/hadron/building_blocks/: bb.dat.xml, bb.ini.xml, bb.out.xml: Switched to new version with a FermState. 2006-09-21 14:43 edwards * tests/: chroma/glue/wilslp/wilslp.ini.xml, chroma/glue/wilslp/wilslp.out.xml, purgaug/purgaug.ini.xml, purgaug/purgaug.sfnonpt.ini.xml: New versions of input. 2006-09-21 14:43 edwards * lib/: actions/gauge/gaugebcs/gaugebc_aggregate.cc, actions/gauge/gaugebcs/schr_sf_zero_gaugebc.cc, actions/gauge/gaugebcs/schr_sf_zero_gaugebc.h, meas/inline/glue/inline_apply_gaugestate.cc, meas/inline/glue/inline_apply_gaugestate.h, meas/inline/glue/inline_glue_aggregate.cc, meas/inline/glue/inline_plaquette.cc, meas/inline/glue/inline_plaquette.h, meas/inline/glue/inline_polylp.cc, meas/inline/glue/inline_polylp.h, meas/inline/glue/inline_wilslp.cc, meas/inline/glue/inline_wilslp.h, meas/inline/hadron/inline_apply_fermstate_w.cc, meas/inline/hadron/inline_apply_fermstate_w.h, meas/inline/hadron/inline_building_blocks_w.cc, meas/inline/hadron/inline_building_blocks_w.h, meas/inline/hadron/inline_hadron_aggregate.cc, meas/inline/hadron/inline_propagator_w.cc, meas/inline/hadron/inline_propagator_w.h: Started adding GaugeState and FermState instances in inline measurements. Also have inline_task variants that apply the gauge and ferm states to a gauge field. 2006-09-21 14:41 edwards * aclocal.m4, configure: Induced changes 2006-09-21 14:40 edwards * lib/Makefile.am: Added inline_apply_{ferm,gauge}state and schr_sf_zero_gaugebc 2006-09-21 14:40 edwards * configure.ac: Changed to 3.15.0 2006-09-21 14:36 tag chroma3-14-7 2006-09-21 14:36 edwards * NEWS: Info on 3.14.7 2006-09-21 14:34 edwards * aclocal.m4, configure: Induced changes 2006-09-21 14:33 edwards * configure.ac: Changed to 3.14.7 2006-09-21 14:33 edwards * lib/meas/inline/glue/inline_wilslp.cc: Added registration of create_states. 2006-09-21 10:21 tag chroma3-14-6 2006-09-21 10:21 edwards * NEWS: Info on 3.14.6 2006-09-21 10:19 edwards * aclocal.m4, configure: Induced changes 2006-09-21 10:18 edwards * configure.ac: Changed to 3.14.6 2006-09-20 16:31 edwards * lib/actions/ferm/fermstates/: extfield_aggregate_w.cc, extfield_aggregate_w.h, extfield_fermstate_w.cc, ferm_createstate_aggregate_s.cc, ferm_createstate_aggregate_s.h, ferm_createstate_aggregate_w.cc, ferm_createstate_aggregate_w.h, periodic_fermstate_s.cc, periodic_fermstate_s.h, periodic_fermstate_w.cc, periodic_fermstate_w.h, simple_fermstate_s.cc, simple_fermstate_s.h, simple_fermstate_w.cc, simple_fermstate_w.h, stout_fermstate_w.cc, stout_fermstate_w.h: Major housecleaning. Changed all the uses of the registration method to now be **runtime**. The "registerAll()" function is exposed that will register the thingy. There is a private "registered" flag that is initially false and then set to true upon registration done at runtime. 2006-09-20 16:27 edwards * lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/fermacts/fermacts_aggregate_w.h, lib/actions/ferm/fermacts/ovext_const_div_by_resp_strategy.cc, lib/actions/ferm/fermacts/ovext_const_div_by_resp_strategy.h, lib/actions/ferm/fermacts/ovext_constant_strategy.cc, lib/actions/ferm/fermacts/ovext_constant_strategy.h, lib/actions/ferm/fermacts/ovext_neuberger_strategy.cc, lib/actions/ferm/fermacts/ovext_neuberger_strategy.h, lib/actions/ferm/fermacts/ovext_tuning_strategy_aggregate.cc, lib/actions/ferm/fermacts/ovext_tuning_strategy_aggregate.h, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.cc, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.h, lib/actions/ferm/fermacts/poly_cheb_fermact_w.cc, lib/actions/ferm/fermacts/poly_cheb_fermact_w.h, lib/actions/ferm/fermacts/prec_clover_extfield_fermact_w.cc, lib/actions/ferm/fermacts/prec_clover_extfield_fermact_w.h, lib/actions/ferm/fermacts/prec_clover_fermact_w.cc, lib/actions/ferm/fermacts/prec_clover_fermact_w.h, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.h, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovdwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovdwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_parwilson_fermact_w.cc, lib/actions/ferm/fermacts/prec_parwilson_fermact_w.h, lib/actions/ferm/fermacts/prec_slic_fermact_w.cc, lib/actions/ferm/fermacts/prec_slic_fermact_w.h, lib/actions/ferm/fermacts/prec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/prec_wilson_fermact_w.h, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_clover_fermact_w.cc, lib/actions/ferm/fermacts/unprec_clover_fermact_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_dwftransf_fermact_w.cc, lib/actions/ferm/fermacts/unprec_dwftransf_fermact_w.h, lib/actions/ferm/fermacts/unprec_hamberwu_fermact_w.cc, lib/actions/ferm/fermacts/unprec_hamberwu_fermact_w.h, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovdwf_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovdwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_parwilson_fermact_w.cc, lib/actions/ferm/fermacts/unprec_parwilson_fermact_w.h, lib/actions/ferm/fermacts/unprec_w12_fermact_w.cc, lib/actions/ferm/fermacts/unprec_w12_fermact_w.h, lib/actions/ferm/fermacts/unprec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/unprec_wilson_fermact_w.h, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermbcs/fermbcs_aggregate_s.cc, lib/actions/ferm/fermbcs/fermbcs_aggregate_s.h, lib/actions/ferm/fermbcs/fermbcs_aggregate_w.cc, lib/actions/ferm/fermbcs/fermbcs_aggregate_w.h, lib/actions/ferm/fermbcs/periodic_fermbc_w.cc, lib/actions/ferm/fermbcs/periodic_fermbc_w.h, lib/actions/ferm/fermbcs/schr_chromomag_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_chromomag_fermbc_w.h, lib/actions/ferm/fermbcs/schr_coupling_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_coupling_fermbc_w.h, lib/actions/ferm/fermbcs/schr_dirich_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_dirich_fermbc_w.h, lib/actions/ferm/fermbcs/schr_nonpert_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_nonpert_fermbc_w.h, lib/actions/ferm/fermbcs/schr_triv_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_triv_fermbc_w.h, lib/actions/ferm/fermbcs/simple_fermbc_s.cc, lib/actions/ferm/fermbcs/simple_fermbc_s.h, lib/actions/ferm/fermbcs/simple_fermbc_w.cc, lib/actions/ferm/fermbcs/simple_fermbc_w.h, lib/actions/ferm/fermbcs/twisted_fermbc_w.cc, lib/actions/ferm/fermbcs/twisted_fermbc_w.h, lib/actions/ferm/invert/multi_syssolver_mdagm_aggregate.cc, lib/actions/ferm/invert/multi_syssolver_mdagm_aggregate.h, lib/actions/ferm/invert/multi_syssolver_mdagm_cg.cc, lib/actions/ferm/invert/multi_syssolver_mdagm_cg.h, lib/actions/ferm/invert/multi_syssolver_mdagm_cg_array.cc, lib/actions/ferm/invert/multi_syssolver_mdagm_cg_array.h, lib/actions/ferm/invert/syssolver_linop_aggregate.cc, lib/actions/ferm/invert/syssolver_linop_aggregate.h, lib/actions/ferm/invert/syssolver_linop_cg.cc, lib/actions/ferm/invert/syssolver_linop_cg.h, lib/actions/ferm/invert/syssolver_linop_cg_array.cc, lib/actions/ferm/invert/syssolver_linop_cg_array.h, lib/actions/ferm/invert/syssolver_mdagm_aggregate.cc, lib/actions/ferm/invert/syssolver_mdagm_aggregate.h, lib/actions/ferm/invert/syssolver_mdagm_cg.cc, lib/actions/ferm/invert/syssolver_mdagm_cg.h, lib/actions/ferm/invert/syssolver_mdagm_cg_array.cc, lib/actions/ferm/invert/syssolver_mdagm_cg_array.h, lib/actions/ferm/invert/syssolver_polyprec_aggregate.cc, lib/actions/ferm/invert/syssolver_polyprec_aggregate.h, lib/actions/ferm/invert/syssolver_polyprec_cg.cc, lib/actions/ferm/invert/syssolver_polyprec_cg.h, lib/actions/gauge/gaugeacts/aniso_spectrum_gaugeact.cc, lib/actions/gauge/gaugeacts/aniso_spectrum_gaugeact.h, lib/actions/gauge/gaugeacts/gaugeacts_aggregate.cc, lib/actions/gauge/gaugeacts/gaugeacts_aggregate.h, lib/actions/gauge/gaugeacts/lw_1loop_gaugeact.cc, lib/actions/gauge/gaugeacts/lw_1loop_gaugeact.h, lib/actions/gauge/gaugeacts/lw_tree_gaugeact.cc, lib/actions/gauge/gaugeacts/lw_tree_gaugeact.h, lib/actions/gauge/gaugeacts/pg_gaugeact.cc, lib/actions/gauge/gaugeacts/pg_gaugeact.h, lib/actions/gauge/gaugeacts/plaq_gaugeact.cc, lib/actions/gauge/gaugeacts/plaq_gaugeact.h, lib/actions/gauge/gaugeacts/plaq_plus_spatial_two_plaq_gaugeact.cc, lib/actions/gauge/gaugeacts/plaq_plus_spatial_two_plaq_gaugeact.h, lib/actions/gauge/gaugeacts/rbc_gaugeact.cc, lib/actions/gauge/gaugeacts/rbc_gaugeact.h, lib/actions/gauge/gaugeacts/rect_gaugeact.cc, lib/actions/gauge/gaugeacts/rect_gaugeact.h, lib/actions/gauge/gaugeacts/rg_gaugeact.cc, lib/actions/gauge/gaugeacts/rg_gaugeact.h, lib/actions/gauge/gaugeacts/spatial_two_plaq_gaugeact.cc, lib/actions/gauge/gaugeacts/spatial_two_plaq_gaugeact.h, lib/actions/gauge/gaugeacts/wilson_gaugeact.cc, lib/actions/gauge/gaugeacts/wilson_gaugeact.h, lib/actions/gauge/gaugebcs/gaugebc_aggregate.cc, lib/actions/gauge/gaugebcs/gaugebc_aggregate.h, lib/actions/gauge/gaugebcs/periodic_gaugebc.cc, lib/actions/gauge/gaugebcs/periodic_gaugebc.h, lib/actions/gauge/gaugebcs/schr_chromomag_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_chromomag_gaugebc.h, lib/actions/gauge/gaugebcs/schr_coupling_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_coupling_gaugebc.h, lib/actions/gauge/gaugebcs/schr_dirich_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_dirich_gaugebc.h, lib/actions/gauge/gaugebcs/schr_nonpert_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_nonpert_gaugebc.h, lib/actions/gauge/gaugebcs/schr_triv_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_triv_gaugebc.h, lib/actions/gauge/gaugebcs/simple_gaugebc.cc, lib/actions/gauge/gaugebcs/simple_gaugebc.h, lib/actions/gauge/gaugestates/gauge_createstate_aggregate.cc, lib/actions/gauge/gaugestates/gauge_createstate_aggregate.h, lib/actions/gauge/gaugestates/periodic_gaugestate.cc, lib/actions/gauge/gaugestates/periodic_gaugestate.h, lib/actions/gauge/gaugestates/simple_gaugestate.cc, lib/actions/gauge/gaugestates/simple_gaugestate.h, lib/actions/gauge/gaugestates/stout_gaugestate.cc, lib/actions/gauge/gaugestates/stout_gaugestate.h, lib/meas/hadron/barseqsrc_w.cc, lib/meas/hadron/barseqsrc_w.h, lib/meas/hadron/baryon_operator_aggregate_w.cc, lib/meas/hadron/baryon_operator_aggregate_w.h, lib/meas/hadron/derivmesonseqsrc_w.cc, lib/meas/hadron/derivmesonseqsrc_w.h, lib/meas/hadron/group_baryon_operator_w.cc, lib/meas/hadron/group_baryon_operator_w.h, lib/meas/hadron/mesonseqsrc_w.cc, lib/meas/hadron/mesonseqsrc_w.h, lib/meas/hadron/no_spin_insertion.cc, lib/meas/hadron/no_spin_insertion.h, lib/meas/hadron/photon_seqsrc_w.cc, lib/meas/hadron/photon_seqsrc_w.h, lib/meas/hadron/seqsource_aggregate_w.cc, lib/meas/hadron/seqsource_aggregate_w.h, lib/meas/hadron/simple_baryon_operator_w.cc, lib/meas/hadron/simple_baryon_operator_w.h, lib/meas/hadron/simple_spin_insertion_w.cc, lib/meas/hadron/simple_spin_insertion_w.h, lib/meas/hadron/spin_insertion_aggregate.cc, lib/meas/hadron/spin_insertion_aggregate.h, lib/meas/inline/inline_aggregate.cc, lib/meas/inline/inline_aggregate.h, lib/meas/inline/eig/inline_eig_aggregate.cc, lib/meas/inline/eig/inline_eig_aggregate.h, lib/meas/inline/eig/inline_eigbnds.cc, lib/meas/inline/eig/inline_eigbnds.h, lib/meas/inline/eig/inline_ritz_H_w.cc, lib/meas/inline/eig/inline_ritz_H_w.h, lib/meas/inline/gfix/inline_coulgauge.cc, lib/meas/inline/gfix/inline_coulgauge.h, lib/meas/inline/gfix/inline_gfix_aggregate.cc, lib/meas/inline/gfix/inline_gfix_aggregate.h, lib/meas/inline/glue/inline_fuzwilp.cc, lib/meas/inline/glue/inline_fuzwilp.h, lib/meas/inline/glue/inline_glue_aggregate.cc, lib/meas/inline/glue/inline_glue_aggregate.h, lib/meas/inline/glue/inline_plaquette.cc, lib/meas/inline/glue/inline_plaquette.h, lib/meas/inline/glue/inline_polylp.cc, lib/meas/inline/glue/inline_polylp.h, lib/meas/inline/glue/inline_wilslp.cc, lib/meas/inline/glue/inline_wilslp.h, lib/meas/inline/hadron/inline_bar3ptfn_w.cc, lib/meas/inline/hadron/inline_bar3ptfn_w.h, lib/meas/inline/hadron/inline_building_blocks_w.cc, lib/meas/inline/hadron/inline_building_blocks_w.h, lib/meas/inline/hadron/inline_hadron_aggregate.cc, lib/meas/inline/hadron/inline_hadron_aggregate.h, lib/meas/inline/hadron/inline_hadspec_w.cc, lib/meas/inline/hadron/inline_hadspec_w.h, lib/meas/inline/hadron/inline_make_source_ferm_w.cc, lib/meas/inline/hadron/inline_make_source_ferm_w.h, lib/meas/inline/hadron/inline_make_source_w.cc, lib/meas/inline/hadron/inline_make_source_w.h, lib/meas/inline/hadron/inline_mesonspec_w.cc, lib/meas/inline/hadron/inline_mesonspec_w.h, lib/meas/inline/hadron/inline_mres_w.cc, lib/meas/inline/hadron/inline_mres_w.h, lib/meas/inline/hadron/inline_multi_propagator_w.cc, lib/meas/inline/hadron/inline_multi_propagator_w.h, lib/meas/inline/hadron/inline_multipole_w.cc, lib/meas/inline/hadron/inline_multipole_w.h, lib/meas/inline/hadron/inline_noisy_building_blocks_w.cc, lib/meas/inline/hadron/inline_noisy_building_blocks_w.h, lib/meas/inline/hadron/inline_polar_source_w.cc, lib/meas/inline/hadron/inline_propagator_ferm_w.cc, lib/meas/inline/hadron/inline_propagator_ferm_w.h, lib/meas/inline/hadron/inline_propagator_w.cc, lib/meas/inline/hadron/inline_propagator_w.h, lib/meas/inline/hadron/inline_qpropadd_w.cc, lib/meas/inline/hadron/inline_qpropadd_w.h, lib/meas/inline/hadron/inline_qpropqio_w.cc, lib/meas/inline/hadron/inline_qpropqio_w.h, lib/meas/inline/hadron/inline_qqbar_w.cc, lib/meas/inline/hadron/inline_qqbar_w.h, lib/meas/inline/hadron/inline_qqqNucNuc_w.cc, lib/meas/inline/hadron/inline_qqqNucNuc_w.h, lib/meas/inline/hadron/inline_qqq_w.cc, lib/meas/inline/hadron/inline_qqq_w.h, lib/meas/inline/hadron/inline_seqsource_w.cc, lib/meas/inline/hadron/inline_seqsource_w.h, lib/meas/inline/hadron/inline_sink_smear_w.cc, lib/meas/inline/hadron/inline_sink_smear_w.h, lib/meas/inline/hadron/inline_spectrumOct_w.cc, lib/meas/inline/hadron/inline_spectrumOct_w.h, lib/meas/inline/hadron/inline_spectrumQll.cc, lib/meas/inline/hadron/inline_spectrumQll.h, lib/meas/inline/hadron/inline_spectrum_w.cc, lib/meas/inline/hadron/inline_spectrum_w.h, lib/meas/inline/hadron/inline_stoch_baryon_w.cc, lib/meas/inline/hadron/inline_stoch_baryon_w.h, lib/meas/inline/hadron/inline_stoch_meson_w.cc, lib/meas/inline/hadron/inline_stoch_meson_w.h, lib/meas/inline/hadron_s/inline_hadron_aggregate_s.cc, lib/meas/inline/hadron_s/inline_hadron_aggregate_s.h, lib/meas/inline/hadron_s/inline_spectrum_s.cc, lib/meas/inline/hadron_s/inline_spectrum_s.h, lib/meas/inline/io/inline_erase_obj.cc, lib/meas/inline/io/inline_erase_obj.h, lib/meas/inline/io/inline_gaussian_obj.cc, lib/meas/inline/io/inline_gaussian_obj.h, lib/meas/inline/io/inline_io_aggregate.cc, lib/meas/inline/io/inline_io_aggregate.h, lib/meas/inline/io/inline_list_obj.cc, lib/meas/inline/io/inline_list_obj.h, lib/meas/inline/io/inline_nersc_read_obj.cc, lib/meas/inline/io/inline_nersc_read_obj.h, lib/meas/inline/io/inline_nersc_write_obj.cc, lib/meas/inline/io/inline_nersc_write_obj.h, lib/meas/inline/io/inline_qio_read_obj.cc, lib/meas/inline/io/inline_qio_read_obj.h, lib/meas/inline/io/inline_qio_write_erase_obj.cc, lib/meas/inline/io/inline_qio_write_erase_obj.h, lib/meas/inline/io/inline_qio_write_obj.cc, lib/meas/inline/io/inline_qio_write_obj.h, lib/meas/inline/io/inline_szin_read_obj.cc, lib/meas/inline/io/inline_szin_read_obj.h, lib/meas/inline/io/inline_szin_write_obj.cc, lib/meas/inline/io/inline_szin_write_obj.h, lib/meas/inline/io/inline_xml_write_obj.cc, lib/meas/inline/io/inline_xml_write_obj.h, lib/meas/inline/io/qio_read_obj_funcmap.cc, lib/meas/inline/io/qio_read_obj_funcmap.h, lib/meas/inline/io/qio_write_obj_funcmap.cc, lib/meas/inline/io/qio_write_obj_funcmap.h, lib/meas/inline/io/szin_read_obj_funcmap.cc, lib/meas/inline/io/szin_read_obj_funcmap.h, lib/meas/inline/io/szin_write_obj_funcmap.cc, lib/meas/inline/io/szin_write_obj_funcmap.h, lib/meas/inline/io/xml_write_obj_funcmap.cc, lib/meas/inline/io/xml_write_obj_funcmap.h, lib/meas/inline/schrfun/inline_schrfun_aggregate.cc, lib/meas/inline/schrfun/inline_schrfun_aggregate.h, lib/meas/inline/schrfun/inline_sfpcac_w.cc, lib/meas/inline/schrfun/inline_sfpcac_w.h, lib/meas/inline/smear/inline_link_smear.cc, lib/meas/inline/smear/inline_link_smear.h, lib/meas/inline/smear/inline_smear_aggregate.cc, lib/meas/inline/smear/inline_smear_aggregate.h, lib/meas/sinks/pt_sink_smearing.cc, lib/meas/sinks/pt_sink_smearing.h, lib/meas/sinks/sh_sink_smearing.cc, lib/meas/sinks/sh_sink_smearing.h, lib/meas/sinks/sink_smearing_aggregate.cc, lib/meas/sinks/sink_smearing_aggregate.h, lib/meas/smear/ape_link_smearing.cc, lib/meas/smear/ape_link_smearing.h, lib/meas/smear/deriv_quark_displacement_w.cc, lib/meas/smear/deriv_quark_displacement_w.h, lib/meas/smear/gamma_displacement_w.cc, lib/meas/smear/gamma_displacement_w.h, lib/meas/smear/gaus_quark_smearing.cc, lib/meas/smear/gaus_quark_smearing.h, lib/meas/smear/hyp_link_smearing.cc, lib/meas/smear/hyp_link_smearing.h, lib/meas/smear/link_smearing_aggregate.cc, lib/meas/smear/link_smearing_aggregate.h, lib/meas/smear/no_link_smearing.cc, lib/meas/smear/no_link_smearing.h, lib/meas/smear/no_quark_displacement.cc, lib/meas/smear/no_quark_displacement.h, lib/meas/smear/no_quark_smearing.cc, lib/meas/smear/no_quark_smearing.h, lib/meas/smear/quark_displacement_aggregate.cc, lib/meas/smear/quark_displacement_aggregate.h, lib/meas/smear/quark_smearing_aggregate.cc, lib/meas/smear/quark_smearing_aggregate.h, lib/meas/smear/simple_quark_displacement.cc, lib/meas/smear/simple_quark_displacement.h, lib/meas/smear/stout_link_smearing.cc, lib/meas/smear/stout_link_smearing.h, lib/meas/sources/dilutezN_source_const.cc, lib/meas/sources/dilutezN_source_const.h, lib/meas/sources/partwall_source_const.cc, lib/meas/sources/partwall_source_const.h, lib/meas/sources/pt_source_const.cc, lib/meas/sources/pt_source_const.h, lib/meas/sources/pt_source_smearing.cc, lib/meas/sources/pt_source_smearing.h, lib/meas/sources/rndz2wall_source_const.cc, lib/meas/sources/rndz2wall_source_const.h, lib/meas/sources/sh_source_const.cc, lib/meas/sources/sh_source_const.h, lib/meas/sources/sh_source_smearing.cc, lib/meas/sources/sh_source_smearing.h, lib/meas/sources/source_const_aggregate.cc, lib/meas/sources/source_const_aggregate.h, lib/meas/sources/source_smearing_aggregate.cc, lib/meas/sources/source_smearing_aggregate.h, lib/meas/sources/wall_source_const.cc, lib/meas/sources/wall_source_const.h, lib/update/molecdyn/integrator/integrator_aggregate.cc, lib/update/molecdyn/integrator/integrator_aggregate.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.h, lib/update/molecdyn/integrator/lcm_pqp_leapfrog.cc, lib/update/molecdyn/integrator/lcm_pqp_leapfrog.h, lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.cc, lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.h, lib/update/molecdyn/integrator/lcm_sexton_weingarten.cc, lib/update/molecdyn/integrator/lcm_sexton_weingarten.h, lib/update/molecdyn/integrator/lcm_sw_min_mixed.cc, lib/update/molecdyn/integrator/lcm_sw_min_mixed.h, lib/update/molecdyn/monomial/fixed_random_ferm_monomial.cc, lib/update/molecdyn/monomial/fixed_random_ferm_monomial.h, lib/update/molecdyn/monomial/gauge_monomial.cc, lib/update/molecdyn/monomial/gauge_monomial.h, lib/update/molecdyn/monomial/monomial_aggregate_w.cc, lib/update/molecdyn/monomial/monomial_aggregate_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.cc, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.cc, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.cc, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial5d_w.cc, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.cc, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.cc, lib/update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/unprec_two_flavor_monomial_w.h, lib/update/molecdyn/predictor/last_solution_predictor.cc, lib/update/molecdyn/predictor/last_solution_predictor.h, lib/update/molecdyn/predictor/linear_extrap_predictor.cc, lib/update/molecdyn/predictor/linear_extrap_predictor.h, lib/update/molecdyn/predictor/lu_solve.cc, lib/update/molecdyn/predictor/mre_extrap_predictor.cc, lib/update/molecdyn/predictor/mre_extrap_predictor.h, lib/update/molecdyn/predictor/predictor_aggregate.cc, lib/update/molecdyn/predictor/predictor_aggregate.h, lib/update/molecdyn/predictor/zero_guess_predictor.cc, lib/update/molecdyn/predictor/zero_guess_predictor.h, mainprogs/main/chroma.cc, mainprogs/main/hmc.cc, mainprogs/main/purgaug.cc, mainprogs/tests/t_dwf4d.cc, mainprogs/tests/t_hamiltonian.cc, mainprogs/tests/t_leapfrog.cc, mainprogs/tests/t_mres_4d.cc, mainprogs/tests/t_prec_twoflav_wilson_monomial.cc, mainprogs/tests/t_precact_4d.cc, mainprogs/tests/t_precact_5d.cc, mainprogs/tests/t_ritz_KS.cc, mainprogs/tests/t_unprec_twoflav_wilson_monomial.cc: Major housecleaning. Changed all the uses of the registration method to now be **runtime**. The "registerAll()" function is exposed that will register the thingy. There is a private "registered" flag that is initially false and then set to true upon registration done at runtime. 2006-09-19 15:10 tag chroma3-14-5 2006-09-19 15:10 edwards * tests/chroma/glue/wilslp/wilslp.ini.xml: Fixed comment. 2006-09-19 14:46 edwards * aclocal.m4, configure: Induced changes 2006-09-19 14:46 edwards * configure.ac: Changed to 3.14.5 2006-09-19 14:45 edwards * NEWS: Info on 3.14.5 2006-09-19 14:38 edwards * lib/update/molecdyn/monomial/: fixed_random_ferm_monomial.cc, fixed_random_ferm_monomial.h: Fixed path to fermstates. 2006-09-19 14:34 edwards * lib/update/molecdyn/monomial/: fixed_random_ferm_monomial.cc, fixed_random_ferm_monomial.h: Lots of changes, but mostly a house cleaning. Moved all gauge states and ferm states to a new gaugestates and fermstates directory. Lots of path changes. 2006-09-19 14:30 edwards * lib/meas/inline/glue/inline_wilslp.cc: Lots of changes, but mostly a house cleaning. Moved all gauge states and ferm states to a new gaugestates and fermstates directory. Lots of path changes. 2006-09-19 14:25 edwards * lib/actions/gauge/gaugeacts/: aniso_spectrum_gaugeact.cc, lw_1loop_gaugeact.cc, lw_tree_gaugeact.cc, pg_gaugeact.cc, plaq_gaugeact.cc, plaq_plus_spatial_two_plaq_gaugeact.cc, rbc_gaugeact.cc, rect_gaugeact.cc, rg_gaugeact.cc, spatial_two_plaq_gaugeact.cc, wilson_gaugeact.cc: Lots of changes, but mostly a house cleaning. Moved all gauge states and ferm states to a new gaugestates and fermstates directory. Lots of path changes. 2006-09-19 14:21 edwards * lib/actions/gauge/gaugestates/: gauge_createstate_aggregate.cc, gauge_createstate_aggregate.h, gauge_createstate_factory.h, gaugestates.h, periodic_gaugestate.cc, periodic_gaugestate.h, simple_gaugestate.cc, simple_gaugestate.h, stout_gaugestate.cc, stout_gaugestate.h: Lots of changes, but mostly a house cleaning. Moved all gauge states and ferm states to a new gaugestates and fermstates directory. Lots of path changes. 2006-09-19 14:08 edwards * lib/actions/ferm/fermacts/: asqtad_fermact_s.cc, poly_cheb_fermact_w.cc, prec_clover_fermact_w.cc, prec_dwf_fermact_array_w.cc, prec_ht_contfrac5d_fermact_array_w.cc, prec_kno_fermact_array_w.cc, prec_nef_fermact_array_w.cc, prec_ovdwf_fermact_array_w.cc, prec_ovext_fermact_array_w.cc, prec_ovlap_contfrac5d_fermact_array_w.cc, prec_parwilson_fermact_w.cc, prec_wilson_fermact_w.cc, prec_zolo_nef_fermact_array_w.cc, unprec_clover_fermact_w.cc, unprec_dwf_fermact_array_w.cc, unprec_dwftransf_fermact_w.cc, unprec_hamberwu_fermact_w.cc, unprec_ht_contfrac5d_fermact_array_w.cc, unprec_nef_fermact_array_w.cc, unprec_ovdwf_fermact_array_w.cc, unprec_ovext_fermact_array_w.cc, unprec_ovlap_contfrac5d_fermact_array_w.cc, unprec_parwilson_fermact_w.cc, unprec_w12_fermact_w.cc, unprec_wilson_fermact_w.cc, unprec_zolo_nef_fermact_array_w.cc: Fixed path to ferm_createstate_reader. 2006-09-19 14:00 edwards * tests/purgaug/: purgaug.ini.xml, purgaug.out.xml, purgaug.sfnonpt.ini.xml, purgaug.sfnonpt.out.xml: Updated tests. 2006-09-19 13:53 edwards * lib/actions/ferm/fermstates/: asqtad_state.h, eigen_state.h, extfield.h, extfield_aggregate_w.cc, extfield_aggregate_w.h, extfield_factory_w.h, extfield_fermstate_w.cc, extfield_fermstate_w.h, ferm_createstate_aggregate_s.cc, ferm_createstate_aggregate_s.h, ferm_createstate_aggregate_w.cc, ferm_createstate_aggregate_w.h, ferm_createstate_factory_s.h, ferm_createstate_factory_w.h, ferm_createstate_reader_s.cc, ferm_createstate_reader_s.h, ferm_createstate_reader_w.cc, ferm_createstate_reader_w.h, fermstates.h, overlap_state.cc, overlap_state.h, periodic_fermstate.h, periodic_fermstate_s.cc, periodic_fermstate_s.h, periodic_fermstate_w.cc, periodic_fermstate_w.h, simple_fermstate.h, simple_fermstate_s.cc, simple_fermstate_s.h, simple_fermstate_w.cc, simple_fermstate_w.h, stout_fermstate_params.cc, stout_fermstate_params.h, stout_fermstate_w.cc, stout_fermstate_w.h: Lots of changes, but mostly a house cleaning. Moved all gauge states and ferm states to a new gaugestates and fermstates directory. Lots of path changes. 2006-09-19 12:15 edwards * tests/chroma/glue/wilslp/wilslp.out.xml: Fixed a comment. 2006-09-19 12:05 edwards * lib/actions/ferm/fermacts/: prec_clover_extfield_fermact_w.cc, prec_clover_extfield_fermact_w.h: Added back in. Accidentally removed. 2006-09-19 12:04 edwards * lib/Makefile.am, lib/actions/ferm/ferm.h, lib/actions/ferm/fermacts/asqtad_fermact_s.h, lib/actions/ferm/fermacts/asqtad_state.h, lib/actions/ferm/fermacts/eigen_state.h, lib/actions/ferm/fermacts/extfield.h, lib/actions/ferm/fermacts/extfield_aggregate_w.cc, lib/actions/ferm/fermacts/extfield_aggregate_w.h, lib/actions/ferm/fermacts/extfield_factory_w.h, lib/actions/ferm/fermacts/extfield_fermstate_w.cc, lib/actions/ferm/fermacts/extfield_fermstate_w.h, lib/actions/ferm/fermacts/ferm_createstate_aggregate_s.cc, lib/actions/ferm/fermacts/ferm_createstate_aggregate_s.h, lib/actions/ferm/fermacts/ferm_createstate_aggregate_w.cc, lib/actions/ferm/fermacts/ferm_createstate_aggregate_w.h, lib/actions/ferm/fermacts/ferm_createstate_factory_s.h, lib/actions/ferm/fermacts/ferm_createstate_factory_w.h, lib/actions/ferm/fermacts/ferm_createstate_reader_s.cc, lib/actions/ferm/fermacts/ferm_createstate_reader_s.h, lib/actions/ferm/fermacts/ferm_createstate_reader_w.cc, lib/actions/ferm/fermacts/ferm_createstate_reader_w.h, lib/actions/ferm/fermacts/fermacts.h, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/fermacts/fermacts_s.h, lib/actions/ferm/fermacts/fermacts_w.h, lib/actions/ferm/fermacts/overlap_fermact_base_w.cc, lib/actions/ferm/fermacts/overlap_state.cc, lib/actions/ferm/fermacts/overlap_state.h, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.cc, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.h, lib/actions/ferm/fermacts/periodic_fermstate.h, lib/actions/ferm/fermacts/periodic_fermstate_s.cc, lib/actions/ferm/fermacts/periodic_fermstate_s.h, lib/actions/ferm/fermacts/periodic_fermstate_w.cc, lib/actions/ferm/fermacts/periodic_fermstate_w.h, lib/actions/ferm/fermacts/prec_clover_extfield_fermact_w.cc, lib/actions/ferm/fermacts/prec_clover_extfield_fermact_w.h, lib/actions/ferm/fermacts/prec_slic_fermact_w.cc, lib/actions/ferm/fermacts/simple_fermstate.h, lib/actions/ferm/fermacts/simple_fermstate_s.cc, lib/actions/ferm/fermacts/simple_fermstate_s.h, lib/actions/ferm/fermacts/simple_fermstate_w.cc, lib/actions/ferm/fermacts/simple_fermstate_w.h, lib/actions/ferm/fermacts/stout_fermact_params.cc, lib/actions/ferm/fermacts/stout_fermact_params.h, lib/actions/ferm/fermacts/stout_fermstate_params.cc, lib/actions/ferm/fermacts/stout_fermstate_params.h, lib/actions/ferm/fermacts/stout_fermstate_w.cc, lib/actions/ferm/fermacts/stout_fermstate_w.h, lib/actions/ferm/fermacts/stout_state.cc, lib/actions/ferm/fermacts/stout_state.h, lib/actions/ferm/fermacts/stout_utils.cc, lib/actions/ferm/fermacts/stout_utils.h, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/linop/asq_dsl_s.h, lib/actions/ferm/linop/prec_clover_extfield_linop_w.cc, lib/actions/ferm/linop/prec_slic_linop_w.h, lib/actions/gauge/gauge.h, lib/actions/gauge/gaugeacts/gauge_createstate_aggregate.cc, lib/actions/gauge/gaugeacts/gauge_createstate_aggregate.h, lib/actions/gauge/gaugeacts/gauge_createstate_factory.h, lib/actions/gauge/gaugeacts/gaugeacts.h, lib/actions/gauge/gaugeacts/gaugeacts_aggregate.cc, lib/actions/gauge/gaugeacts/simple_gaugestate.cc, lib/actions/gauge/gaugeacts/simple_gaugestate.h, lib/actions/gauge/gaugeacts/stout_gaugestate.cc, lib/actions/gauge/gaugeacts/stout_gaugestate.h, lib/util/gauge/stout_utils.cc, lib/util/gauge/stout_utils.h, mainprogs/tests/t_aniso_gaugeact.cc, mainprogs/tests/t_stout_state.cc: Lots of changes, but mostly a house cleaning. Moved all gauge states and ferm states to a new gaugestates and fermstates directory. Lots of path changes. 2006-09-19 12:02 edwards * lib/meas/inline/glue/: inline_wilslp.cc, inline_wilslp.h: Now have an optional gaugestate reader. 2006-09-19 12:01 edwards * tests/chroma/glue/wilslp/: wilslp.ini.xml, wilslp.out.xml: New form of gaugestate input. 2006-09-19 09:54 tag chroma3-14-4 2006-09-19 09:54 bjoo * configure, configure.ac: Simplified flags. Bumped up version tag in configure.ac 2006-09-19 09:18 bjoo * configure, configure.ac, other_libs/cg-dwf/configure, other_libs/cg-dwf/configure.ac: Simplified the flags for --enable-cg-dwf 2006-09-18 21:50 edwards * lib/actions/gauge/gaugebcs/periodic_gaugebc.h: Added emacs control. 2006-09-18 17:04 tag chroma3-14-3 2006-09-18 17:04 bjoo * configure, configure.ac, lib/Makefile.am, lib/actions/ferm/qprop/avp_altivecf_solver.cc, lib/actions/ferm/qprop/avp_altivecf_solver.h, lib/actions/ferm/qprop/dwf_qpropt_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_cg_dwf_w.h: Should now be able to use CG-DWF for bluelight (in the presence of AVPs compiler) and AltiVec 2006-09-18 16:28 bjoo * lib/actions/ferm/qprop/: avp_bgld_solver.cc, avp_bgld_solver.h, avp_bglf_solver.cc, avp_bglf_solver.h: Initial conversions for BlueGene 2006-09-18 16:11 bjoo * other_libs/cg-dwf/: aclocal.m4, cg-dwf-config-internal.h.in, configure: Induced changes 2006-09-18 16:11 bjoo * other_libs/cg-dwf/: cg-dwf-config.h, configure.ac: Now define architecture flag in cg-dwf-config.h 2006-09-18 15:53 tag chroma3-14-2 2006-09-18 15:53 bjoo * lib/actions/ferm/qprop/: avp_inverter_interface.h, avp_sse_solver.h: min_iter = 0 now works in v1.3.3 2006-09-18 15:45 tag chroma3-14-1 2006-09-18 15:45 bjoo * lib/actions/ferm/qprop/prec_dwf_qprop_array_cg_dwf_w.h: Single Double Prec now works 2006-09-18 15:30 bjoo * lib/actions/ferm/qprop/: avp_inverter_interface.h, avp_ssed_solver.cc, avp_ssed_solver.h, avp_ssef_solver.cc, avp_ssef_solver.h, prec_dwf_qprop_array_cg_dwf_w.h: patched for version 1.3.3 reverted to previous model of init and fini 2006-09-18 15:08 bjoo * other_libs/cg-dwf/: aclocal.m4, configure, configure.ac, dwf.c, dwf.nw: v 1.3.3 patch test 2006-09-18 14:23 tag chroma3-14-0 2006-09-18 14:23 bjoo * lib/actions/ferm/qprop/prec_dwf_qprop_array_cg_dwf_w.h, tests/chroma/hadron/propagator/prec_dwf.out.xml: Fixed n_count output 2006-09-18 14:12 bjoo * tests/chroma/hadron/propagator/: prec_dwf.ini.xml, prec_dwf.out.xml: New regres for prec_dwf.ini.xml - retries set to 1 and so the output structure has changed 2006-09-18 13:29 bjoo * lib/actions/ferm/qprop/prec_dwf_qprop_array_cg_dwf_w.h: Removed unwanted ifdef 2006-09-18 10:17 bjoo * lib/actions/ferm/qprop/: avp_inverter_interface.h, avp_ssed_solver.cc, avp_ssed_solver.h, avp_ssef_solver.cc, avp_ssef_solver.h, prec_dwf_qprop_array_cg_dwf_w.h: DWF Prop Phase B Done 2006-09-16 12:55 edwards * lib/meas/hadron/: group_baryon_operator_w.cc, group_baryon_operator_w.h: Jimmy Juge's new version of these routines do not compile. I'm reinserting the previous version in front of these to at least let them compile and pass the regression tests. 2006-09-16 12:33 edwards * lib/actions/ferm/qprop/: avp_ssed_solver.cc~, avp_ssed_solver.h~, avp_ssef_solver.cc~, avp_ssef_solver.h~: Inadvertantly added. 2006-09-16 01:20 juge * lib/meas/hadron/group_baryon_operator_w.cc: This is the code which goes with the comments of group_baryon_operator_w.h 2006-09-16 01:18 juge * lib/meas/hadron/group_baryon_operator_w.h: Checking in the change in the approach of the all-to-all code. The code is not written yet, but the new approach is outlined and basic skeleton is described. A perl script which generates the input file is also given at the very end. This final approach where the baryon operators are built-up from QQQ building blocks which are never recomputed should be the final change in the "philosophy" of the program. One final reduction may be to avoid having an array of the QQQ class and just run through them one at a time. This code is still being worked on but is being checked in because I can no longer come up with ways to make it more efficient and so the approach should not change anymore. 2006-09-16 01:01 tag help 2006-09-16 01:01 bjoo * lib/actions/ferm/qprop/: avp_inverter_interface.h, dwf_qpropt_w.h, prec_dwf_qprop_array_cg_dwf_w.h: More arsing about 2006-09-15 23:25 bjoo * lib/Makefile.am: MAkefiles 2006-09-15 23:24 bjoo * lib/actions/ferm/qprop/: avp_inverter_interface.h, avp_sse_solver.h, avp_ssed_solver.cc, avp_ssed_solver.cc~, avp_ssed_solver.h, avp_ssed_solver.h~, avp_ssef_solver.cc, avp_ssef_solver.cc~, avp_ssef_solver.h, avp_ssef_solver.h~, dwf_qpropt_w.h, prec_dwf_qprop_array_cg_dwf_w.h: Code Factor 2006-09-15 15:22 bjoo * lib/actions/ferm/qprop/: avp_inverter_interface.cc, avp_inverter_interface.h, avp_sse_solver.h, dwf_qpropt_w.h, prec_dwf_qprop_array_cg_dwf_w.h, prec_dwf_qprop_array_cg_dwf_w.cc: Newer structure 2006-09-15 15:21 bjoo * lib/Makefile.am: New Makefile.am 2006-09-15 11:28 edwards * scripts/run_chroma_xmldiff.pl: Changed to now support either a "log" or and "output" entry. 2006-09-15 11:27 edwards * tests/t_leapfrog/: regres.pl, t_leapfrog.aniso_spectrum.log.xml, t_leapfrog.aniso_spectrum.out.xml, t_leapfrog.fixed_X_action_stout.log.xml, t_leapfrog.fixed_X_action_stout.out.xml, t_leapfrog.lw.sfnonpt.log.xml, t_leapfrog.lw.sfnonpt.out.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.log.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.out.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.log.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.out.xml, t_leapfrog.parwilson_pqp_integrator_mts.log.xml, t_leapfrog.parwilson_pqp_integrator_mts.out.xml, t_leapfrog.prec_1flav_dwf.log.xml, t_leapfrog.prec_1flav_dwf.out.xml, t_leapfrog.prec_1flav_wilson.log.xml, t_leapfrog.prec_1flav_wilson.out.xml, t_leapfrog.prec_2flav_clover.log.xml, t_leapfrog.prec_2flav_clover.out.xml, t_leapfrog.prec_2flav_clover.sfnonpt.log.xml, t_leapfrog.prec_2flav_clover.sfnonpt.out.xml, t_leapfrog.prec_2flav_clover_ee_oo.log.xml, t_leapfrog.prec_2flav_clover_ee_oo.out.xml, t_leapfrog.prec_clover_stout.log.xml, t_leapfrog.prec_clover_stout.out.xml, t_leapfrog.prec_contfrac.log.xml, t_leapfrog.prec_contfrac.out.xml, t_leapfrog.prec_dwf.log.xml, t_leapfrog.prec_dwf.out.xml, t_leapfrog.prec_hasenbusch_wilson.log.xml, t_leapfrog.prec_hasenbusch_wilson.out.xml, t_leapfrog.prec_parwilson.log.xml, t_leapfrog.prec_parwilson.out.xml, t_leapfrog.prec_wilson.log.xml, t_leapfrog.prec_wilson.out.xml, t_leapfrog.rect_gaugeact.log.xml, t_leapfrog.rect_gaugeact.out.xml, t_leapfrog.rect_gaugeact_1.log.xml, t_leapfrog.rect_gaugeact_1.out.xml, t_leapfrog.rect_gaugeact_aniso.log.xml, t_leapfrog.rect_gaugeact_aniso.out.xml, t_leapfrog.rect_gaugeact_c1t0.log.xml, t_leapfrog.rect_gaugeact_c1t0.out.xml, t_leapfrog.rect_gaugeact_omit2linkT.log.xml, t_leapfrog.rect_gaugeact_omit2linkT.out.xml, t_leapfrog.two_plaq_spatial_gaugeact.log.xml, t_leapfrog.two_plaq_spatial_gaugeact.out.xml, t_leapfrog.unprec_clover.log.xml, t_leapfrog.unprec_clover.out.xml, t_leapfrog.unprec_dwf.log.xml, t_leapfrog.unprec_dwf.out.xml, t_leapfrog.unprec_hasenbusch_wilson.log.xml, t_leapfrog.unprec_hasenbusch_wilson.out.xml, t_leapfrog.unprec_wilson.log.xml, t_leapfrog.unprec_wilson.out.xml: Changed out.xml files to log.xml files. The regression file is now updated to use a "log" entry saying to do the tests of that xml output. 2006-09-15 11:06 edwards * mainprogs/tests/: t_hamiltonian.cc, t_hmc_pg.cc, t_leapfrog.cc: Split output to also have log file. 2006-09-15 09:47 bjoo * other_libs/cg-dwf/: aclocal.m4, configure, configure.ac: Changed configure script to look first for bgl-gcc for bluelight builds 2006-09-15 09:16 bjoo * other_libs/cg-dwf/: Makefile.original, algorithm2e.sty, configure.ac, dwf-altivecf.c, dwf-bluelightd.c, dwf-bluelightf.c, dwf-ssed.c, dwf-ssef.c, dwf-tables.h, dwf.c, dwf.nw, dwf.pdf, interface.pdf, config/altivecf-debug.conf, config/bluelightd-debug.conf, config/bluelightd.conf, config/bluelightf.conf, tests/qdpc/Makefile, tests/qdpc/README, tests/qdpc/cg-solver.c, tests/qdpc/cg-solver1.c, tests/qdpc/dwf-dd.c, tests/qdpc/dwf-dd1.c, tests/qdpc/dwf-op.c, tests/qdpc/dwf-op1.c, tests/qdpc/dwf-opx.c, tests/qdpc/dwf-opx1.c, tests/qdpc/dwf1-run, tests/qdpc/dwf1-run-s, tests/qdpc/fermions.c, tests/qdpc/test-case-args, tests/ssef/Makefile, tests/ssef/README, tests/ssef/bl.c, tests/ssef/main.c, tests/xqmp/Makefile, tests/xqmp/qmp.c, aclocal.m4, configure: First attempt at merging 1.3.2 changes 2006-09-14 22:59 tag chroma3-13-0 2006-09-14 22:59 edwards * NEWS: Info on 3.13.0 2006-09-14 22:53 edwards * tests/hmc/: hmc.prec_parwilson.ini.xml, iw_b2p2_16_32_cfz_Nf3_m0p02_ls8.xml.ini: Removed. 2006-09-14 22:53 edwards * tests/hmc/: hmc.prec_wilson.ini.xml, hmc.prec_wilson.out.xml: Changed number of updates. Now, split output to XMLLOG and XMLDAT. 2006-09-14 22:51 edwards * mainprogs/main/hmc.cc: Split output to go XMLLOG and XMLDAT. 2006-09-14 22:50 edwards * lib/update/molecdyn/: hamiltonian/abs_hamiltonian.h, hamiltonian/exact_hamiltonian.h, hmc/abs_hmc.h, integrator/abs_integrator.h, integrator/lcm_integrator_leaps.cc, integrator/lcm_minimum_norm2_integrator_mts.cc, integrator/lcm_minimum_norm2_qpq_integrator_mts.cc, integrator/lcm_pqp_leapfrog_mts.cc, integrator/lcm_sexton_weingarten.cc, monomial/fixed_random_ferm_monomial.cc, monomial/gauge_monomial.h, monomial/one_flavor_rat_monomial5d_w.h, monomial/one_flavor_rat_monomial_w.h, monomial/prec_logdet_ee_monomial_w.h, monomial/two_flavor_hasenbusch_monomial5d_w.h, monomial/two_flavor_hasenbusch_monomial_w.h, monomial/two_flavor_monomial5d_w.h, monomial/two_flavor_monomial_w.h, monomial/two_flavor_polynomial_monomial_w.h, monomial/two_flavor_polyprec_monomial_w.h: Changed output to go to XMLLOG. 2006-09-14 22:48 edwards * lib/io/xmllog_io.h: Changed singleton to disambiguate. 2006-09-14 22:46 edwards * lib/singleton.h: Added DefaultLifetime{1,2} to help with disambiguation. 2006-09-14 22:44 edwards * configure: Induced changes 2006-09-14 22:41 edwards * aclocal.m4: Induced changes 2006-09-14 22:39 edwards * configure.ac: Changed to 3.13.0 2006-09-14 21:43 edwards * tests/hmc/: dbw2_bp764_16_32_cfz_Nf3_m0p02_ls8.xml.ini, hmc.prec_1flav_dwf.xml.ini, hmc.prec_1flav_stout_dwf.xml.ini, hmc.prec_1flav_wilson.xml.ini, hmc.prec_3flav_dwf.xml.ini, hmc.prec_contfrac.xml.ini, hmc.prec_dwf.xml.ini, hmc.prec_mixed_wilson.xml.ini, hmc.prec_parwilson.xml.ini, hmc.prec_stout_dwf.xml.ini, hmc.prec_stout_wilson.xml.ini, hmc.prec_wilson.xml.ini, hmc.unprec_stout_dwf.xml.ini, hmc.unprec_stout_wilson.xml.ini, hmctest.in.xml, iw_b2p2_16_32_cfz_Nf3_m0p024_ls6.xml.ini, iw_b2p2_16_32_cfz_Nf3_m0p024_ls6_bjoo.xml.ini, iw_b2p2_8_16_cfz_Nf3_m0p03_ls8_dt0p005.ini.xml, iw_b2p2_dwf_Nf3_m0p04_ls8.xml.ini: Removed obsolete input files. 2006-09-14 10:48 edwards * other_libs/cg-dwf/: dwf-ssed.c, dwf.nw: Changed double prec vector types to new intel intrinsics. 2006-09-14 10:46 bjoo * other_libs/cg-dwf/dwf-ssed.c: dwf-ssed.c -> m128d 2006-09-14 10:06 edwards * other_libs/cg-dwf/: dwf-ssef.c, dwf.nw: Changes to support new style vector intrinsics required by gcc4. 2006-09-14 10:05 edwards * other_libs/cg-dwf/Makefile.original: Added directory to find noweb stuff 2006-09-13 22:55 edwards * lib/io/qprop_io.cc: Added check of FermState/FermionBC/boundary. 2006-09-13 15:11 bjoo * configure, configure.ac, lib/Makefile.am, lib/chroma_config_internal.h.in, mainprogs/main/Makefile.am, mainprogs/tests/Makefile.am: Integrated AVPs double precision stuff 2006-09-13 15:06 bjoo * lib/actions/ferm/qprop/: dwf_qpropt_w.h, prec_dwf_qprop_array_cg_dwf_w.cc, prec_dwf_qprop_array_cg_dwf_w.h: Integration of newst DWF inverter 2006-09-13 14:14 bjoo * other_libs/: Makefile.am, cg-dwf/Makefile.am, cg-dwf/configure: Added cg-dwf 2006-09-13 14:10 bjoo * other_libs/cg-dwf/autoconfdir/: config.guess, config.sub: Added extra files 2006-09-13 14:09 bjoo * other_libs/cg-dwf/: aclocal.m4, cg-dwf-config-internal.h.in, cg-dwf-config.h, configure.ac: Added .h files to hide autoconf macros in 2006-09-13 13:39 bjoo * other_libs/cg-dwf/tests/: qdpc/.gdb_history, xqmp/.gdb_history: Removed .gdb_history files 2006-09-13 13:36 tag start 2006-09-13 13:36 bjoo * other_libs/cg-dwf/: AUTHORS, COPYING, INSTALL, Makefile.am, Makefile.original, NEWS, README, acinclude.m4, aclocal.m4, algorithm2e.sty, cg-dwf-config.in, configure, configure.ac, dwf-altivecf.c, dwf-altivecf.h, dwf-bluelightd.c, dwf-bluelightd.h, dwf-bluelightf.c, dwf-bluelightf.h, dwf-ssed.c, dwf-ssed.h, dwf-ssef.c, dwf-ssef.h, dwf-tables.h, dwf.c, dwf.nw, dwf.pdf, interface.nw, interface.pdf, autoconfdir/depcomp, autoconfdir/install-sh, autoconfdir/missing, config/altivecf.conf, config/bluelightd.conf, config/default, config/ssed.conf, config/ssef.conf, tests/bluelight/Makefile, tests/bluelight/README, tests/bluelight/bl.c, tests/bluelight/main.c, tests/qdpc/.DS_Store, tests/qdpc/8-3-16-2-1-altivecf-single, tests/qdpc/8-3-16-2-altivecf-single, tests/qdpc/Makefile, tests/qdpc/cg-solver.c, tests/qdpc/dwf-op.c, tests/qdpc/dwf-run, tests/qdpc/dwf-run-s, tests/qdpc/op-altivecf.res, tests/qdpc/results, tests/qdpc/run-me, tests/xqmp/.gdb_history, tests/xqmp/Makefile, tests/xqmp/README, tests/xqmp/qmp-check.c, tests/xqmp/qmp.c, tests/qdpc/.gdb_history, tests/qdpc/8-3-16-2-1-ssed-single, tests/qdpc/8-3-16-2-1-ssef-single, tests/qdpc/8-3-16-2-ssed-single, tests/qdpc/8-3-16-2-ssef-single, tests/qdpc/README, tests/qdpc/cg-solver1.c, tests/qdpc/op-ssed.res, tests/qdpc/op-ssef.res, tests/qdpc/ssed-test: Imported sources 2006-09-13 13:36 bjoo * other_libs/cg-dwf/: AUTHORS, COPYING, INSTALL, Makefile.am, Makefile.original, NEWS, README, acinclude.m4, aclocal.m4, algorithm2e.sty, cg-dwf-config.in, configure, configure.ac, dwf-altivecf.c, dwf-altivecf.h, dwf-bluelightd.c, dwf-bluelightd.h, dwf-bluelightf.c, dwf-bluelightf.h, dwf-ssed.c, dwf-ssed.h, dwf-ssef.c, dwf-ssef.h, dwf-tables.h, dwf.c, dwf.nw, dwf.pdf, interface.nw, interface.pdf, autoconfdir/depcomp, autoconfdir/install-sh, autoconfdir/missing, config/altivecf.conf, config/bluelightd.conf, config/default, config/ssed.conf, config/ssef.conf, tests/bluelight/Makefile, tests/bluelight/README, tests/bluelight/bl.c, tests/bluelight/main.c, tests/qdpc/.DS_Store, tests/qdpc/8-3-16-2-1-altivecf-single, tests/qdpc/8-3-16-2-altivecf-single, tests/qdpc/Makefile, tests/qdpc/cg-solver.c, tests/qdpc/dwf-op.c, tests/qdpc/dwf-run, tests/qdpc/dwf-run-s, tests/qdpc/op-altivecf.res, tests/qdpc/results, tests/qdpc/run-me, tests/xqmp/.gdb_history, tests/xqmp/Makefile, tests/xqmp/README, tests/xqmp/qmp-check.c, tests/xqmp/qmp.c, tests/qdpc/.gdb_history, tests/qdpc/8-3-16-2-1-ssed-single, tests/qdpc/8-3-16-2-1-ssef-single, tests/qdpc/8-3-16-2-ssed-single, tests/qdpc/8-3-16-2-ssef-single, tests/qdpc/README, tests/qdpc/cg-solver1.c, tests/qdpc/op-ssed.res, tests/qdpc/op-ssef.res, tests/qdpc/ssed-test: Initial revision 2006-09-11 15:35 bjoo * scripts/test_runners/mpirun_rsh_runner.sh.in: Modified this for mvapich-0.9.8 running 2006-09-09 12:57 tag chroma3-12-0 2006-09-09 12:57 edwards * aclocal.m4, configure: Induced changes 2006-09-09 12:55 edwards * configure.ac: Changed to 3.12.0 2006-09-09 12:54 edwards * NEWS: Info on 3.12.0 2006-09-08 12:33 edwards * scripts/test_runners/mpirun_rsh_runner.sh.in: Changed run nodes to qcd6n319 and qcd6n320 2006-09-08 00:34 edwards * lib/actions/ferm/fermacts/fermacts_aggregate_w.cc: Comment out the external field stuff for the moment. 2006-09-07 15:11 edwards * lib/meas/inline/inline.h: Added missing include of schrfun.h 2006-09-07 10:02 bjoo * lib/actions/ferm/fermacts/stout_utils.cc: Added a (REAL) cast to sqrt(2) to stop BG/L builds complaining about ambiguity in the sqrt 2006-09-07 09:16 bjoo * mainprogs/tests/t_stout_state.cc: Updated t_stout_state to stop the nightly failures 2006-09-07 00:24 edwards * lib/actions/: ferm/fermacts/ferm_createstate_aggregate_w.cc, ferm/fermacts/ferm_createstate_reader_w.cc, ferm/fermacts/fermacts_aggregate_w.cc, ferm/fermacts/prec_clover_fermact_w.cc, ferm/fermacts/prec_dwf_fermact_array_w.cc, gauge/gaugeacts/gauge_createstate_aggregate.cc, gauge/gaugeacts/gaugeacts_aggregate.cc: Rearranged where ferm_createstate and gauge_createstate are registered. Removed from clover & dwf code. Now the registrations are properly in the fermact or gaugeact registrations. The old way of having a bool registered within the readers was incorrect. 2006-09-07 00:22 edwards * lib/actions/ferm/fermacts/stout_utils.cc: Changed QMP_fprintf to simply fprintf. 2006-09-06 21:26 bjoo * lib/: Makefile.am, actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, actions/ferm/invert/invcg2_array.cc, actions/gauge/gaugeacts/gauge_createstate_aggregate.cc, actions/gauge/gaugeacts/stout_gaugestate.cc, actions/gauge/gaugeacts/stout_gaugestate.h, actions/gauge/gaugebcs/simple_gaugebc.h: Added stout gaugestate. Deriv doesnt work yet. 2006-09-06 15:05 bjoo * aclocal.m4, lib/Makefile.am, lib/actions/ferm/linop/prec_slic_linop_w.cc, lib/update/molecdyn/monomial/fixed_random_ferm_monomial.cc, lib/update/molecdyn/monomial/fixed_random_ferm_monomial.h, mainprogs/tests/t_stout_state.cc: Factored the getQsAndC and getFsAndBs and stout_smear and deriv_recurse functions off into stout_utils.h and stout_utils.cc and added template parameters to the stout_fermstate for eventual use in chiral fermions. Checked things still work and they do. Next move is to introduce a stout gauge state 2006-09-06 14:59 bjoo * lib/actions/ferm/fermacts/: stout_fermstate_w.cc, stout_fermstate_w.h, stout_utils.cc, stout_utils.h: Moved most of the stouting functions into stout_utils.h and cc from here. Also template ified the whole thing so that eventually we can use stouting in DWF 2006-09-06 10:31 edwards * lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.h: Added sanity check on length of monomial group versus the number of step sizes. 2006-09-06 09:41 bjoo * tests/t_leapfrog/: t_leapfrog.fixed_X_action_stout.out.xml, t_leapfrog.prec_clover_stout.out.xml: New regression test output 2006-09-06 09:38 bjoo * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Reworked debugging output 2006-09-06 09:18 bjoo * lib/actions/ferm/fermacts/: stout_fermstate_w.cc, stout_fermstate_w.h: Added extra filtering onto stout fermact for corner cases 2006-09-05 23:43 edwards * lib/actions/ferm/qprop/: asqtad_cps_wrapper_qprop.h, asqtad_qprop.h, dwf_qpropt_w.h, dwf_quarkprop4_w.h, nef_quarkprop4_w.h, qprop.h, qprop_w.h, quarkprop4_multi_w.h, quarkprop4_s.h, quarkprop4_w.h: Added emacs controls. 2006-09-02 22:26 edwards * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Changed how corner case is handled. Now there is a flag set and the corner case code is called if various conditions are met. The problems seem to be that c1 can be moderately large (0.0125) but have c0abs/c0max=1 within precision causing theta to go to nan. So, we now check for the closeness of c0abs-c0max only if the small c1 case is not met. 2006-09-02 20:11 edwards * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Bug fix!! There was a b1[2].real() that should have been should have been imag(). 2006-09-01 15:36 edwards * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Changed cutoff on corner case from 1.0e-4 to 4.0e-3. With the previous value I still ran into nan's. Also, Colin Morningstart used this new value. 2006-08-31 16:03 bjoo * tests/t_leapfrog/: t_leapfrog.fixed_X_action_stout.out.xml, t_leapfrog.prec_clover_stout.ini.xml, t_leapfrog.prec_clover_stout.out.xml: Added new regressions to stout force 2006-08-31 12:40 bjoo * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Patched for when c0 and c1 are small. Now works for unit gauge too 2006-08-30 21:31 bjoo * lib/util/gauge/eesu3.cc: Added a missing 0 2006-08-30 00:59 edwards * tests/t_leapfrog/t_leapfrog.fixed_X_action_stout.out.xml: Updated test with new binary. 2006-08-29 23:18 tag chroma3-11-2 2006-08-29 23:18 edwards * aclocal.m4, configure: Induced changes 2006-08-29 23:16 edwards * configure.ac: Changed to 3.11.2 2006-08-29 23:16 edwards * NEWS: More info on 3.11.2 2006-08-29 23:15 edwards * NEWS: Info on 3.11.2 2006-08-29 22:57 edwards * lib/meas/inline/hadron/inline_hadspec_w.cc: Changed hadspec to check for the presence of DisplacementType, and if not present assume it is NONE. 2006-08-29 22:56 edwards * lib/io/qprop_io.cc: Changed backwards compatibility support for disp_length and disp_dir to now write out the SIMPLE_DISPLACEMENT group. 2006-08-29 22:10 edwards * lib/util/ft/sftmom.cc: Technically a bug fix. The test for a zero_offset should only be in directions not in the fourier transform. E.g., there was a missing test of mu==decay_dir. 2006-08-29 21:44 edwards * lib/io/qprop_io.cc: Small bug fix. The path to "FermionAction" in ChromaProp in versions 4 thu 6 needed "/FermionAction". 2006-08-29 11:58 edwards * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Turned off debugging. 2006-08-29 11:51 edwards * scripts/test_runners/mpirun_rsh_runner.sh.in: Changed machine names. 2006-08-28 17:44 edwards * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Put in a fix for a check of theta. However, still left in some debugging that should be removed. Set cutoff to 1.0e-6. 2006-08-26 01:51 edwards * lib/meas/gfix/polar_dec.h: Doxygen fix. 2006-08-26 01:50 edwards * lib/actions/ferm/linop/: clover_term_base_w.cc, lwldslash_base_array_w.cc, lwldslash_base_array_w.h, lwldslash_base_w.cc, lwldslash_base_w.h, polynomial_op.h, unprec_hamberwu_linop_w.cc, unprec_parwilson_linop_w.cc, unprec_w12_linop_w.cc, unprec_wilson_linop_w.cc: Doxygen fixes. 2006-08-26 01:44 edwards * lib/: linearop.h, actions/ferm/linop/clover_term_base_w.h: Doxygen fixes. 2006-08-26 01:42 edwards * lib/actions/ferm/linop/: polprec_op.h, polynomial_op.h: Fixed doxygen comments 2006-08-26 01:40 edwards * lib/: linearop.h, state.h: Fixed doxygen comments. 2006-08-25 22:13 edwards * mainprogs/tests/t_leapfrog.cc: Added some START_CODE/END_CODE 2006-08-25 22:12 edwards * mainprogs/main/: chroma.cc, hmc.cc, purgaug.cc: Added some START_CODE/END_CODE. 2006-08-25 22:08 edwards * lib/: actions/ferm/fermbcs/schroedinger_fermbc_w.h, actions/ferm/fermbcs/simple_fermbc.h, actions/ferm/fermbcs/twisted_fermbc_w.h, actions/ferm/linop/lwldslash_array_pab_w.cc, actions/ferm/linop/lwldslash_array_sse_w.cc, actions/ferm/linop/lwldslash_array_w.cc, actions/ferm/linop/lwldslash_base_w.cc, actions/ferm/linop/prec_dwf_linop_array_w.cc, actions/ferm/linop/prec_slic_linop_w.cc, actions/ferm/linop/prec_wilson_linop_w.cc, actions/ferm/linop/unprec_parwilson_linop_w.cc, actions/ferm/linop/unprec_wilson_linop_w.cc, actions/gauge/gaugeacts/aniso_spectrum_gaugeact.cc, actions/gauge/gaugeacts/lw_1loop_gaugeact.cc, actions/gauge/gaugeacts/lw_tree_gaugeact.cc, actions/gauge/gaugeacts/pg_gaugeact.cc, actions/gauge/gaugeacts/plaq_gaugeact.cc, actions/gauge/gaugeacts/plaq_plus_spatial_two_plaq_gaugeact.cc, actions/gauge/gaugeacts/rbc_gaugeact.cc, actions/gauge/gaugeacts/rect_gaugeact.cc, actions/gauge/gaugeacts/rg_gaugeact.cc, actions/gauge/gaugeacts/spatial_two_plaq_gaugeact.cc, actions/gauge/gaugeacts/wilson_gaugeact.cc, update/molecdyn/hamiltonian/abs_hamiltonian.h, update/molecdyn/hamiltonian/exact_hamiltonian.h, update/molecdyn/hmc/abs_hmc.h, update/molecdyn/hmc/global_metropolis_accrej.cc, update/molecdyn/hmc/global_metropolis_accrej.h, update/molecdyn/hmc/lcm_hmc.h, update/molecdyn/integrator/abs_integrator.h, update/molecdyn/integrator/integrator_aggregate.cc, update/molecdyn/integrator/integrator_aggregate.h, update/molecdyn/integrator/lcm_integrator_leaps.cc, update/molecdyn/integrator/lcm_integrator_leaps.h, update/molecdyn/integrator/lcm_minimum_norm2_integrator.h, update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.cc, update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.h, update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.cc, update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.h, update/molecdyn/integrator/lcm_pqp_leapfrog.h, update/molecdyn/integrator/lcm_pqp_leapfrog_mts.cc, update/molecdyn/integrator/lcm_pqp_leapfrog_mts.h, update/molecdyn/integrator/lcm_sexton_weingarten.cc, update/molecdyn/integrator/lcm_sexton_weingarten.h, update/molecdyn/integrator/lcm_sw_min_mixed.cc, update/molecdyn/integrator/lcm_sw_min_mixed.h, update/molecdyn/integrator/md_integrator_factory.h, update/molecdyn/monomial/fixed_random_ferm_monomial.cc, update/molecdyn/monomial/genapprox.cc, update/molecdyn/monomial/monomial_aggregate_w.cc, update/molecdyn/monomial/one_flavor_rat_monomial5d_w.h, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.h, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.cc, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.h, update/molecdyn/monomial/prec_logdet_ee_monomial_w.cc, update/molecdyn/monomial/prec_logdet_ee_monomial_w.h, update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.cc, update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.h, update/molecdyn/monomial/two_flavor_hasenbusch_monomial5d_w.h, update/molecdyn/monomial/two_flavor_monomial5d_w.h, update/molecdyn/monomial/two_flavor_polynomial_monomial_w.h, update/molecdyn/monomial/two_flavor_polyprec_monomial_w.h, update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.cc, update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial5d_w.cc, update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.cc, update/molecdyn/monomial/unprec_two_flavor_monomial_w.cc, update/molecdyn/predictor/circular_buffer.h, update/molecdyn/predictor/last_solution_predictor.h, update/molecdyn/predictor/linear_extrap_predictor.cc, update/molecdyn/predictor/linear_extrap_predictor.h, update/molecdyn/predictor/lu_solve.cc, update/molecdyn/predictor/lu_solve.h, update/molecdyn/predictor/mre_extrap_predictor.cc, update/molecdyn/predictor/mre_extrap_predictor.h, update/molecdyn/predictor/predictor_aggregate.cc, update/molecdyn/predictor/zero_guess_predictor.cc, update/molecdyn/predictor/zero_guess_predictor.h: Removed dosisms. Added missing START_CODE/END_CODE. Did some indentation. 2006-08-25 19:56 edwards * lib/: actions/ferm/linop/clover_term_base_w.cc, actions/ferm/linop/clover_term_qdp_w.cc, actions/ferm/linop/prec_clover_linop_w.cc, util/gauge/reunit.cc, util/gauge/sun_proj.cc, util/gauge/sun_proj.h, util/gauge/sunfill.cc, util/gauge/sunfill.h, util/gauge/taproj.cc, util/gauge/taproj.h: More doxygen comments, adding missing, START_CODE/END_CODE, and indentation. 2006-08-25 19:46 edwards * lib/util/gauge/: conjgauge.h, constgauge.h, eesu2.h, eesu3.h, eeu1.h, expm12.h, expmat.h, expsu3.cc, gauge.h, gauge_s.h, gauge_startup.cc, hotst.h, rgauge.h, shift2.cc, shift2.h, stag_phases_s.cc, stag_phases_s.h, su2extract.h, sunfill.h, taproj.h, unit_check.cc, unit_check.h, weak_field.h: Removed dosisms. 2006-08-25 16:24 edwards * tests/: hmc/hmc.prec_wilson.out.xml, purgaug/purgaug.out.xml, purgaug/purgaug.sfnonpt.out.xml: Updated regression tests for new plaquette output. 2006-08-25 15:28 edwards * lib/meas/: glue/mesplq.h, inline/glue/inline_plaquette.cc: Added plane_plaq to output of inline measurement. 2006-08-25 13:15 edwards * lib/update/molecdyn/monomial/: gauge_monomial.h, one_flavor_rat_monomial_w.h, prec_logdet_ee_monomial_w.h, two_flavor_hasenbusch_monomial_w.h, two_flavor_monomial_w.h: Added START_CODE() and END_CODE(). 2006-08-24 17:16 tag chroma3-11-1 2006-08-24 17:16 edwards * NEWS: Info on 3.11.1 2006-08-24 17:10 edwards * aclocal.m4, configure: Induced changes 2006-08-24 17:08 edwards * configure.ac: Changed to 3.11.1 2006-08-24 17:07 edwards * tests/: chroma/eig/ritz_Hw-v1.out.xml, chroma/gfix/coulgauge/coulgauge.out.xml, chroma/glue/fuzwilp/fuzwilp.out.xml, chroma/glue/wilslp/wilslp.out.xml, chroma/hadron/bar3ptfn/bar3ptfn.out.xml, chroma/hadron/building_blocks/bb.out.xml, chroma/hadron/hadspec/hadspec.out.xml, chroma/hadron/make_source/dilute.out.xml, chroma/hadron/make_source/make_source.out.xml, chroma/hadron/make_source/source-deriv.out.xml, chroma/hadron/make_source/source-displace.out.xml, chroma/hadron/mesonspec/mesonspec.out.xml, chroma/hadron/mres/mres.out.xml, chroma/hadron/noisy_building_blocks/nbb.out.xml, chroma/hadron/propagator/prec_clover.out.xml, chroma/hadron/propagator/prec_dwf.out.xml, chroma/hadron/propagator/prec_ht_contfrac5d.out.xml, chroma/hadron/propagator/prec_ovext.out.xml, chroma/hadron/propagator/prec_ovlap_contfrac5d.out.xml, chroma/hadron/propagator/prec_parwilson.out.xml, chroma/hadron/propagator/prec_wilson-smearing.out.xml, chroma/hadron/propagator/prec_wilson-twisted.out.xml, chroma/hadron/propagator/prec_wilson.out.xml, chroma/hadron/propagator/prec_zolo_nef.out.xml, chroma/hadron/propagator/unprec-ovlap-zolo4d.out.xml, chroma/hadron/propagator/unprec-zolo-ev-multi.out.xml, chroma/hadron/propagator/unprec_clover.out.xml, chroma/hadron/propagator/unprec_dwftransf.out.xml, chroma/hadron/propagator/unprec_hamberwu.out.xml, chroma/hadron/propagator/unprec_ovext.out.xml, chroma/hadron/propagator/unprec_ovlap_contfrac5d.out.xml, chroma/hadron/propagator/unprec_zolo_nef.out.xml, chroma/hadron/seqsource/seqsource-baryon.out.xml, chroma/hadron/seqsource/seqsource-meson.out.xml, chroma/hadron/seqsource/seqsource-photon.out.xml, chroma/hadron/sink_smear/sink-deriv.out.xml, chroma/hadron/sink_smear/sink-displace.out.xml, chroma/hadron/sink_smear/sink_smearing.out.xml, chroma/hadron/spectrum/spectrum.out.xml, chroma/hadron/spectrumOct/spectrumOct-v11.out.xml, chroma/hadron/stoch_baryon/stoch_baryon.out.xml, chroma/hadron/stoch_meson/stoch_meson.out.xml, chroma/hadron_s/spectrum_s/spectrum_s.out.xml, chroma/io/nersc_read_obj/nersc_read_obj.out.xml, chroma/io/nersc_write_obj/nersc_write_obj.out.xml, chroma/io/qio_read_obj/qio_read_obj.out.xml, chroma/io/qio_write_obj/qio_write_obj.out.xml, chroma/io/szin_read_obj/szin_read_obj.out.xml, chroma/io/szin_write_obj/szin_write_obj.out.xml, chroma/schrfun/schrfun.out.xml, chroma/smear/link_smear/link_smear.out.xml, hmc/hmc.prec_wilson.out.xml, purgaug/purgaug.out.xml, purgaug/purgaug.sfnonpt.out.xml, spectrum_s/regres.pl, spectrum_s/spectrum_s.ini.xml, spectrum_s/spectrum_s.out.xml, spectrum_s/spectrum_s.xml, spectrum_s/spectrum_s_reg.xml, spectrum_s/spectrum_s_reg_test_output.xml, spectrum_s/spectrum_s_test_output.xml, t_leapfrog/t_leapfrog.aniso_spectrum.out.xml, t_leapfrog/t_leapfrog.fixed_X_action_stout.out.xml, t_leapfrog/t_leapfrog.lw.sfnonpt.out.xml, t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.out.xml, t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.out.xml, t_leapfrog/t_leapfrog.parwilson_pqp_integrator_mts.out.xml, t_leapfrog/t_leapfrog.prec_1flav_dwf.out.xml, t_leapfrog/t_leapfrog.prec_1flav_wilson.out.xml, t_leapfrog/t_leapfrog.prec_2flav_clover.out.xml, t_leapfrog/t_leapfrog.prec_2flav_clover.sfnonpt.out.xml, t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.out.xml, t_leapfrog/t_leapfrog.prec_clover_stout.out.xml, t_leapfrog/t_leapfrog.prec_contfrac.out.xml, t_leapfrog/t_leapfrog.prec_dwf.out.xml, t_leapfrog/t_leapfrog.prec_hasenbusch_wilson.out.xml, t_leapfrog/t_leapfrog.prec_parwilson.out.xml, t_leapfrog/t_leapfrog.prec_wilson.out.xml, t_leapfrog/t_leapfrog.rect_gaugeact.out.xml, t_leapfrog/t_leapfrog.rect_gaugeact_1.out.xml, t_leapfrog/t_leapfrog.rect_gaugeact_aniso.out.xml, t_leapfrog/t_leapfrog.rect_gaugeact_c1t0.out.xml, t_leapfrog/t_leapfrog.rect_gaugeact_omit2linkT.out.xml, t_leapfrog/t_leapfrog.two_plaq_spatial_gaugeact.out.xml, t_leapfrog/t_leapfrog.unprec_clover.out.xml, t_leapfrog/t_leapfrog.unprec_dwf.out.xml, t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.out.xml, t_leapfrog/t_leapfrog.unprec_wilson.out.xml: Regenerated all canonical outputs because of the change of output from the plaquette measurement. Also, the newest QDP now has more precision on double output. 2006-08-24 17:04 edwards * lib/meas/: glue/mesplq.cc, glue/polylp.cc, glue/polylp.h, inline/glue/inline_polylp.cc: Rearranged plaquette measurement a bit. Have added measurement of all possible planes. Added an overloading of polylp. 2006-08-24 00:19 edwards * tests/chroma/hadron/: spectrum/spectrum.metric.xml, spectrumOct/spectrumOct-v11.metric.xml: Changed pion tests to use complex. 2006-08-23 23:18 edwards * lib/meas/glue/block.cc: Removed redundant calc of u_dble. 2006-08-23 23:14 edwards * lib/meas/glue/block.cc: Small code tidies. 2006-08-23 23:14 edwards * lib/util/gauge/shift2.h: Added doxygen comments. 2006-08-23 22:37 edwards * lib/Makefile.am: Added in block, fuzglue, polycor, gluecor. 2006-08-23 22:34 edwards * lib/util/gauge/: shift2.cc, shift2.h: A power of 2 shift of a gauge field. 2006-08-23 22:34 edwards * lib/meas/smear/ape_smear.cc: Moved shift to chroma/lib/util/gauge. 2006-08-23 22:33 edwards * lib/meas/glue/: block.cc, block.h, fuzglue.cc, fuzglue.h, gluecor.cc, gluecor.h, polycor.cc, polycor.h: Converted from szin. 2006-08-21 03:32 edwards * lib/actions/ferm/fermacts/prec_clover_fermact_w.cc: Removed all remnants of Stout hacks. 2006-08-20 16:13 edwards * tests/t_leapfrog/t_leapfrog.prec_2flav_clover-stout3d.ini.xml: Removed since replaced by another file. 2006-08-19 15:29 tag chroma3-11-0 2006-08-19 15:29 flemingg * NEWS, configure, configure.ac, lib/meas/hadron/hybmeson_w.cc, lib/meas/hadron/mesons_w.cc, lib/meas/inline/hadron/inline_bar3ptfn_w.cc, lib/meas/inline/hadron/inline_building_blocks_w.cc, lib/meas/inline/hadron/inline_hadspec_w.cc, lib/meas/inline/hadron/inline_mesonspec_w.cc, lib/meas/inline/hadron/inline_noisy_building_blocks_w.cc, lib/meas/inline/hadron/inline_qqqNucNuc_w.cc, lib/meas/inline/hadron/inline_spectrumOct_w.cc, lib/meas/inline/hadron/inline_spectrum_w.cc, lib/util/ft/sftmom.cc, lib/util/ft/sftmom.h, tests/chroma/hadron/bar3ptfn/bar3ptfn.out.xml, tests/chroma/hadron/building_blocks/bb.dat.xml, tests/chroma/hadron/building_blocks/bb.out.xml, tests/chroma/hadron/hadspec/hadspec.out.xml, tests/chroma/hadron/mesonspec/mesonspec.out.xml, tests/chroma/hadron/noisy_building_blocks/nbb.dat_0.xml, tests/chroma/hadron/noisy_building_blocks/nbb.dat_1.xml, tests/chroma/hadron/noisy_building_blocks/nbb.out.xml, tests/chroma/hadron/qqqNucNuc/qqqNucNuc.out.xml, tests/chroma/hadron/spectrum/spectrum.out.xml, tests/chroma/hadron/spectrumOct/spectrumOct-v11.out.xml: Changed the interface of the slow Fourier transform (SftMom) class to allow for any lattice point to be chosen as the spatial origin. Previously, this meant that the origin was always implicitly (0,0,0,0), which lead to various phase problems. One example is 2pt correlation functions between a point source not at the origin and a sink at non-zero momentum: the overall phase depends upon the location of the source. Using the new interface, the phase can be made independent of the location of the source by choosing the origin of the Fourier transform to be the location of the source. Several things remain to be fixed: (1) sequential sources at non-zero sink momentum, (2) building blocks with link paths which cross boundaries, (3) baryonic sequential sources where t_source > t_sink, i.e. the boundary is between the source and sink. 2006-08-18 17:51 tag chroma3-10-5 2006-08-18 17:51 tag pre-chroma3-11-0 2006-08-18 17:51 bjoo * lib/update/molecdyn/monomial/fixed_random_ferm_monomial.cc: Added regressions for stout states 2006-08-18 17:50 bjoo * tests/t_leapfrog/regres.pl: Added the stout smearing to the t_leapfrog regressions 2006-08-18 17:39 bjoo * tests/t_leapfrog/: t_leapfrog.fixed_X_action_stout.ini.xml, t_leapfrog.fixed_X_action_stout.metric.xml, t_leapfrog.fixed_X_action_stout.out.xml, t_leapfrog.prec_clover_stout.ini.xml, t_leapfrog.prec_clover_stout.metric.xml, t_leapfrog.prec_clover_stout.out.xml: Output and metric files 2006-08-18 17:16 edwards * lib/actions/ferm/fermacts/prec_wilson_fermact_w.cc: Removed unneeded dependence on stout_fermstate. 2006-08-18 16:17 bjoo * lib/actions/ferm/fermacts/: stout_fermstate_params.cc, stout_fermstate_w.cc: Checked corner case where thin link is unit gauge, or where rho_munu=0. No longer produces NaNs but still not quite right for unit gauge. Rho munu case is instead done by not smearing in that direction at all 2006-08-18 12:03 edwards * aclocal.m4, configure: Induced changes 2006-08-18 12:02 edwards * configure.ac: Changed to 3.10.4 2006-08-18 11:59 edwards * NEWS: Info on 3.10.4 2006-08-18 11:51 edwards * lib/: actions/ferm/fermacts/ferm_createstate_aggregate_s.cc, actions/ferm/fermacts/ferm_createstate_aggregate_w.cc, actions/ferm/fermacts/ferm_createstate_reader_s.cc, actions/ferm/fermacts/ferm_createstate_reader_w.cc, actions/ferm/fermacts/fermacts_aggregate_w.cc, actions/ferm/fermbcs/fermbcs_aggregate_s.cc, actions/ferm/fermbcs/fermbcs_aggregate_w.cc, actions/ferm/fermbcs/fermbcs_reader_s.cc, actions/ferm/fermbcs/fermbcs_reader_s.h, actions/ferm/fermbcs/fermbcs_reader_w.cc, actions/ferm/invert/multi_syssolver_mdagm_aggregate.cc, actions/ferm/invert/syssolver_linop_aggregate.cc, actions/ferm/invert/syssolver_mdagm_aggregate.cc, actions/ferm/invert/syssolver_polyprec_aggregate.cc, actions/ferm/linop/llincomb.h, actions/ferm/qprop/nef_quarkprop4_w.h, actions/ferm/qprop/quarkprop4_s.cc, actions/gauge/gaugeacts/gauge_createstate_aggregate.cc, actions/gauge/gaugeacts/gaugeacts_aggregate.cc, actions/gauge/gaugebcs/gaugebc_aggregate.cc, meas/inline/hadron/inline_polar_source_w.cc: Removed dos-isms. 2006-08-17 16:56 tag chroma3-10-4 2006-08-17 16:56 bjoo * mainprogs/tests/: t_leapfrog.cc, t_stout_state.cc: OPtimized and bugfixed 2006-08-17 16:50 bjoo * tests/t_leapfrog/: t_leapfrog.fixed_X_action_stout.ini.xml, t_leapfrog.prec_clover_stout.ini.xml: Test .ini files for t_leapfrog with stout states 2006-08-17 16:45 bjoo * lib/actions/ferm/fermacts/: fermacts_w.h, stout_fermstate_params.cc, stout_fermstate_w.cc, stout_fermstate_w.h: Optimised stout_fermstate fixed bug with orthog dir 2006-08-17 13:16 edwards * tests/purgaug/: purgaug.ini.xml, purgaug.metric.xml, purgaug.out.xml: Updated again. 2006-08-16 21:47 edwards * mainprogs/main/purgaug.cc: Overhauled how update number is used and warmups. Also changed how checkpoints are written. 2006-08-16 21:42 edwards * tests/purgaug/: purgaug.ini.xml, purgaug.out.xml, purgaug.sfnonpt.out.xml: Updated 2006-08-16 13:10 bjoo * lib/: Makefile.am, handle.h, actions/ferm/fermacts/ferm_createstate_aggregate_w.cc, actions/ferm/fermacts/fermacts_aggregate_w.cc, actions/ferm/fermacts/prec_slic_fermact_w.cc, actions/ferm/fermacts/prec_slic_fermact_w.h, actions/ferm/fermacts/stout_fermstate_w.cc, actions/ferm/fermacts/stout_fermstate_w.h, actions/ferm/linop/prec_slic_linop_w.cc, actions/ferm/linop/prec_slic_linop_w.h, meas/hadron/simple_baryon_operator_w.cc, update/molecdyn/integrator/lcm_integrator_leaps.cc: Added SLIC fermions 2006-08-16 11:44 edwards * tests/regres.pl: Turned regression tests back on. 2006-08-15 17:54 tag chroma3-10-3 2006-08-15 17:54 bjoo * NEWS, configure: Added to news about v3.10.3 and made note in NEWS about the meaning of nontrivialP() changing for FermBCs 2006-08-15 17:48 bjoo * configure.ac: Moved version tag to 3.10.3 2006-08-15 17:45 bjoo * lib/: fermbc.h, actions/ferm/fermacts/stout_fermstate_w.cc, actions/ferm/fermacts/stout_fermstate_w.h, actions/ferm/fermbcs/simple_fermbc.h: Hacked stout_fermstate to handle SF, PERIODIC, ANTIPERIODIC and DIRICHLET boundaries. TWISTED is not yet expected to work as its modif() operation is not its own inverse 2006-08-15 11:40 bjoo * mainprogs/tests/t_stout_state.cc: Merge complete. Stout links work fine for NONPERT SF boundaries, and also for periodic and hopefully zero boundaries. Still worried about antiperiodic ones and possibly twisted ones 2006-08-15 09:17 bjoo * aclocal.m4, lib/Makefile.am, lib/fermbc.h, lib/state.h, lib/actions/ferm/fermacts/prec_clover_fermact_w.cc, lib/actions/ferm/fermacts/prec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/stout_fermstate_w.cc, lib/actions/ferm/fermacts/stout_fermstate_w.h, lib/update/molecdyn/integrator/lcm_integrator_leaps.cc, lib/util/gauge/expmat.cc, lib/util/gauge/expmat.h, lib/util/gauge/reunit.cc, lib/util/gauge/reunit.h, lib/util/gauge/taproj.cc, lib/util/gauge/taproj.h, mainprogs/tests/t_leapfrog.cc, mainprogs/tests/t_stout_state.cc, tests/regres.pl: Just merging in some stout stuff, update patches and other minor things. No label. Needs regression run 2006-08-15 09:09 bjoo * lib/update/molecdyn/monomial/: fixed_random_ferm_monomial.cc, fixed_random_ferm_monomial.h, monomial_aggregate_w.cc, two_flavor_monomial_w.h: Added a monomial to do a simple action of 2 Re Tr (UX) where X is a fixed SU(3) field 2006-08-13 15:34 edwards * lib/actions/ferm/fermacts/stout_fermstate_w.h: Removed StoutFermState on getFsAndBs. Causes gcc4 to complain. 2006-08-13 15:30 edwards * lib/actions/ferm/fermacts/: stout_fermstate_w.cc, stout_fermstate_w.h: Removed the extraneous "const" on a "const bool" argument. 2006-08-12 21:11 bjoo * lib/actions/ferm/fermacts/: stout_fermstate_w.cc, stout_fermstate_w.h: Now scales as dt**2 over a traj of length 1. Hooray! Now just need to worry about bc-s 2006-08-11 14:12 edwards * lib/Makefile.am: Removed obsolete inline ape, hyp and stout smear. 2006-08-11 14:11 edwards * lib/meas/: inline/smear/inline_ape_smear.cc, inline/smear/inline_ape_smear.h, inline/smear/inline_hyp_smear.cc, inline/smear/inline_hyp_smear.h, inline/smear/inline_smear_aggregate.cc, inline/smear/inline_stout_smear.cc, inline/smear/inline_stout_smear.h, inline/smear/smear.h, smear/stout_link_smearing.cc, smear/stout_link_smearing.h, smear/stout_smear.cc, smear/stout_smear.h: Removed obsolete inline versions of ape, hyp and stout smear in favor of link smear. Added a smear_dirs to stout_smear 2006-08-11 14:10 edwards * tests/chroma/smear/: ape_smear/ape_smear.ini.xml, ape_smear/ape_smear.out.xml, hyp_smear/hyp_smear_v4.ini.xml, hyp_smear/hyp_smear_v4.out.xml, stout_smear/stout_smear_v2.ini.xml, stout_smear/stout_smear_v2.out.xml: Removed obsolete tests. Now uses link_smear instead. 2006-08-11 14:10 edwards * tests/chroma/smear/link_smear/: link_smear.ini.xml, link_smear.out.xml: Updated tests for new version of stout_smear 2006-08-11 12:13 edwards * lib/meas/smear/: ape_smear.cc, ape_smear.h, fuzz_smear.cc, fuzz_smear.h, hyp_smear.cc, hyp_smear.h, hyp_smear3d.cc, hyp_smear3d.h, laplacian.cc, laplacian.h, quark_displacement_factory.h, quark_smearing_factory.h, stout_smear.cc, stout_smear.h, wvfkind.h: Added doxygen comments and some indentation. 2006-08-11 11:23 edwards * aclocal.m4, configure: Induced changes 2006-08-11 11:23 edwards * configure.ac: Changed to 3.10.2 2006-08-07 14:16 edwards * tests/t_stout_state/t_stout_state.out.xml: Fixed output. 2006-08-07 14:13 edwards * lib/actions/ferm/fermacts/: stout_fermstate_params.cc, stout_fermstate_params.h: Added sm_fact. 2006-08-07 14:09 edwards * tests/t_stout_state/: t_stout_state.ini.xml, t_stout_state.out.xml: Change in params. 2006-08-07 00:06 edwards * mainprogs/tests/t_stout_state.cc: Fix. Seems to actually work! 2006-08-07 00:06 edwards * tests/t_stout_state/: t_stout_state.ini.xml, t_stout_state.out.xml, t_stout_state.xml.ini: New input and output. 2006-08-06 23:40 edwards * lib/actions/ferm/fermacts/: stout_fermstate_params.cc, stout_fermstate_params.h: Added default constructor. 2006-08-06 23:38 edwards * mainprogs/tests/t_stout_state.cc: Changed fat_force to fat_force2 2006-08-06 23:36 edwards * mainprogs/tests/Makefile.am: Moved some t_stout_state, t_aniso_gaugeact and t_gauge_force up to CHECK_PROGRAMS 2006-08-06 12:40 edwards * mainprogs/tests/t_stout_state.cc: Now compiles. However, the use of an UnprecWilsonLinOp is rather pointless since no gauge fields are actually inside there. We want to test just the state deriv. 2006-08-06 11:57 edwards * lib/actions/gauge/gaugeacts/gaugeacts.h: Added simple_gaugestate.h 2006-08-06 11:57 edwards * mainprogs/tests/t_gauge_force.cc: Compiles with new interface. 2006-08-05 19:31 edwards * mainprogs/main/chroma.cc: Changed printing of linkage. 2006-08-05 19:30 edwards * mainprogs/: tests/t_leapfrog.cc, main/hmc.cc: Added printing of linkage. 2006-08-05 19:29 edwards * mainprogs/main/chroma.cc: Oops - little fix in printing linkage. 2006-08-05 19:28 edwards * mainprogs/main/chroma.cc: Added a check of linkage 2006-08-04 19:56 edwards * tests/t_leapfrog/t_leapfrog.prec_2flav_clover-stout3d.ini.xml: Added tests 2006-08-04 19:56 edwards * tests/chroma/hadron/propagator/prec_clover-stout3d.ini.xml: More tests. 2006-08-04 19:54 edwards * lib/actions/ferm/fermacts/prec_clover_fermact_w.cc: Added some funny test code. 2006-08-04 19:52 edwards * lib/actions/ferm/fermacts/stout_fermstate_w.cc: Bug fixes and lots of checking. Still not quite correct, but getting there. 2006-08-03 17:58 edwards * tests/chroma/hadron/propagator/prec_clover-stout3d.ini.xml: Stout param file 2006-08-03 17:14 edwards * lib/actions/ferm/fermacts/: stout_fermstate_params.cc, stout_fermstate_params.h, stout_fermstate_w.cc, stout_fermstate_w.h: Changed interface to use a createfermstate. Move initialization of params off to a params struct. 2006-08-03 17:13 edwards * lib/actions/ferm/fermacts/prec_clover_fermact_w.cc: Added probably unnecessary linking of createfermstate. 2006-08-03 17:12 edwards * lib/actions/ferm/fermacts/ferm_createstate_aggregate_w.cc: Added create stout fermstate 2006-08-03 14:58 edwards * aclocal.m4: Induced changes. 2006-08-03 14:55 edwards * lib/actions/ferm/fermacts/: stout_fermstate_w.cc, stout_fermstate_w.h: New version of stout codes. 2006-08-03 14:54 edwards * lib/actions/ferm/fermacts/extfield_fermstate_w.cc: Had to comment out the code. 2006-08-03 14:54 edwards * lib/Makefile.am: Added new fermstate for stout and some commented out flic files. 2006-08-02 00:10 edwards * lib/actions/ferm/fermacts/: stout_fermstate_params.cc, stout_fermstate_params.h: Stout params. 2006-08-01 11:58 edwards * NEWS: Info on 3.10.1 and 3.10.2 2006-07-22 15:36 tag chroma3-10-2 2006-07-22 15:36 edwards * lib/meas/inline/eig/inline_eigbnds.cc: Added more profiling. 2006-07-22 15:35 edwards * tests/chroma/eig/eigbnds-v1.out.xml: UPdated output. 2006-07-22 13:44 edwards * lib/meas/inline/eig/: inline_eigbnds.cc, inline_eigbnds.h: Added xml file writing. 2006-07-22 13:34 edwards * lib/meas/inline/eig/inline_eigbnds.cc: Bug fix. Limit profiling to the subset over which the operator is defined. 2006-07-21 20:55 bjoo * mainprogs/tests/t_leapfrog.cc: Added hooks to time aniso spectrum gaugeacts part - this is harmless and should just print 0 for other actions 2006-07-21 20:54 bjoo * lib/actions/gauge/gaugeacts/: plaq_plus_spatial_two_plaq_gaugeact.cc, plaq_plus_spatial_two_plaq_gaugeact.h, rect_gaugeact.cc, rect_gaugeact.h: Added timing for forces and swapped a few calls to map more optimally onto faster QDP++ functions 2006-07-21 16:47 edwards * tests/chroma/eig/eigbnds-v1.out.xml: Updated output. 2006-07-21 16:42 edwards * lib/meas/inline/eig/inline_eigbnds.cc: Added printing of eigenvector profile. 2006-07-21 14:53 edwards * lib/actions/gauge/gaugeacts/plaq_plus_spatial_two_plaq_gaugeact.h: Changed tDir() to always return aniso.t_dir. 2006-07-21 14:40 tag chroma3-10-1 2006-07-21 14:40 bjoo * aclocal.m4, lib/Makefile.am: Induced changes 2006-07-21 14:39 bjoo * lib/actions/gauge/gaugeacts/: aniso_spectrum_gaugeact.cc, aniso_spectrum_gaugeact.h, gaugeacts.h, gaugeacts_aggregate.cc, plaq_plus_spatial_two_plaq_gaugeact.cc, rect_gaugeact.cc, spatial_two_plaq_gaugeact.cc: New ANiso Gaugeact passes regressions for old one. 2006-07-21 14:35 bjoo * mainprogs/tests/: Makefile.am, t_aniso_gaugeact.cc: Checks gauge actions for consistency 2006-07-21 10:58 bjoo * lib/actions/gauge/gaugeacts/: gaugeacts_aggregate.cc, plaq_plus_spatial_two_plaq_gaugeact.cc, plaq_plus_spatial_two_plaq_gaugeact.h: Added a combined plaquette plus spatial two plaquette term gives a 20-25% speed improvement 2006-07-20 22:33 edwards * tests/t_leapfrog/regres.pl: Changed regression to point to aniso_spectrum 2006-07-20 22:31 edwards * tests/chroma/hadron/propagator/prec_dwf.out.xml: Updated regression test. 2006-07-20 16:28 edwards * lib/actions/ferm/fermacts/: extfield.h, extfield_fermstate_w.cc: Initial version. 2006-07-20 16:23 edwards * aclocal.m4: Induce changs. 2006-07-20 16:21 edwards * lib/actions/gauge/gaugeacts/: aniso_spectrum_gaugeact.cc, aniso_spectrum_gaugeact.h: Changed u0s and u0t to u_s and u_t. 2006-07-20 16:21 edwards * tests/t_leapfrog/: t_leapfrog.aniso_spectrum.ini.xml, t_leapfrog.aniso_spectrum.metric.xml, t_leapfrog.aniso_spectrum.out.xml, t_leapfrog.morningstar_peardon_aniso.ini.xml, t_leapfrog.morningstar_peardon_aniso.metric.xml, t_leapfrog.morningstar_peardon_aniso.out.xml: Switched morningstar_peardon to aniso_spectrum. Updated output. 2006-07-20 16:08 edwards * tests/chroma/hadron/propagator/prec_clover_extfield.ini.xml: Added external field clover. 2006-07-20 16:07 edwards * lib/Makefile.am: Added external field version of clover. Added aniso_spectrum_gaugeact. 2006-07-20 16:06 edwards * lib/actions/ferm/: fermacts/extfield_aggregate_w.cc, fermacts/extfield_aggregate_w.h, fermacts/extfield_factory_w.h, fermacts/extfield_fermstate_w.h, fermacts/fermacts_aggregate_w.cc, fermacts/prec_clover_extfield_fermact_w.cc, fermacts/prec_clover_extfield_fermact_w.h, linop/prec_clover_extfield_linop_w.cc, linop/prec_clover_extfield_linop_w.h: Added external field version of clover. 2006-07-20 16:06 edwards * lib/actions/ferm/linop/: clover_term_qdp_w.cc, clover_term_qdp_w.h: Removed & from create call. 2006-07-20 16:05 edwards * lib/actions/ferm/qprop/dwf_quarkprop4_w.cc: Added norm. 2006-07-20 15:53 edwards * lib/actions/gauge/gaugeacts/: aniso_spectrum_gaugeact.cc, aniso_spectrum_gaugeact.h, gaugeacts_aggregate.cc, mp_gaugeact.cc, mp_gaugeact.h: Moved MP to AnisoSpectrum. 2006-07-20 14:40 edwards * lib/actions/gauge/gaugeacts/: aniso_spectrum_gaugeact.cc, aniso_spectrum_gaugeact.h: First version (incorrect params) of Morningstar/Peardon gaugeact. 2006-07-20 14:36 bjoo * tests/t_leapfrog/regres.pl: Added Morningstar Peardon test 2006-07-20 14:27 bjoo * tests/t_leapfrog/: t_leapfrog.morningstar_peardon_aniso.ini.xml, t_leapfrog.morningstar_peardon_aniso.metric.xml, t_leapfrog.morningstar_peardon_aniso.out.xml: Regression tests form morningstar peardon type gaugeaction 2006-07-20 14:24 bjoo * lib/actions/gauge/gaugeacts/: gaugeacts_aggregate.cc, mp_gaugeact.cc, mp_gaugeact.h: mp_gaugeact works 2006-07-20 14:03 bjoo * lib/Makefile.am: Added mp gaugeact stuff 2006-07-20 14:03 bjoo * lib/actions/gauge/gaugeacts/: mp_gaugeact.cc, mp_gaugeact.h: First stab at a Morningstar-Peardon Gauge Action 2006-07-20 11:58 bjoo * tests/t_leapfrog/regres.pl: added regression 2006-07-20 11:56 bjoo * lib/actions/gauge/gaugeacts/gaugeacts_aggregate.cc: Added two plaq spatial gaugeact to aggregate 2006-07-20 11:52 bjoo * lib/actions/gauge/gaugeacts/: plaq_gaugeact.cc, plaq_gaugeact.h: Modified PlaqGaugeact to be able to take separate spatial and temporal plaq coeffs 2006-07-20 11:14 bjoo * tests/t_leapfrog/regres.pl: Added 2 plaq spatial gaugeact test 2006-07-20 11:03 bjoo * tests/t_leapfrog/: t_leapfrog.two_plaq_spatial_gaugeact.ini.xml, t_leapfrog.two_plaq_spatial_gaugeact.metric.xml, t_leapfrog.two_plaq_spatial_gaugeact.out.xml: Test files for 2 plaq spatial gauge act 2006-07-20 11:00 bjoo * lib/actions/gauge/gaugeacts/spatial_two_plaq_gaugeact.cc: Two Plaq Spatial Now Conserves energy as dt\^2 2006-07-19 17:42 bjoo * lib/actions/gauge/gaugeacts/: spatial_two_plaq_gaugeact.cc, spatial_two_plaq_gaugeact.h: Doesn't work yet versions of SpatialTwoPlaqGaugeAct 2006-07-19 13:20 bjoo * aclocal.m4: Induced changes 2006-07-19 13:19 bjoo * lib/Makefile.am: Added spatial_two_plaq_gaugeact 2006-07-18 22:28 bjoo * lib/actions/gauge/gaugeacts/rect_gaugeact.cc: Added anisotropy 2006-07-18 22:22 bjoo * tests/t_leapfrog/regres.pl: Removed fake_aniso 2006-07-18 22:15 bjoo * tests/t_leapfrog/: t_leapfrog.rect_gaugeact_aniso.ini.xml, t_leapfrog.rect_gaugeact_aniso.metric.xml, t_leapfrog.rect_gaugeact_aniso.out.xml: Aniso version 2006-07-18 21:56 bjoo * tests/t_leapfrog/: t_leapfrog.rect_gaugeact_omit2linkT.ini.xml, t_leapfrog.rect_gaugeact_omit2linkT.metric.xml, t_leapfrog.rect_gaugeact_omit2linkT.out.xml: omit loops of length 2 in time - has to agree with the case where time is not ommitted but has coeff 0. It does 2006-07-18 21:48 bjoo * tests/t_leapfrog/: t_leapfrog.rect_gaugeact_c1t0.ini.xml, t_leapfrog.rect_gaugeact_c1t0.metric.xml, t_leapfrog.rect_gaugeact_c1t0.out.xml: Set c1t to zero but not omit it 2006-07-18 21:42 bjoo * tests/t_leapfrog/: t_leapfrog.rect_gaugeact_1.ini.xml, t_leapfrog.rect_gaugeact_1.metric.xml, t_leapfrog.rect_gaugeact_1.out.xml: Regression files for rect gaugeact with fake anisotropy. It is anisotropic but the anisotropic coefficients are 1 and all links are used 2006-07-17 16:23 tag chroma3-10-0 2006-07-17 16:23 edwards * aclocal.m4, configure: Induced changes 2006-07-17 16:22 edwards * lib/: Makefile.am, meas/hadron/curcor3_w.cc, meas/hadron/curcor3_w.h: Added a non-functioning curcor3 . 2006-07-17 16:21 edwards * configure.ac: Changed to 3.10.0 2006-07-17 16:21 edwards * NEWS: Info on 3.10.0 2006-07-17 16:19 edwards * lib/meas/inline/hadron/: inline_spectrum_w.cc, inline_spectrum_w.h: Added BlkMax and BlkAccu. 2006-07-17 16:19 edwards * tests/chroma/hadron/spectrum/spectrum.out.xml: Updated. 2006-07-17 16:15 edwards * tests/chroma/hadron/spectrum/: spectrum.ini.xml, spectrum.out.xml: Changed to version 13 on input and have new BlkMax and BlkAccu flags. 2006-07-16 15:13 edwards * tests/hmc/hmc.prec_wilson.out.xml: Uses a more sensible floating point output. 2006-07-16 14:20 edwards * tests/hmc/hmc.prec_wilson.out.xml: Updated output. 2006-07-15 17:41 edwards * mainprogs/main/hmc.cc: Added timing output 2006-07-14 16:33 bjoo * lib/actions/gauge/gaugeacts/: rect_gaugeact.cc, rect_gaugeact.h: First cut at anisotropy. Passes isotropic regressions, but screws up for actual anisotropy it seems when looking at energy conservation 2006-07-14 16:21 bjoo * tests/t_leapfrog/: t_leapfrog.rect_gaugeact.ini.xml, t_leapfrog.rect_gaugeact.metric.xml, t_leapfrog.rect_gaugeact.out.xml: Test file for isotropic rectangle gauge act 2006-07-12 00:55 edwards * lib/meas/inline/eig/: inline_eigbnds.cc, inline_eigbnds.h: Changed to use GroupXML_t for ferm_act. This fixes some path problem when used under hmc.cc 2006-07-11 00:21 tag chroma3-9-0 2006-07-11 00:21 edwards * tests/purgaug/: purgaug.ini.xml, purgaug.out.xml, purgaug.sfnonpt.ini.xml, purgaug.sfnonpt.out.xml: Changed WILSLP frequency to 1. 2006-07-11 00:18 edwards * tests/purgaug/: purgaug.ini.xml, purgaug.out.xml, purgaug.sfnonpt.ini.xml, purgaug.sfnonpt.out.xml: Fixed to new form of Wilson loops. 2006-07-11 00:08 edwards * NEWS: Info on 3.9.0 2006-07-11 00:06 edwards * aclocal.m4, configure: Induced changes 2006-07-11 00:06 edwards * configure.ac: Changed to 3.9.0 2006-07-11 00:04 edwards * tests/chroma/hadron/hadspec/hadspec.metric.xml: Fixed to work. 2006-07-11 00:04 edwards * tests/regres.pl: New regressions. 2006-07-10 23:54 edwards * tests/chroma/hadron/mesonspec/mesonspec.out.xml: Updated some. 2006-07-10 23:51 edwards * lib/meas/inline/hadron/: inline_hadspec_w.cc, inline_hadspec_w.h: Changed to new input/output versions. 2006-07-10 23:51 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Added a const to readAllSinks. 2006-07-10 23:50 edwards * lib/Makefile.am: Added mesons2_w.{h,cc} 2006-07-10 23:49 edwards * tests/chroma/hadron/hadspec/: hadspec.ini.xml, hadspec.out.xml: New form of output. 2006-07-10 15:53 edwards * lib/meas/hadron/: mesons2_w.h, mesons2_w.cc: A complex version. 2006-07-10 15:52 edwards * tests/chroma/hadron/spectrum/: spectrum-v12.ini.xml, spectrum-v12.out.xml: Removed these 2006-07-10 15:52 edwards * tests/chroma/hadron/spectrum/regres.pl: Removed -v12 2006-07-10 15:51 edwards * tests/chroma/hadron/spectrum/: spectrum-v12.metric.xml, spectrum.ini.xml, spectrum.metric.xml, spectrum.out.xml: Moved from -v12 to just spectrum 2006-07-10 15:44 edwards * lib/meas/inline/hadron/: inline_mesonspec_w.cc, inline_mesonspec_w.h: Changed to use a "factor" instead of PLUS/MINUS. 2006-07-10 15:44 edwards * lib/meas/inline/hadron/inline_hadron_aggregate.cc: Turned on hadspec. 2006-07-10 15:43 edwards * lib/meas/inline/hadron/: inline_hadspec_w.cc, inline_hadspec_w.h: First working version. 2006-07-10 15:18 edwards * tests/chroma/hadron/hadspec/: hadspec.ini.xml, hadspec.out.xml: Switched to HADRON_SPECTRUM for task name. 2006-07-10 15:17 edwards * tests/chroma/hadron/mesonspec/: mesonspec.ini.xml, mesonspec.out.xml: Changed from "operation" to "factor" 2006-07-10 15:04 edwards * lib/meas/inline/glue/: inline_wilslp.cc, inline_wilslp.h: Added GaugeBC reading. 2006-07-10 15:03 edwards * tests/chroma/hadron/hadspec/: hadspec.ini.xml, hadspec.metric.xml, hadspec.out.xml, regres.pl: First versions. 2006-07-10 14:31 edwards * tests/chroma/glue/wilslp/: wilslp.ini.xml, wilslp.metric.xml, wilslp.out.xml: Added test of nontrivial gaugebcs 2006-07-10 14:27 edwards * tests/chroma/glue/wilslp/: wilslp.ini.xml, wilslp.out.xml: Now use gaugebc 2006-07-10 13:05 tag chroma3-8-2 2006-07-10 13:05 edwards * NEWS: Info on 3.8.2 2006-07-10 13:03 edwards * aclocal.m4, configure: Induced changes 2006-07-10 13:03 edwards * configure.ac: Changed to 3.8.2 2006-07-08 00:34 edwards * lib/meas/glue/wilslp.cc: Another small fix to handle t_dir not in the j_decay direction. 2006-07-06 15:51 tag chroma3-8-1 2006-07-06 15:51 edwards * tests/chroma/glue/wilslp/wilslp.ini.xml: Changed to include wils_loop1 2006-07-06 13:53 edwards * aclocal.m4, configure: Induced changes 2006-07-06 13:50 edwards * configure.ac: Changed to 3.8.1 2006-07-06 13:49 edwards * NEWS: Infon on 3.8.1 2006-07-06 13:44 edwards * tests/chroma/glue/wilslp/wilslp.out.xml: Turned on wils_loop1 2006-07-06 13:43 edwards * tests/chroma/glue/wilslp/wilslp.out.xml: Updated output 2006-07-05 15:22 edwards * lib/meas/glue/wilslp.cc: Fixes to support asymmetric lattice sizes (note, I mean asymmetric and not necessarily anisotropic). 2006-07-04 13:00 tag chroma3-8-0 2006-07-04 13:00 edwards * NEWS: Info on 3.8.0 2006-07-03 23:29 edwards * mainprogs/main/wallformfac.cc: Fixed source_type to new conventions. 2006-07-03 23:25 edwards * lib/actions/ferm/qprop/: prec_dwf_qprop_array_altivec_w.cc, prec_dwf_qprop_array_altivec_w.h, prec_dwf_qprop_array_sse_w.cc: Fixed to use SysSolverCGParams internally. 2006-07-03 22:56 edwards * tests/chroma/hadron/: bar3ptfn/bar3ptfn.out.xml, building_blocks/bb.out.xml, mesonspec/mesonspec.out.xml, seqsource/seqsource-baryon.out.xml, seqsource/seqsource-meson.out.xml, seqsource/seqsource-photon.out.xml, sink_smear/sink-deriv.out.xml, sink_smear/sink-displace.out.xml, sink_smear/sink_smearing.out.xml, stoch_meson/stoch_meson.out.xml: Updated/fixed regression output. 2006-07-03 22:55 edwards * lib/: io/qprop_io.cc, io/qprop_io.h, meas/inline/hadron/inline_bar3ptfn_w.cc, meas/inline/hadron/inline_building_blocks_w.cc, meas/inline/hadron/inline_hadspec_w.cc, meas/inline/hadron/inline_make_source_ferm_w.cc, meas/inline/hadron/inline_make_source_w.cc, meas/inline/hadron/inline_mesonspec_w.cc, meas/inline/hadron/inline_mres_w.cc, meas/inline/hadron/inline_mres_w.h, meas/inline/hadron/inline_multi_propagator_w.cc, meas/inline/hadron/inline_noisy_building_blocks_w.cc, meas/inline/hadron/inline_propagator_ferm_w.cc, meas/inline/hadron/inline_propagator_w.cc, meas/inline/hadron/inline_qqqNucNuc_w.cc, meas/inline/hadron/inline_seqsource_w.cc, meas/inline/hadron/inline_sink_smear_w.cc, meas/inline/hadron/inline_spectrumOct_w.cc, meas/inline/hadron/inline_spectrumQll.cc, meas/inline/hadron/inline_spectrum_w.cc, meas/inline/hadron/inline_stoch_baryon_w.cc, meas/inline/hadron/inline_stoch_meson_w.cc, meas/inline/schrfun/inline_sfpcac_w.cc, update/molecdyn/monomial/one_flavor_rat_monomial5d_params_w.cc, update/molecdyn/monomial/one_flavor_rat_monomial5d_params_w.h, update/molecdyn/monomial/one_flavor_rat_monomial_params_w.cc, update/molecdyn/monomial/one_flavor_rat_monomial_params_w.h, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.cc, update/molecdyn/monomial/prec_logdet_ee_monomial_w.cc, update/molecdyn/monomial/prec_logdet_ee_monomial_w.h, update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.cc, update/molecdyn/monomial/two_flavor_hasenbusch_monomial_params_w.cc, update/molecdyn/monomial/two_flavor_hasenbusch_monomial_params_w.h, update/molecdyn/monomial/two_flavor_monomial_params_w.cc, update/molecdyn/monomial/two_flavor_monomial_params_w.h, update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.cc, update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial5d_w.cc, update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.cc, update/molecdyn/monomial/unprec_two_flavor_monomial_w.cc: Converted usage of source/source_type, fermact, sink/sink_type to using GroupXML_t. Converted all monomials to use GroupXML_t as well. 2006-07-03 12:27 edwards * tests/: spectrum_s/spectrum_s_reg_test_output.xml, chroma/hadron_s/spectrum_s/spectrum_s.out.xml: New output format. 2006-07-03 12:25 edwards * tests/chroma/schrfun/schrfun.out.xml: New output format for InvertParam. 2006-07-03 11:26 edwards * lib/fermact.h, lib/invtype.h, lib/polyfermact.h, lib/syssolver.h, lib/actions/ferm/fermacts/asqtad_fermact_s.h, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/fermacts/overlap_fermact_base_w.cc, lib/actions/ferm/fermacts/overlap_fermact_base_w.h, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.h, lib/actions/ferm/fermacts/poly_cheb_fermact_w.cc, lib/actions/ferm/fermacts/poly_cheb_fermact_w.h, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_dwf_fermact_base_array_w.h, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.h, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/prec_wilson_fermact_w.h, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_base_array_w.h, lib/actions/ferm/fermacts/unprec_dwftransf_fermact_w.cc, lib/actions/ferm/fermacts/unprec_dwftransf_fermact_w.h, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.h, lib/actions/ferm/invert/invcg1.cc, lib/actions/ferm/invert/invcg1.h, lib/actions/ferm/invert/invcg2.cc, lib/actions/ferm/invert/invcg2.h, lib/actions/ferm/invert/invcg2_array.cc, lib/actions/ferm/invert/invcg2_array.h, lib/actions/ferm/invert/minvcg.cc, lib/actions/ferm/invert/minvcg_array.cc, lib/actions/ferm/invert/multi_syssolver_cg_params.cc, lib/actions/ferm/invert/multi_syssolver_cg_params.h, lib/actions/ferm/invert/multi_syssolver_mdagm.h, lib/actions/ferm/invert/multi_syssolver_mdagm_aggregate.cc, lib/actions/ferm/invert/multi_syssolver_mdagm_aggregate.h, lib/actions/ferm/invert/multi_syssolver_mdagm_cg.cc, lib/actions/ferm/invert/multi_syssolver_mdagm_cg.h, lib/actions/ferm/invert/multi_syssolver_mdagm_cg_array.cc, lib/actions/ferm/invert/multi_syssolver_mdagm_cg_array.h, lib/actions/ferm/invert/multi_syssolver_mdagm_factory.h, lib/actions/ferm/invert/syssolver_cg_params.cc, lib/actions/ferm/invert/syssolver_cg_params.h, lib/actions/ferm/invert/syssolver_linop.h, lib/actions/ferm/invert/syssolver_linop_aggregate.cc, lib/actions/ferm/invert/syssolver_linop_aggregate.h, lib/actions/ferm/invert/syssolver_linop_cg.cc, lib/actions/ferm/invert/syssolver_linop_cg.h, lib/actions/ferm/invert/syssolver_linop_cg_array.cc, lib/actions/ferm/invert/syssolver_linop_cg_array.h, lib/actions/ferm/invert/syssolver_linop_factory.h, lib/actions/ferm/invert/syssolver_mdagm.h, lib/actions/ferm/invert/syssolver_mdagm_aggregate.cc, lib/actions/ferm/invert/syssolver_mdagm_aggregate.h, lib/actions/ferm/invert/syssolver_mdagm_cg.cc, lib/actions/ferm/invert/syssolver_mdagm_cg.h, lib/actions/ferm/invert/syssolver_mdagm_cg_array.cc, lib/actions/ferm/invert/syssolver_mdagm_cg_array.h, lib/actions/ferm/invert/syssolver_mdagm_factory.h, lib/actions/ferm/invert/syssolver_polyprec.h, lib/actions/ferm/invert/syssolver_polyprec_aggregate.cc, lib/actions/ferm/invert/syssolver_polyprec_aggregate.h, lib/actions/ferm/invert/syssolver_polyprec_cg.cc, lib/actions/ferm/invert/syssolver_polyprec_cg.h, lib/actions/ferm/invert/syssolver_polyprec_factory.h, lib/actions/ferm/linop/unprec_dwf4d_linop_w.cc, lib/actions/ferm/linop/unprec_dwf4d_linop_w.h, lib/actions/ferm/linop/unprec_dwftransf_linop_w.cc, lib/actions/ferm/linop/unprec_dwftransf_linop_w.h, lib/actions/ferm/linop/unprec_pdwf4d_linop_w.cc, lib/actions/ferm/linop/unprec_pdwf4d_linop_w.h, lib/actions/ferm/linop/unprec_ppdwf4d_linop_w.cc, lib/actions/ferm/linop/unprec_ppdwf4d_linop_w.h, lib/actions/ferm/qprop/asqtad_cps_wrapper_qprop.cc, lib/actions/ferm/qprop/asqtad_cps_wrapper_qprop.h, lib/actions/ferm/qprop/asqtad_qprop.cc, lib/actions/ferm/qprop/dwf_fermact_qprop_array_w.cc, lib/actions/ferm/qprop/fermact_qprop.cc, lib/actions/ferm/qprop/fermact_qprop_array.cc, lib/actions/ferm/qprop/nef_quarkprop4_w.cc, lib/actions/ferm/qprop/nef_quarkprop4_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.h, lib/actions/ferm/qprop/prec_fermact_qprop.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.h, lib/actions/ferm/qprop/prec_staggered_qprop.h, lib/actions/ferm/qprop/quarkprop4_multi_w.cc, lib/actions/ferm/qprop/quarkprop4_s.cc, lib/actions/ferm/qprop/quarkprop4_s.h, lib/actions/ferm/qprop/quarkprop4_w.cc, lib/actions/ferm/qprop/staggered_qprop.cc, lib/io/param_io.cc, lib/io/param_io.h, lib/io/qprop_io.cc, lib/io/qprop_io.h, lib/io/xml_group_reader.cc, lib/io/xml_group_reader.h, lib/io/enum_io/enum_invtype_io.cc, lib/io/enum_io/enum_invtype_io.h, lib/io/enum_io/enum_io.h, lib/meas/inline/hadron/inline_multi_propagator_w.cc, lib/meas/inline/hadron_s/inline_spectrum_s.cc, lib/meas/inline/hadron_s/inline_spectrum_s.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_params_w.cc, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_params_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial_params_w.cc, lib/update/molecdyn/monomial/one_flavor_rat_monomial_params_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_params_w.cc, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_params_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/two_flavor_monomial_params_w.cc, lib/update/molecdyn/monomial/two_flavor_monomial_params_w.h, lib/update/molecdyn/monomial/two_flavor_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polyprec_monomial_w.h, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_monomial_w.h, mainprogs/tests/t_disc_loop_s.cc, mainprogs/tests/t_dwf4d.cc, mainprogs/tests/t_dwflocality.cc, mainprogs/tests/t_fermion_loop_w.cc, mainprogs/tests/t_prec_nef.cc, mainprogs/tests/t_precact_4d.cc, mainprogs/tests/t_precact_5d.cc, mainprogs/tests/t_precact_sse.cc, mainprogs/tests/t_propagator_fuzz_baryon_s.cc, mainprogs/tests/t_propagator_fuzz_s.cc, mainprogs/tests/t_propagator_nrqcd.cc, mainprogs/tests/t_propagator_s.cc, mainprogs/tests/t_propagator_twisted.cc, mainprogs/tests/t_propagator_w.cc: Changed FermionAction API to produce system solver classes. No longer have a fixed InvertParam set. Removed old inverter enum and support. Have default creation for inverters to solve M*psi=chi, MdagM*psi=chi, and multi-shift support. Some older files still have explicit calls to CG solver. 2006-07-03 11:22 edwards * tests/chroma/hadron/: bar3ptfn/bar3ptfn.out.xml, building_blocks/bb.out.xml, make_source/dilute.out.xml, make_source/make_source.out.xml, make_source/source-deriv.out.xml, make_source/source-displace.out.xml, mesonspec/mesonspec.out.xml, mres/mres.out.xml, noisy_building_blocks/nbb.out.xml, propagator/prec_clover.out.xml, propagator/prec_dwf.out.xml, propagator/prec_ht_contfrac5d.out.xml, propagator/prec_ovext.out.xml, propagator/prec_ovlap_contfrac5d.out.xml, propagator/prec_parwilson.out.xml, propagator/prec_wilson-smearing.out.xml, propagator/prec_wilson-twisted.out.xml, propagator/prec_wilson.out.xml, propagator/prec_zolo_nef.out.xml, propagator/unprec-ovlap-zolo4d.out.xml, propagator/unprec-zolo-ev-multi.out.xml, propagator/unprec_clover.out.xml, propagator/unprec_dwftransf.out.xml, propagator/unprec_hamberwu.out.xml, propagator/unprec_ovext.out.xml, propagator/unprec_ovlap_contfrac5d.out.xml, propagator/unprec_zolo_nef.out.xml, seqsource/seqsource-baryon.out.xml, seqsource/seqsource-meson.out.xml, seqsource/seqsource-photon.out.xml, sink_smear/sink-deriv.out.xml, sink_smear/sink-displace.out.xml, sink_smear/sink_smearing.out.xml, spectrum/spectrum-v12.out.xml, spectrumOct/spectrumOct-v11.out.xml, stoch_baryon/stoch_baryon.out.xml, stoch_meson/stoch_meson.out.xml: Updated all tests for new InvertParam output 2006-07-03 11:21 edwards * configure: Induced changes 2006-07-03 11:17 edwards * lib/Makefile.am: Added new inverter supports. 2006-07-03 11:15 edwards * aclocal.m4: Induced changes 2006-07-03 11:15 edwards * configure.ac: Changed to 3.8.0 2006-07-03 11:12 tag chroma3-7-4 2006-07-03 11:12 edwards * aclocal.m4, configure: Induced changes 2006-07-03 11:11 edwards * configure.ac: Change to 3.7.4 2006-07-03 11:10 edwards * NEWS: Info on 3.7.4 2006-06-21 16:44 bjoo * aclocal.m4: Induced changes 2006-06-21 16:44 bjoo * lib/Makefile.am: Added Hasenbusch related files for 5d 2006-06-21 16:42 bjoo * lib/update/molecdyn/monomial/: monomial_aggregate_w.cc, prec_constdet_two_flavor_hasenbusch_monomial5d_w.cc, prec_constdet_two_flavor_hasenbusch_monomial5d_w.h, two_flavor_hasenbusch_monomial5d_w.h, unprec_two_flavor_hasenbusch_monomial5d_w.cc, unprec_two_flavor_hasenbusch_monomial5d_w.h: dded 5D hasenbusch term. This is EXPERIMENTAL and UNTESTED but at least it builds. 2006-06-21 14:37 bjoo * lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial5d_w.h: Initial header file for two flavor 5D hasenbusch 2006-06-17 14:31 tag chroma3-7-3 2006-06-17 14:31 edwards * lib/meas/inline/smear/: inline_ape_smear.cc, inline_ape_smear.h: Fixed BlkAccu again from int to Real. 2006-06-17 14:30 edwards * tests/chroma/smear/ape_smear/: ape_smear.ini.xml, ape_smear.out.xml, ape_smear_v2.ini.xml, ape_smear_v2.out.xml: Replaced old input with new input. 2006-06-17 14:25 edwards * lib/meas/: inline/smear/inline_hyp_smear.h, smear/ape_link_smearing.cc, smear/ape_link_smearing.h, smear/hyp_link_smearing.cc, smear/hyp_link_smearing.h: Added BlkMax and BlkAccu to input params. 2006-06-17 14:24 edwards * tests/chroma/smear/link_smear/: link_smear.ini.xml, link_smear.out.xml: Updated tests. 2006-06-17 14:21 edwards * tests/chroma/smear/: hyp_smear/hyp_smear_v4.ini.xml, hyp_smear/hyp_smear_v4.out.xml, link_smear/link_smear.ini.xml, link_smear/link_smear.out.xml: Updated tests. 2006-06-17 13:50 edwards * aclocal.m4, configure: Induced changes 2006-06-17 13:49 edwards * configure.ac: Info on 3.7.3 2006-06-17 13:49 edwards * NEWS: Info on 3.7.3. 2006-06-17 13:47 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Bug fix. Didn't have the correct "_2" for the source/sink labels in the xml output. 2006-06-13 16:22 bjoo * lib/meas/inline/smear/inline_hyp_smear.cc: Replaced clock with StopWatch 2006-06-13 16:16 bjoo * lib/update/molecdyn/monomial/: two_flavor_polyprec_monomial_w.h, two_flavor_polynomial_monomial_w.h, two_flavor_monomial_w.h, two_flavor_monomial5d_w.h, two_flavor_hasenbusch_monomial_w.h, one_flavor_rat_monomial_w.h, one_flavor_rat_monomial5d_w.h: Added #include to catch bad cast exception 2006-06-13 16:15 bjoo * mainprogs/tests/t_lwldslash_sse.cc: Stripped clock added stop watch 2006-06-13 16:14 bjoo * mainprogs/tests/t_lwldslash_array.cc: Stripped clock and added StopWatch 2006-06-13 16:13 bjoo * other_libs/intel_sse_wilson_dslash/src/parscalar/shift_tables.c: Changed C plusplus comments to C comments 2006-06-13 14:19 bjoo * lib/meas/inline/io/default_gauge_field.cc: Added #include to enable bad_cast exceptions 2006-06-13 14:18 bjoo * lib/io/szin_io.cc: Reworked timing functions here 2006-06-13 14:16 bjoo * lib/io/milc_io.cc: Added time.h header file here - to make it compile on the XT3 2006-06-13 14:16 bjoo * lib/actions/ferm/linop/polynomial_op.h: Replaced int bits[maxBits] with multi1d bits(maxBits). Got rid of GNUism. Now compiles on Xt3 2006-06-11 23:39 tag chroma3-7-2 2006-06-11 23:39 edwards * aclocal.m4, configure: Induced changes 2006-06-11 23:38 edwards * configure.ac: Changed to 3.7.2 2006-06-11 23:38 edwards * NEWS: Info on 3.7.2 2006-06-11 23:37 edwards * lib/meas/inline/smear/inline_link_smear.h: Changed Params::write to Params::writeXML. 2006-06-11 23:37 edwards * lib/meas/inline/smear/inline_link_smear.cc: Bug fix. Need the correct name for the link_smear path object creation. 2006-06-11 23:36 edwards * tests/chroma/smear/link_smear/link_smear.out.xml: Updated. 2006-06-11 22:14 tag chroma3-7-1 2006-06-11 22:14 edwards * install_scripts/cygwin/config_chroma_parscalar-single.sh: Enabled runner. 2006-06-11 22:13 edwards * lib/meas/: hadron/group_baryon_operator_w.cc, hadron/group_baryon_operator_w.h, hadron/simple_baryon_operator_w.cc, hadron/simple_baryon_operator_w.h, inline/smear/inline_link_smear.cc, inline/smear/inline_link_smear.h, sinks/pt_sink_smearing.h, sinks/sh_sink_smearing.h, smear/link_smearing_factory.cc, smear/link_smearing_factory.h, smear/quark_source_sink.h, sources/pt_source_const.cc, sources/pt_source_smearing.h, sources/sh_source_const.cc, sources/sh_source_smearing.h: Removed all use of "linkSmear". Removed link_smearing_factory.cc . This bit of code is problematic with the current qdp++. 2006-06-11 22:10 edwards * configure: Induced changes 2006-06-11 22:08 edwards * lib/Makefile.am: Removed link_smearing_factory.cc 2006-06-11 22:03 edwards * aclocal.m4: Induced changes 2006-06-11 22:02 edwards * NEWS: Info on 3.7.1 2006-06-11 22:01 edwards * configure.ac: Changed to 3.7.1 2006-06-11 16:28 tag chroma3-7-0 2006-06-11 16:28 edwards * lib/actions/ferm/qprop/: prec_dwf_qprop_array_altivec_w.cc, prec_dwf_qprop_array_altivec_w.h, prec_dwf_qprop_array_sse_w.cc, prec_dwf_qprop_array_sse_w.h: Commented out first constructor, now save the EO/Prec linop that is passed and now computes the residual in the code. 2006-06-11 16:22 edwards * tests/chroma/hadron/propagator/: prec_dwf.ini.xml, prec_dwf.out.xml: Changed number of retries. 2006-06-11 15:42 edwards * NEWS: Info on 3.7.0 2006-06-11 15:39 edwards * tests/chroma/hadron/propagator/: prec_dwf.ini.xml, prec_dwf.out.xml: Turned on numRetries=3 2006-06-11 15:11 edwards * lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.cc: Compilation fix. 2006-06-11 14:45 edwards * lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.cc: Another small compilation fix. 2006-06-11 11:23 edwards * lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.h: Compilation fix (use "A" instead of "A_" for argument). 2006-06-11 02:31 edwards * aclocal.m4, configure: Induced changes 2006-06-11 02:30 edwards * configure, configure.ac, lib/fermact.h, lib/syssolver.h, lib/actions/ferm/fermacts/overlap_fermact_base_w.cc, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.h, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.h, lib/actions/ferm/qprop/asqtad_cps_wrapper_qprop.cc, lib/actions/ferm/qprop/asqtad_cps_wrapper_qprop.h, lib/actions/ferm/qprop/dwf_fermact_qprop_array_w.cc, lib/actions/ferm/qprop/dwf_quarkprop4_w.cc, lib/actions/ferm/qprop/dwf_quarkprop4_w.h, lib/actions/ferm/qprop/fermact_qprop.cc, lib/actions/ferm/qprop/fermact_qprop_array.cc, lib/actions/ferm/qprop/nef_quarkprop4_w.cc, lib/actions/ferm/qprop/nef_quarkprop4_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.h, lib/actions/ferm/qprop/prec_fermact_qprop.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.h, lib/actions/ferm/qprop/prec_staggered_qprop.h, lib/actions/ferm/qprop/quarkprop4_multi_w.cc, lib/actions/ferm/qprop/quarkprop4_s.cc, lib/actions/ferm/qprop/quarkprop4_s.h, lib/actions/ferm/qprop/quarkprop4_w.cc, lib/actions/ferm/qprop/quarkprop4_w.h, lib/io/qprop_io.cc, lib/io/qprop_io.h, lib/meas/hadron/ks_local_loops.cc, lib/meas/inline/hadron/inline_propagator_ferm_w.cc, lib/meas/inline/hadron/inline_propagator_w.cc, lib/meas/inline/hadron_s/util_compute_quark_prop_s.cc, lib/meas/inline/hadron_s/util_compute_singlet_ps.cc, lib/meas/schrfun/sfpcac_w.cc, mainprogs/main/cfgtransf.cc, mainprogs/tests/t_disc_loop_s.cc, mainprogs/tests/t_dwflocality.cc, mainprogs/tests/t_fermion_loop_w.cc, mainprogs/tests/t_precact_4d.cc, mainprogs/tests/t_precact_5d.cc, mainprogs/tests/t_propagator_fuzz_baryon_s.cc, mainprogs/tests/t_propagator_fuzz_s.cc, mainprogs/tests/t_propagator_s.cc, mainprogs/tests/t_propagator_twisted.cc, mainprogs/tests/t_propagator_w.cc, tests/regres.pl, tests/chroma/eig/eigbnds-v1.out.xml, tests/chroma/eig/ritz_Hw-v1.out.xml, tests/chroma/gfix/coulgauge/coulgauge.out.xml, tests/chroma/glue/fuzwilp/fuzwilp.out.xml, tests/chroma/glue/wilslp/wilslp.out.xml, tests/chroma/hadron/bar3ptfn/bar3ptfn.ini.xml, tests/chroma/hadron/bar3ptfn/bar3ptfn.out.xml, tests/chroma/hadron/building_blocks/bb.ini.xml, tests/chroma/hadron/building_blocks/bb.out.xml, tests/chroma/hadron/make_source/dilute.out.xml, tests/chroma/hadron/make_source/make_source.out.xml, tests/chroma/hadron/make_source/source-deriv.out.xml, tests/chroma/hadron/make_source/source-displace.out.xml, tests/chroma/hadron/mesonspec/mesonspec.ini.xml, tests/chroma/hadron/mesonspec/mesonspec.out.xml, tests/chroma/hadron/mres/mres.ini.xml, tests/chroma/hadron/mres/mres.out.xml, tests/chroma/hadron/noisy_building_blocks/nbb.dat_0.xml, tests/chroma/hadron/noisy_building_blocks/nbb.dat_1.xml, tests/chroma/hadron/noisy_building_blocks/nbb.ini.xml, tests/chroma/hadron/noisy_building_blocks/nbb.metric.xml, tests/chroma/hadron/noisy_building_blocks/nbb.out.xml, tests/chroma/hadron/noisy_building_blocks/regres.pl, tests/chroma/hadron/propagator/prec_clover.ini.xml, tests/chroma/hadron/propagator/prec_clover.out.xml, tests/chroma/hadron/propagator/prec_dwf.ini.xml, tests/chroma/hadron/propagator/prec_dwf.out.xml, tests/chroma/hadron/propagator/prec_ht_contfrac5d.ini.xml, tests/chroma/hadron/propagator/prec_ht_contfrac5d.out.xml, tests/chroma/hadron/propagator/prec_ovext.ini.xml, tests/chroma/hadron/propagator/prec_ovext.out.xml, tests/chroma/hadron/propagator/prec_ovlap_contfrac5d.ini.xml, tests/chroma/hadron/propagator/prec_ovlap_contfrac5d.out.xml, tests/chroma/hadron/propagator/prec_parwilson.ini.xml, tests/chroma/hadron/propagator/prec_parwilson.out.xml, tests/chroma/hadron/propagator/prec_wilson-smearing.ini.xml, tests/chroma/hadron/propagator/prec_wilson-smearing.out.xml, tests/chroma/hadron/propagator/prec_wilson-twisted.ini.xml, tests/chroma/hadron/propagator/prec_wilson-twisted.out.xml, tests/chroma/hadron/propagator/prec_wilson.ferm.ini.xml, tests/chroma/hadron/propagator/prec_wilson.ini.xml, tests/chroma/hadron/propagator/prec_wilson.out.xml, tests/chroma/hadron/propagator/prec_zolo_nef.ini.xml, tests/chroma/hadron/propagator/prec_zolo_nef.out.xml, tests/chroma/hadron/propagator/unprec-ovlap-zolo4d.ini.xml, tests/chroma/hadron/propagator/unprec-ovlap-zolo4d.out.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi.ini.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi.out.xml, tests/chroma/hadron/propagator/unprec_clover.ini.xml, tests/chroma/hadron/propagator/unprec_clover.out.xml, tests/chroma/hadron/propagator/unprec_dwftransf.ini.xml, tests/chroma/hadron/propagator/unprec_dwftransf.out.xml, tests/chroma/hadron/propagator/unprec_hamberwu.ini.xml, tests/chroma/hadron/propagator/unprec_hamberwu.out.xml, tests/chroma/hadron/propagator/unprec_ovext.ini.xml, tests/chroma/hadron/propagator/unprec_ovext.out.xml, tests/chroma/hadron/propagator/unprec_ovlap_contfrac5d.ini.xml, tests/chroma/hadron/propagator/unprec_ovlap_contfrac5d.out.xml, tests/chroma/hadron/propagator/unprec_zolo_nef.ini.xml, tests/chroma/hadron/propagator/unprec_zolo_nef.out.xml, tests/chroma/hadron/qqbar/qqbar.ini.xml, tests/chroma/hadron/qqq/qqq.ini.xml, tests/chroma/hadron/qqqNucNuc/qqqNucNuc.ini.xml, tests/chroma/hadron/seqsource/seqsource-baryon.ini.xml, tests/chroma/hadron/seqsource/seqsource-baryon.out.xml, tests/chroma/hadron/seqsource/seqsource-derivmeson.ini.xml, tests/chroma/hadron/seqsource/seqsource-meson.ini.xml, tests/chroma/hadron/seqsource/seqsource-meson.out.xml, tests/chroma/hadron/seqsource/seqsource-photon.ini.xml, tests/chroma/hadron/seqsource/seqsource-photon.out.xml, tests/chroma/hadron/sink_smear/sink-deriv.ini.xml, tests/chroma/hadron/sink_smear/sink-deriv.out.xml, tests/chroma/hadron/sink_smear/sink-displace.ini.xml, tests/chroma/hadron/sink_smear/sink-displace.out.xml, tests/chroma/hadron/sink_smear/sink_smearing.ini.xml, tests/chroma/hadron/sink_smear/sink_smearing.out.xml, tests/chroma/hadron/spectrum/spectrum-v12.ini.xml, tests/chroma/hadron/spectrum/spectrum-v12.out.xml, tests/chroma/hadron/spectrumOct/spectrumOct-v11.ini.xml, tests/chroma/hadron/spectrumOct/spectrumOct-v11.out.xml, tests/chroma/hadron/spectrumQll/spectrumQll-v1.ini.xml, tests/chroma/hadron/spectrumQll/spectrumQll-v2.ini.xml, tests/chroma/hadron/spectrumQll/spectrumQll-v3.ini.xml, tests/chroma/hadron/stoch_baryon/create_chroma_xml_small_eo.csh, tests/chroma/hadron/stoch_baryon/stoch_baryon.ini.xml, tests/chroma/hadron/stoch_baryon/stoch_baryon.out.xml, tests/chroma/hadron/stoch_meson/create_chroma_xml_small_eo.csh, tests/chroma/hadron/stoch_meson/stoch_meson.ini.xml, tests/chroma/hadron/stoch_meson/stoch_meson.out.xml, tests/chroma/hadron_s/spectrum_s/spectrum_s.out.xml, tests/chroma/io/nersc_read_obj/nersc_read_obj.out.xml, tests/chroma/io/nersc_write_obj/nersc_write_obj.out.xml, tests/chroma/io/qio_read_obj/qio_read_obj.out.xml, tests/chroma/io/qio_write_obj/qio_write_obj.out.xml, tests/chroma/io/szin_read_obj/szin_read_obj.out.xml, tests/chroma/io/szin_write_obj/szin_write_obj.out.xml, tests/chroma/schrfun/schrfun.ini.xml, tests/chroma/schrfun/schrfun.out.xml, tests/chroma/smear/link_smear/link_smear.out.xml, tests/purgaug/purgaug.ini.xml, tests/purgaug/purgaug.out.xml, tests/purgaug/purgaug.sfnonpt.ini.xml, tests/purgaug/purgaug.sfnonpt.out.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.out.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.out.xml, tests/t_leapfrog/t_leapfrog.parwilson_pqp_integrator_mts.out.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_wilson.out.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.out.xml, tests/t_leapfrog/t_leapfrog.prec_contfrac.out.xml, tests/t_leapfrog/t_leapfrog.prec_dwf.out.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch_wilson.out.xml, tests/t_leapfrog/t_leapfrog.prec_parwilson.out.xml, tests/t_leapfrog/t_leapfrog.unprec_clover.out.xml, tests/t_leapfrog/t_leapfrog.unprec_dwf.out.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.out.xml, tests/t_leapfrog/t_leapfrog.unprec_wilson.out.xml: Change in interface. The quarkProp routines now all take a "numRetries" variable for the number of times to call the qprop routine. The propagator regression tests have all been up to version 10 to read this new variable. The SystemSolver routines now all return a SystemSolverResults_t struct instead of an int of "n_count" . A residual of the unpreconditioned system of equations for the qprop and qpropT is computed. 2006-06-11 00:21 edwards * scripts/regenerate.csh: added path 2006-06-11 00:08 edwards * scripts/regenerate.csh: Regenerate script 2006-06-11 00:05 edwards * tests/: regenerate.csh, chroma/regenerate.csh: Removed. 2006-06-11 00:02 edwards * scripts/regenerate.csh: Regeneration script 2006-06-11 00:02 edwards * tests/chroma/regenerate.csh: Generate chroma 2006-06-10 23:46 edwards * tests/regres.pl: Added more regressions. 2006-06-10 23:46 edwards * tests/regenerate.csh: Regenerator script. 2006-06-10 12:38 edwards * tests/chroma/glue/wilslp/: wilslp.metric.xml, wilslp.out.xml: Update to match new output format. 2006-06-10 12:37 edwards * tests/chroma/glue/wilslp/wilslp.ini.xml: Added t_dir 2006-06-10 12:30 edwards * lib/meas/: glue/wilslp.cc, inline/glue/inline_wilslp.cc, inline/glue/inline_wilslp.h: Changed output format of wilslp. 2006-06-10 12:29 edwards * lib/meas/inline/smear/: inline_ape_smear.cc, inline_ape_smear.h, inline_hyp_smear.cc, inline_hyp_smear.h: Put in BlkMax and BlkAccu now as params. 2006-06-10 12:28 edwards * lib/meas/: sources/pt_source_const.cc, sources/pt_source_const.h, sources/pt_source_smearing.cc, sources/pt_source_smearing.h, sources/sh_source_const.cc, sources/sh_source_const.h, sources/sh_source_smearing.cc, sources/sh_source_smearing.h, sinks/pt_sink_smearing.cc, sinks/pt_sink_smearing.h, sinks/sh_sink_smearing.cc, sinks/sh_sink_smearing.h: Put back in quark_smear_first/last flag. 2006-06-10 12:28 edwards * lib/meas/smear/: link_smearing_aggregate.cc, link_smearing_aggregate.h, quark_displacement_aggregate.cc, quark_displacement_aggregate.h, quark_smearing_aggregate.cc, quark_smearing_aggregate.h: Added null XML group function. 2006-06-10 12:26 edwards * lib/meas/hadron/hadseqsrc_w.h: Removed obsolete hadseqsrc_w.h 2006-06-10 12:23 edwards * tests/chroma/hadron/: make_source/make_source.ini.xml, make_source/make_source.out.xml, make_source/source-displace.ini.xml, make_source/source-displace.out.xml, sink_smear/sink-displace.ini.xml, sink_smear/sink-displace.out.xml, sink_smear/sink_smearing.out.xml: Put back in quark_smear_first/last flag. 2006-06-08 23:14 tag chroma3-6-2 2006-06-08 23:14 edwards * aclocal.m4, configure: Induced changes 2006-06-08 23:14 edwards * NEWS: Info on 3.6.2 2006-06-08 23:12 edwards * configure.ac: Changed to 3.6.2 2006-06-08 23:12 edwards * tests/chroma/hadron/mesonspec/mesonspec.out.xml: Updated. 2006-06-07 17:29 bjoo * scripts/regres_report_to_html.xsl: Added stylesheet to transform report XML 2006-06-07 16:51 bjoo * scripts/: check_regres_runner.pl, create_regres_runner.pl: Script to create a jobsworth of tests and another to check the results 2006-06-06 15:06 kostas * lib/actions/ferm/fermacts/poly_cheb_fermact_w.cc: called the constructor that make's the bit reversal ordered lpoly 2006-06-06 15:02 kostas * lib/actions/ferm/linop/polynomial_op.h: Added bit reversal ordering into the polynomial operator... 2006-06-04 18:24 edwards * tests/chroma/hadron/mres/mres.metric.xml: Bumped up relative error. 2006-06-03 17:10 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Changed to avoid making a copy of the quark propagator. 2006-06-03 11:24 edwards * tests/chroma/hadron/mres/mres.metric.xml: Increase tolerance to 2.0e-5 . The parscalar-single-gcc4 results seem to differ a smidgeon in the last reported digit causing the xcheck to fail. 2006-06-01 11:10 edwards * scripts/run_chroma_xmldiff.pl: Put a /dev/null in the script. This precludes anybody redirecting. 2006-05-30 18:09 bjoo * lib/actions/ferm/linop/clover_term_qdp_w.h: Fixed the extra qualification in get clover term. It wasnt the const but the fully qualified function name in the .h file 2006-05-30 17:09 bjoo * other_libs/intel_sse_wilson_dslash/src/: parscalar/32bit/dslash/sse_su3dslash_w.c, scalar/32bit/dslash/sse_su3dslash_w.c: Removed two align directives that interfered with strict checking done by GCC4.1.1 2006-05-30 16:05 edwards * lib/actions/ferm/linop/: clover_term_base_w.h, clover_term_qdp_w.cc, clover_term_qdp_w.h: Removed const qualifier on return in getCloverCoeff. 2006-05-30 15:56 edwards * lib/actions/ferm/linop/: unprec_hamberwu_linop_w.h, unprec_w12_linop_w.h: Small compilation bug fix. 2006-05-26 16:37 edwards * tests/chroma/io/qio_write_obj/: qio_write_obj.ini.xml, qio_write_obj.out.xml: Added double precision test. 2006-05-26 01:03 tag chroma3-6-1 2006-05-26 01:03 edwards * NEWS: Info on 3.6.1 2006-05-26 01:02 edwards * INSTALL.ibm: Obsolete. 2006-05-26 01:00 edwards * aclocal.m4, configure: Induced changes 2006-05-26 01:00 edwards * configure.ac: Changed to 3.6.1 2006-05-26 00:59 edwards * lib/meas/inline/hadron/: inline_mesonspec_w.cc, inline_mesonspec_w.h: Changed ordering of g5*adj(prop_2)*g5 and sink spin insertion. 2006-05-26 00:58 edwards * tests/chroma/hadron/mesonspec/mesonspec.out.xml: Updated again. 2006-05-26 00:52 edwards * tests/chroma/hadron/mesonspec/: mesonspec.ini.xml, mesonspec.out.xml: New version of input and output. 2006-05-25 22:00 tag intel_sse_dslash1-3-6 2006-05-25 22:00 edwards * other_libs/intel_sse_wilson_dslash/: aclocal.m4, configure: Induced changes. 2006-05-25 21:59 edwards * other_libs/intel_sse_wilson_dslash/NEWS: Info on 1.3.6 2006-05-25 21:56 edwards * other_libs/intel_sse_wilson_dslash/configure.ac: Small bug fix. In the 64bit SSE wilson dslash there was an call to QMP_wait that didn't check for "total_comm". So, this would fail on parscalar-single. 2006-05-25 17:07 edwards * other_libs/intel_sse_wilson_dslash/src/parscalar/64bit/dslash/sse_su3dslash_w.c: Bug fix. Added missing test of total_comm around a QMP_wait call. 2006-05-25 14:47 edwards * tests/chroma/hadron_s/spectrum_s/spectrum_s.out.xml: Updated. 2006-05-24 17:24 tag chroma3-6-0 2006-05-24 17:24 edwards * NEWS: Info on 3.6.0 2006-05-24 17:20 tag chroma3-5-1 2006-05-24 17:20 edwards * NEWS: Info on 3.5.1 2006-05-24 17:18 edwards * configure: Induced changes. 2006-05-24 17:14 edwards * aclocal.m4: Induced changes. 2006-05-24 17:13 edwards * configure.ac: Changed to 3.6.0 2006-05-24 17:10 edwards * lib/Makefile.am: Added xml_group_reader and new spin insertion routines. 2006-05-24 17:09 edwards * lib/meas/: hadron/no_spin_insertion.cc, hadron/no_spin_insertion.h, hadron/simple_spin_insertion_w.cc, hadron/simple_spin_insertion_w.h, hadron/spin_insertion.h, hadron/spin_insertion_aggregate.cc, hadron/spin_insertion_aggregate.h, hadron/spin_insertion_factory.h, inline/hadron/inline_mesonspec_w.cc, inline/hadron/inline_mesonspec_w.h: Overhauled mesonspect to (1) write complex output and (2) use new spin insertions. Now one passes in a list of pairs of quark props along with the source/sink spin insertions to perform and the operation on accumulating onto the target correlation function. 2006-05-24 17:08 edwards * lib/meas/smear/: deriv_quark_displacement_w.cc, deriv_quark_displacement_w.h: Added simple nabla, D and B derivatives. 2006-05-24 17:07 edwards * lib/io/: xml_group_reader.cc, xml_group_reader.h: Convenience function for snarfing a group and and a type tag. 2006-05-24 17:06 edwards * tests/chroma/hadron/mesonspec/mesonspec.metric.xml: Fixed up metric for complex output. 2006-05-24 15:21 edwards * tests/chroma/hadron/mesonspec/: mesonspec.ini.xml, mesonspec.out.xml: New format. 2006-05-24 12:26 egregory * tests/spectrum_s/spectrum_s_reg.xml: removed troublesome rhos from test 2006-05-24 12:25 egregory * tests/spectrum_s/spectrum_s_reg_test_output.xml: removed troublesome rhos frmo test 2006-05-24 02:31 kostas * lib/actions/ferm/invert/invcg2_array.cc: added reporting of true residual 2006-05-23 14:11 edwards * lib/io/enum_io/: enum_plusminus_io.cc, enum_plusminus_io.h: Added plusminus io. 2006-05-23 14:11 edwards * lib/Makefile.am: Added enum_plusminus_io.{h,cc} 2006-05-23 12:36 egregory * tests/spectrum_s/spectrum_s_reg_test_output.xml: updated test output 2006-05-23 12:35 egregory * lib/meas/hadron/pion_sing_s.cc: fixed bug in shift 2006-05-23 12:34 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: made bool do_stoch_conn_corr = false the default. ---------------------------------------------------------------------- 2006-05-23 12:01 edwards * tests/chroma/hadron/stoch_baryon/stoch_baryon.out.xml: Updated output. 2006-05-23 11:54 edwards * lib/meas/inline/hadron/inline_stoch_baryon_w.cc: Fix number of pops. 2006-05-23 11:46 edwards * tests/chroma/hadron/stoch_baryon/: create_chroma_xml_small_eo.csh, stoch_baryon.ini.xml, stoch_baryon.out.xml: New output format. 2006-05-23 00:39 edwards * lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.cc: Use single or double precision depending on how qdp is compiled. 2006-05-22 10:45 edwards * install_scripts/jlab/config_chroma_scalar.sh: Modified for new jlab use 2006-05-21 00:49 edwards * lib/meas/hadron/group_baryon_operator_w.cc: Improved reading of a complex from the coefficients file. 2006-05-21 00:40 edwards * lib/meas/: hadron/group_baryon_operator_w.cc, hadron/group_baryon_operator_w.h, hadron/simple_baryon_operator_w.cc, hadron/simple_baryon_operator_w.h, inline/hadron/inline_stoch_baryon_w.cc, inline/hadron/inline_stoch_baryon_w.h: New baryon_operator format. Reads smearing within operator tags. The inline version no longer handles any smearing. 2006-05-21 00:39 edwards * lib/Makefile.am: Added no link_smearing 2006-05-21 00:38 edwards * tests/chroma/hadron/stoch_baryon/: create_chroma_xml_small_eo.csh, stoch_baryon.ini.xml, stoch_baryon.out.xml: New baryon_operator format. 2006-05-20 00:23 edwards * lib/meas/sources/: sh_source_const.cc, sh_source_const.h, sh_source_smearing.cc, sh_source_smearing.h: Reverted to version 2 and removed quark_smear_first/last flag. 2006-05-20 00:23 edwards * lib/meas/sinks/: sh_sink_smearing.cc, sh_sink_smearing.h: Reverted to version 2 and removed quark_smear_last/first flag. 2006-05-20 00:22 edwards * tests/chroma/hadron/make_source/: make_source.ini.xml, make_source.out.xml, source-displace.ini.xml, source-displace.out.xml: Reverted source to version 2. 2006-05-20 00:22 edwards * tests/chroma/hadron/sink_smear/: sink-displace.ini.xml, sink-displace.out.xml: Reverted source & sink versions to 2. 2006-05-19 17:34 edwards * lib/meas/smear/: link_smearing_aggregate.cc, no_link_smearing.cc, no_link_smearing.h: Added no link smearing 2006-05-19 11:10 edwards * configure: Induced changes. 2006-05-19 11:05 edwards * lib/meas/smear/: no_quark_smearing.cc, no_quark_smearing.h, quark_smearing_aggregate.cc: Added NoQuarkSmearing 2006-05-19 11:02 edwards * aclocal.m4: Induced changes. 2006-05-19 10:57 edwards * configure.ac: Bumped to 3.5.1 2006-05-19 10:56 edwards * lib/Makefile.am: Added missing include files. 2006-05-18 22:22 edwards * install_scripts/cygwin/config_chroma_scalar.sh: Updated for test runner. 2006-05-18 21:17 tag chroma3-5-0 2006-05-18 21:17 edwards * aclocal.m4, configure: Induced changes. 2006-05-18 21:16 edwards * NEWS: Info on 3.5.0 2006-05-18 21:14 edwards * configure.ac: Changed to 3.5.0 2006-05-18 17:15 tag intel_sse_dslash1-3-5 2006-05-18 17:15 edwards * other_libs/intel_sse_wilson_dslash/src/parscalar/: 32bit/dslash/sse_su3dslash_w.c, 64bit/dslash/sse_su3dslash_w.c: Even more loosening of restrictions on valid subgrid sizes. The code only expects that there be at least 2 subgrid sites after checkerboarding. There apparently is another restriction that the original problem size can't be 1 in any direction. 2006-05-18 17:10 edwards * other_libs/intel_sse_wilson_dslash/: aclocal.m4, configure: Induced changes. 2006-05-18 17:10 edwards * other_libs/intel_sse_wilson_dslash/NEWS: Info on 1.3.5 2006-05-18 17:08 edwards * other_libs/intel_sse_wilson_dslash/configure.ac: Changed to 1.3.5 2006-05-18 14:32 kostas * lib/meas/inline/hadron/inline_hadron_aggregate.cc, lib/meas/inline/hadron/inline_spectrumQll.cc, tests/chroma/hadron/spectrumQll/spectrumQll-v1.ini.xml, tests/chroma/hadron/spectrumQll/spectrumQll-v2.ini.xml, tests/chroma/hadron/spectrumQll/spectrumQll-v3.ini.xml, tests/chroma/hadron/spectrumQll/spectrumQll.dat.xml, tests/chroma/hadron/spectrumQll/spectrumQll.out.xml: fixed up Qll and added sample input and output 2006-05-18 14:28 tag intel_sse_dslash1-3-4 2006-05-18 14:28 edwards * other_libs/intel_sse_wilson_dslash/: aclocal.m4, configure: Induced changes. 2006-05-18 14:27 edwards * other_libs/intel_sse_wilson_dslash/: configure.ac, NEWS: Changed to 1.3.4 2006-05-18 14:23 edwards * other_libs/intel_sse_wilson_dslash/: aclocal.m4, configure: Induced changes. 2006-05-18 14:22 edwards * other_libs/intel_sse_wilson_dslash/NEWS: Info on 1.3.2 2006-05-18 14:21 edwards * other_libs/intel_sse_wilson_dslash/configure.ac: Changed to 1.3.2 2006-05-18 14:21 edwards * other_libs/intel_sse_wilson_dslash/src/parscalar/: 32bit/dslash/sse_su3dslash_w.c, 64bit/dslash/sse_su3dslash_w.c: Loosened restrictions on problem size. 2006-05-18 14:03 kostas * aclocal.m4, lib/Makefile.am, lib/meas/hadron/barQll_w.cc, lib/meas/hadron/barQll_w.h, lib/meas/hadron/hadron_w.h, lib/meas/hadron/mesQl_w.cc, lib/meas/hadron/mesQl_w.h, lib/meas/inline/hadron/inline_hadron_aggregate.cc, lib/meas/inline/hadron/inline_spectrumQll.cc: fixed up Qll 2006-05-17 16:19 edwards * tests/chroma/hadron/stoch_baryon/regres.pl: Fixed to call baryon test. 2006-05-17 16:18 edwards * tests/chroma/hadron/seqsource/: regres.pl, seqsource-photon.ini.xml, seqsource-photon.metric.xml, seqsource-photon.out.xml: Added photon. 2006-05-17 15:24 tag chroma3-4-3 2006-05-17 15:24 bjoo * configure.ac, configure: Added --ranlib --ar features to config script 2006-05-17 15:15 bjoo * chroma-config.in: Added --ranlib --ar features to config script 2006-05-17 11:04 bjoo * NEWS: Amended News for Amened MPIRUN RSH runner 2006-05-17 10:56 bjoo * scripts/test_runners/mpirun_rsh_runner.sh.in: Hardwired two nodes here 2006-05-17 10:42 bjoo * aclocal.m4, NEWS, configure.ac: Induced Changes 2006-05-17 10:42 bjoo * configure: v 3.4.2 Configure 2006-05-17 10:35 bjoo * scripts/test_runners/trivial_runner.sh.in: Typo in shell invocation 2006-05-17 10:28 bjoo * scripts/test_runners/: mpirun_rsh_runner.sh.in, trivial_runner.sh.in: Testcase Runners for mvapich_rsh and trivial 2006-05-16 10:42 edwards * docs/notes/: three_point.eps, pion_three_point.eps: Added missing file. 2006-05-15 15:54 edwards * lib/meas/hadron/: photon_seqsrc_w.cc, photon_seqsrc_w.h: Added POINT_SPLIT_PHOTON. 2006-05-15 14:44 edwards * tests/chroma/hadron/seqsource/seqsource-photon.out.xml: Canonical version. 2006-05-14 23:20 edwards * lib/meas/hadron/: group_baryon_operator_w.cc, group_baryon_operator_w.h: Separating off some routines for further generalization. 2006-05-14 15:41 edwards * tests/chroma/hadron/stoch_baryon/stoch_baryon.out.xml: More updates. 2006-05-14 15:39 edwards * lib/meas/inline/hadron/inline_stoch_baryon_w.cc: Removed more debugging. 2006-05-14 15:38 edwards * lib/meas/inline/hadron/inline_stoch_baryon_w.cc: Fixed timing. 2006-05-14 15:34 edwards * lib/meas/inline/hadron/inline_stoch_baryon_w.cc: Turned on all 6 permutations. Removed debugging. 2006-05-14 15:28 edwards * tests/chroma/hadron/stoch_baryon/: stoch_baryon.ini.xml, stoch_baryon.out.xml: Updated. 2006-05-14 15:27 edwards * tests/chroma/hadron/stoch_baryon/create_chroma_xml_small_eo.csh: Changed input. 2006-05-14 15:26 edwards * lib/meas/inline/hadron/inline_stoch_baryon_w.cc: New debugging. Removed copies of sources and solns. 2006-05-14 15:24 edwards * tests/chroma/hadron/stoch_baryon/create_chroma_xml_small_eo.csh: New input. 2006-05-14 15:17 edwards * lib/meas/hadron/group_baryon_operator_w.h: Now have a disp_dir and disp_len in coeff struct. 2006-05-14 15:17 edwards * lib/meas/hadron/group_baryon_operator_w.cc: Bug fixes. Need to rotate to Dirac basis. Also, had a nasty indexing error on spin -= 1. Not sure array ops are such a nice thing. 2006-05-11 23:42 edwards * tests/chroma/hadron/stoch_baryon/: create_chroma_xml_small_eo.csh, stoch_baryon.ini.xml, stoch_baryon.out.xml: Switched to new BaryonOperator input in STOCH_BARYON. 2006-05-11 23:38 edwards * lib/meas/: hadron/baryon_operator.cc, hadron/baryon_operator.h, hadron/baryon_operator_aggregate_w.cc, hadron/baryon_operator_aggregate_w.h, hadron/baryon_operator_factory_w.h, hadron/group_baryon_operator_w.cc, hadron/group_baryon_operator_w.h, hadron/simple_baryon_operator_w.cc, hadron/simple_baryon_operator_w.h, inline/hadron/inline_stoch_baryon_w.cc, inline/hadron/inline_stoch_baryon_w.h: New baryon operator support. The stoch_baryon task now calls this thing. Not ready yet - smearing not properly handled. 2006-05-11 23:36 edwards * lib/Makefile.am: New baryon operator support. 2006-05-11 18:55 tag chroma3-4-1 2006-05-11 18:55 edwards * aclocal.m4, configure: Induced changes. 2006-05-11 18:54 edwards * NEWS: Info on 3.4.1. 2006-05-11 18:53 edwards * configure.ac: Changed to 3.4.1 2006-05-10 17:59 edwards * lib/meas/inline/hadron/inline_stoch_baryon_w.cc: Added a functional baryon_contract routine. 2006-05-10 00:52 tag chroma3-4-0 2006-05-10 00:52 edwards * NEWS: Info on 3.4.0 2006-05-10 00:49 edwards * tests/chroma/hadron/propagator/: prec_dwf.ini.xml, prec_dwf.out.xml: Turned on obsvP 2006-05-10 00:48 edwards * lib/actions/ferm/fermacts/: prec_dwf_fermact_array_w.cc, prec_dwf_fermact_array_w.h, prec_kno_fermact_array_w.cc, prec_kno_fermact_array_w.h, prec_nef_fermact_array_w.cc, prec_nef_fermact_array_w.h, prec_zolo_nef_fermact_array_w.cc, prec_zolo_nef_fermact_array_w.h, unprec_dwf_fermact_array_w.cc, unprec_dwf_fermact_array_w.h, unprec_nef_fermact_array_w.cc, unprec_nef_fermact_array_w.h, unprec_zolo_nef_fermact_array_w.cc, unprec_zolo_nef_fermact_array_w.h: Fixed quarkProp calls to have the bleeping "const" qualifier at the end. Otherwise, this is considered a "new" func and my overrides are not used. 2006-05-10 00:02 kostas * lib/meas/hadron/: mesQl_w.cc, mesQl_w.h: added Ql spectrum 2006-05-09 23:59 kostas * lib/meas/hadron/: barQll_w.cc, barQll_w.h: added baryon Qll 2006-05-09 23:58 kostas * lib/meas/inline/hadron/: inline_spectrumQll.cc, inline_spectrumQll.h: added inline_spectrumQll 2006-05-09 17:47 edwards * lib/meas/inline/hadron/inline_stoch_baryon_w.cc: Fixed writing orderings_size,. 2006-05-09 16:59 edwards * tests/chroma/hadron/stoch_baryon/stoch_baryon.out.xml: Removed evenodd 2006-05-09 16:34 edwards * aclocal.m4, configure: Induced changes. 2006-05-09 16:33 edwards * configure.ac: Changed to version 3.4.0 2006-05-09 16:33 edwards * mainprogs/main/: Makefile.am, stoch_meson.cc: Removed stoch_meson main program. 2006-05-09 16:32 edwards * lib/Makefile.am: Added inline stoch_meson and inline stoch_baryon 2006-05-09 16:32 edwards * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_stoch_baryon_w.cc, inline_stoch_baryon_w.h, inline_stoch_meson_w.cc, inline_stoch_meson_w.h: New stoch_meson and stoch_baryon measurements. 2006-05-09 16:31 edwards * tests/: regres.pl, stoch_meson/create_chroma_xml.csh, stoch_meson/create_chroma_xml_eo.csh, stoch_meson/stoch_meson.eo.ini.xml, stoch_meson/stoch_meson.ini.xml, stoch_meson/stoch_meson.out.xml: New chroma regression tests. Removed old stoch_meson main program tests. 2006-05-09 16:29 edwards * tests/chroma/hadron/stoch_baryon/: create_chroma_xml_small_eo.csh, regres.pl, stoch_baryon.ini.xml, stoch_baryon.metric.xml, stoch_baryon.out.xml: New regression tests. 2006-05-09 13:47 edwards * tests/regres.pl: Added regression test of stoch_meson in chroma. 2006-05-09 13:47 edwards * tests/chroma/hadron/stoch_meson/: create_chroma_xml_small_eo.csh, regres.pl, stoch_meson.ini.xml, stoch_meson.metric.xml, stoch_meson.out.xml: New regression tests. 2006-05-09 11:09 tag chroma3-3-0 2006-05-09 11:09 edwards * NEWS: Info on 3.3.0 2006-05-09 11:08 edwards * configure: Induced changes. 2006-05-09 10:19 edwards * tests/chroma/hadron/sink_smear/: sink-displace.ini.xml, sink-displace.out.xml: Changed input version. 2006-05-05 23:09 edwards * lib/meas/: sinks/sh_sink_smearing.cc, sources/sh_source_const.cc, sources/sh_source_smearing.cc: Made ordering required. Fixed writers to be v3. 2006-05-05 11:58 edwards * tests/chroma/hadron/sink_smear/: sink-displace.ini.xml, sink-displace.out.xml: Updated source and sink smearing for new params. 2006-05-05 01:23 edwards * tests/chroma/hadron/make_source/: make_source.ini.xml, make_source.out.xml, source-displace.ini.xml, source-displace.out.xml: Added quark_smear_lastP flag. 2006-05-05 01:22 edwards * lib/meas/sources/: sh_source_const.cc, sh_source_smearing.cc, sh_source_smearing.h: Rearranged where quark_smear_lastP is read. Now is optional. 2006-05-05 00:19 edwards * lib/meas/: sinks/sh_sink_smearing.cc, sinks/sh_sink_smearing.h, sources/sh_source_const.cc, sources/sh_source_const.h: Added a quark_smear_order flag to determine the order of smearing versus displacement. 2006-05-04 23:10 edwards * configure.ac: Changed to 3.3.0 2006-05-04 23:08 edwards * tests/chroma/hadron/bar3ptfn/: bar3ptfn.ini.xml, bar3ptfn.out.xml: New input and output format. 2006-05-04 23:07 edwards * lib/meas/: hadron/formfac_w.cc, hadron/formfac_w.h, inline/hadron/inline_bar3ptfn_w.cc, inline/hadron/inline_bar3ptfn_w.h: Added an extra gamma_insertion similar to building_blocks. 2006-05-02 10:13 edwards * README: Updated. 2006-05-01 16:19 kostas * lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.cc: fixed an other typo due to porting in chroma 3.0 2006-05-01 12:06 kostas * lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.cc: added timing and status checking in the altivec inverter 2006-05-01 11:27 kostas * lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.h: fixed altivec bugs introduced in vs 3.0 2006-04-26 23:08 tag chroma3-2-1 2006-04-26 23:08 edwards * NEWS: Info on 3.2.1 2006-04-26 22:36 edwards * mainprogs/main/stoch_meson.cc: Added some comments. 2006-04-26 22:35 edwards * lib/meas/inline/io/: inline_io_aggregate.cc, inline_nersc_read_obj.cc, inline_nersc_read_obj.h, inline_snarf_obj.cc, inline_snarf_obj.h, io.h: Removed snarf - it's been superceded. Added nersc reader. 2006-04-26 22:34 edwards * lib/Makefile.am: Added nersc reader task. 2006-04-26 22:31 edwards * aclocal.m4, configure: Induced changes. 2006-04-26 22:29 edwards * tests/regres.pl: Added more regression tests. 2006-04-26 22:28 edwards * configure.ac: Changed to 3.2.1 2006-04-26 22:28 edwards * tests/chroma/io/nersc_read_obj/: nersc_read_obj.ini.xml, nersc_read_obj.metric.xml, nersc_read_obj.out.xml, regres.pl: More regression tests. 2006-04-26 21:53 edwards * tests/chroma/io/: nersc_write_obj/nersc_write_obj.metric.xml, nersc_write_obj/regres.pl, qio_write_obj/qio_write_obj.metric.xml, qio_write_obj/regres.pl, szin_write_obj/regres.pl, szin_write_obj/szin_write_obj.metric.xml: New regression tests 2006-04-26 16:55 edwards * tests/chroma/io/: nersc_write_obj/nersc_write_obj.ini.xml, nersc_write_obj/nersc_write_obj.out.xml, qio_read_obj/qio_read_obj.out.xml, qio_write_obj/qio_write_obj.ini.xml, qio_write_obj/qio_write_obj.out.xml, szin_read_obj/szin_read_obj.ini.xml, szin_read_obj/szin_read_obj.out.xml, szin_write_obj/szin_write_obj.ini.xml, szin_write_obj/szin_write_obj.out.xml: Removed SNARF 2006-04-26 16:48 edwards * tests/chroma/io/qio_read_obj/: qio_read_obj.ini.xml, qio_read_obj.out.xml: Bypass snarf. 2006-04-25 23:45 edwards * tests/chroma/schrfun/schrfun.out.xml: New version. Yuk, it costs twice as much, but I need the generality of arbitrary direction support. 2006-04-25 23:42 edwards * lib/meas/sources/walfil_w.cc: Amounts to only indenting the code. 2006-04-25 23:41 edwards * lib/meas/schrfun/sfpcac_w.cc: Removed j_decay limitation. Code now solves for *all* spin components thus twice the needed work. However, it now uses a general spin projector thus allowing it to *easily* work for arbitrary directions. That's life. 2006-04-25 23:36 edwards * lib/meas/schrfun/sfpcac_w.cc: More cleanups. Still same cost. Checked the code works by comparing old to new output. 2006-04-25 22:55 edwards * lib/meas/schrfun/sfpcac_w.cc: Changed some of the really confusing usages of quark_prop_f and quark_prop_b to be now the same as the current quark_propagator. 2006-04-25 22:06 edwards * lib/meas/schrfun/sfpcac_w.cc: Some small cleanups. 2006-04-25 16:28 edwards * mainprogs/main/Makefile.am: Moved stoch_meson to bin programs 2006-04-25 16:27 edwards * tests/stoch_meson/create_chroma_xml.csh: Added missing gauge_id 2006-04-25 16:26 edwards * aclocal.m4, configure: Induced changes. 2006-04-25 16:26 edwards * tests/stoch_meson/stoch_meson.ini.xml: Updated. 2006-04-25 16:24 edwards * lib/meas/sources/: pt_source_const.cc, pt_source_smearing.cc, pt_source_smearing.h, sh_source_const.cc, sh_source_smearing.cc, sh_source_smearing.h: Updated smearing routines to be version 2. Made the writers also write version 2. 2006-04-22 17:35 edwards * mainprogs/main/purgaug.cc: Rearranged output file names. 2006-04-22 16:52 edwards * lib/meas/inline/glue/inline_polylp.cc: Removed debugging output. 2006-04-18 23:35 tag chroma3-2-0 2006-04-18 23:35 edwards * lib/meas/inline/io/default_gauge_field.cc: Removed debugging output. 2006-04-18 23:34 edwards * lib/meas/inline/glue/inline_plaquette.cc: Removed debugging comment. 2006-04-18 23:32 edwards * mainprogs/main/purgaug.cc: Toughened error handling on input xml. 2006-04-18 23:00 edwards * tests/regres.pl: More regression tests. 2006-04-18 22:59 edwards * tests/chroma/schrfun/: regres.pl, schrfun.metric.xml, schrfun.out.xml: New regression tests. 2006-04-18 22:37 edwards * aclocal.m4, configure: Induced changes. 2006-04-18 22:36 edwards * tests/purgaug/: purgaug.sfnonpt.ini.xml, purgaug.sfnonpt.metric.xml, purgaug.sfnonpt.out.xml: New tests. 2006-04-18 22:36 edwards * tests/purgaug/regres.pl: More tests 2006-04-18 22:31 edwards * tests/purgaug/: purgaug.ini.xml, purgaug.out.xml: Switched to using gauge action. 2006-04-18 22:30 edwards * mainprogs/main/purgaug.cc: Switch to using a proper gauge action factory method. Still is forced to be the WilsonGaugeAct. However, now a gaugeact is actually used - wasn't before. 2006-04-18 22:29 edwards * lib/actions/gauge/gaugeacts/: lw_tree_gaugeact.cc, lw_tree_gaugeact.h, plaq_gaugeact.cc, plaq_gaugeact.h, rect_gaugeact.h, wilson_gaugeact.cc: Changed to using a param struct. Now the plaq_gaugact properly supports anisotropy, but the LW does **NOT** properly support aniso. 2006-04-18 22:28 edwards * lib/update/molecdyn/monomial/gauge_monomial.cc: Minutae. 2006-04-18 22:28 edwards * lib/update/heatbath/: heatbath.h, su3_hb_sweep.cc, su3_hb_sweep.h, u_staple.cc, u_staple.h: Removed su3_hb_sweep and u_staple 2006-04-18 22:28 edwards * lib/update/heatbath/: mciter.cc, mciter.h: Switched to using WilsonGaugeAct. 2006-04-18 22:27 edwards * lib/Makefile.am: Removed u_staple.{h,cc} and su3_hb_sweep.{h,cc}. The functionality of u_staple has been moved to plaq_gaugact.cc 2006-04-18 22:26 edwards * lib/io/aniso_io.cc: Changed to if the read anisoP is false, it resets the struct to its default state (constructor). 2006-04-18 22:24 edwards * tests/t_leapfrog/: regres.pl, t_leapfrog.lw.sfnonpt.ini.xml, t_leapfrog.lw.sfnonpt.metric.xml, t_leapfrog.lw.sfnonpt.out.xml, t_leapfrog.prec_1flav_dwf.ini.xml, t_leapfrog.prec_1flav_dwf.out.xml, t_leapfrog.prec_2flav_clover.sfnonpt.ini.xml, t_leapfrog.prec_2flav_clover.sfnonpt.out.xml, t_leapfrog.prec_wilson.ini.xml, t_leapfrog.prec_wilson.out.xml: Updated regression tests. 2006-04-18 13:22 edwards * NEWS: Infon on 3.2.0 2006-04-18 13:20 edwards * configure.ac: Changed to 3.2.0 2006-04-17 10:17 bjoo * install_scripts/QCDOC/ED_qcdocfe/: README, make_all.sh, make_functions.sh: Recent QCDOC build scripts 2006-04-15 23:38 edwards * README: Small change. 2006-04-15 23:34 edwards * tests/: multi_propagator/multi_propagator_zolo4_v5.linux-scalar-intel.xml, multi_propagator/multi_propagator_zolo4_v5.xml.ini, multi_propagator_comp/collect_multi_propcomp_szinev.linux-scalar-intel.xml, multi_propagator_comp/collect_propcomp.linux-scalar-intel.xml, multi_propagator_comp/multi_propagator_comp_zolo4_c0.linux-scalar-intel.xml, multi_propagator_comp/multi_propagator_comp_zolo4_c0.xml.ini, multi_propagator_comp/multi_propagator_comp_zolo4_c1.linux-scalar-intel.xml, multi_propagator_comp/multi_propagator_comp_zolo4_c1.xml.ini, multi_propagator_comp/multi_propagator_comp_zolo4_c2.linux-scalar-intel.xml, multi_propagator_comp/multi_propagator_comp_zolo4_c2.xml.ini, multi_propagator_comp/multi_propagator_comp_zolo4_szinev_c0.linux-scalar-intel.xml, multi_propagator_comp/multi_propagator_comp_zolo4_szinev_c0.xml.ini, multi_propagator_comp/multi_propagator_comp_zolo4_szinev_c1.linux-scalar-intel.xml, multi_propagator_comp/multi_propagator_comp_zolo4_szinev_c1.xml.ini, multi_propagator_comp/multi_propagator_comp_zolo4_szinev_c2.linux-scalar-intel.xml, multi_propagator_comp/multi_propagator_comp_zolo4_szinev_c2.xml.ini, multi_propagator_comp/run.sh, multi_propagator_comp/run_szinev.sh, propagator_comp/propagator_comp_zolo4_c0.linux-scalar-intel.xml, propagator_comp/propagator_comp_zolo4_c0.xml.ini, propagator_comp/propagator_comp_zolo4_c1.linux-scalar-intel.xml, propagator_comp/propagator_comp_zolo4_c1.xml.ini, propagator_comp/propagator_comp_zolo4_c2.linux-scalar-intel.xml, propagator_comp/propagator_comp_zolo4_c2.xml.ini, propagator_comp/propagator_comp_zolo4_szinev_c0.xml.ini, propagator_comp/propagator_comp_zolo5_c0.linux-scalar-intel.xml, propagator_comp/propagator_comp_zolo5_c0.xml.ini, propagator_comp/propagator_comp_zolo5_c1.linux-scalar-intel.xml, propagator_comp/propagator_comp_zolo5_c1.xml.ini, propagator_comp/propagator_comp_zolo5_c2.linux-scalar-intel.xml, propagator_comp/propagator_comp_zolo5_c2.xml.ini, propagator_comp/propagator_comp_zolo5_szinev_c0.xml.ini, propagator_comp/run_zolo4.sh, propagator_comp/run_zolo5.sh: Cleaned out. 2006-04-15 23:29 edwards * tests/: m_res4d/mres4_tanh.xml.ini, m_res4d/mres4_zolo_nef.xml.ini, m_res4d/prop_CONTFRAC_BORICI.xml.ini, m_res4d/prop_NEF_BORICI.linux-scalar-intel.xml, m_res4d/prop_NEF_BORICI.xml.ini, m_res4d/t_mres_4d.linux-scalar-intel.xml, propagator_w/INPUT_W.xml, propagator_w/t_propagator_w.xml, propagator_w/t_propagator_w_METRIC.xml: Removed. 2006-04-15 23:21 tag chroma3-1-1 2006-04-15 23:21 edwards * aclocal.m4, configure: Induced changes. 2006-04-15 23:19 edwards * configure.ac: Fixed run command. 2006-04-15 23:07 edwards * lib/meas/schrfun/sfpcac_w.cc: Changed normalization. 2006-04-15 23:06 edwards * lib/: io/enum_io/enum_cfgtype_io.cc, io/enum_io/enum_cfgtype_io.h, util/gauge/gauge_startup.cc: Added CLASSICAL_SF 2006-04-15 00:01 edwards * install_scripts/jlab/config_chroma_scalar.sh: Install paths are changing 2006-04-14 23:59 edwards * NEWS: Info on 3.1.1 2006-04-14 23:58 edwards * configure: Induced change. 2006-04-14 23:57 edwards * configure.ac: Added writing a RUN command for make xcheck 2006-04-14 23:56 edwards * aclocal.m4: Induced changes. 2006-04-14 23:55 edwards * Makefile.am: Added the run script to xcheck 2006-04-14 23:54 edwards * scripts/run_chroma_xmldiff.pl: Now uses a run script 2006-04-14 14:44 edwards * tests/regres.pl: Added bar3ptfn 2006-04-14 14:43 edwards * tests/chroma/hadron/bar3ptfn/: bar3ptfn.metric.xml, bar3ptfn.out.xml, regres.pl: New regression tests. 2006-04-14 11:18 edwards * tests/regres.pl: Rearranged order of tests 2006-04-14 11:17 edwards * tests/regres.pl: New regression tests. 2006-04-13 15:25 edwards * tests/chroma/io/: qio_read_obj/qio_read_obj.ini.xml, qio_read_obj/qio_read_obj.metric.xml, qio_read_obj/qio_read_obj.out.xml, qio_read_obj/regres.pl, szin_read_obj/regres.pl, szin_read_obj/szin_read_obj.ini.xml, szin_read_obj/szin_read_obj.metric.xml, szin_read_obj/szin_read_obj.out.xml: More regression tests. 2006-04-13 11:07 edwards * tests/chroma/schrfun/: schrfun.ini.xml, schrfun.out.xml: Normalization changes. 2006-04-12 12:50 edwards * tests/chroma/schrfun/: schrfun.ini.xml, schrfun.out.xml: Appears to work 2006-04-11 21:28 edwards * lib/meas/schrfun/sfpcac_w.cc: Bug fixes. 2006-04-11 13:24 edwards * lib/actions/gauge/gaugebcs/schr_gaugebc_params.cc: Added missing default constructor. 2006-04-11 12:25 tag chroma3-1-0 2006-04-11 12:25 edwards * aclocal.m4, configure: Induced changes. 2006-04-11 00:18 edwards * NEWS, lib/meas/inline/eig/inline_eigbnds.cc, lib/meas/inline/eig/inline_ritz_H_w.cc, lib/meas/inline/gfix/inline_coulgauge.cc, lib/meas/inline/glue/inline_fuzwilp.cc, lib/meas/inline/glue/inline_fuzwilp.h, lib/meas/inline/glue/inline_plaquette.cc, lib/meas/inline/glue/inline_polylp.cc, lib/meas/inline/glue/inline_wilslp.cc, lib/meas/inline/glue/inline_wilslp.h, lib/meas/inline/hadron/inline_bar3ptfn_w.cc, lib/meas/inline/hadron/inline_building_blocks_w.cc, lib/meas/inline/hadron/inline_hadspec_w.cc, lib/meas/inline/hadron/inline_make_source_ferm_w.cc, lib/meas/inline/hadron/inline_make_source_w.cc, lib/meas/inline/hadron/inline_mesonspec_w.cc, lib/meas/inline/hadron/inline_mres_w.cc, lib/meas/inline/hadron/inline_multi_propagator_w.cc, lib/meas/inline/hadron/inline_multipole_w.cc, lib/meas/inline/hadron/inline_noisy_building_blocks_w.cc, lib/meas/inline/hadron/inline_propagator_ferm_w.cc, lib/meas/inline/hadron/inline_propagator_w.cc, lib/meas/inline/hadron/inline_qqbar_w.cc, lib/meas/inline/hadron/inline_qqqNucNuc_w.cc, lib/meas/inline/hadron/inline_qqq_w.cc, lib/meas/inline/hadron/inline_seqsource_w.cc, lib/meas/inline/hadron/inline_sink_smear_w.cc, lib/meas/inline/hadron/inline_spectrumOct_w.cc, lib/meas/inline/hadron/inline_spectrum_w.cc, lib/meas/inline/hadron_s/inline_spectrum_s.cc, lib/meas/inline/io/default_gauge_field.cc, lib/meas/inline/io/default_gauge_field.h, lib/meas/inline/smear/inline_ape_smear.cc, lib/meas/inline/smear/inline_hyp_smear.cc, lib/meas/inline/smear/inline_link_smear.cc, lib/meas/inline/smear/inline_stout_smear.cc, tests/chroma/eig/eigbnds-v1.ini.xml, tests/chroma/eig/ritz_Hw-v1.ini.xml, tests/chroma/eig/ritz_Hw-v1.out.xml, tests/chroma/gfix/coulgauge/coulgauge.ini.xml, tests/chroma/gfix/coulgauge/coulgauge.out.xml, tests/chroma/glue/fuzwilp/fuzwilp.ini.xml, tests/chroma/glue/fuzwilp/fuzwilp.out.xml, tests/chroma/glue/wilslp/wilslp.ini.xml, tests/chroma/glue/wilslp/wilslp.out.xml, tests/chroma/hadron/bar3ptfn/bar3ptfn.ini.xml, tests/chroma/hadron/building_blocks/bb.ini.xml, tests/chroma/hadron/building_blocks/bb.out.xml, tests/chroma/hadron/make_source/dilute.ini.xml, tests/chroma/hadron/make_source/dilute.out.xml, tests/chroma/hadron/make_source/make_source.ini.xml, tests/chroma/hadron/make_source/make_source.out.xml, tests/chroma/hadron/make_source/source-deriv.ini.xml, tests/chroma/hadron/make_source/source-deriv.out.xml, tests/chroma/hadron/make_source/source-displace.ini.xml, tests/chroma/hadron/make_source/source-displace.out.xml, tests/chroma/hadron/mesonspec/mesonspec.ini.xml, tests/chroma/hadron/mesonspec/mesonspec.out.xml, tests/chroma/hadron/mres/mres.ini.xml, tests/chroma/hadron/mres/mres.out.xml, tests/chroma/hadron/noisy_building_blocks/nbb.ini.xml, tests/chroma/hadron/propagator/prec_clover.ini.xml, tests/chroma/hadron/propagator/prec_clover.out.xml, tests/chroma/hadron/propagator/prec_dwf.ini.xml, tests/chroma/hadron/propagator/prec_dwf.out.xml, tests/chroma/hadron/propagator/prec_ht_contfrac5d.ini.xml, tests/chroma/hadron/propagator/prec_ht_contfrac5d.out.xml, tests/chroma/hadron/propagator/prec_ovext.ini.xml, tests/chroma/hadron/propagator/prec_ovext.out.xml, tests/chroma/hadron/propagator/prec_ovlap_contfrac5d.ini.xml, tests/chroma/hadron/propagator/prec_ovlap_contfrac5d.out.xml, tests/chroma/hadron/propagator/prec_parwilson.ini.xml, tests/chroma/hadron/propagator/prec_parwilson.out.xml, tests/chroma/hadron/propagator/prec_wilson-smearing.out.xml, tests/chroma/hadron/propagator/prec_wilson-twisted.ini.xml, tests/chroma/hadron/propagator/prec_wilson-twisted.out.xml, tests/chroma/hadron/propagator/prec_wilson.ferm.ini.xml, tests/chroma/hadron/propagator/prec_wilson.ini.xml, tests/chroma/hadron/propagator/prec_wilson.out.xml, tests/chroma/hadron/propagator/prec_zolo_nef.ini.xml, tests/chroma/hadron/propagator/prec_zolo_nef.out.xml, tests/chroma/hadron/propagator/unprec-ovlap-zolo4d.ini.xml, tests/chroma/hadron/propagator/unprec-ovlap-zolo4d.out.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi.ini.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi.out.xml, tests/chroma/hadron/propagator/unprec_clover.ini.xml, tests/chroma/hadron/propagator/unprec_clover.out.xml, tests/chroma/hadron/propagator/unprec_dwftransf.ini.xml, tests/chroma/hadron/propagator/unprec_dwftransf.out.xml, tests/chroma/hadron/propagator/unprec_hamberwu.ini.xml, tests/chroma/hadron/propagator/unprec_hamberwu.out.xml, tests/chroma/hadron/propagator/unprec_ovext.ini.xml, tests/chroma/hadron/propagator/unprec_ovext.out.xml, tests/chroma/hadron/propagator/unprec_ovlap_contfrac5d.ini.xml, tests/chroma/hadron/propagator/unprec_ovlap_contfrac5d.out.xml, tests/chroma/hadron/propagator/unprec_zolo_nef.ini.xml, tests/chroma/hadron/propagator/unprec_zolo_nef.out.xml, tests/chroma/hadron/qqbar/qqbar.ini.xml, tests/chroma/hadron/qqq/qqq.ini.xml, tests/chroma/hadron/qqqNucNuc/qqqNucNuc.ini.xml, tests/chroma/hadron/seqsource/seqsource-baryon.ini.xml, tests/chroma/hadron/seqsource/seqsource-baryon.out.xml, tests/chroma/hadron/seqsource/seqsource-derivmeson.ini.xml, tests/chroma/hadron/seqsource/seqsource-meson.ini.xml, tests/chroma/hadron/seqsource/seqsource-meson.out.xml, tests/chroma/hadron/seqsource/seqsource-photon.ini.xml, tests/chroma/hadron/sink_smear/sink-deriv.ini.xml, tests/chroma/hadron/sink_smear/sink-deriv.out.xml, tests/chroma/hadron/sink_smear/sink-displace.ini.xml, tests/chroma/hadron/sink_smear/sink-displace.out.xml, tests/chroma/hadron/sink_smear/sink_smearing.ini.xml, tests/chroma/hadron/sink_smear/sink_smearing.out.xml, tests/chroma/hadron/spectrum/spectrum-v12.ini.xml, tests/chroma/hadron/spectrum/spectrum-v12.out.xml, tests/chroma/hadron/spectrumOct/spectrumOct-v11.ini.xml, tests/chroma/hadron/spectrumOct/spectrumOct-v11.out.xml, tests/chroma/hadron_s/spectrum_s/spectrum_s.ini.xml, tests/chroma/hadron_s/spectrum_s/spectrum_s.out.xml, tests/chroma/smear/ape_smear/ape_smear_v2.ini.xml, tests/chroma/smear/hyp_smear/hyp_smear_v4.ini.xml, tests/chroma/smear/link_smear/link_smear.ini.xml, tests/chroma/smear/link_smear/link_smear.out.xml, tests/chroma/smear/stout_smear/stout_smear_v2.ini.xml, tests/hmc/hmc.prec_wilson.ini.xml, tests/hmc/hmc.prec_wilson.out.xml, tests/purgaug/purgaug.ini.xml, tests/purgaug/purgaug.out.xml, tests/spectrum_s/spectrum_s_reg.xml, tests/spectrum_s/spectrum_s_reg_test_output.xml: Changed default behavior of all inlines to now require an explicit "NamedObject/gauge_id" to be specified. No longer is there a default gauge field implicitly assumed. 2006-04-11 00:16 edwards * lib/meas/schrfun/sfpcac_w.cc: Small cleanup of output. 2006-04-10 23:02 edwards * lib/actions/ferm/qprop/prec_fermact_qprop_array.cc: Removed debugging. 2006-04-10 20:42 edwards * tests/chroma/schrfun/: schrfun.ini.xml, schrfun.out.xml: Tests not quite ready. 2006-04-10 20:40 edwards * tests/t_leapfrog/: t_leapfrog.prec_2flav_clover.sfnonpt.ini.xml, t_leapfrog.prec_2flav_clover.sfnonpt.out.xml: Shortened test. 2006-04-10 19:48 edwards * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_2flav_clover.sfnonpt.ini.xml, t_leapfrog.prec_2flav_clover.sfnonpt.out.xml: Updated and fixed name of SF regression test 2006-04-10 17:23 edwards * configure, aclocal.m4: Induced changes. 2006-04-10 17:22 edwards * configure.ac: Changed to 3.1.0 2006-04-10 17:22 edwards * lib/Makefile.am: Added schroedinger code. 2006-04-10 17:21 edwards * lib/actions/gauge/gaugebcs/schr_sf_gaugebc.cc: Removed ifdef'd code 2006-04-10 17:21 edwards * lib/actions/ferm/fermbcs/: schr_chromomag_fermbc_w.h, schr_coupling_fermbc_w.h, schr_dirich_fermbc_w.h, schr_nonpert_fermbc_w.h, schr_sf_fermbc_w.cc, schr_sf_fermbc_w.h, schr_triv_fermbc_w.h, schroedinger_fermbc_w.h: Added some more functions. 2006-04-10 17:20 edwards * lib/actions/ferm/fermacts/clover_fermact_params_w.cc: Added some spaces. 2006-04-10 17:18 edwards * lib/meas/schrfun/: schrfun.h, sfcurcor_w.cc, sfcurcor_w.h, sfpcac_w.cc, sfpcac_w.h: New measurements. 2006-04-10 17:17 edwards * lib/meas/inline/: inline_aggregate.cc, schrfun/inline_schrfun_aggregate.cc, schrfun/inline_schrfun_aggregate.h, schrfun/inline_sfpcac_w.cc, schrfun/inline_sfpcac_w.h, schrfun/schrfun.h: Added schroedinger functional measurements 2006-04-10 17:16 edwards * lib/meas/inline/hadron/inline_polar_source_w.cc: Start of polarizability 2006-04-10 17:16 edwards * lib/meas/inline/hadron/: inline_propagator_w.cc, inline_propagator_w.h: Removed some dangling ";" 2006-04-10 17:14 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Cleaned up 2006-04-10 17:06 edwards * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_2flav_clover.sfnonpt.ini.xml, t_leapfrog.prec_2flav_clover.sfnonpt.metric.xml, t_leapfrog.prec_2flav_clover.sfnonpt.out.xml: Added new sf nonpert test. 2006-04-06 16:14 edwards * lib/Makefile.am: Added gamma insertion/displacement. 2006-04-06 16:14 edwards * lib/meas/smear/: gamma_displacement_w.cc, gamma_displacement_w.h, quark_displacement_aggregate.cc: Added gamma type of insertion/displacement. 2006-04-05 11:30 tag chroma3-0-1 2006-04-05 11:30 edwards * lib/actions/ferm/linop/lwldslash_array_pab_w.cc: Added missing empty constructor (which really is empty). 2006-04-04 16:29 edwards * aclocal.m4, configure: Induced changes. 2006-04-04 16:29 edwards * NEWS: Info on 3.0.1 2006-04-04 16:28 edwards * configure.ac: Changed to 3.0.1 2006-04-04 16:25 edwards * lib/actions/ferm/linop/lwldslash_w_pab.cc: Fixed typo. Changed a "u_" to "state->getLinks()". 2006-04-04 11:29 edwards * lib/actions/ferm/linop/lwldslash_array_pab_w.h: Added missing getFermBC and fbc !! 2006-04-04 11:24 edwards * lib/Makefile.am: Added missing create_state.h 2006-04-03 13:06 edwards * lib/Makefile.am: Added missing boundcond.h 2006-04-03 13:03 edwards * lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.h: Fix. Had missing "Array" on EvenOddPrecConstDetLinOp. 2006-04-03 12:58 edwards * lib/actions/ferm/linop/: lwldslash_array_pab_w.cc, lwldslash_array_pab_w.h, lwldslash_array_sse_w.cc, lwldslash_array_w.cc: Added missing FermState inits to pab version. Tried to make all these codes look more alike. 2006-04-03 02:07 tag chroma3-0-0 2006-04-03 02:07 edwards * mainprogs/tests/t_dwflocality.cc: Fixed to use SystemSolverArray. 2006-04-03 00:58 edwards * AUTHORS, COPYING, INSTALL, INSTALL.ibm, Makefile.am, NEWS, README, TODO, acinclude.m4, chroma-config.in, configure, PBS/spectrum/README, PBS/spectrum/bin/parse_baryons.pl, PBS/spectrum/bin/parse_qqq.pl, PBS/spectrum/bin/parse_qs.pl, PBS/spectrum/lib/Parse_groups.pm, PBS/spectrum/scripts/create_pbs.pl, PBS/spectrum/scripts/create_pbs.pl-template, PBS/spectrum/scripts/parse_qqq.pl, PBS/spectrum/scripts/parse_qs.pl, PBS/spectrum/scripts/run_complete_job.pl, PBS/spectrum/scripts/run_complete_job.sh, PBS/spectrum/scripts/run_qqq.sh, PBS/spectrum/scripts/run_qqq_spectrum.sh, PBS/spectrum/scripts/smear_tune_submit.sh, config/config.guess, config/config.sub, config/depcomp, config/install-sh, config/missing, config/mkinstalldirs, docs/Makefile.am, docs/chromadoc, docs/chromadoc.in, docs/faq.txt, docs/manual.tex, docs/tutorial.html, docs/notes/anisoHQ.tex, docs/notes/baryon_3pt.tex, docs/notes/chiral.tex, docs/notes/chroma_gamma_matrices.tex, docs/notes/deltanotes.tex, docs/notes/force.tex, docs/notes/gamma_conventions.tex, docs/notes/hmc.tex, docs/notes/meson_corr_construct.tex, docs/notes/meson_sequential_source.tex, docs/notes/multicg.tex, docs/notes/o3_to_u1.tex, docs/notes/overlap_5dim.tex, docs/notes/overlap_proj_hmc.tex, docs/notes/pinotes_v2.tex, docs/notes/rossi_basis_v2.tex, docs/notes/trunc_ov_5d.tex, install_scripts/LIVERPOOL/Makefile_link, install_scripts/LIVERPOOL/get_chroma.csh, install_scripts/LIVERPOOL/install_chroma.sh, install_scripts/NERSC/configure_chroma.sh, install_scripts/QCDOC/CU_qcdochost0/README, install_scripts/QCDOC/CU_qcdochost0/configure_chroma.sh, install_scripts/QCDOC/CU_qcdochost0/configure_chroma_no_pab_dslash.sh, install_scripts/cygwin/config_chroma_parscalar-single.sh, install_scripts/cygwin/config_chroma_scalar.sh, install_scripts/jlab/build.csh, install_scripts/jlab/build2m-intel.csh, install_scripts/jlab/build2m.csh, install_scripts/jlab/build3g.csh, install_scripts/jlab/build_some.csh, install_scripts/jlab/build_some_k2.6.csh, install_scripts/jlab/config_chroma_parscalar-gigE-double.sh, install_scripts/jlab/config_chroma_parscalar-gigE.sh, install_scripts/jlab/config_chroma_parscalar-gm-double.sh, install_scripts/jlab/config_chroma_parscalar-gm.sh, install_scripts/jlab/config_chroma_parscalar-single.sh, install_scripts/jlab/config_chroma_scalar.sh, install_scripts/jlab/install_some.csh, install_scripts/jlab/install_some_all.csh, lib/boundcond.h, lib/chroma.h, lib/chroma_config.h, lib/chroma_config_internal.h.in, lib/chromabase.h, lib/chromainc.h, lib/common_declarations.h, lib/create_state.h, lib/eo_prec_linop.h, lib/fermact.h, lib/fermbc.h, lib/funcmap.h, lib/gaugeact.h, lib/gaugebc.h, lib/handle.h, lib/invtype.h, lib/lib.h, lib/linearop.h, lib/lmdagm.h, lib/named_obj.h, lib/objfactory.h, lib/objfunctor.h, lib/polyfermact.h, lib/polylinop.h, lib/prec_constdet_linop.h, lib/prec_logdet_linop.h, lib/primitives.h, lib/singleton.h, lib/state.h, lib/syssolver.h, lib/tpreclinop.h, lib/typeinfo.h, lib/typelist.h, lib/typemanip.h, lib/typetraits.h, lib/actions/actions.h, lib/actions/boson/boson.h, lib/actions/boson/operator/klein_gord.cc, lib/actions/boson/operator/klein_gord.h, lib/actions/ferm/ferm.h, lib/actions/ferm/fermacts/asqtad_fermact_s.cc, lib/actions/ferm/fermacts/asqtad_fermact_s.h, lib/actions/ferm/fermacts/asqtad_state.h, lib/actions/ferm/fermacts/bigfloat.h, lib/actions/ferm/fermacts/clover_fermact_params_w.cc, lib/actions/ferm/fermacts/clover_fermact_params_w.h, lib/actions/ferm/fermacts/eigen_state.h, lib/actions/ferm/fermacts/ferm_createstate_aggregate_s.cc, lib/actions/ferm/fermacts/ferm_createstate_aggregate_s.h, lib/actions/ferm/fermacts/ferm_createstate_aggregate_w.cc, lib/actions/ferm/fermacts/ferm_createstate_aggregate_w.h, lib/actions/ferm/fermacts/ferm_createstate_factory_s.h, lib/actions/ferm/fermacts/ferm_createstate_factory_w.h, lib/actions/ferm/fermacts/ferm_createstate_reader_s.cc, lib/actions/ferm/fermacts/ferm_createstate_reader_s.h, lib/actions/ferm/fermacts/ferm_createstate_reader_w.cc, lib/actions/ferm/fermacts/ferm_createstate_reader_w.h, lib/actions/ferm/fermacts/fermact_factory_w.h, lib/actions/ferm/fermacts/fermacts.h, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/fermacts/fermacts_aggregate_w.h, lib/actions/ferm/fermacts/fermacts_s.h, lib/actions/ferm/fermacts/fermacts_w.h, lib/actions/ferm/fermacts/overlap_fermact_base_w.cc, lib/actions/ferm/fermacts/overlap_fermact_base_w.h, lib/actions/ferm/fermacts/overlap_state.cc, lib/actions/ferm/fermacts/overlap_state.h, lib/actions/ferm/fermacts/ovext_const_div_by_resp_strategy.cc, lib/actions/ferm/fermacts/ovext_const_div_by_resp_strategy.h, lib/actions/ferm/fermacts/ovext_constant_strategy.cc, lib/actions/ferm/fermacts/ovext_constant_strategy.h, lib/actions/ferm/fermacts/ovext_neuberger_strategy.cc, lib/actions/ferm/fermacts/ovext_neuberger_strategy.h, lib/actions/ferm/fermacts/ovext_tuning_strategy.h, lib/actions/ferm/fermacts/ovext_tuning_strategy_aggregate.cc, lib/actions/ferm/fermacts/ovext_tuning_strategy_aggregate.h, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.cc, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.h, lib/actions/ferm/fermacts/periodic_fermstate.h, lib/actions/ferm/fermacts/periodic_fermstate_s.cc, lib/actions/ferm/fermacts/periodic_fermstate_s.h, lib/actions/ferm/fermacts/periodic_fermstate_w.cc, lib/actions/ferm/fermacts/periodic_fermstate_w.h, lib/actions/ferm/fermacts/poly_cheb_fermact_w.cc, lib/actions/ferm/fermacts/poly_cheb_fermact_w.h, lib/actions/ferm/fermacts/prec_clover_fermact_w.cc, lib/actions/ferm/fermacts/prec_clover_fermact_w.h, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_dwf_fermact_base_array_w.h, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_kno_fermact_array_w.h, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovdwf_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovdwf_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/prec_parwilson_fermact_w.cc, lib/actions/ferm/fermacts/prec_parwilson_fermact_w.h, lib/actions/ferm/fermacts/prec_stout_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_stout_fermact_array_w.h, lib/actions/ferm/fermacts/prec_stout_fermact_w.cc, lib/actions/ferm/fermacts/prec_stout_fermact_w.h, lib/actions/ferm/fermacts/prec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/prec_wilson_fermact_w.h, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermacts/remez.h, lib/actions/ferm/fermacts/remez_coeff.h, lib/actions/ferm/fermacts/remez_gmp.cc, lib/actions/ferm/fermacts/remez_gmp.h, lib/actions/ferm/fermacts/remez_stub.h, lib/actions/ferm/fermacts/simple_fermstate.h, lib/actions/ferm/fermacts/simple_fermstate_s.cc, lib/actions/ferm/fermacts/simple_fermstate_s.h, lib/actions/ferm/fermacts/simple_fermstate_w.cc, lib/actions/ferm/fermacts/simple_fermstate_w.h, lib/actions/ferm/fermacts/stag_fermact_s.cc, lib/actions/ferm/fermacts/stag_fermact_s.h, lib/actions/ferm/fermacts/stout_fermact_params.cc, lib/actions/ferm/fermacts/stout_fermact_params.h, lib/actions/ferm/fermacts/stout_state.cc, lib/actions/ferm/fermacts/stout_state.h, lib/actions/ferm/fermacts/unprec_clover_fermact_w.cc, lib/actions/ferm/fermacts/unprec_clover_fermact_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_dwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_dwf_fermact_base_array_w.h, lib/actions/ferm/fermacts/unprec_dwftransf_fermact_w.cc, lib/actions/ferm/fermacts/unprec_dwftransf_fermact_w.h, lib/actions/ferm/fermacts/unprec_hamberwu_fermact_w.cc, lib/actions/ferm/fermacts/unprec_hamberwu_fermact_w.h, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_nef_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovdwf_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovdwf_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovext_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_parwilson_fermact_w.cc, lib/actions/ferm/fermacts/unprec_parwilson_fermact_w.h, lib/actions/ferm/fermacts/unprec_stout_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_stout_fermact_array_w.h, lib/actions/ferm/fermacts/unprec_stout_fermact_w.cc, lib/actions/ferm/fermacts/unprec_stout_fermact_w.h, lib/actions/ferm/fermacts/unprec_w12_fermact_w.cc, lib/actions/ferm/fermacts/unprec_w12_fermact_w.h, lib/actions/ferm/fermacts/unprec_wilson_fermact_w.cc, lib/actions/ferm/fermacts/unprec_wilson_fermact_w.h, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.cc, lib/actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.h, lib/actions/ferm/fermacts/wilson_fermact_params_w.cc, lib/actions/ferm/fermacts/wilson_fermact_params_w.h, lib/actions/ferm/fermacts/zolotarev.h, lib/actions/ferm/fermacts/zolotarev_coeffs.cc, lib/actions/ferm/fermbcs/fermbc_factory_s.h, lib/actions/ferm/fermbcs/fermbc_factory_w.h, lib/actions/ferm/fermbcs/fermbcs.h, lib/actions/ferm/fermbcs/fermbcs_aggregate_s.cc, lib/actions/ferm/fermbcs/fermbcs_aggregate_s.h, lib/actions/ferm/fermbcs/fermbcs_aggregate_w.cc, lib/actions/ferm/fermbcs/fermbcs_aggregate_w.h, lib/actions/ferm/fermbcs/fermbcs_reader_s.cc, lib/actions/ferm/fermbcs/fermbcs_reader_s.h, lib/actions/ferm/fermbcs/fermbcs_reader_w.cc, lib/actions/ferm/fermbcs/fermbcs_reader_w.h, lib/actions/ferm/fermbcs/periodic_fermbc.h, lib/actions/ferm/fermbcs/periodic_fermbc_w.cc, lib/actions/ferm/fermbcs/periodic_fermbc_w.h, lib/actions/ferm/fermbcs/schr_chromomag_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_chromomag_fermbc_w.h, lib/actions/ferm/fermbcs/schr_coupling_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_coupling_fermbc_w.h, lib/actions/ferm/fermbcs/schr_dirich_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_dirich_fermbc_w.h, lib/actions/ferm/fermbcs/schr_fermbc_params_w.cc, lib/actions/ferm/fermbcs/schr_fermbc_params_w.h, lib/actions/ferm/fermbcs/schr_nonpert_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_nonpert_fermbc_w.h, lib/actions/ferm/fermbcs/schr_sf_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_sf_fermbc_w.h, lib/actions/ferm/fermbcs/schr_triv_fermbc_w.cc, lib/actions/ferm/fermbcs/schr_triv_fermbc_w.h, lib/actions/ferm/fermbcs/schroedinger_fermbc_w.h, lib/actions/ferm/fermbcs/simple_fermbc.cc, lib/actions/ferm/fermbcs/simple_fermbc.h, lib/actions/ferm/fermbcs/simple_fermbc_s.cc, lib/actions/ferm/fermbcs/simple_fermbc_s.h, lib/actions/ferm/fermbcs/simple_fermbc_w.cc, lib/actions/ferm/fermbcs/simple_fermbc_w.h, lib/actions/ferm/fermbcs/twisted_fermbc_w.cc, lib/actions/ferm/fermbcs/twisted_fermbc_w.h, lib/actions/ferm/invert/inv_borici_w.cc, lib/actions/ferm/invert/inv_borici_w.h, lib/actions/ferm/invert/inv_gmresr_cg_array.cc, lib/actions/ferm/invert/inv_gmresr_cg_array.h, lib/actions/ferm/invert/inv_minres_array.cc, lib/actions/ferm/invert/inv_minres_array.h, lib/actions/ferm/invert/inv_rel_cg1.cc, lib/actions/ferm/invert/inv_rel_cg1.h, lib/actions/ferm/invert/inv_rel_cg2.cc, lib/actions/ferm/invert/inv_rel_cg2.h, lib/actions/ferm/invert/inv_rel_gmresr_cg.cc, lib/actions/ferm/invert/inv_rel_gmresr_cg.h, lib/actions/ferm/invert/inv_rel_gmresr_sumr.cc, lib/actions/ferm/invert/inv_rel_gmresr_sumr.h, lib/actions/ferm/invert/inv_rel_sumr.cc, lib/actions/ferm/invert/inv_rel_sumr.h, lib/actions/ferm/invert/invbicg.cc, lib/actions/ferm/invert/invbicgstab.cc, lib/actions/ferm/invert/invbicgstab.h, lib/actions/ferm/invert/invbicgstab_array.cc, lib/actions/ferm/invert/invbicgstab_array.h, lib/actions/ferm/invert/invcg1.cc, lib/actions/ferm/invert/invcg1.h, lib/actions/ferm/invert/invcg1_array.cc, lib/actions/ferm/invert/invcg1_array.h, lib/actions/ferm/invert/invcg2.cc, lib/actions/ferm/invert/invcg2.h, lib/actions/ferm/invert/invcg2_array.cc, lib/actions/ferm/invert/invcg2_array.h, lib/actions/ferm/invert/invcg2_timing_hacks.cc, lib/actions/ferm/invert/invcg2_timing_hacks.h, lib/actions/ferm/invert/invert.h, lib/actions/ferm/invert/invmr.cc, lib/actions/ferm/invert/invmr.h, lib/actions/ferm/invert/invsumr.cc, lib/actions/ferm/invert/invsumr.h, lib/actions/ferm/invert/minv_rel_cg.cc, lib/actions/ferm/invert/minv_rel_cg.h, lib/actions/ferm/invert/minv_rel_sumr.cc, lib/actions/ferm/invert/minv_rel_sumr.h, lib/actions/ferm/invert/minvcg.cc, lib/actions/ferm/invert/minvcg.h, lib/actions/ferm/invert/minvcg_array.cc, lib/actions/ferm/invert/minvcg_array.h, lib/actions/ferm/invert/minvsumr.cc, lib/actions/ferm/invert/minvsumr.h, lib/actions/ferm/linop/asq_dsl_s.cc, lib/actions/ferm/linop/asq_dsl_s.h, lib/actions/ferm/linop/asqtad_dslash.h, lib/actions/ferm/linop/asqtad_linop_s.cc, lib/actions/ferm/linop/asqtad_linop_s.h, lib/actions/ferm/linop/asqtad_mdagm_s.cc, lib/actions/ferm/linop/asqtad_mdagm_s.h, lib/actions/ferm/linop/clover_term_base_w.cc, lib/actions/ferm/linop/clover_term_base_w.h, lib/actions/ferm/linop/clover_term_qdp_w.cc, lib/actions/ferm/linop/clover_term_qdp_w.h, lib/actions/ferm/linop/clover_term_w.h, lib/actions/ferm/linop/dslash_array_w.h, lib/actions/ferm/linop/dslash_w.h, lib/actions/ferm/linop/dwffld_w.cc, lib/actions/ferm/linop/dwffld_w.h, lib/actions/ferm/linop/fat7_links_s.cc, lib/actions/ferm/linop/improvement_terms_s.h, lib/actions/ferm/linop/lDeltaLs_w.cc, lib/actions/ferm/linop/lDeltaLs_w.h, lib/actions/ferm/linop/ldumul_w.cc, lib/actions/ferm/linop/lg5Rherm_w.h, lib/actions/ferm/linop/lg5eps_double_pass_w.cc, lib/actions/ferm/linop/lg5eps_double_pass_w.h, lib/actions/ferm/linop/lg5eps_w.cc, lib/actions/ferm/linop/lg5eps_w.h, lib/actions/ferm/linop/lgherm_w.h, lib/actions/ferm/linop/linop.h, lib/actions/ferm/linop/linop_s.h, lib/actions/ferm/linop/linop_w.h, lib/actions/ferm/linop/llincomb.h, lib/actions/ferm/linop/lopscl.h, lib/actions/ferm/linop/lovddag_double_pass_w.cc, lib/actions/ferm/linop/lovddag_double_pass_w.h, lib/actions/ferm/linop/lovddag_w.cc, lib/actions/ferm/linop/lovddag_w.h, lib/actions/ferm/linop/lovlap_double_pass_w.cc, lib/actions/ferm/linop/lovlap_double_pass_w.h, lib/actions/ferm/linop/lovlapms_w.cc, lib/actions/ferm/linop/lovlapms_w.h, lib/actions/ferm/linop/lwldslash_array_pab_w.cc, lib/actions/ferm/linop/lwldslash_array_pab_w.h, lib/actions/ferm/linop/lwldslash_array_sse_w.cc, lib/actions/ferm/linop/lwldslash_array_sse_w.h, lib/actions/ferm/linop/lwldslash_array_w.cc, lib/actions/ferm/linop/lwldslash_array_w.h, lib/actions/ferm/linop/lwldslash_base_array_w.cc, lib/actions/ferm/linop/lwldslash_base_array_w.h, lib/actions/ferm/linop/lwldslash_base_w.cc, lib/actions/ferm/linop/lwldslash_base_w.h, lib/actions/ferm/linop/lwldslash_w.cc, lib/actions/ferm/linop/lwldslash_w.h, lib/actions/ferm/linop/lwldslash_w_pab.cc, lib/actions/ferm/linop/lwldslash_w_pab.h, lib/actions/ferm/linop/lwldslash_w_sse.cc, lib/actions/ferm/linop/lwldslash_w_sse.h, lib/actions/ferm/linop/naik_term_s.cc, lib/actions/ferm/linop/overlapbu_linop_w.cc, lib/actions/ferm/linop/overlapbu_linop_w.h, lib/actions/ferm/linop/ovlap_contfrac5d_w.h, lib/actions/ferm/linop/partrat.h, lib/actions/ferm/linop/polprec_op.h, lib/actions/ferm/linop/polynomial_op.h, lib/actions/ferm/linop/prec_clover_linop_w.cc, lib/actions/ferm/linop/prec_clover_linop_w.h, lib/actions/ferm/linop/prec_dwf_linop_array_w.cc, lib/actions/ferm/linop/prec_dwf_linop_array_w.h, lib/actions/ferm/linop/prec_dwflike_linop_base_array_w.h, lib/actions/ferm/linop/prec_ht_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/prec_ht_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/prec_nef_general_linop_array_w.cc, lib/actions/ferm/linop/prec_nef_general_linop_array_w.h, lib/actions/ferm/linop/prec_nef_linop_array_w.cc, lib/actions/ferm/linop/prec_nef_linop_array_w.h, lib/actions/ferm/linop/prec_ovdwf_linop_array_w.cc, lib/actions/ferm/linop/prec_ovdwf_linop_array_w.h, lib/actions/ferm/linop/prec_ovext_linop_array_w.cc, lib/actions/ferm/linop/prec_ovext_linop_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_opt_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_opt_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_base_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_base_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_pv_linop_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_pv_linop_array_w.h, lib/actions/ferm/linop/prec_parwilson_linop_w.cc, lib/actions/ferm/linop/prec_parwilson_linop_w.h, lib/actions/ferm/linop/prec_wilson_linop_w.cc, lib/actions/ferm/linop/prec_wilson_linop_w.h, lib/actions/ferm/linop/unprec_clover_linop_w.cc, lib/actions/ferm/linop/unprec_clover_linop_w.h, lib/actions/ferm/linop/unprec_dwf4d_linop_w.cc, lib/actions/ferm/linop/unprec_dwf4d_linop_w.h, lib/actions/ferm/linop/unprec_dwf_linop_array_w.cc, lib/actions/ferm/linop/unprec_dwf_linop_array_w.h, lib/actions/ferm/linop/unprec_dwflike_linop_base_array_w.h, lib/actions/ferm/linop/unprec_dwftransf_linop_w.cc, lib/actions/ferm/linop/unprec_dwftransf_linop_w.h, lib/actions/ferm/linop/unprec_hamberwu_linop_w.cc, lib/actions/ferm/linop/unprec_hamberwu_linop_w.h, lib/actions/ferm/linop/unprec_ht_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/unprec_ht_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/unprec_nef_linop_array_w.cc, lib/actions/ferm/linop/unprec_nef_linop_array_w.h, lib/actions/ferm/linop/unprec_ovdwf_linop_array_w.cc, lib/actions/ferm/linop/unprec_ovdwf_linop_array_w.h, lib/actions/ferm/linop/unprec_ovext_linop_array_w.cc, lib/actions/ferm/linop/unprec_ovext_linop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_nonhermop_array_w.cc, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_nonhermop_array_w.h, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_pv_linop_array_w.cc, lib/actions/ferm/linop/unprec_ovlap_contfrac5d_pv_linop_array_w.h, lib/actions/ferm/linop/unprec_parwilson_linop_w.cc, lib/actions/ferm/linop/unprec_parwilson_linop_w.h, lib/actions/ferm/linop/unprec_pdwf4d_linop_w.cc, lib/actions/ferm/linop/unprec_pdwf4d_linop_w.h, lib/actions/ferm/linop/unprec_ppdwf4d_linop_w.cc, lib/actions/ferm/linop/unprec_ppdwf4d_linop_w.h, lib/actions/ferm/linop/unprec_w12_linop_w.cc, lib/actions/ferm/linop/unprec_w12_linop_w.h, lib/actions/ferm/linop/unprec_wilson_linop_w.cc, lib/actions/ferm/linop/unprec_wilson_linop_w.h, lib/actions/ferm/qprop/asqtad_cps_wrapper_qprop.cc, lib/actions/ferm/qprop/asqtad_cps_wrapper_qprop.h, lib/actions/ferm/qprop/asqtad_qprop.cc, lib/actions/ferm/qprop/asqtad_qprop.h, lib/actions/ferm/qprop/dwf_fermact_qprop_array_w.cc, lib/actions/ferm/qprop/dwf_qpropt_w.h, lib/actions/ferm/qprop/dwf_quarkprop4_w.cc, lib/actions/ferm/qprop/dwf_quarkprop4_w.h, lib/actions/ferm/qprop/fermact_qprop.cc, lib/actions/ferm/qprop/fermact_qprop_array.cc, lib/actions/ferm/qprop/nef_quarkprop4_w.cc, lib/actions/ferm/qprop/nef_quarkprop4_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.h, lib/actions/ferm/qprop/prec_fermact_qprop.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.cc, lib/actions/ferm/qprop/prec_fermact_qprop_array.h, lib/actions/ferm/qprop/prec_staggered_qprop.h, lib/actions/ferm/qprop/qprop.h, lib/actions/ferm/qprop/qprop_w.h, lib/actions/ferm/qprop/quarkprop4_multi_w.cc, lib/actions/ferm/qprop/quarkprop4_multi_w.h, lib/actions/ferm/qprop/quarkprop4_s.cc, lib/actions/ferm/qprop/quarkprop4_s.h, lib/actions/ferm/qprop/quarkprop4_w.cc, lib/actions/ferm/qprop/quarkprop4_w.h, lib/actions/ferm/qprop/staggered_qprop.cc, lib/actions/gauge/gauge.h, lib/actions/gauge/gaugeacts/gauge_createstate_aggregate.cc, lib/actions/gauge/gaugeacts/gauge_createstate_aggregate.h, lib/actions/gauge/gaugeacts/gauge_createstate_factory.h, lib/actions/gauge/gaugeacts/gaugeact_factory.h, lib/actions/gauge/gaugeacts/gaugeacts.h, lib/actions/gauge/gaugeacts/gaugeacts_aggregate.cc, lib/actions/gauge/gaugeacts/gaugeacts_aggregate.h, lib/actions/gauge/gaugeacts/lw_1loop_gaugeact.cc, lib/actions/gauge/gaugeacts/lw_1loop_gaugeact.h, lib/actions/gauge/gaugeacts/lw_tree_gaugeact.cc, lib/actions/gauge/gaugeacts/lw_tree_gaugeact.h, lib/actions/gauge/gaugeacts/pg_gaugeact.cc, lib/actions/gauge/gaugeacts/pg_gaugeact.h, lib/actions/gauge/gaugeacts/plaq_gaugeact.cc, lib/actions/gauge/gaugeacts/plaq_gaugeact.h, lib/actions/gauge/gaugeacts/rbc_gaugeact.cc, lib/actions/gauge/gaugeacts/rbc_gaugeact.h, lib/actions/gauge/gaugeacts/rect_gaugeact.cc, lib/actions/gauge/gaugeacts/rect_gaugeact.h, lib/actions/gauge/gaugeacts/rg_gaugeact.cc, lib/actions/gauge/gaugeacts/rg_gaugeact.h, lib/actions/gauge/gaugeacts/simple_gaugestate.cc, lib/actions/gauge/gaugeacts/simple_gaugestate.h, lib/actions/gauge/gaugeacts/wilson_gaugeact.cc, lib/actions/gauge/gaugeacts/wilson_gaugeact.h, lib/actions/gauge/gaugebcs/gaugebc_aggregate.cc, lib/actions/gauge/gaugebcs/gaugebc_aggregate.h, lib/actions/gauge/gaugebcs/gaugebc_factory.h, lib/actions/gauge/gaugebcs/gaugebcs.h, lib/actions/gauge/gaugebcs/periodic_gaugebc.cc, lib/actions/gauge/gaugebcs/periodic_gaugebc.h, lib/actions/gauge/gaugebcs/schr_chromomag_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_chromomag_gaugebc.h, lib/actions/gauge/gaugebcs/schr_coupling_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_coupling_gaugebc.h, lib/actions/gauge/gaugebcs/schr_dirich_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_dirich_gaugebc.h, lib/actions/gauge/gaugebcs/schr_gaugebc_params.cc, lib/actions/gauge/gaugebcs/schr_gaugebc_params.h, lib/actions/gauge/gaugebcs/schr_nonpert_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_nonpert_gaugebc.h, lib/actions/gauge/gaugebcs/schr_sf_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_sf_gaugebc.h, lib/actions/gauge/gaugebcs/schr_triv_gaugebc.cc, lib/actions/gauge/gaugebcs/schr_triv_gaugebc.h, lib/actions/gauge/gaugebcs/schroedinger_gaugebc.cc, lib/actions/gauge/gaugebcs/schroedinger_gaugebc.h, lib/actions/gauge/gaugebcs/simple_gaugebc.cc, lib/actions/gauge/gaugebcs/simple_gaugebc.h, lib/init/chroma_init.cc, lib/init/chroma_init.h, lib/io/aniso_io.cc, lib/io/aniso_io.h, lib/io/cfgtype_io.cc, lib/io/cfgtype_io.h, lib/io/cppacs_io.cc, lib/io/cppacs_io.h, lib/io/eigen_io.cc, lib/io/eigen_io.h, lib/io/follana_io_s.cc, lib/io/follana_io_s.h, lib/io/gauge_io.cc, lib/io/gauge_io.h, lib/io/hamiltonian_io.cc, lib/io/hamiltonian_io.h, lib/io/inline_io.cc, lib/io/inline_io.h, lib/io/io.h, lib/io/io_s.h, lib/io/io_w.h, lib/io/kyugauge_io.cc, lib/io/kyugauge_io.h, lib/io/kyuqprop_io.cc, lib/io/kyuqprop_io.h, lib/io/milc_io.cc, lib/io/milc_io.h, lib/io/monomial_io.cc, lib/io/monomial_io.h, lib/io/overlap_state_info.cc, lib/io/overlap_state_info.h, lib/io/param_io.cc, lib/io/param_io.h, lib/io/qprop_io.cc, lib/io/qprop_io.h, lib/io/readcppacs.cc, lib/io/readcppacs.h, lib/io/readmilc.cc, lib/io/readmilc.h, lib/io/readszin.cc, lib/io/readszin.h, lib/io/readszinferm_w.cc, lib/io/readszinferm_w.h, lib/io/readszinqprop_w.cc, lib/io/readszinqprop_w.h, lib/io/smearing_io.cc, lib/io/smearing_io.h, lib/io/szin_io.cc, lib/io/szin_io.h, lib/io/writemilc.cc, lib/io/writemilc.h, lib/io/writeszin.cc, lib/io/writeszin.h, lib/io/writeszinqprop_w.cc, lib/io/writeszinqprop_w.h, lib/io/xmllog_io.h, lib/io/enum_io/enum_cfgtype_io.cc, lib/io/enum_io/enum_cfgtype_io.h, lib/io/enum_io/enum_coeffs_io.cc, lib/io/enum_io/enum_coeffs_io.h, lib/io/enum_io/enum_eigenvectype_io.cc, lib/io/enum_io/enum_eigenvectype_io.h, lib/io/enum_io/enum_fermtype_io.cc, lib/io/enum_io/enum_fermtype_io.h, lib/io/enum_io/enum_gaugeacttype_io.cc, lib/io/enum_io/enum_gaugeacttype_io.h, lib/io/enum_io/enum_gaugebc_io.cc, lib/io/enum_io/enum_gaugebc_io.h, lib/io/enum_io/enum_heatbathtype_io.cc, lib/io/enum_io/enum_heatbathtype_io.h, lib/io/enum_io/enum_inner_solver_type_io.cc, lib/io/enum_io/enum_inner_solver_type_io.h, lib/io/enum_io/enum_invtype_io.cc, lib/io/enum_io/enum_invtype_io.h, lib/io/enum_io/enum_io.h, lib/io/enum_io/enum_md_integrator_type_io.cc, lib/io/enum_io/enum_md_integrator_type_io.h, lib/io/enum_io/enum_proptype_io.cc, lib/io/enum_io/enum_proptype_io.h, lib/io/enum_io/enum_qdpvolfmt_io.cc, lib/io/enum_io/enum_qdpvolfmt_io.h, lib/io/enum_io/enum_quarkspintype_io.cc, lib/io/enum_io/enum_quarkspintype_io.h, lib/io/enum_io/enum_simplebctype_io.cc, lib/io/enum_io/enum_simplebctype_io.h, lib/io/enum_io/enum_srcsnktype_io.cc, lib/io/enum_io/enum_srcsnktype_io.h, lib/io/enum_io/enum_stochsrc_io.cc, lib/io/enum_io/enum_stochsrc_io.h, lib/io/enum_io/enum_type_map.h, lib/io/enum_io/enum_wavetype_io.cc, lib/io/enum_io/enum_wavetype_io.h, lib/io/enum_io/enum_wvfkind_io.cc, lib/io/enum_io/enum_wvfkind_io.h, lib/meas/meas.h, lib/meas/eig/eig.h, lib/meas/eig/eig_s.h, lib/meas/eig/eig_spec.cc, lib/meas/eig/eig_spec.h, lib/meas/eig/eig_spec_array.cc, lib/meas/eig/eig_spec_array.h, lib/meas/eig/eig_w.h, lib/meas/eig/gramschm.cc, lib/meas/eig/gramschm.h, lib/meas/eig/gramschm_array.cc, lib/meas/eig/gramschm_array.h, lib/meas/eig/ischiral_w.cc, lib/meas/eig/ischiral_w.h, lib/meas/eig/ritz.cc, lib/meas/eig/ritz.h, lib/meas/eig/ritz_array.cc, lib/meas/eig/ritz_array.h, lib/meas/eig/sn_jacob.cc, lib/meas/eig/sn_jacob.h, lib/meas/eig/sn_jacob_array.cc, lib/meas/eig/sn_jacob_array.h, lib/meas/gfix/axgauge.cc, lib/meas/gfix/axgauge.h, lib/meas/gfix/coulgauge.cc, lib/meas/gfix/coulgauge.h, lib/meas/gfix/gfix.h, lib/meas/gfix/grelax.cc, lib/meas/gfix/grelax.h, lib/meas/gfix/polar_dec.cc, lib/meas/gfix/polar_dec.h, lib/meas/gfix/rot_colvec.cc, lib/meas/gfix/rot_colvec.h, lib/meas/glue/block.cc, lib/meas/glue/cool.cc, lib/meas/glue/fuzwilp.cc, lib/meas/glue/fuzwilp.h, lib/meas/glue/glue.h, lib/meas/glue/gluecor.cc, lib/meas/glue/mesfield.cc, lib/meas/glue/mesfield.h, lib/meas/glue/meslate.cc, lib/meas/glue/mesplq.cc, lib/meas/glue/mesplq.h, lib/meas/glue/mesq.cc, lib/meas/glue/polycor.cc, lib/meas/glue/polylp.cc, lib/meas/glue/polylp.h, lib/meas/glue/qactden.cc, lib/meas/glue/qnaive.cc, lib/meas/glue/qtopcor.cc, lib/meas/glue/topol.cc, lib/meas/glue/wilslp.cc, lib/meas/glue/wilslp.h, lib/meas/hadron/BuildingBlocks_w.cc, lib/meas/hadron/BuildingBlocks_w.h, lib/meas/hadron/D_j_w.cc, lib/meas/hadron/D_j_w.h, lib/meas/hadron/DjDk_w.cc, lib/meas/hadron/DjDk_w.h, lib/meas/hadron/barcomp_w.cc, lib/meas/hadron/barcomp_w.h, lib/meas/hadron/barhqlq_w.cc, lib/meas/hadron/barhqlq_w.h, lib/meas/hadron/barseqsrc_w.cc, lib/meas/hadron/barseqsrc_w.h, lib/meas/hadron/barspinmat_w.cc, lib/meas/hadron/barspinmat_w.h, lib/meas/hadron/baryon_s.cc, lib/meas/hadron/baryon_s.h, lib/meas/hadron/baryon_w.cc, lib/meas/hadron/baryon_w.h, lib/meas/hadron/curcor2_w.cc, lib/meas/hadron/curcor2_w.h, lib/meas/hadron/derivmesonseqsrc_w.cc, lib/meas/hadron/derivmesonseqsrc_w.h, lib/meas/hadron/enum_loops_s.h, lib/meas/hadron/formfac_w.cc, lib/meas/hadron/formfac_w.h, lib/meas/hadron/hadron.h, lib/meas/hadron/hadron_corr_s.h, lib/meas/hadron/hadron_s.h, lib/meas/hadron/hadron_seqsource.cc, lib/meas/hadron/hadron_seqsource.h, lib/meas/hadron/hadron_w.h, lib/meas/hadron/hadseqsrc_w.h, lib/meas/hadron/hybmeson_w.cc, lib/meas/hadron/hybmeson_w.h, lib/meas/hadron/ks_local_loops.cc, lib/meas/hadron/ks_local_loops.h, lib/meas/hadron/loops_s.h, lib/meas/hadron/loops_w.cc, lib/meas/hadron/loops_w.h, lib/meas/hadron/mescomp_w.cc, lib/meas/hadron/mescomp_w.h, lib/meas/hadron/mesons_w.cc, lib/meas/hadron/mesons_w.h, lib/meas/hadron/mesonseqsrc_w.cc, lib/meas/hadron/mesonseqsrc_w.h, lib/meas/hadron/mesphas_follana_s.cc, lib/meas/hadron/mesphas_follana_s.h, lib/meas/hadron/mesphas_s.cc, lib/meas/hadron/mesphas_s.h, lib/meas/hadron/multipole_w.cc, lib/meas/hadron/multipole_w.h, lib/meas/hadron/photon_seqsrc_w.cc, lib/meas/hadron/photon_seqsrc_w.h, lib/meas/hadron/pion_local_s.cc, lib/meas/hadron/pion_local_s.h, lib/meas/hadron/pion_sing_s.cc, lib/meas/hadron/pion_sing_s.h, lib/meas/hadron/pions_s.cc, lib/meas/hadron/pions_s.h, lib/meas/hadron/pseudoscalar_loops_s.cc, lib/meas/hadron/pseudoscalar_loops_s.h, lib/meas/hadron/pseudoscalar_stoch_conn_s.cc, lib/meas/hadron/pseudoscalar_stoch_conn_s.h, lib/meas/hadron/qqbar_w.cc, lib/meas/hadron/qqbar_w.h, lib/meas/hadron/qqq_w.cc, lib/meas/hadron/qqq_w.h, lib/meas/hadron/scalar_loops_s.cc, lib/meas/hadron/scalar_loops_s.h, lib/meas/hadron/seqpiontest_w.cc, lib/meas/hadron/seqpiontest_w.h, lib/meas/hadron/seqsource_aggregate_w.cc, lib/meas/hadron/seqsource_aggregate_w.h, lib/meas/hadron/seqsource_factory_w.h, lib/meas/hadron/stag_propShift_s.cc, lib/meas/hadron/stag_propShift_s.h, lib/meas/hadron/stag_scalars_s.cc, lib/meas/hadron/stag_scalars_s.h, lib/meas/hadron/stoch_conn_s.h, lib/meas/hadron/stoch_var.cc, lib/meas/hadron/stoch_var.h, lib/meas/hadron/vector_meson_s.cc, lib/meas/hadron/vector_meson_s.h, lib/meas/hadron/wall_qprop_w.cc, lib/meas/hadron/wall_qprop_w.h, lib/meas/hadron/walldeltaff_w.cc, lib/meas/hadron/walldeltaff_w.h, lib/meas/hadron/walldeltapff_w.cc, lib/meas/hadron/walldeltapff_w.h, lib/meas/hadron/wallff_w.cc, lib/meas/hadron/wallff_w.h, lib/meas/hadron/wallnuclff_w.cc, lib/meas/hadron/wallnuclff_w.h, lib/meas/hadron/wallpionff_w.cc, lib/meas/hadron/wallpionff_w.h, lib/meas/hadron/wallrhoff_w.cc, lib/meas/hadron/wallrhoff_w.h, lib/meas/hadron/wallrhopiff_w.cc, lib/meas/hadron/wallrhopiff_w.h, lib/meas/inline/abs_inline_measurement.h, lib/meas/inline/abs_inline_measurement_factory.h, lib/meas/inline/inline.h, lib/meas/inline/inline_aggregate.cc, lib/meas/inline/inline_aggregate.h, lib/meas/inline/make_xml_file.cc, lib/meas/inline/make_xml_file.h, lib/meas/inline/eig/eig.h, lib/meas/inline/eig/inline_eig_aggregate.cc, lib/meas/inline/eig/inline_eig_aggregate.h, lib/meas/inline/eig/inline_eigbnds.cc, lib/meas/inline/eig/inline_eigbnds.h, lib/meas/inline/eig/inline_ritz_H_w.cc, lib/meas/inline/eig/inline_ritz_H_w.h, lib/meas/inline/gfix/gfix.h, lib/meas/inline/gfix/inline_coulgauge.cc, lib/meas/inline/gfix/inline_coulgauge.h, lib/meas/inline/gfix/inline_gfix_aggregate.cc, lib/meas/inline/gfix/inline_gfix_aggregate.h, lib/meas/inline/glue/glue.h, lib/meas/inline/glue/inline_fuzwilp.cc, lib/meas/inline/glue/inline_fuzwilp.h, lib/meas/inline/glue/inline_glue_aggregate.cc, lib/meas/inline/glue/inline_glue_aggregate.h, lib/meas/inline/glue/inline_plaquette.cc, lib/meas/inline/glue/inline_plaquette.h, lib/meas/inline/glue/inline_polylp.cc, lib/meas/inline/glue/inline_polylp.h, lib/meas/inline/glue/inline_wilslp.cc, lib/meas/inline/glue/inline_wilslp.h, lib/meas/inline/hadron/hadron.h, lib/meas/inline/hadron/inline_bar3ptfn_w.cc, lib/meas/inline/hadron/inline_bar3ptfn_w.h, lib/meas/inline/hadron/inline_building_blocks_w.cc, lib/meas/inline/hadron/inline_building_blocks_w.h, lib/meas/inline/hadron/inline_hadron_aggregate.cc, lib/meas/inline/hadron/inline_hadron_aggregate.h, lib/meas/inline/hadron/inline_hadspec_w.cc, lib/meas/inline/hadron/inline_hadspec_w.h, lib/meas/inline/hadron/inline_make_source_ferm_w.cc, lib/meas/inline/hadron/inline_make_source_ferm_w.h, lib/meas/inline/hadron/inline_make_source_w.cc, lib/meas/inline/hadron/inline_make_source_w.h, lib/meas/inline/hadron/inline_mesonspec_w.cc, lib/meas/inline/hadron/inline_mesonspec_w.h, lib/meas/inline/hadron/inline_mres_w.cc, lib/meas/inline/hadron/inline_mres_w.h, lib/meas/inline/hadron/inline_multi_propagator_w.cc, lib/meas/inline/hadron/inline_multi_propagator_w.h, lib/meas/inline/hadron/inline_multipole_w.cc, lib/meas/inline/hadron/inline_multipole_w.h, lib/meas/inline/hadron/inline_noisy_building_blocks_w.cc, lib/meas/inline/hadron/inline_noisy_building_blocks_w.h, lib/meas/inline/hadron/inline_propagator_ferm_w.cc, lib/meas/inline/hadron/inline_propagator_ferm_w.h, lib/meas/inline/hadron/inline_propagator_w.cc, lib/meas/inline/hadron/inline_propagator_w.h, lib/meas/inline/hadron/inline_qpropadd_w.cc, lib/meas/inline/hadron/inline_qpropadd_w.h, lib/meas/inline/hadron/inline_qpropqio_w.cc, lib/meas/inline/hadron/inline_qpropqio_w.h, lib/meas/inline/hadron/inline_qqbar_w.cc, lib/meas/inline/hadron/inline_qqbar_w.h, lib/meas/inline/hadron/inline_qqqNucNuc_w.cc, lib/meas/inline/hadron/inline_qqqNucNuc_w.h, lib/meas/inline/hadron/inline_qqq_w.cc, lib/meas/inline/hadron/inline_qqq_w.h, lib/meas/inline/hadron/inline_seqsource_w.cc, lib/meas/inline/hadron/inline_seqsource_w.h, lib/meas/inline/hadron/inline_sink_smear_w.cc, lib/meas/inline/hadron/inline_sink_smear_w.h, lib/meas/inline/hadron/inline_spectrumOct_w.cc, lib/meas/inline/hadron/inline_spectrumOct_w.h, lib/meas/inline/hadron/inline_spectrum_w.cc, lib/meas/inline/hadron/inline_spectrum_w.h, lib/meas/inline/hadron_s/hadron_s.h, lib/meas/inline/hadron_s/inline_hadron_aggregate_s.cc, lib/meas/inline/hadron_s/inline_hadron_aggregate_s.h, lib/meas/inline/hadron_s/inline_spectrum_s.cc, lib/meas/inline/hadron_s/inline_spectrum_s.h, lib/meas/inline/hadron_s/util_baryon_s.cc, lib/meas/inline/hadron_s/util_compute_8_pions_s.cc, lib/meas/inline/hadron_s/util_compute_8_scalars_s.cc, lib/meas/inline/hadron_s/util_compute_8_vectors_s.cc, lib/meas/inline/hadron_s/util_compute_meson_s.cc, lib/meas/inline/hadron_s/util_compute_meson_s.h, lib/meas/inline/hadron_s/util_compute_quark_prop_s.cc, lib/meas/inline/hadron_s/util_compute_quark_prop_s.h, lib/meas/inline/hadron_s/util_compute_singlet_ps.cc, lib/meas/inline/io/default_gauge_field.cc, lib/meas/inline/io/default_gauge_field.h, lib/meas/inline/io/inline_erase_obj.cc, lib/meas/inline/io/inline_erase_obj.h, lib/meas/inline/io/inline_gaussian_obj.cc, lib/meas/inline/io/inline_gaussian_obj.h, lib/meas/inline/io/inline_io_aggregate.cc, lib/meas/inline/io/inline_io_aggregate.h, lib/meas/inline/io/inline_list_obj.cc, lib/meas/inline/io/inline_list_obj.h, lib/meas/inline/io/inline_nersc_write_obj.cc, lib/meas/inline/io/inline_nersc_write_obj.h, lib/meas/inline/io/inline_qio_read_obj.cc, lib/meas/inline/io/inline_qio_read_obj.h, lib/meas/inline/io/inline_qio_write_erase_obj.cc, lib/meas/inline/io/inline_qio_write_erase_obj.h, lib/meas/inline/io/inline_qio_write_obj.cc, lib/meas/inline/io/inline_qio_write_obj.h, lib/meas/inline/io/inline_snarf_obj.cc, lib/meas/inline/io/inline_snarf_obj.h, lib/meas/inline/io/inline_szin_read_obj.cc, lib/meas/inline/io/inline_szin_read_obj.h, lib/meas/inline/io/inline_szin_write_obj.cc, lib/meas/inline/io/inline_szin_write_obj.h, lib/meas/inline/io/inline_xml_write_obj.cc, lib/meas/inline/io/inline_xml_write_obj.h, lib/meas/inline/io/io.h, lib/meas/inline/io/named_objmap.h, lib/meas/inline/io/qio_read_obj_funcmap.cc, lib/meas/inline/io/qio_read_obj_funcmap.h, lib/meas/inline/io/qio_write_obj_funcmap.cc, lib/meas/inline/io/qio_write_obj_funcmap.h, lib/meas/inline/io/szin_read_obj_funcmap.cc, lib/meas/inline/io/szin_read_obj_funcmap.h, lib/meas/inline/io/szin_write_obj_funcmap.cc, lib/meas/inline/io/szin_write_obj_funcmap.h, lib/meas/inline/io/xml_write_obj_funcmap.cc, lib/meas/inline/io/xml_write_obj_funcmap.h, lib/meas/inline/smear/inline_ape_smear.cc, lib/meas/inline/smear/inline_ape_smear.h, lib/meas/inline/smear/inline_hyp_smear.cc, lib/meas/inline/smear/inline_hyp_smear.h, lib/meas/inline/smear/inline_link_smear.cc, lib/meas/inline/smear/inline_link_smear.h, lib/meas/inline/smear/inline_smear_aggregate.cc, lib/meas/inline/smear/inline_smear_aggregate.h, lib/meas/inline/smear/inline_stout_smear.cc, lib/meas/inline/smear/inline_stout_smear.h, lib/meas/inline/smear/smear.h, lib/meas/pbp/mespbg5p_w.cc, lib/meas/pbp/mespbp_s.cc, lib/meas/pbp/mespbp_w.cc, lib/meas/pbp/ovpbg5p_w.cc, lib/meas/pbp/pbg5p_w.cc, lib/meas/pbp/pbp.h, lib/meas/pbp/stagpbp_s.cc, lib/meas/schrfun/schrfun.h, lib/meas/schrfun/sfcurcor_w.cc, lib/meas/schrfun/sfpcac_w.cc, lib/meas/sinks/pt_sink_smearing.cc, lib/meas/sinks/pt_sink_smearing.h, lib/meas/sinks/sh_sink_smearing.cc, lib/meas/sinks/sh_sink_smearing.h, lib/meas/sinks/sink_smearing_aggregate.cc, lib/meas/sinks/sink_smearing_aggregate.h, lib/meas/sinks/sink_smearing_factory.h, lib/meas/sinks/sinks.h, lib/meas/smear/ape_link_smearing.cc, lib/meas/smear/ape_link_smearing.h, lib/meas/smear/ape_smear.cc, lib/meas/smear/ape_smear.h, lib/meas/smear/deriv_quark_displacement_w.cc, lib/meas/smear/deriv_quark_displacement_w.h, lib/meas/smear/displacement.cc, lib/meas/smear/displacement.h, lib/meas/smear/fuzz_smear.cc, lib/meas/smear/fuzz_smear.h, lib/meas/smear/gaus_quark_smearing.cc, lib/meas/smear/gaus_quark_smearing.h, lib/meas/smear/gaus_smear.cc, lib/meas/smear/gaus_smear.h, lib/meas/smear/hyp_link_smearing.cc, lib/meas/smear/hyp_link_smearing.h, lib/meas/smear/hyp_smear.cc, lib/meas/smear/hyp_smear.h, lib/meas/smear/hyp_smear3d.cc, lib/meas/smear/hyp_smear3d.h, lib/meas/smear/jacobi_smear.cc, lib/meas/smear/laplacian.cc, lib/meas/smear/laplacian.h, lib/meas/smear/link_smearing.h, lib/meas/smear/link_smearing_aggregate.cc, lib/meas/smear/link_smearing_aggregate.h, lib/meas/smear/link_smearing_factory.cc, lib/meas/smear/link_smearing_factory.h, lib/meas/smear/no_quark_displacement.cc, lib/meas/smear/no_quark_displacement.h, lib/meas/smear/quark_displacement.h, lib/meas/smear/quark_displacement_aggregate.cc, lib/meas/smear/quark_displacement_aggregate.h, lib/meas/smear/quark_displacement_factory.h, lib/meas/smear/quark_smearing.h, lib/meas/smear/quark_smearing_aggregate.cc, lib/meas/smear/quark_smearing_aggregate.h, lib/meas/smear/quark_smearing_factory.h, lib/meas/smear/quark_source_sink.h, lib/meas/smear/simple_quark_displacement.cc, lib/meas/smear/simple_quark_displacement.h, lib/meas/smear/sink_smear2.cc, lib/meas/smear/sink_smear2.h, lib/meas/smear/smear.h, lib/meas/smear/stout_link_smearing.cc, lib/meas/smear/stout_link_smearing.h, lib/meas/smear/stout_smear.cc, lib/meas/smear/stout_smear.h, lib/meas/smear/wupp_smear.cc, lib/meas/smear/wvfkind.h, lib/meas/sources/d_src_w.cc, lib/meas/sources/d_src_w.h, lib/meas/sources/dilute_gauss_src_s.cc, lib/meas/sources/dilute_gauss_src_s.h, lib/meas/sources/dilutezN_source_const.cc, lib/meas/sources/dilutezN_source_const.h, lib/meas/sources/maksrc2_w.cc, lib/meas/sources/p_src_w.cc, lib/meas/sources/p_src_w.h, lib/meas/sources/partwall_source_const.cc, lib/meas/sources/partwall_source_const.h, lib/meas/sources/pt_source_const.cc, lib/meas/sources/pt_source_const.h, lib/meas/sources/pt_source_smearing.cc, lib/meas/sources/pt_source_smearing.h, lib/meas/sources/rndz2wall_source_const.cc, lib/meas/sources/rndz2wall_source_const.h, lib/meas/sources/sh_source_const.cc, lib/meas/sources/sh_source_const.h, lib/meas/sources/sh_source_smearing.cc, lib/meas/sources/sh_source_smearing.h, lib/meas/sources/source_const_aggregate.cc, lib/meas/sources/source_const_aggregate.h, lib/meas/sources/source_const_factory.h, lib/meas/sources/source_construction.h, lib/meas/sources/source_smearing_aggregate.cc, lib/meas/sources/source_smearing_aggregate.h, lib/meas/sources/source_smearing_factory.h, lib/meas/sources/sources.h, lib/meas/sources/sources_s.h, lib/meas/sources/sources_w.h, lib/meas/sources/srcfil.cc, lib/meas/sources/srcfil.h, lib/meas/sources/srcsnktype.h, lib/meas/sources/walfil_s.cc, lib/meas/sources/walfil_s.h, lib/meas/sources/walfil_w.cc, lib/meas/sources/walfil_w.h, lib/meas/sources/wall_source_const.cc, lib/meas/sources/wall_source_const.h, lib/meas/sources/wavetype.h, lib/meas/sources/z2_src.cc, lib/meas/sources/z2_src.h, lib/meas/sources/zN_src.cc, lib/meas/sources/zN_src.h, lib/meas/trln/pade_trln_w.cc, lib/meas/trln/trln.h, lib/update/update.h, lib/update/heatbath/hb_params.h, lib/update/heatbath/heatbath.h, lib/update/heatbath/mciter.cc, lib/update/heatbath/mciter.h, lib/update/heatbath/mciter32.cc, lib/update/heatbath/mciter32.h, lib/update/heatbath/monte.cc, lib/update/heatbath/monte.h, lib/update/heatbath/su2_hb_update.cc, lib/update/heatbath/su2_hb_update.h, lib/update/heatbath/su3_hb_sweep.cc, lib/update/heatbath/su3_hb_sweep.h, lib/update/heatbath/su3hb.cc, lib/update/heatbath/su3hb.h, lib/update/heatbath/su3over.cc, lib/update/heatbath/su3over.h, lib/update/heatbath/u_staple.cc, lib/update/heatbath/u_staple.h, lib/update/molecdyn/field_state.h, lib/update/molecdyn/molecdyn.h, lib/update/molecdyn/hamiltonian/abs_hamiltonian.h, lib/update/molecdyn/hamiltonian/exact_hamiltonian.h, lib/update/molecdyn/hamiltonian/hamiltonian.h, lib/update/molecdyn/hmc/abs_hmc.h, lib/update/molecdyn/hmc/global_metropolis_accrej.cc, lib/update/molecdyn/hmc/global_metropolis_accrej.h, lib/update/molecdyn/hmc/hmc.h, lib/update/molecdyn/hmc/lcm_hmc.h, lib/update/molecdyn/integrator/abs_integrator.h, lib/update/molecdyn/integrator/integrator.h, lib/update/molecdyn/integrator/integrator_aggregate.cc, lib/update/molecdyn/integrator/integrator_aggregate.h, lib/update/molecdyn/integrator/lcm_integrator_leaps.cc, lib/update/molecdyn/integrator/lcm_integrator_leaps.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.h, lib/update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.cc, lib/update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.h, lib/update/molecdyn/integrator/lcm_pqp_leapfrog.cc, lib/update/molecdyn/integrator/lcm_pqp_leapfrog.h, lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.cc, lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.h, lib/update/molecdyn/integrator/lcm_sexton_weingarten.cc, lib/update/molecdyn/integrator/lcm_sexton_weingarten.h, lib/update/molecdyn/integrator/lcm_sw_min_mixed.cc, lib/update/molecdyn/integrator/lcm_sw_min_mixed.h, lib/update/molecdyn/integrator/md_integrator_factory.h, lib/update/molecdyn/monomial/abs_monomial.h, lib/update/molecdyn/monomial/gauge_monomial.cc, lib/update/molecdyn/monomial/gauge_monomial.h, lib/update/molecdyn/monomial/genapprox.cc, lib/update/molecdyn/monomial/genapprox.h, lib/update/molecdyn/monomial/monomial.h, lib/update/molecdyn/monomial/monomial_aggregate_w.cc, lib/update/molecdyn/monomial/monomial_aggregate_w.h, lib/update/molecdyn/monomial/monomial_factory.h, lib/update/molecdyn/monomial/monomial_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_params_w.cc, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_params_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial_params_w.cc, lib/update/molecdyn/monomial/one_flavor_rat_monomial_params_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.cc, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/prec_logdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_params_w.cc, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_params_w.h, lib/update/molecdyn/monomial/two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/two_flavor_monomial_params_w.cc, lib/update/molecdyn/monomial/two_flavor_monomial_params_w.h, lib/update/molecdyn/monomial/two_flavor_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polynomial_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_polyprec_monomial_w.h, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.cc, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.cc, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.cc, lib/update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.cc, lib/update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.h, lib/update/molecdyn/monomial/unprec_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/unprec_two_flavor_monomial_w.h, lib/update/molecdyn/old/clovdsduf_w.cc, lib/update/molecdyn/old/dsdu.cc, lib/update/molecdyn/old/dsduf_s.cc, lib/update/molecdyn/old/dsduf_w.cc, lib/update/molecdyn/old/hamilton.h, lib/update/molecdyn/old/hybrid.cc, lib/update/molecdyn/old/hybrid.h, lib/update/molecdyn/old/molecdyn.h, lib/update/molecdyn/old/ovdsduf_w.cc, lib/update/molecdyn/old/polydsduf_s.cc, lib/update/molecdyn/old/polydsduf_w.cc, lib/update/molecdyn/old/ratdsduf_s.cc, lib/update/molecdyn/old/ratdsduf_w.cc, lib/update/molecdyn/old/stdsduf_s.cc, lib/update/molecdyn/old/triacntr_w.cc, lib/update/molecdyn/old/wils_hamsys_w.h, lib/update/molecdyn/old/wldsduf_w.cc, lib/update/molecdyn/old/wlhdsduf_w.cc, lib/update/molecdyn/old/mese/clmesferm_w.cc, lib/update/molecdyn/old/mese/mese.cc, lib/update/molecdyn/old/mese/mesferm_w.cc, lib/update/molecdyn/old/mese/mesmom.cc, lib/update/molecdyn/old/mese/ratmesferm_s.cc, lib/update/molecdyn/old/mese/ratmesferm_w.cc, lib/update/molecdyn/old/mese/wlmesferm_w.cc, lib/update/molecdyn/old/noise/frmnse_w.cc, lib/update/molecdyn/old/noise/polyfrmnse_s.cc, lib/update/molecdyn/old/noise/polyfrmnse_w.cc, lib/update/molecdyn/old/noise/ratfrmnse_s.cc, lib/update/molecdyn/old/noise/ratfrmnse_w.cc, lib/update/molecdyn/old/noise/wlfrmnse_w.cc, lib/update/molecdyn/old/step/camptrj.cc, lib/update/molecdyn/old/step/endoftrj.cc, lib/update/molecdyn/old/step/hybtrj.cc, lib/update/molecdyn/old/step/interpol.cc, lib/update/molecdyn/old/step/leapp.cc, lib/update/molecdyn/old/step/leappmx.cc, lib/update/molecdyn/old/step/leapu.cc, lib/update/molecdyn/old/step/refrsh.cc, lib/update/molecdyn/old/step/rhybtrj.cc, lib/update/molecdyn/predictor/chrono_predictor.h, lib/update/molecdyn/predictor/chrono_predictor_factory.h, lib/update/molecdyn/predictor/circular_buffer.h, lib/update/molecdyn/predictor/last_solution_predictor.cc, lib/update/molecdyn/predictor/last_solution_predictor.h, lib/update/molecdyn/predictor/linear_extrap_predictor.cc, lib/update/molecdyn/predictor/linear_extrap_predictor.h, lib/update/molecdyn/predictor/lu_solve.cc, lib/update/molecdyn/predictor/lu_solve.h, lib/update/molecdyn/predictor/mre_extrap_predictor.cc, lib/update/molecdyn/predictor/mre_extrap_predictor.h, lib/update/molecdyn/predictor/predictor.h, lib/update/molecdyn/predictor/predictor_aggregate.cc, lib/update/molecdyn/predictor/predictor_aggregate.h, lib/update/molecdyn/predictor/zero_guess_predictor.cc, lib/update/molecdyn/predictor/zero_guess_predictor.h, lib/util/util.h, lib/util/ferm/antisymtensor.cc, lib/util/ferm/antisymtensor.h, lib/util/ferm/diractodr.cc, lib/util/ferm/diractodr.h, lib/util/ferm/eigeninfo.h, lib/util/ferm/etensor.cc, lib/util/ferm/etensor.h, lib/util/ferm/ferm.h, lib/util/ferm/ferm_s.h, lib/util/ferm/ferm_w.h, lib/util/ferm/gammasgn_w.cc, lib/util/ferm/gammasgn_w.h, lib/util/ferm/paulitodr.cc, lib/util/ferm/paulitodr.h, lib/util/ferm/symtensor.cc, lib/util/ferm/symtensor.h, lib/util/ferm/tdiractodr.cc, lib/util/ferm/tdiractodr.h, lib/util/ferm/transf.cc, lib/util/ferm/transf.h, lib/util/ft/ft.h, lib/util/ft/sftmom.cc, lib/util/ft/sftmom.h, lib/util/gauge/conjgauge.cc, lib/util/gauge/conjgauge.h, lib/util/gauge/constgauge.cc, lib/util/gauge/constgauge.h, lib/util/gauge/eesu2.cc, lib/util/gauge/eesu2.h, lib/util/gauge/eesu3.cc, lib/util/gauge/eesu3.h, lib/util/gauge/eeu1.cc, lib/util/gauge/eeu1.h, lib/util/gauge/expm12.cc, lib/util/gauge/expm12.h, lib/util/gauge/expmat.cc, lib/util/gauge/expmat.h, lib/util/gauge/expsu3.cc, lib/util/gauge/expsu3.h, lib/util/gauge/gauge.h, lib/util/gauge/gauge_s.h, lib/util/gauge/gauge_startup.cc, lib/util/gauge/gauge_startup.h, lib/util/gauge/hotst.cc, lib/util/gauge/hotst.h, lib/util/gauge/reunit.cc, lib/util/gauge/reunit.h, lib/util/gauge/rgauge.cc, lib/util/gauge/rgauge.h, lib/util/gauge/stag_phases_s.cc, lib/util/gauge/stag_phases_s.h, lib/util/gauge/su2extract.cc, lib/util/gauge/su2extract.h, lib/util/gauge/su3proj.cc, lib/util/gauge/su3proj.h, lib/util/gauge/sun_proj.cc, lib/util/gauge/sun_proj.h, lib/util/gauge/sunfill.cc, lib/util/gauge/sunfill.h, lib/util/gauge/taproj.cc, lib/util/gauge/taproj.h, lib/util/gauge/unit_check.cc, lib/util/gauge/unit_check.h, lib/util/gauge/weak_field.cc, lib/util/gauge/weak_field.h, lib/util/info/info.h, lib/util/info/printgeom.cc, lib/util/info/printgeom.h, lib/util/info/proginfo.cc, lib/util/info/proginfo.h, mainprogs/Makefile.am, mainprogs/mainprogs.h, mainprogs/main/ExampleBuildingBlocks.cc, mainprogs/main/Makefile.am, mainprogs/main/cfgtransf.cc, mainprogs/main/chroma.cc, mainprogs/main/collect_multi_propcomp.cc, mainprogs/main/collect_propcomp.cc, mainprogs/main/hmc.cc, mainprogs/main/main.h, mainprogs/main/make_seeds.cc, mainprogs/main/multi_propagator_comp.cc, mainprogs/main/propagator_comp.cc, mainprogs/main/purgaug.cc, mainprogs/main/qpropadd.cc, mainprogs/main/qpropgfix.cc, mainprogs/main/qpropqio.cc, mainprogs/main/qproptransf.cc, mainprogs/main/qproptrev.cc, mainprogs/main/spectrum_s.cc, mainprogs/main/stoch_meson.cc, mainprogs/main/wallformfac.cc, mainprogs/tests/INPUT_W.xml, mainprogs/tests/INPUT_t_propagator_twisted.xml, mainprogs/tests/Makefile.am, mainprogs/tests/invcg2_prec_wilson.cc, mainprogs/tests/invcg2_prec_wilson.h, mainprogs/tests/invcg2_timing_hacks_2.cc, mainprogs/tests/invcg2_timing_hacks_2.h, mainprogs/tests/invcg2_timing_hacks_3.cc, mainprogs/tests/invcg2_timing_hacks_3.h, mainprogs/tests/t_ape_smear.cc, mainprogs/tests/t_bicgstab.cc, mainprogs/tests/t_circular_buffer.cc, mainprogs/tests/t_conslinop.cc, mainprogs/tests/t_disc_loop_s.cc, mainprogs/tests/t_dslashm.cc, mainprogs/tests/t_dwf4d.cc, mainprogs/tests/t_dwflinop.cc, mainprogs/tests/t_dwflocality.cc, mainprogs/tests/t_fermion_loop_w.cc, mainprogs/tests/t_follana_io_s.cc, mainprogs/tests/t_follana_pion_s.cc, mainprogs/tests/t_formfac.cc, mainprogs/tests/t_fuzwilp.cc, mainprogs/tests/t_fuzwilp.out.test, mainprogs/tests/t_g5eps_bj.cc, mainprogs/tests/t_gauge_force.cc, mainprogs/tests/t_gfix.cc, mainprogs/tests/t_hamiltonian.cc, mainprogs/tests/t_hamsys.cc, mainprogs/tests/t_hamsys_ferm.cc, mainprogs/tests/t_hmc_pg.cc, mainprogs/tests/t_hypsmear.cc, mainprogs/tests/t_invborici.cc, mainprogs/tests/t_invert3_precwilson.cc, mainprogs/tests/t_invert4_precwilson.cc, mainprogs/tests/t_invrelcg.cc, mainprogs/tests/t_io.cc, mainprogs/tests/t_leapfrog.cc, mainprogs/tests/t_lower_tests.cc, mainprogs/tests/t_lwldslash.cc, mainprogs/tests/t_lwldslash_array.cc, mainprogs/tests/t_lwldslash_pab.cc, mainprogs/tests/t_lwldslash_sse.cc, mainprogs/tests/t_mesons_w.cc, mainprogs/tests/t_mesplq.cc, mainprogs/tests/t_mres_4d.cc, mainprogs/tests/t_msumr.cc, mainprogs/tests/t_neflinop.cc, mainprogs/tests/t_ov_pbp.cc, mainprogs/tests/t_overbu.cc, mainprogs/tests/t_ovlap5d_bj.cc, mainprogs/tests/t_ovlap_bj.cc, mainprogs/tests/t_ovlap_double_pass.cc, mainprogs/tests/t_prec_contfrac.cc, mainprogs/tests/t_prec_nef.cc, mainprogs/tests/t_prec_twoflav_wilson_monomial.cc, 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tests/propagator_comp/propagator_comp_zolo5_c1.xml.ini, tests/propagator_comp/propagator_comp_zolo5_c2.linux-scalar-intel.xml, tests/propagator_comp/propagator_comp_zolo5_c2.xml.ini, tests/propagator_comp/propagator_comp_zolo5_szinev_c0.xml.ini, tests/propagator_comp/run_zolo4.sh, tests/propagator_comp/run_zolo5.sh, tests/propagator_w/INPUT_W.xml, tests/propagator_w/t_propagator_w.xml, tests/propagator_w/t_propagator_w_METRIC.xml, tests/purgaug/purgaug.ini.xml, tests/purgaug/purgaug.metric.xml, tests/purgaug/purgaug.out.xml, tests/purgaug/regres.pl, tests/purgaug/w_plaq.xsl, tests/qpropadd/qpropadd_v1.xml.ini, tests/qpropgfix/qpropgfix_v1.linux-scalar-intel.xml, tests/qpropgfix/qpropgfix_v1.xml.ini, tests/qproptransf/prop.xml.ini, tests/qproptransf/prop_milc_102.xml.ini, tests/qproptransf/qtransf_seqprop_v1.xml.ini, tests/qproptransf/qtransf_seqprop_v2.linux-scalar-intel.xml, tests/qproptransf/qtransf_seqprop_v2.xml.ini, tests/qproptransf/seqprop.xml.ini, tests/qproptransf/seqsrc.xml.ini, tests/qproptransf/seqsrc_milc_102.xml.ini, tests/qproptrev/qproptrev_v1.xml.ini, tests/spectrum_s/regres.pl, tests/spectrum_s/spectrum_s.metric.xml, tests/spectrum_s/spectrum_s.xml, tests/spectrum_s/spectrum_s_reg.xml, tests/spectrum_s/spectrum_s_reg_test_output.xml, tests/spectrum_s/spectrum_s_test_output.xml, tests/stoch_meson/create_chroma_xml.csh, tests/stoch_meson/create_chroma_xml_eo.csh, tests/stoch_meson/stoch_meson.eo.ini.xml, tests/stoch_meson/stoch_meson.ini.xml, tests/stoch_meson/stoch_meson.out.xml, tests/t_ape_smear/t_ape_smear.linux-scalar-intel.xml, tests/t_asqtad_prop/DATA, tests/t_asqtad_prop/DATA_v2, tests/t_asqtad_prop/DISC_DATA_v2, tests/t_asqtad_prop/DISC_XMLDAT.reference, tests/t_asqtad_prop/INPUT_t_propagator_fuzz_s, tests/t_asqtad_prop/XMLDAT.reference, tests/t_asqtad_prop/t_disc_loop_s.xml, tests/t_asqtad_prop/t_disc_loop_s_METRIC.xml, tests/t_asqtad_prop/t_nersc.cfg, tests/t_asqtad_prop/t_propagator_fuzz_s.xml, tests/t_asqtad_prop/t_propagator_fuzz_s_METRIC.xml, tests/t_asqtad_prop/t_propagator_s.xml, tests/t_asqtad_prop/t_propagator_s_METRIC.xml, tests/t_dwf4d/t_dwf4d.xml.ini, tests/t_dwf4d/t_dwf4d_ovdwf_v1.linux-scalar-intel.xml, tests/t_dwf4d/t_dwf4d_ovdwf_v1.xml.ini, tests/t_g5eps_bj/t_g5eps_bj.xml.ini, tests/t_gmresr/t_rel_gmresr.xml.ini, tests/t_hamiltonian/t_hamiltonian.xml.ini, tests/t_leapfrog/regres.pl, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.ini.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.metric.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.out.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.ini.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.metric.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.out.xml, tests/t_leapfrog/t_leapfrog.parwilson_minimal_norm_2nd_qpq_integrator_mts.ini.xml, tests/t_leapfrog/t_leapfrog.parwilson_pqp_integrator_mts.ini.xml, tests/t_leapfrog/t_leapfrog.parwilson_pqp_integrator_mts.metric.xml, tests/t_leapfrog/t_leapfrog.parwilson_pqp_integrator_mts.out.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_dwf.ini.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_dwf.metric.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_dwf.out.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_wilson.ini.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_wilson.metric.xml, tests/t_leapfrog/t_leapfrog.prec_1flav_wilson.out.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.ini.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.metric.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover.out.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.ini.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.metric.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.out.xml, tests/t_leapfrog/t_leapfrog.prec_contfrac.ini.xml, tests/t_leapfrog/t_leapfrog.prec_contfrac.metric.xml, tests/t_leapfrog/t_leapfrog.prec_contfrac.out.xml, tests/t_leapfrog/t_leapfrog.prec_dwf.ini.xml, tests/t_leapfrog/t_leapfrog.prec_dwf.metric.xml, tests/t_leapfrog/t_leapfrog.prec_dwf.out.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch_wilson.ini.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch_wilson.metric.xml, tests/t_leapfrog/t_leapfrog.prec_hasenbusch_wilson.out.xml, tests/t_leapfrog/t_leapfrog.prec_parwilson.ini.xml, tests/t_leapfrog/t_leapfrog.prec_parwilson.metric.xml, tests/t_leapfrog/t_leapfrog.prec_parwilson.out.xml, tests/t_leapfrog/t_leapfrog.prec_polynomial_wilson.ini.xml, tests/t_leapfrog/t_leapfrog.prec_wilson.ini.xml, tests/t_leapfrog/t_leapfrog.prec_wilson.metric.xml, tests/t_leapfrog/t_leapfrog.prec_wilson.out.xml, tests/t_leapfrog/t_leapfrog.unprec_clover.ini.xml, tests/t_leapfrog/t_leapfrog.unprec_clover.metric.xml, tests/t_leapfrog/t_leapfrog.unprec_clover.out.xml, tests/t_leapfrog/t_leapfrog.unprec_dwf.ini.xml, tests/t_leapfrog/t_leapfrog.unprec_dwf.metric.xml, tests/t_leapfrog/t_leapfrog.unprec_dwf.out.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.ini.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.metric.xml, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.out.xml, tests/t_leapfrog/t_leapfrog.unprec_wilson.ini.xml, tests/t_leapfrog/t_leapfrog.unprec_wilson.metric.xml, tests/t_leapfrog/t_leapfrog.unprec_wilson.out.xml, tests/t_lwldslash_sse/input.xml, tests/t_lwldslash_sse/t_lwldslash_array_input.xml, tests/t_msumr/t_msumr.xml.ini, tests/t_msumr/t_msumr.xml.linux-scalar-intel, tests/t_ov_pbp/DATA, tests/t_ov_pbp/README, tests/t_ovlap5d_bj/DATA.ini, tests/t_ovlap5d_bj/t_ovlap5d.xml.out, tests/t_ovlap_bj/DATA, tests/t_ovlap_bj/eigenvector.xml, tests/t_ovlap_bj/eigenvector_000, tests/t_ovlap_bj/eigenvector_001, tests/t_ovlap_bj/eigenvector_002, tests/t_ovlap_bj/eigenvector_003, tests/t_ovlap_bj/eigenvector_004, tests/t_ovlap_bj/eigenvector_005, tests/t_ovlap_bj/eigenvector_006, tests/t_ovlap_bj/eigenvector_007, tests/t_ovlap_bj/eigenvector_008, tests/t_ovlap_bj/eigenvector_009, tests/t_ovlap_bj/eigenvector_010, tests/t_ovlap_bj/eigenvector_011, tests/t_ovlap_bj/t_ovlap.xml, tests/t_prec_contfrac/t_prec_contfrac.xml.ini, tests/t_precact/t_prec_nef.xml.ini, tests/t_precact/t_precact.clover.ini.xml, tests/t_precact/t_precact.prec_contfrac.xml.ini, tests/t_precact/t_precact.prec_dwf.xml.ini, tests/t_precact/t_precact.prec_ht_contfrac.xml.ini, tests/t_precact/t_precact.prec_zolo_nef.xml.ini, tests/t_ritz/DATA_rest_read, tests/t_ritz/README, tests/t_ritz/t_ritz.xml.in, tests/t_ritz/t_ritz.xml.out, tests/t_ritz/t_ritz5d_KS.xml.in, tests/t_ritz/t_ritz5d_KS.xml.out, tests/t_ritz/t_ritz_KS.xml.in, tests/t_ritz/t_ritz_KS.xml.out, tests/t_stout_state/t_stout_state.xml.ini, tests/t_sumr/t_sumr.xml.ini, tests/t_unit_tests/t_lower_tests.xml, tests/t_unit_tests/t_lower_tests_METRIC.xml, tests/unprec_twoflav_wilson_monomial/t_unprec_twoflav_wilson_monomial.xml.ini, tests/wallformfac/make_source_pt_v5.linux-scalar-intel.xml, tests/wallformfac/make_source_wl_v5.linux-scalar-intel.xml, tests/wallformfac/prop_pt_v6.linux-scalar-intel.xml, tests/wallformfac/prop_wl_v6.linux-scalar-intel.xml, tests/wallformfac/spectrum_pt_v10.linux-scalar-intel.xml, tests/wallformfac/spectrum_wl_v10.linux-scalar-intel.xml, tests/wallformfac/test_wallformfac_v1.csh, tests/wallformfac/test_wallformfac_v2.csh, tests/wallformfac/test_wallformfac_v3.csh, tests/wallformfac/test_wallformfac_zolo4d_v1.csh, tests/wallformfac/wallformfac_v1.linux-scalar-intel.xml: Major overhaul of fermion and gauge action interface. Basically, all fermacts and gaugeacts now carry out template parameters. These are the fermion type, the "P" - conjugate momenta, and "Q" - generalized coordinates in the sense of Hamilton's equations. The fermbc's have been rationalized to never be over multi1d. The "createState" within the FermionAction is now fixed meaning the "u" fields are now from the coordinate type. There are now "ConnectState" that derive into FermState and GaugeState. 2006-04-03 00:51 edwards * aclocal.m4: Induced changes. 2006-04-03 00:51 edwards * lib/Makefile.am: Added new fermstate and gaugestate stuff. 2006-04-03 00:50 edwards * configure.ac: Changed to version 3.0 2006-03-28 00:12 edwards * lib/meas/inline/io/default_gauge_field.cc: Added check of default_gauge_field before reset. 2006-03-28 00:11 edwards * lib/named_obj.h: Added check of id. 2006-03-24 17:26 tag chroma2-15-3 2006-03-24 17:26 edwards * lib/meas/inline/io/szin_read_obj_funcmap.cc: Removed debugging. 2006-03-24 17:18 edwards * aclocal.m4, configure: Induced changes. 2006-03-24 17:17 edwards * NEWS: Info on 2.15.3 2006-03-24 17:17 edwards * configure.ac: Changed to 2.15.3 2006-03-24 17:16 edwards * lib/: funcmap.h, meas/inline/io/default_gauge_field.cc, meas/inline/io/inline_gaussian_obj.cc, meas/inline/io/inline_qio_read_obj.cc, meas/inline/io/inline_qio_write_erase_obj.cc, meas/inline/io/inline_qio_write_obj.cc, meas/inline/io/inline_szin_read_obj.cc, meas/inline/io/inline_szin_write_obj.cc, meas/inline/io/inline_xml_write_obj.cc, meas/inline/io/qio_read_obj_funcmap.cc, meas/inline/io/qio_read_obj_funcmap.h, meas/inline/io/qio_write_obj_funcmap.cc, meas/inline/io/qio_write_obj_funcmap.h, meas/inline/io/szin_read_obj_funcmap.cc, meas/inline/io/szin_read_obj_funcmap.h, meas/inline/io/szin_write_obj_funcmap.cc, meas/inline/io/szin_write_obj_funcmap.h, meas/inline/io/xml_write_obj_funcmap.cc, meas/inline/io/xml_write_obj_funcmap.h: OOoohh, a nasty one. Put a disambiguator on the funcmap to force the multiple funcmaps to be a different type. The point is void (*)(string, string) used in the XML writer, SZIN reader/writer, QIO reader/writer are all the same types. The funcmap therefore is the same type for all these different readers/writers. That's bad. If we had a Class, then that would be a unique type disambiguator. So, we invent some kludgy Trait disambiguator (normally just a struct buried in a namespace) to aide as the disambiguator on the template parameters. 2006-03-21 14:19 tag chroma2-15-2 2006-03-21 14:19 edwards * tests/chroma/hadron/propagator/unprec_zolo_nef.metric.xml: Lower accuracy of tests. 2006-03-21 14:14 edwards * lib/: actions/ferm/fermacts/prec_ovext_fermact_array_w.h, actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.h, actions/ferm/fermacts/unprec_ovext_fermact_array_w.h, actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.h, util/gauge/gauge_startup.h: Narrow down some includes within enum_io. Now must pick up cfgtype_io.h 2006-03-21 14:13 edwards * lib/Makefile.am: Added cfgtype_io 2006-03-21 14:13 edwards * lib/io/: cfgtype_io.cc, cfgtype_io.h, eigen_io.h, io.h, param_io.cc, param_io.h: Split off cfg_t to its own file. Tried to narrow down includes from enum_io 2006-03-21 14:11 edwards * lib/io/: hamiltonian_io.h, monomial_io.h: Added doxygen comments. 2006-03-21 14:00 edwards * NEWS: Info on 2.15.2 2006-03-21 13:32 edwards * aclocal.m4, configure: Induced changes. 2006-03-21 13:31 edwards * NEWS: Info on 2.15.2 2006-03-21 13:29 edwards * configure.ac: Changed to version 2.15.2 2006-03-21 13:28 edwards * lib/meas/smear/deriv_quark_displacement_w.cc: Bug fixes! Was missing lots of Gamma(4)*Gamma(5) at the end of loops. 2006-03-21 10:48 edwards * tests/chroma/hadron/propagator/unprec_zolo_nef.out.xml: Updated test. 2006-03-21 10:46 edwards * tests/chroma/hadron/propagator/unprec_zolo_nef.ini.xml: Changed RsdCG. 2006-03-20 23:46 edwards * tests/propagator/: propagator_ovdwf_v7.linux-scalar-intel.xml, propagator_prec_dwf_v7.linux-scalar-intel.xml, propagator_prec_ht_contfrac5d_tanh_b1c1_v7.linux-scalar-intel.xml, propagator_prec_ht_contfrac5d_tanh_v7.linux-scalar-intel.xml, propagator_prec_ht_contfrac5d_zolo_b1c1_v7.linux-scalar-intel.xml, propagator_prec_ht_contfrac5d_zolo_v7.linux-scalar-intel.xml, propagator_prec_ht_partfrac5d_tanh_v7.linux-scalar-intel.xml, propagator_prec_ht_partfrac5d_zolo_b1c1_v7.linux-scalar-intel.xml, propagator_prec_ht_partfrac5d_zolo_v7.linux-scalar-intel.xml, propagator_prec_ovlap_contfrac5d_tanh_v7.linux-scalar-intel.xml, propagator_prec_ovlap_contfrac5d_zolo_v7.linux-scalar-intel.xml, propagator_unprec_ht_contfrac5d_tanh_v7.linux-scalar-intel.xml, propagator_unprec_ht_contfrac5d_zolo_b1c1_v7.linux-scalar-intel.xml, propagator_unprec_ht_contfrac5d_zolo_v7.linux-scalar-intel.xml, propagator_unprec_ovlap_contfrac5d_tanh_v7.linux-scalar-intel.xml, propagator_unprec_tanh_nef_v7.linux-scalar-intel.xml, propagator_v7.linux-scalar-intel.xml, propagator_zolo4d_v7.linux-scalar-intel.xml, propagator_zolo_dwftransf4d_v7.linux-scalar-intel.xml, propagator_ovdwf_v7.xml.ini, propagator_prec_dwf_v7.xml.ini, propagator_prec_ht_contfrac5d_tanh_b1c1_v7.xml.ini, propagator_prec_ht_contfrac5d_tanh_v7.xml.ini, propagator_prec_ht_contfrac5d_zolo_b1c1_v7.xml.ini, propagator_prec_ht_contfrac5d_zolo_v7.xml.ini, propagator_prec_ht_partfrac5d_tanh_v7.xml.ini, propagator_prec_ht_partfrac5d_zolo_b1c1_v7.xml.ini, propagator_prec_ht_partfrac5d_zolo_v7.xml.ini, propagator_prec_ovlap_contfrac5d_tanh_v7.xml.ini, propagator_prec_ovlap_contfrac5d_zolo_v7.xml.ini, propagator_prec_tanh_nef_v7.xml.ini, propagator_prec_zolo_nef_b1c1_v7.xml.ini, propagator_prec_zolo_nef_v7.xml.ini, propagator_unprec_ht_contfrac5d_tanh_v7.xml.ini, propagator_unprec_ht_contfrac5d_zolo_b1c1_v7.xml.ini, propagator_unprec_ht_contfrac5d_zolo_v7.xml.ini, propagator_unprec_ovext_v7.xml.ini, propagator_unprec_ovlap_contfrac5d_tanh_v7.xml.ini, propagator_unprec_tanh_nef_v7.xml.ini, propagator_v7.xml.ini, propagator_zolo4d_v7.xml.ini, propagator_zolo_dwftransf4d_v7.xml.ini: Removed old inputs. 2006-03-20 23:45 tag chroma2-15-1 2006-03-20 23:45 edwards * NEWS: Info on 2.15.1 2006-03-20 23:43 edwards * aclocal.m4, configure: Induced changes. 2006-03-20 23:43 edwards * configure.ac: Changed to 2.15.1 2006-03-20 23:42 edwards * lib/actions/ferm/fermacts/: prec_ht_contfrac5d_fermact_array_w.cc, prec_ht_contfrac5d_fermact_array_w.h, prec_kno_fermact_array_w.cc, prec_kno_fermact_array_w.h, prec_ovlap_contfrac5d_fermact_array_w.cc, prec_ovlap_contfrac5d_fermact_array_w.h, prec_zolo_nef_fermact_array_w.cc, prec_zolo_nef_fermact_array_w.h, unprec_zolo_nef_fermact_array_w.cc, unprec_zolo_nef_fermact_array_w.h: Removed use of overlap_state and instead use the default createState. 2006-03-20 22:47 edwards * tests/chroma/hadron/propagator/: prec_ovext.ini.xml, prec_ovext.metric.xml, prec_ovext.out.xml, regres.pl, unprec_ovext.ini.xml, unprec_ovext.metric.xml, unprec_ovext.out.xml: More regression tests. 2006-03-20 22:31 edwards * tests/chroma/hadron/propagator/: regres.pl, unprec_dwftransf.ini.xml, unprec_dwftransf.metric.xml, unprec_dwftransf.out.xml: More regression tests. 2006-03-20 22:18 edwards * tests/chroma/hadron/propagator/: prec_zolo_nef.ini.xml, prec_zolo_nef.out.xml, regres.pl, unprec_zolo_nef.ini.xml, unprec_zolo_nef.metric.xml, unprec_zolo_nef.out.xml: Updated and added more regression tests. 2006-03-20 22:14 edwards * tests/chroma/hadron/propagator/: prec_zolo_nef.ini.xml, prec_zolo_nef.metric.xml, prec_zolo_nef.out.xml, regres.pl: More regression tests. 2006-03-20 22:09 edwards * tests/chroma/hadron/propagator/: prec_clover.ini.xml, prec_clover.out.xml, prec_dwf.ini.xml, prec_dwf.out.xml, prec_ht_contfrac5d.ini.xml, prec_ht_contfrac5d.metric.xml, prec_ht_contfrac5d.out.xml, prec_ovlap_contfrac5d.ini.xml, prec_ovlap_contfrac5d.metric.xml, prec_ovlap_contfrac5d.out.xml, prec_parwilson.ini.xml, prec_parwilson.out.xml, prec_wilson-smearing.ini.xml, prec_wilson-smearing.out.xml, prec_wilson-twisted.ini.xml, prec_wilson-twisted.out.xml, prec_wilson.ferm.ini.xml, prec_wilson.ini.xml, prec_wilson.out.xml, regres.pl, unprec-ovlap-zolo4d.ini.xml, unprec-ovlap-zolo4d.out.xml, unprec-zolo-ev-multi.out.xml, unprec_clover.ini.xml, unprec_clover.out.xml, unprec_hamberwu.ini.xml, unprec_hamberwu.out.xml, unprec_ovlap_contfrac5d.ini.xml, unprec_ovlap_contfrac5d.metric.xml, unprec_ovlap_contfrac5d.out.xml: Updated and added more regression tests. 2006-03-20 12:44 edwards * lib/eo_prec_linop.h: Added doxygen comments. 2006-03-20 00:58 tag chroma2-15-0 2006-03-20 00:58 edwards * tests/chroma/hadron/propagator/: prec_wilson-smearing.ini.xml, prec_wilson-smearing.metric.xml, prec_wilson-smearing.out.xml, regres.pl: Added new smearing tests. 2006-03-20 00:51 edwards * NEWS: Info on 2.15.0 2006-03-20 00:48 edwards * tests/chroma/hadron/propagator/: prec_wilson-twisted.ini.xml, prec_wilson-twisted.out.xml: Fixed again. 2006-03-20 00:46 edwards * tests/spectrum_s/spectrum_s_reg_test_output.xml: Updated regression test using new default gauge field. 2006-03-20 00:31 edwards * tests/chroma/hadron_s/: spectrum_s/spectrum_s.out.xml, spectrum_s.ini.xml: Updated. 2006-03-20 00:27 edwards * tests/chroma/: hadron/qqbar/qqbar.ini.xml, hadron/qqbar/qqbar.out.xml, hadron/qqq/qqq.ini.xml, hadron/qqq/qqq.out.xml, smear/link_smear/link_smear.out.xml: Updated. 2006-03-20 00:21 edwards * tests/chroma/hadron/: make_source/dilute.out.xml, make_source/make_source.ini.xml, make_source/make_source.out.xml, make_source/source-deriv.out.xml, make_source/source-displace.ini.xml, make_source/source-displace.out.xml, mesonspec/mesonspec.out.xml, mres/mres.ini.xml, mres/mres.out.xml: Updated. 2006-03-20 00:11 edwards * tests/chroma/hadron/building_blocks/: bb.dat.xml, bb.ini.xml, bb.out.xml: Updated to new sources. 2006-03-20 00:09 edwards * tests/chroma/hadron/bar3ptfn/: bar3ptfn.ini.xml, bar3ptfn.out.xml: Updated 2006-03-19 23:58 edwards * tests/chroma/hadron/seqsource/: seqsource-baryon-v1.ini.xml, seqsource-baryon-v1.metric.xml, seqsource-baryon-v1.out.xml: renamed 2006-03-19 23:57 edwards * tests/chroma/hadron/building_blocks/: bb.dat.xml, bb.ini.xml, bb.out.xml: Updated. 2006-03-19 23:53 edwards * tests/chroma/hadron/noisy_building_blocks/: nbb-v1.dat_0.xml, nbb-v1.dat_1.xml, nbb.dat_0.xml, nbb.dat_1.xml, nbb.out.xml: Updated. 2006-03-19 23:50 edwards * tests/chroma/hadron/: seqsource/regres.pl, seqsource/seqsource-baryon.ini.xml, seqsource/seqsource-baryon.metric.xml, seqsource/seqsource-baryon.out.xml, seqsource/seqsource-derivmeson-v2.ini.xml, seqsource/seqsource-derivmeson.ini.xml, seqsource/seqsource-meson-v1.ini.xml, seqsource/seqsource-meson-v1.metric.xml, seqsource/seqsource-meson-v1.out.xml, seqsource/seqsource-meson.ini.xml, seqsource/seqsource-meson.metric.xml, seqsource/seqsource-meson.out.xml, seqsource/seqsource-photon-v2.ini.xml, seqsource/seqsource-photon.ini.xml, sink_smear/regres.pl, sink_smear/sink-deriv.out.xml, sink_smear/sink-displace.out.xml, sink_smear/sink_smearing-v5.ini.xml, sink_smear/sink_smearing-v5.metric.xml, sink_smear/sink_smearing-v5.out.xml, sink_smear/sink_smearing.ini.xml, sink_smear/sink_smearing.metric.xml, sink_smear/sink_smearing.out.xml, spectrum/spectrum-v12.out.xml, spectrumOct/spectrumOct-v11.out.xml: Updated tests. 2006-03-19 23:41 edwards * tests/chroma/hadron/: building_blocks/bb-v2.dat.xml, building_blocks/bb-v2.ini.xml, building_blocks/bb-v2.metric.xml, building_blocks/bb-v2.out.xml, building_blocks/bb.ini.xml, building_blocks/bb.metric.xml, building_blocks/bb.out.xml, building_blocks/regres.pl, mesonspec/mesonspec.out.xml, mres/mres-v1.ini.xml, mres/mres-v1.metric.xml, mres/mres-v1.out.xml, mres/mres.ini.xml, mres/mres.metric.xml, mres/mres.out.xml, mres/regres.pl, noisy_building_blocks/nbb-v1.ini.xml, noisy_building_blocks/nbb-v1.out.xml, noisy_building_blocks/nbb.ini.xml, noisy_building_blocks/nbb.out.xml, qqq/qqq-v4.ini.xml, qqq/qqq-v4.out.xml, qqq/qqq.ini.xml, qqq/qqq.out.xml, qqqNucNuc/qqqNucNuc-v1.ini.xml, qqqNucNuc/qqqNucNuc-v1.out.xml, qqqNucNuc/qqqNucNuc.ini.xml, qqqNucNuc/qqqNucNuc.out.xml: Updated tests. 2006-03-19 23:29 edwards * tests/chroma/hadron/bar3ptfn/: bar3ptfn-v6.ini.xml, bar3ptfn-v6.out.xml, bar3ptfn.ini.xml, bar3ptfn.out.xml: Moved around files. 2006-03-19 23:25 edwards * tests/chroma/hadron/: make_source/make_source-v6.ini.xml, make_source/make_source-v6.metric.xml, make_source/make_source-v6.out.xml, make_source/make_source.ini.xml, make_source/make_source.metric.xml, make_source/make_source.out.xml, make_source/regres.pl, qqbar/qqbar-v4.ini.xml, qqbar/qqbar-v4.out.xml, qqbar/qqbar.ini.xml, qqbar/qqbar.out.xml: Moved around files. 2006-03-19 23:24 edwards * tests/chroma/hadron/propagator/: prec_clover-v9.ini.xml, prec_clover-v9.metric.xml, prec_clover-v9.out.xml, prec_dwf-v9.ini.xml, prec_dwf-v9.metric.xml, prec_dwf-v9.out.xml, prec_parwilson-v9.ini.xml, prec_parwilson-v9.metric.xml, prec_parwilson-v9.out.xml, prec_wilson-twisted-v9.ini.xml, prec_wilson-twisted-v9.metric.xml, prec_wilson-twisted-v9.out.xml, prec_wilson-v9.ferm.ini.xml, prec_wilson-v9.ferm.out.xml, prec_wilson-v9.ini.xml, prec_wilson-v9.metric.xml, prec_wilson-v9.out.xml, unprec-ovlap-zolo4d-v9.ini.xml, unprec-ovlap-zolo4d-v9.metric.xml, unprec-ovlap-zolo4d-v9.out.xml, unprec-zolo-ev-multi-v8.ini.xml, unprec-zolo-ev-multi-v8.metric.xml, unprec-zolo-ev-multi-v8.out.xml, unprec_clover-v9.ini.xml, unprec_clover-v9.metric.xml, unprec_clover-v9.out.xml, unprec_hamberwu-v9.ini.xml, unprec_hamberwu-v9.metric.xml, unprec_hamberwu-v9.out.xml: Moved around filenames. 2006-03-19 23:23 edwards * tests/chroma/: eig/ritz_Hw-v1.out.xml, gfix/coulgauge/coulgauge.out.xml, hadron/make_source/dilute.out.xml, hadron/make_source/make_source-v6.out.xml, hadron/make_source/source-deriv.out.xml, hadron/make_source/source-displace.out.xml, hadron/propagator/prec_clover.ini.xml, hadron/propagator/prec_clover.metric.xml, hadron/propagator/prec_clover.out.xml, hadron/propagator/prec_dwf.ini.xml, hadron/propagator/prec_dwf.metric.xml, hadron/propagator/prec_dwf.out.xml, hadron/propagator/prec_parwilson.ini.xml, hadron/propagator/prec_parwilson.metric.xml, hadron/propagator/prec_parwilson.out.xml, hadron/propagator/prec_wilson-twisted.ini.xml, hadron/propagator/prec_wilson-twisted.metric.xml, hadron/propagator/prec_wilson-twisted.out.xml, hadron/propagator/prec_wilson.ferm.ini.xml, hadron/propagator/prec_wilson.ferm.out.xml, hadron/propagator/prec_wilson.ini.xml, hadron/propagator/prec_wilson.metric.xml, hadron/propagator/prec_wilson.out.xml, hadron/propagator/regres.pl, hadron/propagator/unprec-ovlap-zolo4d.ini.xml, hadron/propagator/unprec-ovlap-zolo4d.metric.xml, hadron/propagator/unprec-ovlap-zolo4d.out.xml, hadron/propagator/unprec-zolo-ev-multi.ini.xml, hadron/propagator/unprec-zolo-ev-multi.metric.xml, hadron/propagator/unprec-zolo-ev-multi.out.xml, hadron/propagator/unprec_clover.ini.xml, hadron/propagator/unprec_clover.metric.xml, hadron/propagator/unprec_clover.out.xml, hadron/propagator/unprec_hamberwu.ini.xml, hadron/propagator/unprec_hamberwu.metric.xml, hadron/propagator/unprec_hamberwu.out.xml: Updates of tests. 2006-03-19 23:22 edwards * mainprogs/main/: chroma.cc, hmc.cc, purgaug.cc, qpropqio.cc, spectrum_s.cc: Switched over inline measurements to pushing the gauge field into a default NamedObject buffer. 2006-03-19 23:22 edwards * lib/meas/inline/: abs_inline_measurement.h, abs_inline_measurement_factory.h, inline.h, eig/inline_eigbnds.cc, eig/inline_eigbnds.h, eig/inline_ritz_H_w.cc, eig/inline_ritz_H_w.h, gfix/inline_coulgauge.cc, gfix/inline_coulgauge.h, glue/inline_fuzwilp.cc, glue/inline_fuzwilp.h, glue/inline_plaquette.cc, glue/inline_plaquette.h, glue/inline_polylp.cc, glue/inline_polylp.h, glue/inline_wilslp.cc, glue/inline_wilslp.h, hadron/inline_bar3ptfn_w.cc, hadron/inline_bar3ptfn_w.h, hadron/inline_building_blocks_w.cc, hadron/inline_building_blocks_w.h, hadron/inline_hadspec_w.cc, hadron/inline_hadspec_w.h, hadron/inline_make_source_ferm_w.cc, hadron/inline_make_source_ferm_w.h, hadron/inline_make_source_w.cc, hadron/inline_make_source_w.h, hadron/inline_mesonspec_w.cc, hadron/inline_mesonspec_w.h, hadron/inline_mres_w.cc, hadron/inline_mres_w.h, hadron/inline_multi_propagator_w.cc, hadron/inline_multi_propagator_w.h, hadron/inline_multipole_w.cc, hadron/inline_multipole_w.h, hadron/inline_noisy_building_blocks_w.cc, hadron/inline_noisy_building_blocks_w.h, hadron/inline_propagator_ferm_w.cc, hadron/inline_propagator_ferm_w.h, hadron/inline_propagator_w.cc, hadron/inline_propagator_w.h, hadron/inline_qpropadd_w.cc, hadron/inline_qpropadd_w.h, hadron/inline_qpropqio_w.cc, hadron/inline_qpropqio_w.h, hadron/inline_qqbar_w.cc, hadron/inline_qqbar_w.h, hadron/inline_qqqNucNuc_w.cc, hadron/inline_qqqNucNuc_w.h, hadron/inline_qqq_w.cc, hadron/inline_qqq_w.h, hadron/inline_seqsource_w.cc, hadron/inline_seqsource_w.h, hadron/inline_sink_smear_w.cc, hadron/inline_sink_smear_w.h, hadron/inline_spectrumOct_w.cc, hadron/inline_spectrumOct_w.h, hadron/inline_spectrum_w.cc, hadron/inline_spectrum_w.h, hadron_s/inline_spectrum_s.cc, hadron_s/inline_spectrum_s.h, io/default_gauge_field.cc, io/default_gauge_field.h, io/inline_erase_obj.cc, io/inline_erase_obj.h, io/inline_gaussian_obj.cc, io/inline_gaussian_obj.h, io/inline_list_obj.cc, io/inline_list_obj.h, io/inline_nersc_write_obj.cc, io/inline_nersc_write_obj.h, io/inline_qio_read_obj.cc, io/inline_qio_read_obj.h, io/inline_qio_write_erase_obj.cc, io/inline_qio_write_erase_obj.h, io/inline_qio_write_obj.cc, io/inline_qio_write_obj.h, io/inline_snarf_obj.cc, io/inline_snarf_obj.h, io/inline_szin_read_obj.cc, io/inline_szin_read_obj.h, io/inline_szin_write_obj.cc, io/inline_szin_write_obj.h, io/inline_xml_write_obj.cc, io/inline_xml_write_obj.h, io/io.h, smear/inline_ape_smear.cc, smear/inline_ape_smear.h, smear/inline_hyp_smear.cc, smear/inline_hyp_smear.h, smear/inline_link_smear.cc, smear/inline_link_smear.h, smear/inline_stout_smear.cc, smear/inline_stout_smear.h: Switched inline measurements from gauge field argument to reading an optional default gauge field. 2006-03-19 23:21 edwards * lib/actions/ferm/fermacts/prec_dwf_fermact_array_w.cc: Moved in obsolete read of ChiralParam from lib/io/param_io.h 2006-03-19 23:20 edwards * lib/io/: param_io.cc, param_io.h: Cleaned out the ChiralParam stuff and moved to prec-dwf fermact. 2006-03-19 23:18 edwards * aclocal.m4, configure: Induced changes. 2006-03-19 23:17 edwards * lib/Makefile.am: Added default_gauge_field.{h,cc} 2006-03-19 23:17 edwards * configure.ac: Changed to 2.15.0 . 2006-03-17 11:59 tag chroma2-14-0 2006-03-17 11:59 edwards * lib/actions/ferm/fermbcs/schr_sf_fermbc_w.h: Ooops. Removed explicit SchrSFFermBC stuck in front of initBnd(). 2006-03-16 21:07 edwards * aclocal.m4, configure: Induced changes. 2006-03-16 21:06 edwards * configure.ac: Changed to 2.14.0 2006-03-16 21:05 edwards * lib/update/molecdyn/monomial/: one_flavor_rat_monomial5d_w.h, one_flavor_rat_monomial_w.h, two_flavor_hasenbusch_monomial_w.h, two_flavor_monomial5d_w.h, two_flavor_polynomial_monomial_w.h, two_flavor_polyprec_monomial_w.h: Added modifyF to all heatbaths to account for BC's. 2006-03-16 21:05 edwards * scripts/run_chroma_xmldiff.pl: Changed formatting of output - want the Conclusions to show up more nicely. 2006-03-16 20:39 edwards * lib/update/molecdyn/monomial/two_flavor_monomial_w.h: Put in required modifyF in heatbath but also have unwanted fermbc.zero() call in dsdq. 2006-03-16 20:38 edwards * NEWS: Info on 2.14.0 2006-03-16 12:20 edwards * lib/Makefile.am: Added schroedinger_fermbc_w.h 2006-03-15 22:00 edwards * lib/actions/ferm/fermbcs/: fermbc_factory_s.h, fermbc_factory_w.h, fermbcs.h, fermbcs_aggregate_s.h, fermbcs_aggregate_w.cc, fermbcs_aggregate_w.h, fermbcs_reader_s.h, fermbcs_reader_w.h, periodic_fermbc.h, periodic_fermbc_w.h, schr1link_fermbc_w.cc, schr1link_fermbc_w.h, schr2link_fermbc_w.cc, schr2link_fermbc_w.h, schr_chromomag_fermbc_w.cc, schr_chromomag_fermbc_w.h, schr_coupling_fermbc_w.cc, schr_coupling_fermbc_w.h, schr_dirich_fermbc_w.cc, schr_dirich_fermbc_w.h, schr_fermbc_params.cc, schr_fermbc_params.h, schr_fermbc_params_w.cc, schr_fermbc_params_w.h, schr_nonpert_fermbc_w.cc, schr_nonpert_fermbc_w.h, schr_sf_fermbc_w.cc, schr_sf_fermbc_w.h, schr_triv_fermbc_w.cc, schr_triv_fermbc_w.h, schroedinger_fermbc_w.h, simple_fermbc.h, simple_fermbc_s.h, simple_fermbc_w.h, twisted_fermbc_w.h: Added a slew of new schroedinger fermbcs. Changed doxygen group name from "fermbc" to "fermbcs" to be more like gaugebcs name. Removed obsolete schr1link_*.{h,cc} files. 2006-03-15 21:59 edwards * lib/actions/gauge/gaugebcs/: schr_chromomag_gaugebc.h, schr_coupling_gaugebc.h, schr_dirich_gaugebc.h, schr_nonpert_gaugebc.h, schr_triv_gaugebc.h, schroedinger_gaugebc.cc, schroedinger_gaugebc.h: Unprotected lSFmask() and SFBndFld() functions 2006-03-15 21:58 edwards * lib/Makefile.am: Added a slew of schroedinger functional fermbcs 2006-03-15 21:57 edwards * lib/gaugebc.h: Changed dummy argument name - just for informational purposes. 2006-03-15 21:57 edwards * lib/fermbc.h: Added a zero() function 2006-03-15 21:56 edwards * tests/chroma/hadron_s/spectrum_s/spectrum_s.out.xml: Updated tests yet again. 2006-03-15 10:43 edwards * tests/chroma/hadron_s/spectrum_s/spectrum_s.out.xml: Updated regression test. 2006-03-14 14:40 mcneile * tests/spectrum_s/spectrum_s_reg_test_output.xml: Updated output to fix regression test failure. 2006-03-13 23:55 edwards * lib/meas/inline/io/: inline_io_aggregate.cc, inline_xml_write_obj.cc, inline_xml_write_obj.h, xml_write_obj_funcmap.cc, xml_write_obj_funcmap.h: Added XML writers. 2006-03-13 23:54 edwards * lib/io/enum_io/enum_io.h: Obsolesced gaugebc_io 2006-03-13 23:54 edwards * lib/io/enum_io/enum_gaugebc_io.h: Deprecated enum_gaugebc_io 2006-03-13 23:53 edwards * lib/actions/ferm/fermbcs/: schr_fermbc_params.cc, schr_fermbc_params.h: Removed schrfuntype and enum_gaugebc_io 2006-03-13 23:53 edwards * lib/gaugebc.h: Removed include of enum_gaugebc_io.h 2006-03-13 23:51 edwards * lib/Makefile.am: Added schr chromomag and dirich. Removed enum_gaugebc_io.* 2006-03-13 23:49 edwards * lib/actions/gauge/gaugebcs/: gaugebc_aggregate.cc, gaugebcs.h, schr_chromomag_gaugebc.cc, schr_chromomag_gaugebc.h, schr_dirich_gaugebc.cc, schr_dirich_gaugebc.h, schr_gaugebc_params.h: More gaugebc stuff. 2006-03-13 10:25 edwards * lib/actions/ferm/fermbcs/fermbcs.h: Commented out schroedinger includes 2006-03-13 09:56 egregory * lib/meas/hadron/pseudoscalar_stoch_conn_s.cc: added brief documentation 2006-03-13 09:43 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: added call to function ks_local_loops_and_stoch_conn() and related infrastructure 2006-03-13 09:40 egregory * lib/meas/hadron/pseudoscalar_stoch_conn_s.cc: code for 4-link taste-singlet pseudoscalar connected correlator measurements. 2006-03-13 09:39 egregory * lib/meas/hadron/pseudoscalar_stoch_conn_s.h: class for 4-link pseudoscalar tatse sinbglet stochastic connected correlator measurement. 2006-03-13 09:37 egregory * lib/meas/hadron/stoch_conn_s.h: class for stochastic connected correlators measurements 2006-03-13 09:35 egregory * lib/meas/hadron/ks_local_loops.h: added prototype for ks_local_loops_and_stoch_conn() 2006-03-13 09:34 egregory * lib/meas/hadron/ks_local_loops.cc: added function ks_local_loops_and_stoch_conn() to do diagnostic stochastic connected correlators of 4-link taste-singlet pion. 2006-03-13 09:32 egregory * lib/meas/hadron/hadron_s.h: added include for pseudoscalar_stoch_conn_s.h 2006-03-13 09:28 egregory * lib/Makefile.am: added 3 lines relevant to stochastic connected correlators 2006-03-13 00:19 edwards * lib/actions/: ferm/fermbcs/fermbcs_aggregate_w.cc, gauge/gaugebcs/gaugebc_aggregate.cc, gauge/gaugebcs/gaugebcs.h, gauge/gaugebcs/schr1link_gaugebc.cc, gauge/gaugebcs/schr1link_gaugebc.h, gauge/gaugebcs/schr2link_gaugebc.cc, gauge/gaugebcs/schr2link_gaugebc.h, gauge/gaugebcs/schr_coupling_gaugebc.cc, gauge/gaugebcs/schr_coupling_gaugebc.h, gauge/gaugebcs/schr_gaugebc_params.cc, gauge/gaugebcs/schr_gaugebc_params.h, gauge/gaugebcs/schr_nonpert_gaugebc.cc, gauge/gaugebcs/schr_nonpert_gaugebc.h, gauge/gaugebcs/schr_sf_gaugebc.cc, gauge/gaugebcs/schr_sf_gaugebc.h, gauge/gaugebcs/schr_triv_gaugebc.cc, gauge/gaugebcs/schr_triv_gaugebc.h, gauge/gaugebcs/schroedinger_gaugebc.cc, gauge/gaugebcs/schroedinger_gaugebc.h: Removed schr1link and schr2link gauge stuff. Commented out for now the same stuff in fermions (will replace with something else). Added new schr_{sf,triv,nonpert,coupling}_gaugebc.{h,cc} . Seems to work - at least t_leapfrog conserves energy. Had a big revelation - none of the integrator, monomials, hamilt. should know about the gaugebc stuff. That's all handled with the createState and now the dsdu in the gaugeact and soon the linops impose their BC. 2006-03-13 00:16 edwards * lib/gaugebc.h: Removed stuff that was never exposed or needed. 2006-03-13 00:15 edwards * lib/Makefile.am: Removed schr1link and schr2link gauge bc stuff. Added schr_{coupling,triv,sf,nonpert}_gaugebc.h Commented out usage of schr{1,2}link in ferm stuff for now. 2006-03-13 00:13 edwards * lib/actions/gauge/gaugeacts/: pg_gaugeact.cc, plaq_gaugeact.cc, rect_gaugeact.cc: Added what is now determined to be a missing getGaugeBC().zero(ds_u) at the end of each dsdu call. This is the missing piece to impose the gauge BC. 2006-03-11 15:25 edwards * lib/gaugebc.h: Changed comments. 2006-03-08 17:47 tag chroma2-13-4 2006-03-08 17:47 edwards * aclocal.m4, configure: Induced changes. 2006-03-08 17:45 edwards * lib/meas/: sinks/sh_sink_smearing.cc, sources/sh_source_const.cc: Added diagnostic output 2006-03-08 17:45 edwards * lib/actions/ferm/: fermacts/clover_fermact_params_w.cc, fermacts/clover_fermact_params_w.h, linop/prec_clover_linop_w.cc, linop/unprec_clover_linop_w.cc: Backed out clover support for external field strength. It's breaking something - causing inversions to fail in parallel. BTW, the current code wouldn't work under HMC. 2006-03-08 17:43 edwards * NEWS, configure.ac: Changed to 2.13.4 2006-03-06 17:14 tag chroma2-13-3 2006-03-06 17:14 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Bug fix. 2006-03-06 17:13 edwards * tests/chroma/hadron/mesonspec/: mesonspec.ini.xml, mesonspec.metric.xml, mesonspec.out.xml: Updated regression test. 2006-03-06 16:30 edwards * configure: Induced changes, 2006-03-06 16:29 edwards * aclocal.m4: Induced changes. 2006-03-06 16:28 edwards * configure.ac: Changed to 2.13.3 2006-03-06 16:28 edwards * NEWS: Info on 2.13.3 2006-03-06 16:22 edwards * lib/meas/inline/hadron/: inline_mesonspec_w.cc, inline_mesonspec_w.h: Changed to use an array of sink smeared props. 2006-03-06 16:22 edwards * tests/chroma/hadron/mesonspec/: mesonspec.ini.xml, mesonspec.out.xml: Changed input to use an array of sink smeared props 2006-03-03 02:37 edwards * tests/chroma/hadron/mesonspec/: mesonspec.ini.xml, mesonspec.metric.xml, mesonspec.out.xml: Updated test. 2006-03-03 02:32 tag chroma2-13-2 2006-03-03 02:32 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Bug fix - fixed POINT_SINK 2006-03-03 02:26 edwards * tests/chroma/hadron/make_source/make_source-v6.out.xml: Fixed regression test to match input. 2006-03-02 21:51 edwards * lib/actions/ferm/linop/unprec_clover_linop_w.cc: Small bug fix in nFlops. 2006-03-02 21:37 edwards * lib/actions/ferm/linop/: clover_term_base_w.cc, prec_clover_linop_w.cc, unprec_clover_linop_w.cc, unprec_wilson_linop_w.cc, unprec_wilson_linop_w.h: Added flop counts. 2006-03-02 21:36 edwards * aclocal.m4, configure: Induced changes. 2006-03-02 21:35 edwards * NEWS: More infon on 2.13.2 2006-03-02 21:34 edwards * configure.ac: Changed to 2.13.2 2006-03-02 21:34 edwards * NEWS: Info on 2.13.2 2006-03-02 17:24 edwards * lib/Makefile.am: Added partwall_source_const.{h,c} 2006-03-02 17:24 edwards * tests/chroma/hadron/make_source/make_source-v6.ini.xml, tests/chroma/hadron/make_source/make_source-v6.metric.xml, tests/chroma/hadron/make_source/make_source-v6.out.xml, lib/meas/sources/partwall_source_const.cc, lib/meas/sources/partwall_source_const.h, lib/meas/sources/source_const_aggregate.cc: Added partial wall source. 2006-03-02 16:27 edwards * tests/chroma/hadron/make_source/: make_source-v6.ini.xml, make_source-v6.metric.xml, make_source-v6.out.xml: Added wall sources. 2006-03-02 12:38 edwards * lib/meas/hadron/photon_seqsrc_w.cc: Added printout of omega. 2006-03-01 15:14 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Added new push level. 2006-03-01 13:58 bjoo * lib/actions/ferm/: fermacts/clover_fermact_params_w.cc, fermacts/clover_fermact_params_w.h, linop/prec_clover_linop_w.cc, linop/unprec_clover_linop_w.cc: Added optional External Field strength to prec and unprec clover fermact params and linops 2006-02-28 16:46 edwards * tests/chroma/hadron/mesonspec/mesonspec.metric.xml: Updated paths. 2006-02-28 16:46 edwards * tests/chroma/hadron/mesonspec/mesonspec.out.xml: Updated test. 2006-02-28 16:40 edwards * lib/meas/inline/hadron/inline_mesonspec_w.cc: Changed output version. 2006-02-28 16:20 edwards * tests/regres.pl: New regression test. 2006-02-28 16:18 edwards * tests/chroma/hadron/mesonspec/: mesonspec.ini.xml, mesonspec.metric.xml, mesonspec.out.xml, regres.pl: New regression tests. 2006-02-28 15:55 edwards * lib/Makefile.am: Added inline_mesonspec_w 2006-02-28 15:55 edwards * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_mesonspec_w.cc, inline_mesonspec_w.h: Added inline_mesonspec 2006-02-28 14:59 edwards * lib/meas/inline/hadron/inline_hadspec_w.cc: Changed xml tag name. 2006-02-28 08:06 mcneile * tests/regres.pl: I have put back the staggered code test. 2006-02-28 05:41 mcneile * tests/spectrum_s/: spectrum_s_reg.xml, spectrum_s_reg_test_output.xml: These are the new test cases. 2006-02-28 05:40 mcneile * tests/spectrum_s/regres.pl: I have changed the test so that a DISORDERED configuration is used 2006-02-27 12:09 bjoo * lib/update/molecdyn/integrator/lcm_pqp_leapfrog_mts.cc, mainprogs/tests/t_leapfrog.cc, tests/regres.pl: Added regression tests 2006-02-27 12:06 bjoo * tests/t_leapfrog/: regres.pl, t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.ini.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.metric.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.out.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.ini.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.out.xml, t_leapfrog.parwilson_pqp_integrator_mts.ini.xml, t_leapfrog.parwilson_pqp_integrator_mts.metric.xml, t_leapfrog.parwilson_pqp_integrator_mts.out.xml, t_leapfrog.parwilson_qpq_integrator_mts.ini.xml, t_leapfrog.prec_2flav_clover_ee_oo.metric.xml, t_leapfrog.parwilson_minimal_norm_2nd_order_qpq_integrator_mts.metric.xml: Made regres tests for clover ee oo and for Carstens new MTS integrators 2006-02-27 11:37 edwards * scripts/build.sh: Updated mailing addresses and finishmail message. 2006-02-27 10:34 bjoo * lib/: Makefile.am, update/molecdyn/integrator/integrator.h, update/molecdyn/integrator/integrator_aggregate.cc, update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.cc, update/molecdyn/integrator/lcm_minimum_norm2_integrator_mts.h, update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.cc, update/molecdyn/integrator/lcm_minimum_norm2_qpq_integrator_mts.h, update/molecdyn/integrator/lcm_pqp_leapfrog_mts.cc, update/molecdyn/integrator/lcm_pqp_leapfrog_mts.h: Automade Makefile.ins - added Carstens XML files 2006-02-27 10:32 bjoo * tests/hmc/hmc.prec_parwilson.ini.xml: Added Carsten's HMC file 2006-02-27 10:31 bjoo * tests/t_leapfrog/: t_leapfrog.parwilson_minimal_norm_2nd_order_integrator_mts.ini.xml, t_leapfrog.parwilson_minimal_norm_2nd_qpq_integrator_mts.ini.xml, t_leapfrog.parwilson_qpq_integrator_mts.ini.xml: Added input files for MTS integrators 2006-02-27 00:51 tag chroma2-13-1 2006-02-27 00:51 edwards * tests/: chroma/glue/fuzwilp/fuzwilp.ini.xml, chroma/glue/fuzwilp/fuzwilp.metric.xml, chroma/glue/fuzwilp/fuzwilp.out.xml, chroma/glue/fuzwilp/regres.pl, regres.pl: New regression tests. 2006-02-27 00:25 edwards * NEWS: Info on 2.13.1 2006-02-27 00:21 edwards * aclocal.m4, configure: Induced changes. 2006-02-27 00:18 edwards * configure.ac: Changed to version 2.13.1 2006-02-26 17:45 edwards * lib/meas/inline/io/qio_write_obj_funcmap.cc: Added staggered prop writers. 2006-02-26 17:04 edwards * tests/: regres.pl, chroma/hadron_s/spectrum_s/regres.pl, chroma/hadron_s/spectrum_s/spectrum_s.ini.xml, chroma/hadron_s/spectrum_s/spectrum_s.metric.xml, chroma/hadron_s/spectrum_s/spectrum_s.out.xml: Added spectrum_s tests. 2006-02-26 16:42 edwards * tests/chroma/hadron_s/spectrum_s.ini.xml: Added staggered input. 2006-02-26 16:41 edwards * lib/meas/inline/: inline_aggregate.cc, hadron_s/hadron_s.h, hadron_s/inline_hadron_aggregate.h, hadron_s/inline_hadron_aggregate_s.cc, hadron_s/inline_hadron_aggregate_s.h: Added inline_hadron_aggregate_s.{h,cc}. Now include staggered measurements. 2006-02-26 16:40 edwards * lib/meas/inline/hadron_s/: util_compute_8_pions_s.cc, util_compute_8_scalars_s.cc, util_compute_8_vectors_s.cc, util_compute_meson_s.cc, util_compute_quark_prop_s.cc, util_compute_singlet_ps.cc: Commented out include of fermbcs.h - not needed. 2006-02-26 16:37 edwards * lib/Makefile.am: Renamed and added new inline_hadron_aggregate_s.{h,cc} 2006-02-26 16:18 edwards * lib/meas/hadron/scalar_loops_s.cc: Put TimeSliceFunc in an anonymous namespace. This avoids colliding with chroma/lib/util/ft/sftmom.cc . However, really this stag. code should use the phases stuff to simply their life. 2006-02-26 16:17 edwards * lib/util/ft/sftmom.cc: Put TimeSliceFunc in an anonymous namespace. 2006-02-26 15:13 edwards * lib/: Makefile.am, actions/ferm/fermbcs/fermbcs.h: Added periodic_fermbc.h 2006-02-26 10:47 mcneile * mainprogs/tests/t_fuzwilp.cc: I have just fixed a typo 2006-02-26 09:43 mcneile * lib/meas/glue/fuzwilp.cc: I have fixed a typo in the file. 2006-02-26 09:31 mcneile * mainprogs/tests/t_fuzwilp.cc: I have added the additional parameter that Alan wanted. 2006-02-26 09:17 mcneile * lib/meas/inline/glue/: inline_fuzwilp.cc, inline_fuzwilp.h: I have added a cut off parameter to stop the computation of Wilson loops at long time tange. 2006-02-26 09:11 mcneile * lib/meas/glue/: fuzwilp.h, fuzwilp.cc: This is a check in for Alan Irving. A cut off is introduced for the computation of Wilson loops, This stops the code spending a lot of time computing stuff that is too noisy to be useful. 2006-02-25 23:32 tag chroma2-13-0 2006-02-25 23:32 edwards * tests/chroma/gfix/coulgauge/regres.pl: New regression test. 2006-02-25 23:30 edwards * tests/: chroma/gfix/coulgauge/coulgauge.ini.xml, chroma/gfix/coulgauge/coulgauge.metric.xml, chroma/gfix/coulgauge/coulgauge.out.xml, regres.pl: New regression tests. 2006-02-25 23:19 edwards * lib/meas/inline/gfix/inline_coulgauge.cc: Bug fix. Changed name to COULOMB_GAUGEFIX. 2006-02-25 22:47 edwards * lib/: fermbc.h, gaugebc.h, actions/ferm/fermacts/fermacts_aggregate_w.cc, actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.cc, actions/ferm/fermacts/poly_cheb_fermact_w.cc, actions/ferm/fermacts/prec_clover_fermact_w.cc, actions/ferm/fermacts/prec_dwf_fermact_array_w.cc, actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/prec_kno_fermact_array_w.cc, actions/ferm/fermacts/prec_nef_fermact_array_w.cc, actions/ferm/fermacts/prec_ovdwf_fermact_array_w.cc, actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/prec_parwilson_fermact_w.cc, actions/ferm/fermacts/prec_stout_fermact_array_w.cc, actions/ferm/fermacts/prec_stout_fermact_w.cc, actions/ferm/fermacts/prec_wilson_fermact_w.cc, actions/ferm/fermacts/prec_zolo_nef_fermact_array_w.cc, actions/ferm/fermacts/unprec_clover_fermact_w.cc, actions/ferm/fermacts/unprec_dwf_fermact_array_w.cc, actions/ferm/fermacts/unprec_dwftransf_fermact_w.cc, actions/ferm/fermacts/unprec_hamberwu_fermact_w.cc, actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/unprec_nef_fermact_array_w.cc, actions/ferm/fermacts/unprec_ovdwf_fermact_array_w.cc, actions/ferm/fermacts/unprec_ovext_fermact_array_w.cc, actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/unprec_parwilson_fermact_w.cc, actions/ferm/fermacts/unprec_stout_fermact_array_w.cc, actions/ferm/fermacts/unprec_stout_fermact_w.cc, actions/ferm/fermacts/unprec_w12_fermact_w.cc, actions/ferm/fermacts/unprec_wilson_fermact_w.cc, actions/ferm/fermacts/unprec_zolo_nef_fermact_array_w.cc, actions/ferm/fermbcs/fermbcs.h, actions/ferm/fermbcs/fermbcs_aggregate_s.cc, actions/ferm/fermbcs/fermbcs_aggregate_s.h, actions/ferm/fermbcs/fermbcs_aggregate_w.cc, actions/ferm/fermbcs/fermbcs_aggregate_w.h, actions/ferm/fermbcs/fermbcs_reader_s.cc, actions/ferm/fermbcs/fermbcs_reader_s.h, actions/ferm/fermbcs/fermbcs_reader_w.cc, actions/ferm/fermbcs/fermbcs_reader_w.h, actions/ferm/fermbcs/fermbcs_s.cc, actions/ferm/fermbcs/fermbcs_s.h, actions/ferm/fermbcs/fermbcs_w.cc, actions/ferm/fermbcs/fermbcs_w.h, actions/ferm/fermbcs/periodic_fermbc.h, actions/ferm/fermbcs/periodic_fermbc_w.cc, actions/ferm/fermbcs/periodic_fermbc_w.h, actions/ferm/fermbcs/schr1link_fermbc_w.cc, actions/ferm/fermbcs/schr1link_fermbc_w.h, actions/ferm/fermbcs/schr2link_fermbc_w.cc, actions/ferm/fermbcs/schr2link_fermbc_w.h, actions/ferm/fermbcs/schr_fermbc_params.cc, actions/ferm/fermbcs/schr_fermbc_params.h, actions/ferm/fermbcs/schroedinger_fermbc_w.h, actions/ferm/fermbcs/simple_fermbc.h, actions/ferm/fermbcs/simple_fermbc_w.cc, actions/ferm/fermbcs/simple_fermbc_w.h, actions/ferm/fermbcs/twisted_fermbc_w.cc, actions/ferm/fermbcs/twisted_fermbc_w.h, actions/gauge/gaugebcs/gaugebc_aggregate.cc, actions/gauge/gaugebcs/gaugebc_periodic.cc, actions/gauge/gaugebcs/gaugebc_periodic.h, actions/gauge/gaugebcs/gaugebc_schroedinger.cc, actions/gauge/gaugebcs/gaugebc_schroedinger.h, actions/gauge/gaugebcs/gaugebc_simple.cc, actions/gauge/gaugebcs/gaugebc_simple.h, actions/gauge/gaugebcs/gaugebcs.h, actions/gauge/gaugebcs/periodic_gaugebc.cc, actions/gauge/gaugebcs/periodic_gaugebc.h, actions/gauge/gaugebcs/schr1link_gaugebc.cc, actions/gauge/gaugebcs/schr1link_gaugebc.h, actions/gauge/gaugebcs/schr2link_gaugebc.cc, actions/gauge/gaugebcs/schr2link_gaugebc.h, actions/gauge/gaugebcs/schr_gaugebc_params.cc, actions/gauge/gaugebcs/schr_gaugebc_params.h, actions/gauge/gaugebcs/schroedinger_gaugebc.h, actions/gauge/gaugebcs/simple_gaugebc.cc, actions/gauge/gaugebcs/simple_gaugebc.h: Rearrangement of fermbcs and gaugebcs. Split off SchrFermBC and SchrGaugeBC along with Simple and Periodic varieties and pushed them down into the resp. fermbcs and gaugebcs directories. The top level fermbc.h and gaugebc.h are now only the base classes. Renamed all gaugebc files to be consistent with the fermbc and fermact filenames. Start of true Schroedinger functional support. 2006-02-25 22:45 edwards * lib/meas/inline/hadron_s/inline_spectrum_s.cc: Changed include of fermbcs to simple_fermbc_s.h 2006-02-25 22:43 edwards * lib/Makefile.am: Reorg of gaugebcs and fermbcs 2006-02-25 22:42 edwards * aclocal.m4, configure: Induced changes. 2006-02-25 22:41 edwards * configure.ac: Changed to 2.13.0 2006-02-25 22:41 edwards * NEWS: Info on 2.13.0 2006-02-25 22:35 tag chroma2-12-1 2006-02-25 22:35 edwards * aclocal.m4, configure: Induced changes. 2006-02-25 22:34 edwards * NEWS: Info on 2.12.1 2006-02-25 22:34 edwards * configure.ac: Changed to 2.12.1 2006-02-25 22:33 edwards * NEWS: Info on 2.12.0 2006-02-25 22:31 edwards * README: Info on chroma version 2.12 2006-02-25 17:48 bjoo * lib/Makefile.am, lib/update/molecdyn/monomial/monomial_aggregate_w.cc, lib/update/molecdyn/monomial/monomial_w.h, lib/update/molecdyn/monomial/one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.h, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.cc, lib/update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.h, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.cc, lib/update/molecdyn/monomial/prec_logdet_ee_monomial_w.h, lib/update/molecdyn/monomial/two_flavor_monomial_w.h, tests/t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.ini.xml, tests/t_leapfrog/t_leapfrog.prec_2flav_clover_ee_oo.out.xml: Made EOPREC_CONSTDER monomial take clover but treat it as constdet. Added clover EE monomial 2006-02-25 14:47 edwards * lib/actions/gauge/gaugebcs/: gaugebc_factory.h, gaugebc_periodic.cc, gaugebc_periodic.h, gaugebc_schroedinger.cc, gaugebc_schroedinger.h, gaugebc_simple.cc, gaugebc_simple.h: Added doxygen comments. 2006-02-24 06:06 mcneile * tests/regres.pl: I am temporarilty removing the staggered test while we deal with the gauge config issue. 2006-02-23 16:00 edwards * lib/Makefile.am: Added inline_coulgauge and inline_gfix 2006-02-23 15:58 edwards * lib/meas/inline/: inline_aggregate.cc, gfix/gfix.h, gfix/inline_coulgauge.cc, gfix/inline_coulgauge.h, gfix/inline_gfix_aggregate.cc, gfix/inline_gfix_aggregate.h, smear/inline_stout_smear.cc: Added gauge fixing measurements. 2006-02-23 11:01 bjoo * NEWS: Oops in the NEws 2006-02-23 10:46 tag chroma2-12-0 2006-02-23 10:46 bjoo * NEWS: New NEWS 2006-02-23 10:45 bjoo * configure, configure.ac: Increased version number in configure.ac 2006-02-23 10:44 bjoo * NEWS, lib/meas/inline/hadron/inline_multi_propagator_w.cc, tests/chroma/hadron/propagator/unprec-zolo-ev-multi-v8.metric.xml: XML Magic in Multi qprop 2006-02-22 21:38 bjoo * lib/meas/inline/eig/inline_ritz_H_w.cc, lib/update/molecdyn/monomial/two_flavor_monomial_w.h, tests/chroma/eig/ritz_Hw-v1.ini.xml, tests/chroma/eig/ritz_Hw-v1.metric.xml, tests/chroma/eig/ritz_Hw-v1.out.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi-v8.ini.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi-v8.out.xml: Fixed XML hither and yon 2006-02-22 18:48 bjoo * lib/Makefile.am, lib/actions/ferm/fermacts/eigen_state.h, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.cc, lib/actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.h, lib/meas/inline/eig/inline_ritz_H_w.cc, lib/meas/inline/hadron/inline_multi_propagator_w.cc, lib/meas/inline/io/qio_read_obj_funcmap.cc, lib/meas/inline/io/qio_write_obj_funcmap.cc, lib/update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.cc, lib/util/ferm/eigeninfo.h, tests/regres.pl, tests/chroma/eig/regres.pl, tests/chroma/eig/ritz_Hw-v1.ini.xml, tests/chroma/eig/ritz_Hw-v1.metric.xml, tests/chroma/eig/ritz_Hw-v1.out.xml, tests/chroma/hadron/propagator/regres.pl, tests/chroma/hadron/propagator/unprec-ovlap-zolo4d-v9.out.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi-v8.ini.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi-v8.metric.xml, tests/chroma/hadron/propagator/unprec-zolo-ev-multi-v8.out.xml: Added new Zolotarev stuff with Ritz and Multi-mass and added regresssions for these 2006-02-22 11:27 streuer * lib/meas/inline/io/: qio_read_obj_funcmap.cc, qio_write_obj_funcmap.cc: Merged Makefile.ins and other local edits resulting from inline Ritz 2006-02-22 11:23 streuer * lib/util/ferm/eigeninfo.h: added data structure for eigenvectors/values 2006-02-22 11:22 streuer * lib/Makefile.am: Added Ritz stuff to Makefile.am 2006-02-22 11:09 streuer * lib/meas/inline/eig/: eig.h, inline_eig_aggregate.cc, inline_ritz_H_w.cc, inline_ritz_H_w.h: added first attempt to inline ritz measurement 2006-02-22 00:23 bjoo * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_multi_propagator_w.cc, inline_propagator_w.cc: Modified to really use state info 2006-02-21 23:36 tag chroma2-11-0 2006-02-21 23:36 edwards * aclocal.m4, configure: Induced changes. 2006-02-21 23:34 edwards * lib/Makefile.am: Added quark_displacement stuff. 2006-02-21 23:34 edwards * lib/meas/: sinks/pt_sink_smearing.cc, sinks/pt_sink_smearing.h, sinks/sh_sink_smearing.cc, sinks/sh_sink_smearing.h, sources/deriv_sh_source_const_w.cc, sources/deriv_sh_source_const_w.h, sources/pt_source_const.cc, sources/pt_source_const.h, sources/pt_source_smearing.cc, sources/pt_source_smearing.h, sources/sh_source_const.cc, sources/sh_source_const.h, sources/sh_source_smearing.cc, sources/sh_source_smearing.h, sources/source_const_aggregate.cc: Got rid of deriv_sh_source/sink stuff. Have generalized "displacements" in sources and sinks to be a factory "Displacement". The derivatives are just another displacement. 2006-02-21 23:32 edwards * NEWS: Info on 2.11.0 2006-02-21 23:30 edwards * configure.ac: Changed to 2.11.0 2006-02-21 23:29 edwards * tests/chroma/hadron/make_source/: source-displace.ini.xml, source-displace.out.xml: Updated tests. 2006-02-21 23:22 edwards * tests/chroma/hadron/sink_smear/: sink-displace.ini.xml, sink-displace.out.xml: Updated test 2006-02-21 23:13 edwards * tests/regres.pl: Fixed path 2006-02-21 22:27 edwards * lib/meas/smear/deriv_quark_displacement_w.cc: Fixed up deriv. for isign. 2006-02-21 22:27 edwards * lib/meas/smear/quark_displacement_aggregate.cc: Added no quark displacement 2006-02-21 22:27 edwards * lib/meas/smear/: no_quark_displacement.cc, no_quark_displacement.h: No quark displacement. 2006-02-21 22:24 edwards * tests/chroma/hadron/make_source/: deriv-source.ini.xml, deriv-source.metric.xml, deriv-source.out.xml, regres.pl, source-deriv.ini.xml, source-deriv.metric.xml, source-deriv.out.xml, source-displace.ini.xml, source-displace.metric.xml, source-displace.out.xml: Updated regression tests. 2006-02-21 22:23 edwards * tests/: chroma/hadron/sink_smear/regres.pl, chroma/hadron/sink_smear/sink-deriv.ini.xml, chroma/hadron/sink_smear/sink-deriv.metric.xml, chroma/hadron/sink_smear/sink-deriv.out.xml, chroma/hadron/sink_smear/sink-displace.ini.xml, chroma/hadron/sink_smear/sink-displace.metric.xml, chroma/hadron/sink_smear/sink-displace.out.xml, chroma/hadron/sink_smear/sink_smearing-v5.metric.xml, chroma/hadron/sink_smear/sink_smearing-v5.out.xml, regres.pl: New regression tests. 2006-02-21 10:43 mcneile * tests/regres.pl: I have added a test for the staggered spectrum code. 2006-02-21 10:10 mcneile * tests/spectrum_s/: regres.pl, spectrum_s.metric.xml: We are starting to put the staggered stuff into the regression testing framework. 2006-02-21 01:45 edwards * lib/meas/smear/: deriv_quark_displacement_w.cc, deriv_quark_displacement_w.h, quark_displacement.h, quark_displacement_aggregate.cc, quark_displacement_aggregate.h, quark_displacement_factory.h, simple_quark_displacement.cc, simple_quark_displacement.h: New displacement routines. 2006-02-20 18:19 egregory * tests/spectrum_s/spectrum_s_test_output.xml: test output for testing spectrum_s 2006-02-20 17:51 edwards * lib/meas/sources/deriv_sh_source_const_w.cc: Added missing template. 2006-02-20 16:32 edwards * lib/meas/sources/: deriv_sh_source_const_w.cc, deriv_sh_source_const_w.h: Grrh. Fixed more doxygen comments. 2006-02-20 16:20 edwards * lib/meas/sources/: deriv_sh_source_const_w.cc, deriv_sh_source_const_w.h: Fixed doxygen comments. 2006-02-20 15:43 edwards * tests/chroma/glue/wilslp/wilslp.metric.xml: New metric file. 2006-02-20 15:42 edwards * lib/meas/inline/glue/: inline_fuzwilp.cc, inline_fuzwilp.h: Added doxygen comments. 2006-02-20 15:42 edwards * lib/meas/sources/: deriv_sh_source_const_w.cc, deriv_sh_source_const_w.h: Fixed sources. 2006-02-20 15:41 edwards * tests/chroma/hadron/make_source/: deriv-source.ini.xml, deriv-source.metric.xml, deriv-source.out.xml, regres.pl: New derivative soruces. 2006-02-20 12:59 edwards * tests/chroma/hadron/make_source/deriv-source.ini.xml: New input file. 2006-02-20 12:50 edwards * lib/Makefile.am: Added deriv_sh_source_const.{h,cc} 2006-02-20 12:50 edwards * lib/meas/sources/: deriv_sh_source_const_w.cc, deriv_sh_source_const_w.h, source_const_aggregate.cc: Fixing derivative sources. 2006-02-20 12:38 edwards * tests/regres.pl: New regression tests. 2006-02-20 12:37 edwards * tests/chroma/glue/wilslp/: regres.pl, wilslp.ini.xml, wilslp.out.xml: New inputs and regression tests. I don't like the output format, however. Need to change. 2006-02-20 11:48 edwards * install_scripts/cygwin/config_chroma_parscalar-single.sh: New install file. 2006-02-20 09:50 egregory * tests/spectrum_s/spectrum_s.xml: changed the path to the test config t_nersc.cfg so it does not have top be copied. 2006-02-20 09:47 egregory * lib/meas/inline/hadron_s/util_compute_8_vectors_s.cc: added missing xml pop and changed the tag 2006-02-20 09:47 egregory * lib/meas/inline/hadron_s/util_compute_8_scalars_s.cc: added missing xml pop 2006-02-20 09:46 egregory * lib/meas/inline/hadron_s/util_compute_8_pions_s.cc: added a missing xml pop 2006-02-20 09:45 egregory * mainprogs/main/spectrum_s.cc: added xml_out.close() to try to fix the lack of carraige return at the end of the file. Didnt fix it. 2006-02-19 16:20 mcneile * mainprogs/main/Makefile.am: I have added spectrum_s to the programs that install 2006-02-19 00:22 edwards * lib/meas/sources/: deriv_sh_source_const_w.cc, deriv_sh_source_const_w.h: First version. 2006-02-17 07:46 bjoo * tests/t_leapfrog/t_leapfrog.prec_2flav_clover.out.xml: Replaced controlfile for prec 2flav clover 2006-02-16 21:10 tag chroma2-10-1 2006-02-16 21:10 edwards * NEWS: Info on 2.10.1 2006-02-16 21:07 edwards * lib/actions/ferm/qprop/prec_dwf_qprop_array_sse_w.cc: Added timings. 2006-02-16 21:05 edwards * tests/t_leapfrog/t_leapfrog.prec_2flav_clover.out.xml: Updated canonical output. 2006-02-16 19:13 edwards * lib/actions/ferm/fermacts/remez_stub.h: Improved diagnostic message. 2006-02-16 17:33 kostas * lib/actions/ferm/linop/polynomial_op.h: fixed some of the force bugs 2006-02-16 16:03 edwards * aclocal.m4, configure: Induced changes. 2006-02-16 16:02 edwards * lib/: chromabase.h, actions/ferm/fermacts/remez.h, actions/ferm/linop/clover_term_w.h, actions/ferm/linop/dslash_array_w.h, actions/ferm/linop/dslash_w.h, actions/ferm/linop/ovlap_contfrac5d_w.h, actions/ferm/qprop/dwf_qpropt_w.h, io/szin_io.cc, util/info/proginfo.cc: Pulled out chroma_config.h from chromabase.h . Moved the chroma_config.h include into only the files that require it. 2006-02-16 16:02 edwards * configure.ac: Changed to 2.10.1 . Hopefully, the chroma_config.h file has been pulled out of the major dependencies. Thus, all the lib won't recompile by changing the version number. 2006-02-16 15:18 edwards * lib/meas/eig/eig.h: Removed unused ifdefs 2006-02-16 14:03 bjoo * lib/actions/ferm/linop/clover_term_base_w.cc: Hopefully more optimal clover term 2006-02-15 22:09 tag chroma2-10-0 2006-02-15 22:09 edwards * tests/chroma/hadron/seqsource/seqsource-photon-v2.ini.xml: Changed name and momentum. 2006-02-15 22:05 edwards * aclocal.m4, configure: Induced changes. 2006-02-15 22:03 edwards * NEWS: Info on 2.10.0 2006-02-15 22:02 edwards * configure.ac: Changed to 2.10.0 2006-02-15 22:01 edwards * tests/hmc/: hmc.prec_wilson.ini.xml, hmc.prec_wilson.out.xml: Updated to new naming scheme. 2006-02-15 22:00 edwards * tests/t_leapfrog/: t_leapfrog.prec_1flav_dwf.ini.xml, t_leapfrog.prec_1flav_wilson.ini.xml, t_leapfrog.prec_1flav_wilson.out.xml, t_leapfrog.prec_2flav_clover.ini.xml, t_leapfrog.prec_contfrac.ini.xml, t_leapfrog.prec_dwf.ini.xml, t_leapfrog.prec_hasenbusch_wilson.ini.xml, t_leapfrog.prec_hasenbusch_wilson.out.xml, t_leapfrog.prec_parwilson.ini.xml, t_leapfrog.prec_polynomial_wilson.ini.xml, t_leapfrog.prec_wilson.ini.xml, t_leapfrog.prec_wilson.out.xml, t_leapfrog.unprec_clover.ini.xml, t_leapfrog.unprec_clover.out.xml, t_leapfrog.unprec_dwf.ini.xml, t_leapfrog.unprec_hasenbusch_wilson.ini.xml, t_leapfrog.unprec_hasenbusch_wilson.out.xml, t_leapfrog.unprec_wilson.ini.xml, t_leapfrog.unprec_wilson.out.xml: Updated monomials to new naming scheme. Updated the outputs. 2006-02-15 21:59 edwards * lib/update/molecdyn/monomial/: gauge_monomial.cc, gauge_monomial.h, prec_constdet_one_flavor_rat_monomial5d_w.cc, prec_constdet_one_flavor_rat_monomial5d_w.h, prec_constdet_one_flavor_rat_monomial_w.cc, prec_constdet_one_flavor_rat_monomial_w.h, prec_constdet_two_flavor_hasenbusch_monomial_w.cc, prec_constdet_two_flavor_hasenbusch_monomial_w.h, prec_constdet_two_flavor_monomial5d_w.cc, prec_constdet_two_flavor_monomial5d_w.h, prec_constdet_two_flavor_monomial_w.cc, prec_constdet_two_flavor_monomial_w.h, prec_constdet_two_flavor_polynomial_monomial_w.cc, prec_constdet_two_flavor_polyprec_monomial_w.cc, prec_logdet_two_flavor_monomial_w.cc, prec_logdet_two_flavor_monomial_w.h, unprec_one_flavor_rat_monomial5d_w.cc, unprec_one_flavor_rat_monomial5d_w.h, unprec_one_flavor_rat_monomial_w.cc, unprec_one_flavor_rat_monomial_w.h, unprec_two_flavor_hasenbusch_monomial_w.cc, unprec_two_flavor_hasenbusch_monomial_w.h, unprec_two_flavor_monomial5d_w.cc, unprec_two_flavor_monomial5d_w.h, unprec_two_flavor_monomial_w.cc, unprec_two_flavor_monomial_w.h: Changed runtime naming convention for monomials. Now the "name" is just for the concrete monomial which fires up via a factory the desired fermact. The fermact or gaugeact is no longer in the name. 2006-02-15 21:41 tag chroma2-9-2 2006-02-15 21:41 edwards * NEWS: Info on 2.9.2 2006-02-15 21:33 bjoo * tests/t_leapfrog/t_leapfrog.prec_1flav_dwf.metric.xml: ./t_leapfrog.prec_1flav_dwf.metric.xml 2006-02-15 21:29 bjoo * lib/prec_logdet_linop.h: Fixed this up as needed 2006-02-15 21:27 bjoo * lib/Makefile.am: Added logdet 2 flav monomials 2006-02-15 21:26 bjoo * lib/update/molecdyn/monomial/: monomial_aggregate_w.cc, monomial_w.h, prec_logdet_two_flavor_monomial_w.cc, prec_logdet_two_flavor_monomial_w.h, two_flavor_monomial_w.h: Added monomial for prec_2flav_logdet 2006-02-15 21:24 bjoo * lib/actions/ferm/linop/: clover_term_base_w.cc, clover_term_base_w.h, clover_term_qdp_w.cc, clover_term_qdp_w.h, prec_clover_linop_w.cc, prec_clover_linop_w.h: Reworked clover forces. Fixed triancntr. Made prec_clover_linop work 2006-02-15 21:23 bjoo * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_2flav_clover.ini.xml, t_leapfrog.prec_2flav_clover.metric.xml, t_leapfrog.prec_2flav_clover.out.xml: Prec clover leapfrog regression tests 2006-02-15 00:45 edwards * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_contfrac.ini.xml, t_leapfrog.prec_contfrac.metric.xml, t_leapfrog.prec_contfrac.out.xml, t_leapfrog.prec_contfrac.xml.ini: More regression tests. 2006-02-15 00:41 edwards * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_1flav_dwf.ini.xml, t_leapfrog.prec_1flav_dwf.metric.xml, t_leapfrog.prec_1flav_dwf.out.xml, t_leapfrog.prec_1flav_dwf.xml.ini, t_leapfrog.unprec_dwf.ini.xml, t_leapfrog.unprec_dwf.metric.xml, t_leapfrog.unprec_dwf.out.xml, t_leapfrog.unprec_dwf.xml.ini: More regression tests. 2006-02-15 00:27 edwards * lib/Makefile.am: Added gaugeacts_aggregate.{h,cc} 2006-02-15 00:26 tag chroma2-9-1 2006-02-15 00:26 edwards * NEWS: Info on 2.9.1 2006-02-15 00:24 edwards * lib/actions/gauge/gaugeacts/: gaugeacts_aggregate.cc, gaugeacts_aggregate.h: New aggegrates. 2006-02-14 23:53 edwards * lib/actions/ferm/fermacts/fermact_factory_w.h: Changed chromabase to fermact.h since that's the guy really needed. 2006-02-14 18:15 kostas * lib/actions/ferm/linop/polynomial_op.h: fixed derivative bugs 2006-02-14 18:05 kostas * lib/actions/ferm/linop/: polprec_op.h, polynomial_op.h: made deriv a const for polynomial operators 2006-02-14 10:51 edwards * tests/hmc/hmc.prec_wilson.metric.xml: Changed from checking deltaH to deltaKE and deltaPE 2006-02-13 20:52 edwards * lib/meas/hadron/seqsource_aggregate_w.cc: Added new seqsources. 2006-02-13 17:28 edwards * tests/chroma/hadron/seqsource/seqsource-photon-v2.ini.xml: Photon seq. src input file. 2006-02-13 17:27 edwards * lib/meas/hadron/photon_seqsrc_w.cc: Changed A0-PHOTON to PION-PHOTON. 2006-02-13 16:33 edwards * lib/meas/hadron/photon_seqsrc_w.cc: A much better way to setup the sink. 2006-02-13 15:47 edwards * lib/meas/hadron/: photon_seqsrc_w.cc, photon_seqsrc_w.h: First version. 2006-02-13 15:46 edwards * lib/Makefile.am: Added photon_seqsrc_w.{h,cc} 2006-02-13 10:38 edwards * tests/hmc/hmc.prec_wilson.metric.xml: Changed accuracy. 2006-02-12 23:50 edwards * tests/regres.pl: Added hmc regression tests. 2006-02-12 23:50 edwards * tests/hmc/: hmc.prec_wilson.ini.xml, hmc.prec_wilson.metric.xml, hmc.prec_wilson.out.xml, regres.pl: New regression tests. 2006-02-12 21:10 bjoo * lib/actions/ferm/linop/: clover_term_base_w.cc, clover_term_base_w.h: Factored out loop code 2006-02-12 20:31 bjoo * tests/t_leapfrog/: regres.pl, t_leapfrog.unprec_clover.ini.xml, t_leapfrog.unprec_clover.metric.xml, t_leapfrog.unprec_clover.out.xml: Added unprec clover regression test 2006-02-12 20:20 bjoo * lib/actions/ferm/linop/: clover_term_base_w.cc, clover_term_base_w.h, clover_term_qdp_w.cc, clover_term_qdp_w.h, lwldslash_base_w.cc, unprec_clover_linop_w.cc: Pseudofermionic clover force added. The even even part is still yet to come 2006-02-12 20:18 bjoo * lib/update/molecdyn/monomial/unprec_two_flavor_monomial_w.cc: Added Clover Monomial 2006-02-11 23:39 edwards * tests/chroma/hadron/seqsource/seqsource-derivmeson-v2.ini.xml: Start of new input file. 2006-02-11 23:39 edwards * lib/meas/hadron/derivmesonseqsrc_w.cc: Missed a registration. 2006-02-11 16:23 edwards * lib/meas/hadron/derivmesonseqsrc_w.cc: More doxygen comments. 2006-02-11 16:18 edwards * lib/meas/hadron/: derivmesonseqsrc_w.cc, derivmesonseqsrc_w.h: Finally all compiles. 2006-02-11 16:18 edwards * lib/util/ferm/: antisymtensor.cc, etensor.cc, symtensor.cc: Added sanity checks. 2006-02-11 12:23 edwards * lib/util/ferm/antisymtensor.cc: Changed comments. 2006-02-11 12:22 edwards * lib/util/ferm/symtensor.cc: Changed 1.0 to 1. 2006-02-11 12:22 edwards * lib/util/ferm/: etensor.cc, etensor.h: Antisym tensor used in E representation 2006-02-11 12:22 edwards * lib/Makefile.am: Added etensor.{h,cc} 2006-02-10 23:37 edwards * lib/meas/hadron/derivmesonseqsrc_w.cc: A few more piddly changes. 2006-02-10 21:34 edwards * lib/meas/hadron/: derivmesonseqsrc_w.cc, derivmesonseqsrc_w.h: Yeah, it at least compiles. 2006-02-09 23:21 edwards * tests/t_leapfrog/t_leapfrog.prec_polynomial_wilson.ini.xml: Changed input 2006-02-09 21:51 tag chroma2-9-0 2006-02-09 21:51 edwards * lib/meas/hadron/: derivmesonseqsrc_w.cc, derivmesonseqsrc_w.h: Start of derivative sequential sources. 2006-02-09 21:49 edwards * aclocal.m4, configure: Induced changes. 2006-02-09 21:48 edwards * NEWS: Info on 2.9.0 2006-02-09 21:48 edwards * configure.ac: Changed to 2.9.0. 2006-02-09 21:45 edwards * lib/update/molecdyn/monomial/: monomial_aggregate_w.cc, prec_constdet_two_flavor_polynomial_monomial_w.cc, prec_constdet_two_flavor_polynomial_monomial_w.h, prec_constdet_two_flavor_polyprec_monomial_w.cc, prec_constdet_two_flavor_polyprec_monomial_w.h, two_flavor_polynomial_monomial_w.h, two_flavor_polyprec_monomial_w.h: Added polynomial variants. Now compile and run but produces NaNs. 2006-02-09 21:45 edwards * lib/actions/ferm/: fermacts/fermacts_aggregate_w.cc, fermacts/poly_cheb_fermact_w.cc, fermacts/poly_cheb_fermact_w.h, linop/polynomial_op.h: Added polynomial variants. Now compile and run, but get NaNs 2006-02-09 21:44 edwards * lib/: polyfermact.h, polylinop.h: Polynomial variants. 2006-02-09 21:44 edwards * lib/Makefile.am: Added polynomial routines. 2006-02-09 21:42 edwards * tests/t_leapfrog/t_leapfrog.prec_polynomial_wilson.ini.xml: Sample input file 2006-02-09 17:29 edwards * lib/actions/ferm/fermacts/fermacts_aggregate_w.cc: Turned off poly stuff. 2006-02-09 17:29 edwards * lib/update/molecdyn/monomial/monomial_aggregate_w.cc: Turned off poly stuff 2006-02-09 17:26 edwards * lib/: update/molecdyn/monomial/monomial_aggregate_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_polynomial_monomial_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_polyprec_monomial_w.h, update/molecdyn/monomial/two_flavor_polynomial_monomial_w.h, update/molecdyn/monomial/two_flavor_polyprec_monomial_w.h, actions/ferm/fermacts/fermacts_aggregate_w.cc, actions/ferm/fermacts/poly_cheb_fermact_w.cc, actions/ferm/fermacts/poly_cheb_fermact_w.h: First versions. 2006-02-09 14:26 egregory * lib/Makefile.am: added entries for meas/inline/hadron_s/util_compute_8_scalars_s.cc meas/inline/hadron_s/util_compute_8_vectors_s.cc 2006-02-09 13:25 egregory * tests/spectrum_s/spectrum_s.xml: added gauge fixing params 2006-02-09 13:18 egregory * lib/meas/inline/hadron_s/util_compute_8_scalars_s.cc: new file for 8 tastes of scalar mesons 2006-02-09 13:17 egregory * lib/meas/inline/hadron_s/util_compute_8_vectors_s.cc: new file for 8 tastes of vectors 2006-02-09 13:14 egregory * lib/meas/hadron/ks_local_loops.cc: fixed bad calls to the kilcup version of loops 2006-02-09 13:08 egregory * lib/meas/hadron/vector_meson_s.h: changed gauge field u to constant in prototype 2006-02-09 13:08 egregory * lib/meas/hadron/stag_scalars_s.h: changed gauge field to const in the prototype 2006-02-09 13:03 egregory * lib/meas/inline/hadron_s/util_compute_singlet_ps.cc: formatting 2006-02-09 13:01 egregory * lib/meas/inline/hadron_s/util_compute_quark_prop_s.cc: got rid of extraneous diagnostic printf 2006-02-09 12:59 egregory * lib/meas/inline/hadron_s/util_compute_meson_s.h: added prototypes for scalar and vector meson calls. 2006-02-09 12:58 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.h: added gauge fixing parameters 2006-02-09 12:58 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: reorganized again. ensured props are computed before used ! added 8 tastes of scalars and vector mesons, as well as some gauge-fixing params in the input. did some general housecleaning. 2006-02-09 12:54 egregory * mainprogs/main/spectrum_s.cc: added coloumb gauge-fixing 2006-02-08 23:59 edwards * tests/chroma/hadron/seqsource/: seqsource-baryon-v1.out.xml, seqsource-meson-v1.out.xml: Updated regression tests putting j_decay and t_source back into PropSource_t xml writing. 2006-02-08 23:59 edwards * tests/chroma/hadron/building_blocks/bb-v2.out.xml: Updated regression output to reflect bug in NUCL_U_POL. 2006-02-08 23:50 edwards * lib/io/qprop_io.cc: Turned back on printing of j_decay and t_source in PropSource_t 2006-02-08 23:43 edwards * lib/meas/hadron/derivmesonseqsrc_w.cc: Hooked in more create functions. 2006-02-08 23:43 edwards * lib/meas/hadron/barseqsrc_w.cc: Replaced __func__ with string names since __func__ is now uninteresting. 2006-02-08 22:50 edwards * lib/Makefile.am: Added derivmesonseqsrc_w.{h,cc} 2006-02-08 22:50 edwards * lib/meas/hadron/: derivmesonseqsrc_w.cc, derivmesonseqsrc_w.h: Initial version that compiles. 2006-02-08 21:30 tag pre-7-chroma2-9-0 2006-02-08 21:30 edwards * lib/meas/hadron/: hadron_w.h, hadseqsrc_w.cc, seqsrc_funcmap_w.cc, seqsrc_funcmap_w.h: Obsolete and removed. 2006-02-08 21:25 edwards * lib/: io/qprop_io.cc, io/qprop_io.h, meas/hadron/barseqsrc_w.h, meas/hadron/derivmesonseqsrc_w.cc, meas/hadron/derivmesonseqsrc_w.h, meas/hadron/hadron_seqsource.cc, meas/hadron/hadron_seqsource.h, meas/hadron/mesonseqsrc_w.cc, meas/hadron/mesonseqsrc_w.h, meas/hadron/seqsource_aggregate_w.cc, meas/hadron/seqsource_aggregate_w.h, meas/hadron/seqsource_factory_w.h, meas/inline/hadron/inline_bar3ptfn_w.cc, meas/inline/hadron/inline_building_blocks_w.cc, meas/inline/hadron/inline_seqsource_w.cc: Major change in format of seqsource. Now is input driven and has its own input group. Moved away from funcmap to objfactory 2006-02-08 21:25 edwards * lib/meas/hadron/barseqsrc_w.cc: Major change in format of seqsource. Now is input driven and has its input. Bug fix in NUCL_U_POL 2006-02-08 21:24 edwards * lib/util/ferm/antisymtensor.cc: Changed init to integers 2006-02-08 21:23 edwards * lib/actions/ferm/: fermacts/fermacts_aggregate_w.cc, fermacts/unprec_w12_fermact_w.cc, fermacts/unprec_w12_fermact_w.h, linop/unprec_w12_linop_w.cc, linop/unprec_w12_linop_w.h: Added W12 action 2006-02-08 21:22 edwards * lib/actions/ferm/linop/unprec_hamberwu_linop_w.cc: Added doxygen comment. 2006-02-08 21:21 edwards * lib/Makefile.am: Added new hadron_sequential source factories and registration. Added unprec W12 action. 2006-02-08 21:19 edwards * tests/chroma/hadron/seqsource/: regres.pl, seqsource-v2.ini.xml, seqsource-v2.metric.xml, seqsource-v2.out.xml: Split off regression tests to a meson and baryon file. There is a bug fix in NUCL_U_POL that is now reflected in the change of the canonical test file. 2006-02-08 21:09 edwards * tests/chroma/hadron/seqsource/: seqsource-meson-v1.ini.xml, seqsource-meson-v1.metric.xml, seqsource-meson-v1.out.xml: Fixed test. 2006-02-08 21:02 edwards * tests/chroma/hadron/seqsource/: regres.pl, seqsource-baryon-v1.ini.xml, seqsource-baryon-v1.metric.xml, seqsource-baryon-v1.out.xml, seqsource-meson-v1.ini.xml, seqsource-meson-v1.metric.xml, seqsource-meson-v1.out.xml: New regression tests. 2006-02-07 06:55 egregory * lib/meas/hadron/loops_s.h: added checkpointing dump call 2006-02-07 06:54 egregory * lib/meas/hadron/ks_local_loops.h: fixed the prototypes to have bool argument for checkpointing measurements CV: ---------------------------------------------------------------------- CoVS: Enter Log. Lines beginning with `CVS:' are removed automaticall 2006-02-06 15:27 egregory * lib/meas/hadron/ks_local_loops.cc: fixed fill_volume_source function (is passed pointers for indicies now) and calls to g5 x 1 pseudoscalar loop with kilcup variance reduction and added a g5xg5 loop for testing purposes (disconnected diagram should be 0) 2006-02-06 15:24 egregory * lib/meas/hadron/: pseudoscalar_loops_s.cc, pseudoscalar_loops_s.h: added kilcup variance reduction for gamma5 x gamma5 loop 2006-02-06 14:05 kostas * lib/actions/ferm/linop/: polprec_op.h, polynomial_op.h: Initial versions of polynomial preconditioners 2006-02-06 13:15 egregory * lib/meas/inline/hadron_s/util_compute_meson_s.cc: removed diagnostic printfs 2006-02-06 13:13 egregory * lib/meas/inline/hadron_s/util_compute_singlet_ps.cc: minor changes 2006-02-06 13:11 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.h: some new input parameters, e.g.: loop_checkpoint 2006-02-06 13:10 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: changes mostly reflect prototype/argument changes for PS loops 2006-02-06 13:08 egregory * tests/spectrum_s/spectrum_s.xml: added some boolean parameters, but most importantly changes t_srce to 0 0 0 0 2006-02-04 11:48 edwards * lib/io/enum_io/: enum_cfgtype_io.cc, enum_coeffs_io.cc, enum_eigenvectype_io.cc, enum_fermtype_io.cc, enum_gaugeacttype_io.cc, enum_gaugebc_io.cc, enum_heatbathtype_io.cc, enum_inner_solver_type_io.cc, enum_invtype_io.cc, enum_md_integrator_type_io.cc, enum_proptype_io.cc, enum_qdpvolfmt_io.cc, enum_simplebctype_io.cc, enum_srcsnktype_io.cc, enum_stochsrc_io.cc, enum_wavetype_io.cc, enum_wvfkind_io.cc: Added doxygen comments. 2006-02-04 11:42 edwards * lib/io/enum_io/: enum_cfgtype_io.h, enum_coeffs_io.h, enum_eigenvectype_io.h, enum_fermtype_io.h, enum_gaugeacttype_io.h, enum_gaugebc_io.h, enum_heatbathtype_io.h, enum_inner_solver_type_io.h, enum_invtype_io.h, enum_md_integrator_type_io.h, enum_proptype_io.h, enum_qdpvolfmt_io.h, enum_quarkspintype_io.h, enum_simplebctype_io.h, enum_srcsnktype_io.h, enum_stochsrc_io.h, enum_wavetype_io.h, enum_wvfkind_io.h: Added doxygen comments. 2006-02-04 11:25 edwards * lib/io/enum_io/enum_type_map.h: Added doxygen comments. 2006-02-04 11:11 edwards * scripts/build.sh: Updated the script 2006-02-04 06:19 mcneile * mainprogs/tests/t_disc_loop_s.cc: I have macroed out a call to ks_loops. The arguments need to be updated. 2006-02-03 09:38 egregory * lib/meas/hadron/pions_s.h: changed gauge field to const in argument 2006-02-03 09:36 egregory * lib/Makefile.am: added entry for util_compute_8_pions_s.cc 2006-02-03 09:33 egregory * lib/meas/inline/hadron_s/util_compute_8_pions_s.cc: added new file for 8 pion tastes 2006-02-03 09:29 egregory * lib/meas/inline/hadron_s/util_compute_quark_prop_s.cc: removed extraneous printf 2006-02-03 09:26 egregory * lib/meas/inline/hadron_s/util_compute_meson_s.h: changes to accompany changes to util_compute_meson_s.cc 2006-02-03 09:26 egregory * lib/meas/inline/hadron_s/util_compute_meson_s.cc: added arguments to explicitly specify type of shift 2006-02-03 09:25 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: added call to 8 pseudoscalars 2006-02-02 13:45 edwards * lib/update/molecdyn/hmc/global_metropolis_accrej.cc: More doxygen 2006-02-02 13:44 edwards * lib/update/molecdyn/hmc/: global_metropolis_accrej.cc, global_metropolis_accrej.h: Added doxygen comments. 2006-02-02 13:39 edwards * lib/update/molecdyn/integrator/: integrator_aggregate.h, lcm_integrator_leaps.h, lcm_minimum_norm2_integrator.h, lcm_sexton_weingarten.h, lcm_sw_min_mixed.h: Added some doxygen comments. 2006-02-02 11:46 egregory * tests/spectrum_s/spectrum_s.xml: has new parameters 2006-02-02 11:44 egregory * lib/meas/hadron/stag_propShift_s.cc: fixed some bugs in the symmetric shifting. 2006-02-02 11:43 egregory * lib/meas/hadron/ks_local_loops.h: Added version w/o smearing arguments, to save memory. 2006-02-02 11:42 egregory * lib/meas/hadron/ks_local_loops.cc: Added the gaussian dilution schemes. 2006-02-02 11:29 egregory * lib/meas/inline/hadron_s/util_compute_singlet_ps.cc: some streamlining, and source-shift compatibility check. 2006-02-02 11:27 egregory * lib/meas/inline/hadron_s/util_compute_quark_prop_s.cc: added seperate fuzzing and non-fuzzing versions so can use less memory when not fuzzing. also checks compatability between source type and shift type. 2006-02-02 11:25 egregory * lib/meas/inline/hadron_s/util_compute_meson_s.cc: some printfs for debugging. have to remove these when fixed. 2006-02-02 11:23 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.h: added some new input params to cgo with changes to inline_spectrum_s.cc 2006-02-02 11:22 egregory * lib/meas/inline/hadron_s/inline_spectrum_s.cc: reorganized for better memory use and better clarity 2006-02-01 09:35 mcneile * lib/io/enum_io/enum_stochsrc_io.cc: Updated with Eric's enums. 2006-01-31 09:33 mcneile * lib/Makefile.am: I have added Eric's diluted gaussian code. 2006-01-31 09:31 mcneile * lib/meas/hadron/enum_loops_s.h: I have added more enums for Eric Gregory's diluted gaussian sources. 2006-01-31 09:29 mcneile * lib/meas/sources/: dilute_gauss_src_s.cc, dilute_gauss_src_s.h: Eric Gregory's code to dilute gaussian sources. This uses an older chroma style to that used for the dilute Z2 sources. 2006-01-29 00:23 edwards * lib/Makefile.am: Added antisym and symmetric tensor. 2006-01-29 00:21 edwards * lib/util/ferm/: antisymtensor.cc, antisymtensor.h, symtensor.cc, symtensor.h: New files. 2006-01-29 00:20 edwards * lib/util/ferm/gammasgn_w.cc: Put hidden data in private namespace. 2006-01-29 00:18 edwards * tests/chroma/hadron/propagator/: prec_clover-v9.out.xml, unprec_clover-v9.out.xml: Updated regression tests for change of conventions. 2006-01-26 15:04 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Rescale clover coefficient by aniso factor and also 1/2 due to conventions. 2006-01-25 11:50 edwards * lib/meas/inline/: inline_aggregate.cc, make_xml_file.cc: Removed dosisms. 2006-01-25 00:54 edwards * tests/regres.pl: New bb regression test. 2006-01-25 00:52 edwards * tests/chroma/hadron/building_blocks/: bb-v2.dat.xml, bb-v2.ini.xml, bb-v2.metric.xml, bb-v2.out.xml, regres.pl: New regression test. 2006-01-25 00:08 tag pre-6-chroma2-9-0 2006-01-25 00:08 edwards * mainprogs/main/hmc.cc: Added simple diagnostic output. 2006-01-20 13:46 bjoo * lib/actions/ferm/linop/clover_term_qdp_w.cc: Need for fixup hacks resolved. Turns out indices dont need to be transposed for gauge field access only in multi2d since gauge field layout is the same between SZIN and chroma. Apropriate changes made and hack warnings removed 2006-01-17 21:12 tag pre-5-chroma2-9-0 2006-01-17 21:12 bjoo * lib/actions/ferm/linop/clover_term_qdp_w.cc: clarified a comment 2006-01-17 21:07 bjoo * lib/actions/ferm/linop/clover_term_qdp_w.cc: Removed a line of debug info 2006-01-17 20:58 bjoo * tests/chroma/hadron/propagator/: prec_clover-v9.out.xml, unprec_clover-v9.out.xml: Updated regression test files to fit changes with new clover term. 2006-01-17 20:53 bjoo * lib/actions/ferm/: fermacts/clover_fermact_params_w.cc, linop/clover_term_base_w.h, linop/clover_term_qdp_w.cc, linop/clover_term_qdp_w.h: Hacked Clover until unprec Clover works 2006-01-17 17:03 edwards * lib/meas/hadron/baryon_w.cc: Comment change. 2006-01-17 11:01 bjoo * lib/: chromabase.h, fermact.h, actions/ferm/fermacts/prec_clover_fermact_w.cc, actions/ferm/fermacts/prec_clover_fermact_w.h, actions/ferm/fermacts/prec_dwf_fermact_base_array_w.h, actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.h, actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, actions/ferm/fermacts/prec_ovext_fermact_array_w.h, actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.h, actions/ferm/fermacts/prec_parwilson_fermact_w.cc, actions/ferm/fermacts/prec_parwilson_fermact_w.h, actions/ferm/fermacts/prec_wilson_fermact_w.cc, actions/ferm/fermacts/prec_wilson_fermact_w.h, actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.h, actions/ferm/qprop/prec_dwf_qprop_array_sse_w.h, update/molecdyn/monomial/one_flavor_rat_monomial_w.h, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial5d_w.h, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.cc, update/molecdyn/monomial/prec_constdet_one_flavor_rat_monomial_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_monomial5d_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_monomial_w.h, update/molecdyn/monomial/two_flavor_monomial5d_w.h, update/molecdyn/monomial/two_flavor_monomial_w.h: Rehashed Fermacts to have constDet and logDet. Rehashed Monomials to have constDet monomials use only constDet fermacts. 2006-01-16 00:23 bjoo * aclocal.m4: Autoconf fixup 2006-01-15 21:10 bjoo * lib/: Makefile.am, update/molecdyn/monomial/monomial_aggregate_w.cc, update/molecdyn/monomial/monomial_w.h, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/prec_constdet_two_flavor_hasenbusch_monomial_w.h, update/molecdyn/monomial/prec_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/prec_two_flavor_hasenbusch_monomial_w.h, update/molecdyn/monomial/two_flavor_hasenbusch_monomial_w.h: Moved prec hasenbusch to prec constdet hasenbusch 2006-01-15 19:58 bjoo * tests/t_leapfrog/t_leapfrog.prec_1flav_wilson.xml.ini: Ooops ... now removed 2006-01-15 19:56 bjoo * Makefile.am, lib/Makefile.am, mainprogs/main/Makefile.am, tests/regres.pl, tests/chroma/chroma_simple.xml.ini, tests/t_leapfrog/regres.pl: A big commit step 1 2006-01-15 19:33 bjoo * lib/update/molecdyn/monomial/: monomial_aggregate_w.cc, monomial_w.h, one_flavor_rat_monomial5d_w.h, one_flavor_rat_monomial_w.h, prec_constdet_one_flavor_rat_monomial5d_w.cc, prec_constdet_one_flavor_rat_monomial5d_w.h, prec_constdet_one_flavor_rat_monomial_w.cc, prec_constdet_one_flavor_rat_monomial_w.h, prec_constdet_two_flavor_monomial5d_w.cc, prec_constdet_two_flavor_monomial5d_w.h, prec_constdet_two_flavor_monomial_w.cc, prec_constdet_two_flavor_monomial_w.h, prec_one_flavor_rat_monomial5d_w.cc, prec_one_flavor_rat_monomial5d_w.h, prec_one_flavor_rat_monomial_w.cc, prec_one_flavor_rat_monomial_w.h, prec_two_flavor_monomial5d_w.cc, prec_two_flavor_monomial5d_w.h, prec_two_flavor_monomial_w.cc, prec_two_flavor_monomial_w.h, two_flavor_monomial5d_w.h, two_flavor_monomial_w.h: Moved prec_two_flavor to prec_constdet_two_flavor. Moved prec_one_flavor to prec_constdet_one_flavor 2006-01-15 16:09 bjoo * tests/t_leapfrog/: regres.pl, t_leapfrog.prec_1flav_wilson.ini.xml, t_leapfrog.prec_1flav_wilson.metric.xml, t_leapfrog.prec_1flav_wilson.out.xml: Added Preconditioned 1 flavour XML files and test case 2006-01-14 01:42 edwards * lib/update/molecdyn/monomial/: one_flavor_rat_monomial5d_w.h, prec_one_flavor_rat_monomial5d_w.cc, prec_one_flavor_rat_monomial5d_w.h, prec_two_flavor_monomial5d_w.cc, prec_two_flavor_monomial5d_w.h, two_flavor_monomial5d_w.h, unprec_one_flavor_rat_monomial5d_w.cc, unprec_one_flavor_rat_monomial5d_w.h, unprec_two_flavor_monomial5d_w.cc, unprec_two_flavor_monomial5d_w.h: Moved getX() and getXPV() and invert up to base class. 2006-01-14 01:07 tag pre-4-chroma2-9-0 2006-01-14 01:07 edwards * lib/update/molecdyn/monomial/: one_flavor_rat_monomial_w.h, prec_one_flavor_rat_monomial_w.cc, prec_one_flavor_rat_monomial_w.h, unprec_one_flavor_rat_monomial_w.cc, unprec_one_flavor_rat_monomial_w.h: Pulled getX() function to base class. 2006-01-14 00:56 edwards * lib/update/molecdyn/monomial/: prec_two_flavor_monomial_w.cc, prec_two_flavor_monomial_w.h, two_flavor_monomial_w.h, unprec_two_flavor_monomial_w.cc, unprec_two_flavor_monomial_w.h: Pulled getX() and invert() out of eoprec/unprec monom. and pushed up to base TwoFlavorMonomial class. 2006-01-14 00:22 tag pre-3-chroma2-9-0 2006-01-14 00:22 edwards * lib/Makefile.am: Added monomial param readers. 2006-01-14 00:22 edwards * lib/update/molecdyn/monomial/: one_flavor_rat_monomial5d_params_w.cc, one_flavor_rat_monomial5d_params_w.h, one_flavor_rat_monomial_params_w.cc, one_flavor_rat_monomial_params_w.h, prec_one_flavor_rat_monomial5d_w.cc, prec_one_flavor_rat_monomial5d_w.h, prec_one_flavor_rat_monomial_w.cc, prec_one_flavor_rat_monomial_w.h, prec_two_flavor_hasenbusch_monomial_w.cc, prec_two_flavor_hasenbusch_monomial_w.h, prec_two_flavor_monomial5d_w.cc, prec_two_flavor_monomial5d_w.h, prec_two_flavor_monomial_w.cc, prec_two_flavor_monomial_w.h, two_flavor_hasenbusch_monomial_params_w.cc, two_flavor_hasenbusch_monomial_params_w.h, two_flavor_monomial_params_w.cc, two_flavor_monomial_params_w.h, unprec_one_flavor_rat_monomial5d_w.cc, unprec_one_flavor_rat_monomial5d_w.h, unprec_one_flavor_rat_monomial_w.cc, unprec_one_flavor_rat_monomial_w.h, unprec_two_flavor_hasenbusch_monomial_w.cc, unprec_two_flavor_hasenbusch_monomial_w.h, unprec_two_flavor_monomial5d_w.cc, unprec_two_flavor_monomial5d_w.h, unprec_two_flavor_monomial_w.cc, unprec_two_flavor_monomial_w.h: Consolidated parameter reading into small units between unprec and prec variants. In the two-flavor monomial case, the params is shared between 4d and 5d as well. 2006-01-13 14:55 tag pre-2-chroma2-9-0 2006-01-13 14:55 edwards * install_scripts/jlab/build_some_k2.6.csh: Build stuff 2006-01-12 11:51 bjoo * lib/: Makefile.am, actions/ferm/fermacts/fermacts_aggregate_w.cc, actions/ferm/fermacts/fermacts_w.h, update/molecdyn/monomial/prec_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/prec_one_flavor_rat_monomial_w.cc, update/molecdyn/monomial/prec_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/prec_two_flavor_monomial5d_w.cc, update/molecdyn/monomial/prec_two_flavor_monomial_w.cc, update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/unprec_one_flavor_rat_monomial_w.cc, update/molecdyn/monomial/unprec_two_flavor_hasenbusch_monomial_w.cc, update/molecdyn/monomial/unprec_two_flavor_monomial5d_w.cc, update/molecdyn/monomial/unprec_two_flavor_monomial_w.cc: Merged in Roberts recent changes and disabled stouting 2006-01-12 00:45 edwards * lib/: fermact.h, lmdagm.h, actions/ferm/fermacts/asqtad_fermact_s.cc, actions/ferm/fermacts/asqtad_fermact_s.h, actions/ferm/fermacts/overlap_fermact_base_w.cc, actions/ferm/fermacts/overlap_fermact_base_w.h, actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.cc, actions/ferm/fermacts/ovlap_partfrac4d_fermact_w.h, actions/ferm/fermacts/prec_clover_fermact_w.cc, actions/ferm/fermacts/prec_clover_fermact_w.h, actions/ferm/fermacts/prec_dwf_fermact_base_array_w.h, actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/prec_ht_contfrac5d_fermact_array_w.h, actions/ferm/fermacts/prec_nef_fermact_array_w.cc, actions/ferm/fermacts/prec_ovext_fermact_array_w.cc, actions/ferm/fermacts/prec_ovext_fermact_array_w.h, actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/prec_ovlap_contfrac5d_fermact_array_w.h, actions/ferm/fermacts/prec_parwilson_fermact_w.cc, actions/ferm/fermacts/prec_parwilson_fermact_w.h, actions/ferm/fermacts/prec_stout_fermact_array_w.h, actions/ferm/fermacts/prec_stout_fermact_w.h, actions/ferm/fermacts/prec_wilson_fermact_w.cc, actions/ferm/fermacts/prec_wilson_fermact_w.h, actions/ferm/fermacts/stag_fermact_s.h, actions/ferm/fermacts/unprec_clover_fermact_w.cc, actions/ferm/fermacts/unprec_clover_fermact_w.h, actions/ferm/fermacts/unprec_dwf_fermact_base_array_w.h, actions/ferm/fermacts/unprec_dwftransf_fermact_w.cc, actions/ferm/fermacts/unprec_dwftransf_fermact_w.h, actions/ferm/fermacts/unprec_hamberwu_fermact_w.cc, actions/ferm/fermacts/unprec_hamberwu_fermact_w.h, actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/unprec_ht_contfrac5d_fermact_array_w.h, actions/ferm/fermacts/unprec_ovext_fermact_array_w.cc, actions/ferm/fermacts/unprec_ovext_fermact_array_w.h, actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.cc, actions/ferm/fermacts/unprec_ovlap_contfrac5d_fermact_array_w.h, actions/ferm/fermacts/unprec_parwilson_fermact_w.cc, actions/ferm/fermacts/unprec_parwilson_fermact_w.h, actions/ferm/fermacts/unprec_stout_fermact_array_w.h, actions/ferm/fermacts/unprec_stout_fermact_w.h, actions/ferm/fermacts/unprec_wilson_fermact_w.cc, actions/ferm/fermacts/unprec_wilson_fermact_w.h, actions/ferm/linop/asqtad_mdagm_s.h, actions/ferm/linop/lmdagm.h, actions/ferm/linop/lovddag_double_pass_w.h, actions/ferm/linop/lovddag_w.h, actions/ferm/linop/lovlapms_w.h, meas/inline/eig/inline_eigbnds.cc, update/molecdyn/monomial/prec_one_flavor_rat_monomial5d_w.cc, update/molecdyn/monomial/unprec_one_flavor_rat_monomial5d_w.cc: A refactoring. Promoted lmdagm to be (finally) a default implementation for all the lMdagM() functions within the fermacts. Changed the lMdagM() fermact calls to a covariant return of DiffLinearOperator<> . This critter now knows how to take a derivative of its held op. Removed all the lMdagM() functions in the derived/concrete fermions. Promoted the overlap lmdagm-ish guys to DiffLinearOperator - this is necessary for HMC. 2006-01-12 00:41 edwards * lib/Makefile.am: Moved lmdagm to chroma/lib 2006-01-09 17:37 tag pre-1-chroma-2-9 2006-01-09 17:37 bjoo * aclocal.m4, lib/Makefile.am, lib/eo_prec_linop.h, lib/fermact.h, lib/linearop.h, lib/prec_constdet_linop.h, lib/prec_logdet_linop.h, lib/actions/ferm/linop/prec_clover_linop_w.h, lib/actions/ferm/linop/prec_dwf_linop_array_w.cc, lib/actions/ferm/linop/prec_dwf_linop_array_w.h, lib/actions/ferm/linop/prec_dwflike_linop_base_array_w.h, lib/actions/ferm/linop/prec_ht_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/prec_ht_contfrac5d_linop_array_w.h, lib/actions/ferm/linop/prec_nef_general_linop_array_w.cc, lib/actions/ferm/linop/prec_nef_general_linop_array_w.h, lib/actions/ferm/linop/prec_ovdwf_linop_array_w.h, lib/actions/ferm/linop/prec_ovext_linop_array_w.cc, lib/actions/ferm/linop/prec_ovext_linop_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_base_array_w.cc, lib/actions/ferm/linop/prec_ovlap_contfrac5d_linop_base_array_w.h, lib/actions/ferm/linop/prec_ovlap_contfrac5d_pv_linop_array_w.h, lib/actions/ferm/linop/prec_parwilson_linop_w.h, lib/actions/ferm/linop/prec_wilson_linop_w.cc, lib/actions/ferm/linop/prec_wilson_linop_w.h, lib/actions/ferm/linop/unprec_pdwf4d_linop_w.h, lib/actions/ferm/linop/unprec_ppdwf4d_linop_w.h, tests/chroma/hadron/building_blocks/bb-v2.dat.xml: Broke out Even odd preconditioning for the now into a separate eo_prec linop.h also created prec_constdet_linop.h and prec_logdet_linop.h and reworked the linear operators. Fermacts and monomials next 2006-01-06 15:13 tag chroma2-8-3 2006-01-06 15:13 edwards * NEWS: Info on 2.8.3 2006-01-05 11:34 kostas * lib/meas/hadron/: barspinmat_w.cc, barspinmat_w.h: slipped spin up to spin down for the negative parity mixed projector 2006-01-04 15:24 mcneile * scripts/: makemake_chroma.sh, makemake_qdp.sh, makemake_qmp.sh: makemake.sh for the chroma qdp++ and qmp modules. Each one of these files was a script in the subdirectory chroma qdp++ or qmp 2006-01-03 22:39 edwards * other_libs/intel_sse_wilson_dslash/: aclocal.m4, configure: Induced changes. 2006-01-03 22:18 tag chroma2-8-2 2006-01-03 22:18 edwards * NEWS: Info on 2.8.2 2006-01-03 22:17 edwards * tests/chroma/hadron/propagator/regres.pl: Turn clover tests back on. 2006-01-03 22:15 edwards * aclocal.m4, configure: Induced changes. 2006-01-03 22:15 edwards * lib/Makefile.am: Turned clover back on. 2006-01-03 22:10 edwards * lib/actions/ferm/fermacts/fermacts_aggregate_w.cc: Turn clover back on. 2006-01-03 22:09 edwards * lib/actions/ferm/linop/clover_term_base_w.h: Added missing abstract func defs (here, I was missing the "=0" on choles and cholesDet. 2006-01-03 22:09 edwards * lib/actions/ferm/linop/: clover_term_qdp_w.cc, clover_term_qdp_w.h: Added default constructor. 2006-01-03 16:18 tag chroma2-8-1 2006-01-03 16:18 edwards * mainprogs/main/Makefile.am: Rearranged chroma and hmc builds. 2006-01-03 15:47 edwards * NEWS: Info on 2.8.1 2006-01-03 10:57 bjoo * other_libs/intel_sse_wilson_dslash/src/parscalar/: 32bit/dslash/sse_su3dslash_w.c, 64bit/dslash/sse_su3dslash_w.c: Refined lattice size checks in parscalar code to allow 1 in the x direction for single node - fake parscalar - builds 2006-01-03 09:45 bjoo * tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.metric.xml: Oops forgot to add this metric 2006-01-03 09:28 bjoo * tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.out.xml: Oops should have added this before 2006-01-03 00:50 bjoo * Makefile.am, configure, configure.ac: Autoconf magic to locate xmldiff 2006-01-03 00:49 bjoo * scripts/run_chroma_xmldiff.pl: Do It 2006-01-03 00:03 bjoo * tests/: chroma/hadron/propagator/regres.pl, t_leapfrog/regres.pl: Fixed the regression test script - it was my own fault - I broke it this morning 2006-01-02 23:02 bjoo * lib/Makefile.am, lib/actions/ferm/fermacts/fermacts_aggregate_w.cc, lib/actions/ferm/linop/clover_term_base_w.h, scripts/run_chroma_xmldiff.pl, tests/t_leapfrog/t_leapfrog.unprec_hasenbusch_wilson.ini.xml, tests/t_leapfrog/t_leapfrog.unprec_wilson.xml.ini: Disabled Clover. Code now builds. I can run individual regressions manually, but make xcheck always fails. I dunno why 2006-01-02 15:50 bjoo * lib/update/molecdyn/monomial/: monomial_aggregate_w.cc, monomial_w.h, prec_two_flavor_hasenbusch_monomial_w.cc, prec_two_flavor_hasenbusch_monomial_w.h, two_flavor_hasenbusch_monomial_w.h: Added 4D Wilson Type Unprec and EvenOdd Prec monomials 2006-01-02 15:49 bjoo * tests/t_leapfrog/: t_leapfrog.prec_hasenbusch_wilson.ini.xml, t_leapfrog.prec_hasenbusch_wilson.metric.xml, t_leapfrog.prec_hasenbusch_wilson.out.xml: Input output and metric files for even-odd prec hasenbuschery 2006-01-02 15:23 bjoo * lib/update/molecdyn/monomial/: monomial_aggregate_w.cc, monomial_w.h, prec_two_flavor_monomial_w.h, two_flavor_hasenbusch_monomial_w.h, two_flavor_monomial_w.h, unprec_two_flavor_hasenbusch_monomial_w.cc, unprec_two_flavor_hasenbusch_monomial_w.h, unprec_two_flavor_monomial_w.cc, unprec_two_flavor_monomial_w.h: Added unpreconditioned Hasenbusch Monomial 2006-01-02 15:19 bjoo * tests/t_leapfrog/: t_leapfrog.unprec_wilson.ini.xml, t_leapfrog.unprec_wilson.metric.xml, t_leapfrog.unprec_wilson.out.xml: Added regression input, output and metric for unprec wilson. Removed old unprec wilson xml file as it didnt work 2006-01-01 00:16 tag chroma2-8-0 2006-01-01 00:16 edwards * configure: Induced changes. 2006-01-01 00:15 edwards * aclocal.m4: INduced changes. 2006-01-01 00:14 edwards * configure.ac: Changed to 2.8.0 2006-01-01 00:14 edwards * NEWS: Info on 2.8.0 2006-01-01 00:12 edwards * docs/notes/N_N_5d_ov.tex: Removed stuff 2006-01-01 00:12 edwards * lib/actions/ferm/: fermacts/fermacts_aggregate_w.cc, linop/clover_term_base_w.cc, linop/clover_term_base_w.h, linop/clover_term_qdp_w.cc, linop/clover_term_qdp_w.h, linop/prec_clover_linop_w.cc, linop/prec_clover_linop_w.h: Added clover. 2006-01-01 00:12 edwards * tests/t_precact/t_precact.clover.ini.xml: New clover tests. 2006-01-01 00:11 edwards * tests/chroma/hadron/propagator/: prec_clover-v9.metric.xml, regres.pl, unprec_clover-v9.metric.xml: Added clover regression tests. 2006-01-01 00:09 edwards * tests/chroma/hadron/propagator/: prec_clover-v9.ini.xml, prec_clover-v9.out.xml, unprec_clover-v9.ini.xml, unprec_clover-v9.out.xml: New regression tests 2005-12-30 15:44 kostas * lib/Makefile.am, mainprogs/main/Makefile.am, mainprogs/tests/Makefile.am: fixed automake stuff for altivec 2005-12-30 15:28 kostas * aclocal.m4, configure, configure.ac, lib/chroma_config_internal.h.in, lib/actions/ferm/qprop/dwf_qpropt_w.h, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.cc, lib/actions/ferm/qprop/prec_dwf_qprop_array_altivec_w.h, other_libs/Makefile.am: added altivec dwf cg inverter. This is a modification of A. Pochinsky's SSE DWF CG 2005-12-30 12:13 bjoo * docs/notes/partfrac5D.tex: Removed partfrac5D.tex 2005-12-29 00:43 edwards * aclocal.m4, configure: Induced changes. 2005-12-29 00:40 edwards * mainprogs/tests/: t_precact.cc, t_precact_4d.cc, t_precact_5d.cc: Split old t_precact.cc into a separate 4d and 5d version. 2005-12-29 00:40 edwards * mainprogs/tests/Makefile.am: Moved t_precact.cc to a new t_precact_4d.cc and the newer named t_precact_5d.cc 2005-12-29 00:37 edwards * lib/actions/ferm/linop/: clover_term_qdp_w.cc, clover_term_qdp_w.h, prec_clover_linop_w.cc, unprec_clover_linop_w.cc: Several fixes. The derivative is not working yet. 2005-12-29 00:36 edwards * lib/actions/ferm/fermacts/unprec_clover_fermact_w.h: Added doxygen comment. 2005-12-29 00:36 edwards * lib/actions/ferm/fermacts/: prec_clover_fermact_w.cc, prec_clover_fermact_w.h: Some fixes to get working. 2005-12-28 22:46 kostas * lib/io/writeszin.cc: fixed writeSzinTrunc precision bug 2005-12-27 20:33 kostas * tests/chroma/hadron/qqqNucNuc/: qqqNucNuc-v1.ini.xml, qqqNucNuc-v1.out.xml: sample xml input for qqqNucNuc 2005-12-27 16:36 kostas * lib/meas/inline/hadron/: inline_hadron_aggregate.cc, inline_qqqNucNuc_w.cc, inline_qqqNucNuc_w.h: implemented named object stuff in qqqNucNuc 2005-12-27 15:41 kostas * aclocal.m4, lib/Makefile.am, lib/meas/hadron/hadron_w.h, lib/meas/hadron/qqbar_w.cc, lib/meas/hadron/qqbar_w.h, lib/meas/hadron/qqq_w.cc, lib/meas/hadron/qqq_w.h, lib/meas/inline/hadron/inline_qqqNucNuc_w.cc, lib/meas/inline/hadron/inline_qqqNucNuc_w.h: added NPLQCD code 2005-12-27 15:38 edwards * tests/chroma/hadron/: spectrum/spectrum-v12.metric.xml, spectrumOct/spectrumOct-v11.metric.xml: Weakened accuracy tests. 2005-12-27 15:32 tag chroma2-7-4 2005-12-27 15:32 edwards * NEWS: INfo on 2.7.4 2005-12-26 16:03 edwards * tests/chroma/hadron/mres/mres-v1.metric.xml: Slightly weakened metric tests. 2005-12-26 15:25 edwards * tests/chroma/hadron/mres/: mres-v1.ini.xml, mres-v1.out.xml: Updated tests. 2005-12-26 15:19 edwards * lib/meas/hadron/barhqlq_w.cc: Fixed a call of lambdaNaive2pt. Also multiply back in goofy factor of 4 normalization in CgmNR usage. 2005-12-25 13:43 tag chroma2-7-3 2005-12-25 13:43 edwards * NEWS: Info on 2.7.3 2005-12-25 13:41 edwards * tests/: regres.pl, chroma/smear/link_smear/link_smear.metric.xml, chroma/smear/link_smear/regres.pl: Added link smearing regression. 2005-12-25 13:29 edwards * tests/: regres.pl, chroma/hadron/mres/mres-v1.ini.xml, chroma/hadron/mres/mres-v1.metric.xml, chroma/hadron/mres/mres-v1.out.xml, chroma/hadron/mres/regres.pl: Now have mres regression tests. 2005-12-25 13:22 edwards * tests/chroma/hadron/: propagator/prec_wilson-v9.ferm.ini.xml, propagator/prec_wilson-v9.ferm.out.xml, qqbar/qqbar-v4.ini.xml, qqbar/qqbar-v4.out.xml, qqq/qqq-v4.ini.xml, qqq/qqq-v4.out.xml, sink_smear/sink_smearing-v5.ini.xml, sink_smear/sink_smearing-v5.out.xml: Switched from dirichlet to anit-per. BC in time. 2005-12-25 13:18 edwards * tests/chroma/hadron/: spectrum/spectrum-v12.ini.xml, spectrum/spectrum-v12.out.xml, spectrumOct/spectrumOct-v11.ini.xml, spectrumOct/spectrumOct-v11.out.xml: Changed from dirichlet to anti-periodic BC in time. 2005-12-25 01:51 tag chroma2-7-2 2005-12-25 01:51 edwards * tests/chroma/hadron/spectrumOct/regres.pl: Fixed directory of tests. 2005-12-25 00:43 edwards * NEWS: Info on 2.7.2 2005-12-25 00:41 edwards * lib/meas/hadron/barhqlq_w.cc: Updated to use new baryon spin mats. Abstracted out functions. 2005-12-25 00:08 edwards * lib/meas/inline/hadron/: inline_spectrumOct_w.cc, inline_spectrumOct_w.h, inline_spectrum_w.cc: Updated for new output. 2005-12-25 00:08 edwards * tests/: regres.pl, chroma/hadron/spectrumOct/spectrumOct-v11.metric.xml, chroma/hadron/spectrumOct/spectrumOct-v11.out.xml: New regression tests. 2005-12-24 23:33 edwards * tests/chroma/hadron/spectrumOct/: regres.pl, spectrumOct-v11.ini.xml, spectrumOct-v11.metric.xml, spectrumOct-v11.out.xml: Added spectrumOct tests. 2005-12-24 23:32 edwards * tests/chroma/hadron/spectrum/spectrum-v12.out.xml: Updated 2005-12-24 16:42 edwards * tests/chroma/hadron/spectrum/: spectrum-v12.metric.xml, spectrum-v12.out.xml: Added negative parity. 2005-12-24 16:39 edwards * lib/meas/hadron/baryon_w.cc: Added negative parity as output. 2005-12-24 16:20 edwards * lib/meas/hadron/: barseqsrc_w.cc, barspinmat_w.cc, barspinmat_w.h, baryon_w.cc: Added new barspinmatrices . This is the new home of all the funky baryon spin matrices. Moved barseqsrc and baryon over to the new format. 2005-12-24 16:18 edwards * lib/Makefile.am: Added barspinmat_w.{h,cc} 2005-12-24 16:18 edwards * tests/chroma/hadron/seqsource/seqsource-v2.out.xml: Changed regression output to match new code output. NOTE: there is a normalization change in the delta code. 2005-12-24 15:53 edwards * tests/chroma/hadron/spectrum/spectrum-v12.out.xml: Updated regression tests. 2005-12-24 11:31 edwards * scripts/run_chroma_xmldiff.pl: Moved list of regression dirs to chroma/tests/regres.pl . 2005-12-24 11:30 edwards * tests/regres.pl: New top level regression dir. 2005-12-24 11:16 edwards * scripts/run_chroma_xmldiff.pl: Added missing comma in do_list. 2005-12-23 19:44 edwards * tests/chroma/hadron/spectrum/spectrum-v12.metric.xml: Extended tests. 2005-12-23 19:36 edwards * tests/chroma/hadron/spectrum/: regres.pl, spectrum.dat.xml: New regression test. 2005-12-23 19:36 edwards * scripts/run_chroma_xmldiff.pl: Added spectrum regression test 2005-12-23 19:34 edwards * tests/chroma/hadron/spectrum/: spectrum-v12.ini.xml, spectrum-v12.metric.xml, spectrum-v12.out.xml, spectrum.dat.xml: New regression tests 2005-12-22 17:26 bjoo * lib/actions/ferm/linop/lwldslash_array_pab_w.h: Fixed Kostas Unresolved Symbol Problem 2005-12-21 16:56 kostas * lib/meas/hadron/barseqsrc_w.cc: added the XIXI axial charge source 2005-12-21 11:18 edwards * lib/meas/hadron/barseqsrc_w.cc: Rearranged where the delta stuff resides 2005-12-21 10:38 kostas * lib/actions/ferm/qprop/quarkprop4_w.cc: corrected a minus sign when doing the lower componenets 2005-12-21 10:37 kostas * lib/meas/hadron/barseqsrc_w.cc: added negative parity sources 2005-12-21 09:50 kostas * lib/actions/ferm/linop/lwldslash_w_pab.cc: corrected a typo bug 2005-12-21 00:17 edwards * lib/meas/hadron/barseqsrc_w.cc: Simplified nucl cases to construct standard Cg5 and T terms to feed to a generic U and D insertion calculation. 2005-12-21 00:11 edwards * tests/chroma/hadron/seqsource/: seqsource-v2.ini.xml, seqsource-v2.metric.xml, seqsource-v2.out.xml: Added NUCL_PATCH_MIXED_NONREL 2005-12-20 22:42 tag chroma2-7-1 2005-12-20 22:42 edwards * NEWS: Info on 2.7.1 2005-12-20 15:37 edwards * tests/chroma/hadron/seqsource/: seqsource-v2.ini.xml, seqsource-v2.metric.xml, seqsource-v2.out.xml: Updated regression test. Now tests all baryon seqsources. 2005-12-20 15:10 edwards * tests/purgaug/: purgaug.metric.xml, regres.pl: More tests. 2005-12-20 14:32 edwards * scripts/build.sh: Put in link check. Turned on default mail. 2005-12-20 14:30 edwards * lib/actions/ferm/linop/lwldslash_w.cc: Added missing default (empty) constructor. 2005-12-20 14:23 edwards * lib/io/writeszin.cc: Now support case of t_end < t_start. This means walking off the lattice, so no now the code appropriately mods within the boundaries. 2005-12-20 14:23 edwards * tests/chroma/io/szin_write_obj/: szin_write_obj.ini.xml, szin_write_obj.out.xml: Update tests. 2005-12-20 10:48 edwards * scripts/link.pl: Added link script 2005-12-19 23:09 edwards * scripts/build.sh: Short term changes. 2005-12-19 22:22 edwards * scripts/run_chroma_xmldiff.pl: Added fixing of absolute paths. 2005-12-19 21:22 edwards * scripts/run_chroma_xmldiff.pl: Little changes. 2005-12-19 21:21 edwards * Makefile.am, mainprogs/tests/Makefile.am: Moved xcheck to top level Makefile.am 2005-12-19 15:01 edwards * mainprogs/tests/Makefile.am: Changed args for xcheck. Need to add staggered tests back into the regression suite. 2005-12-18 23:29 tag chroma2-7-0 2005-12-18 23:29 edwards * mainprogs/tests/Makefile.am: MOved t_leapfrog to bin programs. 2005-12-18 23:27 edwards * scripts/run_chroma_xmldiff.pl: Uncommented out tests 2005-12-18 21:26 edwards * lib/actions/ferm/linop/clover_term_qdp_w.cc: Commented out for the moment. 2005-12-18 18:56 edwards * tests/: chroma/hadron/make_source/dilute.metric.xml, chroma/hadron/make_source/make_source-v6.metric.xml, chroma/hadron/seqsource/seqsource-v2.metric.xml, stoch_meson/stoch_meson.eo.ini.xml: New regression tests. 2005-12-18 18:54 edwards * scripts/run_chroma_xmldiff.pl: New regression test system. 2005-12-18 18:54 edwards * NEWS: Info on 2.7.0 2005-12-18 18:53 edwards * lib/actions/ferm/: fermacts/fermacts_aggregate_w.cc, linop/chlclovms_w.b.cc, linop/choles.cc, linop/clover_term_base_w.cc, linop/clover_term_base_w.h, linop/clover_term_qdp_w.cc, linop/clover_term_qdp_w.h, linop/clover_term_w.h, linop/lclovmpsim_w.cc, linop/lwldslash_array_pab_w.cc, linop/lwldslash_array_pab_w.h, linop/lwldslash_array_sse_w.cc, linop/lwldslash_array_sse_w.h, linop/lwldslash_array_w.cc, linop/lwldslash_array_w.h, linop/lwldslash_base_array_w.cc, linop/lwldslash_base_array_w.h, linop/lwldslash_base_w.cc, linop/lwldslash_base_w.h, linop/lwldslash_w.cc, linop/lwldslash_w.h, linop/lwldslash_w_pab.cc, linop/lwldslash_w_pab.h, linop/lwldslash_w_sse.cc, linop/lwldslash_w_sse.h, linop/makclov_w.cc, linop/prec_clover_linop_w.cc, linop/prec_clover_linop_w.h, linop/prec_dwf_linop_array_w.cc, linop/prec_wilson_linop_w.cc, linop/unprec_clover_linop_w.cc, linop/unprec_clover_linop_w.h, linop/unprec_dwf_linop_array_w.cc, linop/unprec_wilson_linop_w.cc, linop/unprec_wilson_linop_w.h: Overhauled aniso support. Move the init'ing of gauge fields down in the Wilson and WilsonArray dslashes. Start of real clover support. Removed old clover files. New regression test support. 2005-12-18 18:51 edwards * tests/: chroma/hadron/make_source/regres.pl, chroma/hadron/propagator/prec_dwf-v9.m