CHROMA File List

Here is a list of all files with brief descriptions:
abs_hamiltonian.h [code]Abstract Hamiltonian
abs_hmc.h [code]Abstract HMC trajectory Using the new structure
abs_inline_measurement.h [code]Abstract inline measurements
abs_inline_measurement_factory.h [code]Inline measurement factory
abs_integrator.h [code]Integrators
abs_monomial.h [code]Monomials - gauge action or fermion binlinear contributions for HMC
actions.h [code]Include all files related to actions
aniso_io.cc [code]Anisotropy parameters
aniso_io.h [code]Anisotropy parameters
aniso_spectrum_gaugeact.cc [code]Anisotropic gaugeact useful for spectrum from hep-lat/9911003
aniso_spectrum_gaugeact.h [code]Anisotropic gaugeact useful for spectrum from hep-lat/9911003
aniso_sym_gaugeact_params.cc [code]Anisotropic gaugeact useful for spectrum from hep-lat/9911003
aniso_sym_gaugeact_params.h [code]Params for Anisotropic Symanzik Gauge Action
aniso_sym_shared_functions.cc [code]
aniso_sym_shared_functions.h [code]
aniso_sym_spatial_gaugeact.cc [code]Anisotropic gaugeact useful for spectrum from hep-lat/9911003
aniso_sym_spatial_gaugeact.h [code]Spatial part of Tree level LW action
aniso_sym_temporal_gaugeact.cc [code]Temporal part of Anisotropic Tree leve LW gauge action
aniso_sym_temporal_gaugeact.h [code]Temporal Part of Tree Level LW gauge action
antisymtensor.cc [code]Compute anti-symmetric tensors
antisymtensor.h [code]Compute anti-symmetric tensors
ape_link_smearing.cc [code]APE link smearing
ape_link_smearing.h [code]APE link smearing
ape_smear.cc [code]APE-smearing of the gauge configuration
ape_smear.h [code]
asq_dsl_s.cc [code]
asq_dsl_s.h [code]The "asq" or "asqtad" dslash operator D'
asqtad_cps_wrapper_qprop.cc [code]
asqtad_cps_wrapper_qprop.h [code]Propagator solver for an even-odd non-preconditioned fermion operator
asqtad_dslash.h [code]Include possibly optimized Asqtad dslash
asqtad_fermact_params_s.cc [code]Asqtad fermion action parameters
asqtad_fermact_params_s.h [code]AsqTad fermion action parameters
asqtad_fermact_s.cc [code]Asqtad staggered fermion action
asqtad_fermact_s.h [code]Asqtad staggered fermion action
asqtad_linop_s.cc [code]Unpreconditioned Asqtad linear operator
asqtad_linop_s.h [code]
asqtad_mdagm_s.cc [code]Unpreconditioned Wilson linear operator
asqtad_mdagm_s.h [code]Unpreconditioned Wilson fermion linear operator
asqtad_qprop.cc [code]Propagator solver for an even-odd non-preconditioned fermion operator
asqtad_qprop.h [code]Asqtad propagator wrapper
asqtad_state.h [code]Asqtad state
avp_altivecf_solver.cc [code]DWF/Bluegene altivec solver
avp_altivecf_solver.h [code]DWF/Bluegene altivec solver
avp_bgld_solver.cc [code]DWF/Bluegene double-prec solver
avp_bgld_solver.h [code]DWF/Bluegene double-prec solver
avp_bglf_solver.cc [code]DWF/Bluegene single-prec solver
avp_bglf_solver.h [code]DWF/Bluegene single-prec solver
avp_inverter_interface.cc [code]
avp_inverter_interface.h [code]Base class for AVP's DWF solver interface
avp_ssed_solver.cc [code]
avp_ssed_solver.h [code]DWF/SSE double-prec solver
avp_ssef_solver.cc [code]
avp_ssef_solver.h [code]Base class for AVP's SSEF-DWF solver interface
axgauge.cc [code]Axial gauge fixing
axgauge.h [code]Axial gauge fixing
barcomp_diquark_w.cc [code]Construct all components of a baryon propagator using a diquark
barcomp_diquark_w.h [code]Construct all components of a baryon propagator using a diquark
barcomp_w.cc [code]Construct all components of a baryon propagator
barcomp_w.h [code]Construct all components of a baryon propagator
barhqlq_w.cc [code]Heavy-light baryon 2-pt functions
barhqlq_w.h [code]Heavy-light baryon 2-pt functions
barQll_w.cc [code]Heavy Baryon (Qll) 2-pt function : Orginos and Savage
barQll_w.h [code]Heavy Baryon (Qll) 2-pt function : Orginos and Savage
barspinmat_w.cc [code]Baryon spin and projector matrices
barspinmat_w.h [code]Baryon spin and projector matrices
baryon_2pt_w.cc [code]Construct baryon 2pt correlators
baryon_2pt_w.h [code]Construct baryon 2pt correlators
baryon_operator.cc [code]Construct baryon operators
baryon_operator.h [code]Construct baryon operator
baryon_operator_aggregate_w.cc [code]All baryon operators
baryon_operator_aggregate_w.h [code]All baryon operators
baryon_operator_factory_w.h [code]Factory for producing baryon operators
baryon_s.cc [code]
baryon_s.h [code]
baryon_seqsrc_w.cc [code]Construct baryon sequential sources
baryon_seqsrc_w.h [code]Construct baryon sequential sources
baryon_spinmat_funcmap_w.cc [code]All baryon spin matrix contraction objects
baryon_spinmat_funcmap_w.h [code]Factory for producing baryon spin matrix contraction objects
baryon_w.cc [code]Baryon 2-pt functions
baryon_w.h [code]Baryon 2-pt functions
bigfloat.h [code]Remez algorithm for finding nth roots
block.cc [code]Construct "block" links
block.h [code]Construct "block" links
boson.h [code]Boson action support
boundcond.h [code]Base class for all boundary conditions
BuildingBlocks_w.cc [code]
BuildingBlocks_w.h [code]
central_tprec_fermact_qprop_w.cc [code]Propagator solver for a generic even-odd preconditioned fermion operator
central_tprec_fermact_w.h [code]
central_tprec_linop.h [code]Time-preconditioned Linear Operators
central_tprec_logdet_tt_monomial_w.cc [code]Even-odd preconditioned log(det(T^ T ))
central_tprec_logdet_tt_monomial_w.h [code]Even-odd preconditioned log(det(A_ee))
central_tprec_nospin_utils.h [code]Support for time preconditioning
cfgtransf.cc [code]Many-to-many gauge transformation routine
cfgtype_io.cc [code]Configuration structure IO
cfgtype_io.h [code]Configuration structure IO
chroma.cc [code]Main program to run all measurement codes
chroma.h [code]Primary include file for CHROMA in application codes
chroma_config.h [code]
chroma_init.cc [code]Initialization of Chroma
chroma_init.h [code]Initialization of Chroma
chromabase.h [code]Primary include file for CHROMA library code
chromainc.h [code]
chrono_predictor.h [code]Chronological predictor for HMC
chrono_predictor_factory.h [code]Monomial factories
circular_buffer.h [code]Circular buffers
clover_apply_ssed.cc [code]
clover_fermact_params_w.cc [code]Clover fermion action parameters
clover_fermact_params_w.h [code]Parameters for Clover fermion action
clover_term_bagel_clover.cc [code]Clover term linear operator
clover_term_bagel_clover.h [code]Clover term linear operator
clover_term_base_w.cc [code]Clover term
clover_term_base_w.h [code]Clover term linear operator
clover_term_qdp_w.cc [code]Clover term linear operator
clover_term_qdp_w.h [code]Clover term linear operator
clover_term_ssed.cc [code]Clover term linear operator
clover_term_ssed.h [code]Clover term linear operator
clover_term_w.h [code]Include possibly optimized Clover terms
collect_multi_propcomp.cc [code]Main code for propagator generation
collect_propcomp.cc [code]Main code for propagator generation
common_declarations.h [code]
comp_approx.cc [code]Components of rational approximation
comp_approx.h [code]Components of rational approximation
conjgauge.cc [code]Take the complex conjugate of a gauge field
conjgauge.h [code]Take the complex conjugate of a gauge field
constgauge.cc [code]Constant diagonal gauge field
constgauge.h [code]Take the complex conjugate of a gauge field
containers.h [code]
cool.cc [code]
coulgauge.cc [code]Coulomb (and Landau) gauge fixing
coulgauge.h [code]Coulomb (and Landau) gauge fixing
cppacs_gauge_init.cc [code]Read a CPPACS config
cppacs_gauge_init.h [code]Read a CPPACS config
cppacs_io.cc [code]CPPACS gauge format routines
cppacs_io.h [code]CPPACS gauge format routines
create_state.h [code]Create a connection state
curcor2_w.cc [code]Mesonic current correlators
curcor2_w.h [code]
curcor3_w.cc [code]Mesonic current correlators
curcor3_w.h [code]
default_gauge_field.cc [code]Functions to set and get default gauge field
default_gauge_field.h [code]Functions to set and get default gauge field
delta_2pt_w.cc [code]Construct meson 2pt correlators
delta_2pt_w.h [code]Construct delta 2pt correlators
deriv_meson_seqsrc_w.cc [code]Construct meson sequential sources
deriv_meson_seqsrc_w.h [code]Construct derivative meson sequential sources
deriv_quark_displacement_s.cc [code]Derivative displacements
deriv_quark_displacement_s.h [code]Staggered Derivative displacements
deriv_quark_displacement_w.cc [code]Derivative displacements
deriv_quark_displacement_w.h [code]Derivative displacements
dilute_gauss_src_s.cc [code]Variety of Z2 noise sources
dilute_gauss_src_s.h [code]Dilute Gaussian sources
dilutezN_source_const.cc [code]Random ZN wall source construction
dilutezN_source_const.h [code]Random Z(N) source construction using dilution
dilution_quark_source_const_w.cc [code]Dilution scheme specified by MAKE_SOURCE and PROPAGATOR calls
dilution_quark_source_const_w.h [code]Dilution scheme inferred from pre-generated solutions
dilution_scheme.h [code]Dilution Schemes
dilution_scheme_aggregate.cc [code]All dilution scheme factories
dilution_scheme_aggregate.h [code]All dilution scheme factories
dilution_scheme_factory.h [code]Factory for dilution schemes
diquark_w.cc [code]Construct a diquark object
diquark_w.h [code]Construct a diquark object
diractodr.cc [code]Basis rotation matrix from Dirac to Degrand-Rossi (and reverse)
diractodr.h [code]Basis rotation matrix from Dirac to Degrand-Rossi (and reverse)
disordered_gauge_init.cc [code]Create a disordered config
disordered_gauge_init.h [code]Create a disordered config
disp_colvec_map.cc [code]Holds displaced color vectors
disp_colvec_map.h [code]Holds displaced color vectors
displace.cc [code]Parallel transport a lattice field
displace.h [code]Parallel transport a lattice field
displacement.cc [code]Parallel transport a lattice field
displacement.h [code]Parallel transport a lattice field
dslash_array_w.h [code]Include possibly optimized Wilson dslash
dslash_w.h [code]Include possibly optimized Wilson dslash
dwf_fermact_qprop_array_w.cc [code]Base class for unprec and even-odd preconditioned DWF qprop
dwf_qpropt_w.h [code]Pick up possibly optimized DWF inverters
dwf_quarkprop4_w.cc [code]Full quark propagator solver for domain wall fermions
dwf_quarkprop4_w.h [code]Full quark propagator solver for domain wall fermions
dwffld_w.cc [code]DWF parity/rotation operator
dwffld_w.h [code]DWF parity/rotation operator
eesu2.cc [code]Exactly exponentiate a SU(2) lie algebra element
eesu2.h [code]Exactly exponentiate a SU(2) lie algebra element
eesu3.cc [code]Exactly exponentiate a SU(3) lie algebra element
eesu3.h [code]Exactly exponentiate a SU(3) lie algebra element
eeu1.cc [code]Exactly exponentiate a U(1) lie algebra element
eeu1.h [code]Exactly exponentiate a U(1) lie algebra element
eig/eig.h [code]Eigenvalue measurements
inline/eig/eig.h [code]Inline measurements for eigenvalues
eig_s.h [code]Eigenvalue measurements
eig_spec.cc [code]Compute low lying eigenvalues of the hermitian H
eig_spec.h [code]
eig_spec_array.cc [code]Compute low lying eigenvalues of the hermitian H
eig_spec_array.h [code]
eig_w.h [code]Eigenvalue measurements
eigen_io.cc [code]
eigen_io.h [code]Eigenvalue IO
eigen_state.h [code]Eigenstate reader
eigeninfo.h [code]Hold eigenvalues and eigenvectors
enum_cfgtype_io.cc [code]CfgType enum
enum_cfgtype_io.h [code]CfgType enum
enum_coeffs_io.cc [code]Coeffs enum
enum_coeffs_io.h [code]Coeffs enum
enum_eigenvectype_io.cc [code]Eigenvector type enum
enum_eigenvectype_io.h [code]Eigenvector type enum
enum_fermtype_io.cc [code]FermType enum
enum_fermtype_io.h [code]FermType enum
enum_gaugeacttype_io.cc [code]Gauge action enum
enum_gaugeacttype_io.h [code]Gauge action enum
enum_heatbathtype_io.cc [code]Heatbath enum
enum_heatbathtype_io.h [code]Heatbath enum
enum_inner_solver_type_io.cc [code]Inner solver enum
enum_inner_solver_type_io.h [code]Inner solver enum
enum_io.h [code]Enums
enum_loops_s.h [code]Enums for the different types of stochastic source
enum_md_integrator_type_io.cc [code]MD integrator enum
enum_md_integrator_type_io.h [code]MD integrator enum
enum_mesonop_io.cc [code]Type of contractions for stochastic meson operators
enum_mesonop_io.h [code]Type of contractions for stochastic meson operators
enum_plusminus_io.cc [code]Inverter type enum
enum_plusminus_io.h [code]Plus/Minus type enum from Chroma
enum_proptype_io.cc [code]PropType enum
enum_proptype_io.h [code]PropType enum
enum_qdpvolfmt_io.cc [code]QDP volfmt enum
enum_qdpvolfmt_io.h [code]QDP volfmt enum
enum_quarkspintype_io.cc [code]Enum for what spin components of a quark prop to compute
enum_quarkspintype_io.h [code]Enum for what spin components of a quark prop to compute
enum_simplebctype_io.cc [code]Simple BC type enum
enum_simplebctype_io.h [code]Simple BC type enum
enum_stochsrc_io.cc [code]Stochastic source enum
enum_stochsrc_io.h [code]Stochastic source enum
enum_type_map.h [code]Enum map
enum_wavetype_io.cc [code]Wavetype enum
enum_wavetype_io.h [code]Wavetype enum
eo3dprec_s_cprec_t_clover_fermact_w.cc [code]EO3DPreconditioned Wilson fermion action
eo3dprec_s_cprec_t_clover_fermact_w.h [code]
eo3dprec_s_cprec_t_clover_linop_w.cc [code]Unpreconditioned Clover linear operator
eo3dprec_s_cprec_t_clover_linop_w.h [code]
eo3dprec_s_cprec_t_wilson_fermact_w.cc [code]EO3DPreconditioned Wilson fermion action
eo3dprec_s_cprec_t_wilson_fermact_w.h [code]
eo3dprec_s_cprec_t_wilson_linop_w.cc [code]Unpreconditioned Wilson linear operator
eo3dprec_s_cprec_t_wilson_linop_w.h [code]
eo3dprec_s_cprec_t_wilstype_fermact_w.h [code]ILUPreconditioned spatial Preconditioned Temporal Wilson like fermion action
eo_linop.h [code]Linear Operators
eoprec_clover_extfield_fermact_w.cc [code]Even-odd preconditioned Clover fermion action with an external field
eoprec_clover_extfield_fermact_w.h [code]Even-odd preconditioned Clover fermion action with an external field
eoprec_clover_extfield_linop_w.cc [code]Even-odd preconditioned Clover fermion linear operator in an external field
eoprec_clover_extfield_linop_w.h [code]Even-odd preconditioned Clover fermion linear operator in an external field
eoprec_clover_fermact_w.cc [code]Even-odd preconditioned Clover fermion action
eoprec_clover_fermact_w.h [code]Even-odd preconditioned Clover fermion action
eoprec_clover_linop_ssecombined_w.cc [code]Even-odd preconditioned clover linear operator
eoprec_clover_linop_w.cc [code]Even-odd preconditioned clover linear operator
eoprec_clover_linop_w.h [code]Even-odd preconditioned Clover fermion linear operator
eoprec_constdet_linop.h [code]Preconditioned 4D Linop with Gauge Independent Even-Even part
eoprec_constdet_one_flavor_rat_monomial5d_w.cc [code]One-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_one_flavor_rat_monomial5d_w.h [code]One-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_one_flavor_rat_monomial_w.cc [code]One-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_one_flavor_rat_monomial_w.h [code]One-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_conv_monomial5d_w.cc [code]One-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_conv_monomial5d_w.h [code]One-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_conv_monomial_w.cc [code]One-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_conv_monomial_w.h [code]One-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_rat_monomial5d_w.cc [code]One-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_rat_monomial5d_w.h [code]One-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_rat_monomial_w.cc [code]One-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_one_flavor_ratio_rat_rat_monomial_w.h [code]One-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_monomial5d_w.cc [code]Two-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_two_flavor_monomial5d_w.h [code]Two-flavor collection of even-odd preconditioned 5D ferm monomials
eoprec_constdet_two_flavor_monomial_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_monomial_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_polynomial_monomial_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_polynomial_monomial_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_polyprec_monomial_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_polyprec_monomial_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_conv_monomial5d_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_conv_monomial5d_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_conv_monomial_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_conv_monomial_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_rat_monomial5d_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_rat_monomial5d_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_rat_monomial_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_two_flavor_ratio_conv_rat_monomial_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_constdet_wilstype_fermact_w.h [code]Even-odd const determinant Wilson-like fermact
eoprec_dwf_fermact_array_w.cc [code]4D style even-odd preconditioned domain-wall fermion action
eoprec_dwf_fermact_array_w.h [code]4D style even-odd preconditioned domain-wall fermion action
eoprec_dwf_fermact_base_array_w.h [code]Base class for even-odd preconditioned domain-wall-like fermion actions
eoprec_dwf_linop_array_w.cc [code]4D-style even-odd preconditioned domain-wall linear operator
eoprec_dwf_linop_array_w.h [code]4D Even Odd preconditioned domain-wall fermion linear operator
eoprec_dwf_qprop_array_cg_dwf_lowmem_w.h [code]4D style even-odd preconditioned domain-wall fermion action
eoprec_dwf_qprop_array_cg_dwf_w.h [code]4D style even-odd preconditioned domain-wall fermion action
eoprec_dwflike_linop_base_array_w.h [code]Base class for even-odd preconditioned domain-wall-like linops
eoprec_fermact_qprop.cc [code]Propagator solver for a generic even-odd preconditioned fermion operator
eoprec_fermact_qprop_array.cc [code]Propagator solver for a generic even-odd preconditioned fermion operator
eoprec_fermact_qprop_array.h [code]Propagator solver for a generic even-odd preconditioned fermion operator
eoprec_ht_contfrac5d_fermact_array_w.cc [code]Unpreconditioned extended-Overlap (5D) (Naryanan&Neuberger) action
eoprec_ht_contfrac5d_fermact_array_w.h [code]Even-odd preconditioned Continued Fraction 5D
eoprec_ht_contfrac5d_linop_array_w.cc [code]4D-style even-odd preconditioned domain-wall linear operator
eoprec_ht_contfrac5d_linop_array_w.h [code]Unpreconditioned extended-Overlap (5D) (Naryanan&Neuberger) linear operator
eoprec_kno_fermact_array_w.cc [code]Preconditioned KNO fermion action
eoprec_kno_fermact_array_w.h [code]Preconditioned KNO domain-wall fermion action
eoprec_linop.h [code]Base class for even-odd preconditioned 4D and 5D Linop
eoprec_logdet_ee_monomial_w.cc [code]Even-odd preconditioned log(det(A_ee))
eoprec_logdet_ee_monomial_w.h [code]Even-odd preconditioned log(det(A_ee))
eoprec_logdet_linop.h [code]Preconditioned Linear Operators where the Even Even part depends on the gauge field
eoprec_logdet_two_flavor_monomial_w.cc [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_logdet_two_flavor_monomial_w.h [code]Two-flavor collection of even-odd preconditioned 4D ferm monomials
eoprec_logdet_wilstype_fermact_w.h [code]Even-odd const determinant Wilson-like fermact
eoprec_nef_fermact_array_w.cc [code]4D style even-odd preconditioned NEF fermion action
eoprec_nef_fermact_array_w.h [code]4D style even-odd preconditioned NEF fermion action
eoprec_nef_general_linop_array_w.cc [code]4D-style even-odd preconditioned NEF domain-wall linear operator
eoprec_nef_general_linop_array_w.h [code]4D Even Odd preconditioned NEF domain-wall fermion linear operator generalised to take array of b_5 and c_5
eoprec_nef_linop_array_w.cc [code]4D-style even-odd preconditioned NEF domain-wall linear operator
eoprec_nef_linop_array_w.h [code]4D Even Odd preconditioned NEF domain-wall fermion linear operator
eoprec_ovdwf_fermact_array_w.cc [code]4D style even-odd preconditioned Overlap-DWF (Borici) action
eoprec_ovdwf_fermact_array_w.h [code]4D style even-odd preconditioned Overlap-DWF (Borici) action
eoprec_ovdwf_linop_array_w.cc [code]4D Even Odd preconditioned Overlap-DWF (Borici) linear operator
eoprec_ovdwf_linop_array_w.h [code]4D Even Odd preconditioned Overlap-DWF (Borici) linear operator
eoprec_ovext_fermact_array_w.cc [code]Unpreconditioned extended-Overlap (5D) (Naryanan&Neuberger) action
eoprec_ovext_fermact_array_w.h [code]Unpreconditioned extended-Overlap (5D) (Naryanan&Neuberger) action
eoprec_ovext_linop_array_w.cc [code]
eoprec_ovext_linop_array_w.h [code]Unpreconditioned extended-Overlap (5D) (Naryanan&Neuberger) linear operator
eoprec_ovlap_contfrac5d_fermact_array_w.cc [code]Unpreconditioned extended-Overlap (5D) (Naryanan&Neuberger) action
eoprec_ovlap_contfrac5d_fermact_array_w.h [code]Even-odd preconditioned Continued Fraction 5D
eoprec_ovlap_contfrac5d_linop_array_opt_w.cc [code]Optimized version of 5D continued frac. linop
eoprec_ovlap_contfrac5d_linop_array_opt_w.h [code]Optimized Even-odd prec. 5D continued fraction linop
eoprec_ovlap_contfrac5d_linop_array_w.cc [code]Even-odd prec. 5D continued fraction linop
eoprec_ovlap_contfrac5d_linop_array_w.h [code]Even-odd prec. 5D continued fraction linop
eoprec_ovlap_contfrac5d_linop_base_array_w.cc [code]Base class for even-odd prec. 5D continued fraction linop
eoprec_ovlap_contfrac5d_linop_base_array_w.h [code]Base class for Even-odd prec. 5D continued fraction linop
eoprec_ovlap_contfrac5d_pv_linop_array_w.cc [code]Even-odd preconditioned Pauli-Villars Continued Fraction 5D
eoprec_ovlap_contfrac5d_pv_linop_array_w.h [code]Even-odd preconditioned Pauli-Villars Continued Fraction 5D
eoprec_parwilson_fermact_w.cc [code]Even-odd preconditioned Wilson fermion action with parity breaking term
eoprec_parwilson_fermact_w.h [code]Even-odd preconditioned Wilson fermion action with parity breaking term
eoprec_parwilson_linop_w.cc [code]Even-odd preconditioned Wilson fermion linear operator with parity breaking term
eoprec_parwilson_linop_w.h [code]Even-odd preconditioned Wilson fermion linear operator with parity breaking term
eoprec_slic_fermact_w.cc [code]Even-odd preconditioned Clover fermion action
eoprec_slic_fermact_w.h [code]Even-odd preconditioned Clover fermion action
eoprec_slic_linop_w.cc [code]Even-odd preconditioned clover linear operator
eoprec_slic_linop_w.h [code]Even-odd preconditioned Clover fermion linear operator
eoprec_slrc_fermact_w.cc [code]Even-odd preconditioned Clover fermion action (fat-relevant, thin-irrelevant terms)
eoprec_slrc_fermact_w.h [code]Even-odd preconditioned Clover fermion action (fat-relevant, thin-irrelevant terms)
eoprec_slrc_linop_w.cc [code]Even-odd preconditioned Clover linear operator (fat-relevant, thin-irrelevant terms)
eoprec_slrc_linop_w.h [code]Even-odd preconditioned Clover linear operator (fat-relevant, thin-irrelevant terms)
eoprec_staggered_qprop.h [code]Propagator solver for an even-odd non-preconditioned fermion operator
eoprec_twm_fermact_array_w.cc [code]Even-odd preconditioned Twisted-mass where each flavor is one of two array elements
eoprec_twm_fermact_array_w.h [code]Even-odd preconditioned Twisted-mass where each flavor is one of two array elements
eoprec_twm_linop_array_w.cc [code]Even-odd preconditioned Twisted-mass linop where each flavor is one of two array elements
eoprec_twm_linop_array_w.h [code]Even-odd preconditioned Twisted-mass linop where each flavor is one of two array elements
eoprec_wilson_coarse_fine_fermact_w.cc [code]Even-odd preconditioned Wilson fermion action supporting 2+2 anisotropy
eoprec_wilson_coarse_fine_fermact_w.h [code]Even-odd preconditioned Wilson fermion action supporting 2+2 anisotropy
eoprec_wilson_fermact_w.cc [code]Even-odd preconditioned Wilson fermion action
eoprec_wilson_fermact_w.h [code]Even-odd preconditioned Wilson fermion action
eoprec_wilson_linop_w.cc [code]Even-odd preconditioned Wilson linear operator
eoprec_wilson_linop_w.h [code]Even-odd preconditioned Wilson fermion linear operator
eoprec_wilstype_fermact_w.h [code]Even-odd preconditioned Wilson-like fermion actions
eoprec_zolo_nef_fermact_array_w.cc [code]Unpreconditioned NEF fermion action
eoprec_zolo_nef_fermact_array_w.h [code]Unpreconditioned NEF domain-wall fermion action
etensor.cc [code]Tensor used for E representations
etensor.h [code]Tensor used for E representations
exact_hamiltonian.cc [code]
exact_hamiltonian.h [code]Exact Hamiltonians
ExampleBuildingBlocks.cc [code]Main code for generating building blocks
expm12.cc [code]12-th order exponentiation of a lattice color matrix
expm12.h [code]12-th order exponentiation of a lattice color matrix
expmat.cc [code]Exponentiate a SU(n) lie algebra element by some method,
expmat.h [code]Exponentiate a SU(n) lie algebra element by some method,
expsu3.cc [code]
expsu3.h [code]
extfield.h [code]External field
extfield_aggregate_w.cc [code]External field aggregate
extfield_aggregate_w.h [code]External field functions
extfield_factory_w.h [code]External field factory
extfield_fermstate_w.cc [code]External field ferm state and a creator
extfield_fermstate_w.h [code]Fermion external field state and a creator
fat7_links_s.cc [code]Support for Asqtad
actions/ferm/ferm.h [code]Fermion action support
util/ferm/ferm.h [code]Utilities for manipulating fermion fields
ferm_createstate_aggregate_s.cc [code]All ferm create-state method
ferm_createstate_aggregate_s.h [code]All ferm create-state method
ferm_createstate_aggregate_w.cc [code]All ferm create-state method
ferm_createstate_aggregate_w.h [code]All ferm create-state method
ferm_createstate_factory_s.h [code]Fermion create state factory
ferm_createstate_factory_w.h [code]Fermion create state factory
ferm_createstate_reader_s.cc [code]All ferm create-state method
ferm_createstate_reader_s.h [code]All ferm create-state method
ferm_createstate_reader_w.cc [code]All ferm create-state method
ferm_createstate_reader_w.h [code]All ferm create-state method
ferm_s.h [code]
ferm_w.h [code]
fermact.h [code]Class structure for fermion actions
fermact.orig.h [code]Class structure for fermion actions
fermact_factory_s.h [code]Fermion action factories
fermact_factory_w.h [code]Fermion action factories
fermact_qprop.cc [code]Propagator solver for a generic non-preconditioned fermion operator
fermact_qprop_array.cc [code]Propagator solver for a generic non-preconditioned fermion operator
fermacts.h [code]Fermion actions
fermacts_aggregate_s.cc [code]All Staggered-type fermion actions
fermacts_aggregate_s.h [code]All Staggered-type fermion actions
fermacts_aggregate_w.cc [code]All Wilson-type fermion actions
fermacts_aggregate_w.h [code]All Wilson-type fermion actions
fermacts_s.h [code]Fermion actions
fermacts_w.h [code]Fermion actions
fermbc.h [code]Fermion action boundary conditions
fermbc_factory_s.h [code]Fermion Boundary Condition factories
fermbc_factory_w.h [code]Fermion Boundary Condition factories
fermbcs.h [code]Fermion boundary conditions
fermbcs_aggregate_s.cc [code]All Wilson-type fermion boundary conditions
fermbcs_aggregate_s.h [code]All Staggered-type fermion boundary conditions
fermbcs_aggregate_w.cc [code]All Wilson-type fermion boundary conditions
fermbcs_aggregate_w.h [code]All Wilson-type fermion boundary conditions
fermbcs_reader_s.cc [code]Fermionic BC reader
fermbcs_reader_s.h [code]Fermionic boundary condition reader
fermbcs_reader_w.cc [code]Fermionic BC reader
fermbcs_reader_w.h [code]Fermionic boundary condition reader
fermstates.h [code]Fermion states
field_state.h [code]Field state
fixed_random_ferm_monomial.cc [code]Fixed random monomial
fixed_random_ferm_monomial.h [code]Fixed random monomial
follana_io_s.cc [code]
follana_io_s.h [code]
force_monitors.cc [code]Helper function for calculating forces
force_monitors.h [code]Helper function for calculating forces
formfac_w.cc [code]Form-factors
formfac_w.h [code]Form-factors
ft.h [code]Fourier transform support
funcmap.h [code]Map of function calls
fuzglue.cc [code]Compute 'fuzzy' (blocked) glueball correlation functions
fuzglue.h [code]Compute 'fuzzy' (blocked) glueball correlation functions
fuzwilp.cc [code]Calculate ape-fuzzed Wilson loops
fuzwilp.h [code]Calculate ape-fuzzed Wilson loops
fuzz_smear.cc [code]Fuzzed sources
fuzz_smear.h [code]Fuzzed sources
g4g5_x_g4g5_local.cc [code]
g4g5_x_g4g5_local.h [code]
gamma5_herm_w.cc [code]Gamma5 hermiticity
gamma5_herm_w.h [code]Gamma5 hermiticity
gamma_displacement_w.cc [code]Gamma insertion/displacement
gamma_displacement_w.h [code]Gamma insertions
gammasgn_w.cc [code]Compute gamma matrix multiplication table factors
gammasgn_w.h [code]Compute gamma matrix multiplication table factors
actions/gauge/gauge.h [code]Gauge action support
util/gauge/gauge.h [code]Include all gauge utility routines
gauge_createstate_aggregate.cc [code]All gauge create-state method
gauge_createstate_aggregate.h [code]All gauge create-state method
gauge_createstate_factory.h [code]Gauge create state factory
gauge_init.h [code]Gauge initialization
gauge_init_aggregate.cc [code]Gauge initialization
gauge_init_aggregate.h [code]All gauge field initializers
gauge_init_factory.h [code]Factory for producing gauge initializer objects
gauge_io.cc [code]Routines associated with Chroma propagator gauge IO
gauge_io.h [code]Gauge reader/writers in QIO format
gauge_monomial.cc [code]Generic gauge action monomial wrapper
gauge_monomial.h [code]Generic gauge action monomial wrapper
gauge_s.h [code]Include all gauge utility routines
gauge_startup.cc [code]Initialize the gauge fields
gauge_startup.h [code]Initialize the gauge fields
gaugeact.h [code]Class structure for gauge actions
gaugeact_factory.h [code]Fermion action factories
gaugeacts.h [code]Gauge actions
gaugeacts_aggregate.cc [code]Generic gauge action wrapper
gaugeacts_aggregate.h [code]All gauge actions
gaugebc.h [code]Gauge boundary conditions
gaugebc_aggregate.cc [code]Gauge boundary condition aggregator
gaugebc_aggregate.h [code]Gauge boundary condition aggregator
gaugebc_factory.h [code]Gauge boundary condition factories
gaugebcs.h [code]Gauge boundary conditions
gaugestates.h [code]Gauge states
gaus_quark_smearing.cc [code]Gaussian smearing of color vector
gaus_quark_smearing.h [code]Gaussian smearing of color vector and propagator
gaus_smear.cc [code]Gaussian smearing of color vector
gaus_smear.h [code]Gaussian smearing of color vector
gbaryonall2all.cc [code]
gfix/gfix.h [code]Gauge fixing routines
inline/gfix/gfix.h [code]Inline gauge fixing measurements
global_metropolis_accrej.cc [code]Simple metropolis accept/reject
global_metropolis_accrej.h [code]Global metropolis
glue/glue.h [code]Gluonic observables
inline/glue/glue.h [code]Inline glue measurements
gluecor.cc [code]Construct 0++, 2++ and 1+- glueball correlation functions from fuzzy links
gluecor.h [code]Construct 0++, 2++ and 1+- glueball correlation functions from fuzzy links
gramschm.cc [code]Gramm-Schmidt orthogonolization
gramschm.h [code]Gramm-Schmidt orthogonolization
gramschm_array.cc [code]Gramm-Schmidt orthogonolization
gramschm_array.h [code]Gramm-Schmidt orthogonolization
grelax.cc [code]Perform a single gauge fixing iteration
grelax.h [code]Perform a single gauge fixing iteration
group_baryon_operator_w.cc [code]Construct group baryon operators
group_baryon_operator_w.h [code]Construct group baryon operators
group_baryon_run.cc [code]
hadron/hadron.h [code]Hadronic observables
inline/hadron/hadron.h [code]Inline measurements for hadron observables
hadron_2pt.cc [code]Construct hadron 2pt correlators
hadron_2pt.h [code]Construct hadron 2pt correlators
hadron_contract.cc [code]Construct hadron contractions
hadron_contract.h [code]Construct hadron correlators
hadron_contract_aggregate.cc [code]All hadron contraction constructors
hadron_contract_aggregate.h [code]All hadron contraction constructors
hadron_contract_factory.h [code]Factory for producing hadron correlator objects
hadron_corr_s.h [code]
hadron/hadron_s.h [code]Hadronic observables
inline/hadron_s/hadron_s.h [code]Inline measurements for hadron observables
hadron_seqsource.cc [code]Construct hadron sequential sources
hadron_seqsource.h [code]Construct hadron sequential sources
hadron_w.h [code]Hadronic observables
hamiltonian.h [code]Hamiltonian systems
hamiltonian_io.cc [code]
hamiltonian_io.h [code]Hamiltonion IO
handle.h [code]Class for counted reference semantics
hb_params.h [code]Parameters for heat-bath
heatbath.h [code]Heatbath
heavy_hadron_potentials_w.cc [code]Potential between 2 heavy hadrons : Detmold Correlators checked independentely by Savage
heavy_hadron_potentials_w.h [code]Potential between 2 heavy hadrons : Detmold
heavy_hadrons_su3_w.cc [code]Heavy hadrons in su3 : Detmold
heavy_hadrons_su3_w.h [code]Potential between 2 heavy hadrons : Detmold Correlators checked independentely by Savage
hisq_fermact_params_s.cc [code]Hisq fermion action parameters
hisq_fermact_params_s.h [code]Hisq fermion action parameters
hisq_fermact_s.cc [code]Hisq staggered fermion action
hisq_fermact_s.h [code]Hisq staggered fermion action
hisq_qprop.cc [code]Propagator solver for an even-odd non-preconditioned fermion operator
hisq_qprop.h [code]Hisq propagator wrapper
hmc.cc [code]Main code for HMC with dynamical fermion generation
hmc.h [code]HMC trajectories
hotst.cc [code]Set a gauge field from a sample of (almost) Haar measure
hotst.h [code]Set a gauge field from a sample of (almost) Haar measure
hybmeson_w.cc [code]Hybrid meson 2-pt functions
hybmeson_w.h [code]Hybrid meson 2-pt functions
hyp_link_smearing.cc [code]Hyp link smearing
hyp_link_smearing.h [code]HYP link smearing
hyp_smear.cc [code]Hyp-smearing of the gauge configuration
hyp_smear.h [code]Hyp smear a gauge field
hyp_smear3d.cc [code]Hyp-smearing of the gauge configuration
hyp_smear3d.h [code]Hyp smear a gauge field
ilu2prec_s_cprec_t_clover_fermact_w.cc [code]ILU2Preconditioned Clover fermion action
ilu2prec_s_cprec_t_clover_fermact_w.h [code]
ilu2prec_s_cprec_t_clover_linop_w.cc [code]Unpreconditioned Clover linear operator
ilu2prec_s_cprec_t_clover_linop_w.h [code]
ilu2prec_s_cprec_t_wilson_fermact_w.cc [code]ILU2Preconditioned Wilson fermion action
ilu2prec_s_cprec_t_wilson_fermact_w.h [code]
ilu2prec_s_cprec_t_wilson_linop_w.cc [code]Unpreconditioned Wilson linear operator
ilu2prec_s_cprec_t_wilson_linop_w.h [code]
ilu2prec_s_cprec_t_wilsonlike_linop_w.h