- _ -

• _reduction_space : bicgstab_kernels_scalarsite.cc
• _reduction_space_un : bicgstab_kernels_scalarsite.cc

- a -

• a5 : eoprec_dwf_fermact_array_w.cc
• ActAccu : topol.cc
• AlgETrj : common_declarations.h
• AlgLPStp : common_declarations.h
• Algorithm : common_declarations.h
• AlpExp : common_declarations.h
• AlpLog : common_declarations.h
• alternate_name : szinqio_gauge_init.cc
• antisym_tensor3d : antisymtensor.cc

- b -

• bc : inline_static_light_spec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• BetaMC : common_declarations.h
• BetaMD : common_declarations.h

- c -

• chi : pade_trln_w.cc, invbicg.cc, pade_trln_w.cc
• chi_norm : invbicg.cc
• chix : ldumul_w.cc
• ClovCoeff : common_declarations.h
• ClovCoeffR : common_declarations.h
• ClovCoeffT : common_declarations.h
• count : octave.h
• cuda_device : chroma_init.cc
• CVSBuildingBlocks_cc : BuildingBlocks_w.cc
• CVSBuildingBlocks_hh : BuildingBlocks_w.h
• cwd : chroma_init.cc

- d -

• DenPolyRoots : common_declarations.h
• dir_decay : sftmom.cc, scalar_loops_s.cc
• dt : common_declarations.h

- e -

• E_tensor3d : etensor.cc
• elements : singleton.h
• eps : staggered_operators_s.cc

- f -

• F : zolotarev_coeffs.cc
• FermAct : common_declarations.h
• FermiP : common_declarations.h
• FermTypeP : common_declarations.h
• fla : asqtad_cps_wrapper_qprop.cc
• foo_xml : t_io.cc
• force_secs : stout_utils.cc
• functions_secs : stout_utils.cc

- g -

• GaugeAct : common_declarations.h
• GlueCoeffPG : common_declarations.h
• GlueCoeffRT : common_declarations.h
• GlueImp : common_declarations.h

- h -

• H_parity : common_declarations.h
• heavy_prop_1 : inline_heavy_light_cont_w.cc
• heavy_prop_2 : inline_heavy_light_cont_w.cc

- i -

• i_cool : meslate.cc
• ichiral : mespbp_s.cc
• in : asqtad_cps_wrapper_qprop.cc
• info : asqtad_cps_wrapper_qprop.cc
• initedP : lwldslash_w_sse.cc
• Initialized : staggered_operators_s.cc
• initP : symtensor.cc, gammasgn_w.cc, etensor.cc, antisymtensor.cc, default_gauge_field.cc
• input_filename : chroma_init.cc
• IntrplOrd : common_declarations.h

- j -

• j_decay : meslate.cc

- k -

• K : zolotarev_coeffs.cc
• KappaMC : common_declarations.h
• KappaMD : common_declarations.h
• Kappas : pade_trln_w.cc

- l -

• l : make_seeds.cc
• LamMi : common_declarations.h
• LamPl : common_declarations.h
• LinOp : syssolver_linop_OPTeigbicg.cc
• log_filename : chroma_init.cc

- m -

• m : make_seeds.cc
• Mass : pbg5p_w.cc, inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• MassMC : common_declarations.h
• MassMD : common_declarations.h
• MaxCG : pbg5p_w.cc, common_declarations.h
• MdagM : syssolver_mdagm_OPTeigcg.cc
• meson_eta2 : gammasgn_w.cc
• MonitordH : common_declarations.h
• monitorForcesP : force_monitors.cc
• MRover : common_declarations.h

- n -

• N5 : eoprec_dwf_fermact_array_w.cc
• n_congrd : mespbp_s.cc, mespbg5p_w.cc
• n_count : pade_trln_w.cc, invbicg.cc
• N_quarks : inline_stoch_group_meson_w.cc, inline_stoch_group_baryon_w.cc
• name : unprec_two_flavor_ratio_conv_rat_monomial_w.cc, unprec_two_flavor_ratio_conv_rat_monomial5d_w.cc, unprec_two_flavor_ratio_conv_conv_monomial_w.cc, unprec_two_flavor_ratio_conv_conv_monomial5d_w.cc, unprec_two_flavor_monomial_w.cc, unprec_two_flavor_monomial5d_w.cc, unprec_one_flavor_ratio_rat_rat_monomial_w.cc, unprec_one_flavor_ratio_rat_rat_monomial5d_w.cc, unprec_one_flavor_ratio_rat_conv_monomial_w.cc, unprec_one_flavor_ratio_rat_conv_monomial5d_w.cc, unprec_one_flavor_rat_monomial_w.cc, unprec_one_flavor_rat_monomial5d_w.cc, gauge_monomial.cc, fixed_random_ferm_monomial.cc, eoprec_logdet_two_flavor_monomial_w.cc, eoprec_constdet_two_flavor_ratio_conv_rat_monomial_w.cc, eoprec_constdet_two_flavor_ratio_conv_rat_monomial5d_w.cc, eoprec_constdet_two_flavor_ratio_conv_conv_monomial_w.cc, eoprec_constdet_two_flavor_ratio_conv_conv_monomial5d_w.cc, eoprec_constdet_two_flavor_monomial_w.cc, eoprec_constdet_two_flavor_monomial5d_w.cc, eoprec_constdet_one_flavor_ratio_rat_rat_monomial_w.cc, eoprec_constdet_one_flavor_ratio_rat_rat_monomial5d_w.cc, eoprec_constdet_one_flavor_ratio_rat_conv_monomial_w.cc, eoprec_constdet_one_flavor_ratio_rat_conv_monomial5d_w.cc, eoprec_constdet_one_flavor_rat_monomial_w.cc, eoprec_constdet_one_flavor_rat_monomial5d_w.cc, wall_source_const.cc, sh_source_smearing.cc, sh_source_const.cc, sf_wall_source_const.cc, sf_sh_source_const.cc, sf_pt_source_const.cc, rndzNwall_source_const.cc, rndz2wall_source_const.cc, pt_source_smearing.cc, pt_source_const.cc, partwall_source_const.cc, norm_sh_source_const.cc, mom_source_const.cc, dilutezN_source_const.cc, diluteGrid_source_const.cc, dilute_zN_eigvec_source_const.cc, wall_sink_smearing.cc, sh_sink_smearing.cc, pt_sink_smearing.cc, norm_sh_sink_smearing.cc, syssolver_polyprec_cg.cc, syssolver_mdagm_richardson_multiprec_clover.cc, syssolver_mdagm_rel_ibicgstab_clover.cc, syssolver_mdagm_rel_cg_clover.cc, syssolver_mdagm_rel_bicgstab_clover.cc, syssolver_mdagm_OPTeigcg.cc, syssolver_mdagm_mr.cc, syssolver_mdagm_ibicgstab.cc, syssolver_mdagm_eigcg_qdp.cc, syssolver_mdagm_cg_timing.cc, syssolver_mdagm_cg_lf_clover.cc, syssolver_mdagm_cg_array.cc, syssolver_mdagm_cg.cc, syssolver_mdagm_bicgstab.cc, syssolver_linop_richardson_multiprec_clover.cc, syssolver_linop_rel_ibicgstab_clover.cc, syssolver_linop_rel_cg_clover.cc, syssolver_linop_rel_bicgstab_clover.cc, syssolver_linop_OPTeigbicg.cc, syssolver_linop_mr.cc, syssolver_linop_ibicgstab.cc, syssolver_linop_eigcg_array.cc, syssolver_linop_eigcg.cc, syssolver_linop_cg_timing.cc, syssolver_linop_cg_array.cc, syssolver_linop_cg.cc, syssolver_linop_bicrstab.cc, syssolver_linop_bicgstab.cc, syssolver_linop_quda_wilson.cc, syssolver_linop_quda_clover.cc, multi_syssolver_mdagm_cg_array.cc, multi_syssolver_mdagm_cg_accumulate_array.cc, multi_syssolver_mdagm_cg_accumulate.cc, multi_syssolver_mdagm_cg.cc, multi_syssolver_linop_mr.cc, eoprec_wilson_fermact_w.cc, eoprec_wilson_coarse_fine_fermact_w.cc, weak_gauge_init.h, weak_gauge_init.cc, unit_gauge_init.h, unit_gauge_init.cc, szinqio_gauge_init.h, szinqio_gauge_init.cc, szin_gauge_init.h, szin_gauge_init.cc, sf_gauge_init.h, sf_gauge_init.cc, nersc_gauge_init.h, nersc_gauge_init.cc, milc_gauge_init.h, milc_gauge_init.cc, kyu_gauge_init.h, kyu_gauge_init.cc, disordered_gauge_init.h, disordered_gauge_init.cc, cppacs_gauge_init.h, cppacs_gauge_init.cc, zero_guess_predictor.h, zero_guess_predictor.cc, null_predictor.h, null_predictor.cc, mre_initcg_extrap_predictor.h, mre_initcg_extrap_predictor.cc, mre_extrap_predictor.h, mre_extrap_predictor.cc, linear_extrap_predictor.h, linear_extrap_predictor.cc, last_solution_predictor.h, last_solution_predictor.cc, unprec_one_flavor_ratio_rat_rat_monomial5d_w.h, remez_rat_approx.cc, read_rat_approx.cc, gauge_monomial.h, eoprec_logdet_ee_monomial_w.cc, eoprec_constdet_two_flavor_polyprec_monomial_w.cc, eoprec_constdet_two_flavor_polynomial_monomial_w.cc, lcm_tst_min_norm2_recursive_dtau.h, lcm_tst_min_norm2_recursive_dtau.cc, lcm_tst_min_norm2_recursive.h, lcm_tst_min_norm2_recursive.cc, lcm_tst_leapfrog_recursive.h, lcm_tst_leapfrog_recursive.cc, lcm_sts_min_norm2_recursive_dtau.h, lcm_sts_min_norm2_recursive_dtau.cc, lcm_sts_min_norm2_recursive.h, lcm_sts_min_norm2_recursive.cc, lcm_sts_leapfrog_recursive.h, lcm_sts_leapfrog_recursive.cc, lcm_exp_tdt.h, lcm_exp_tdt.cc, lcm_exp_sdt.h, lcm_exp_sdt.cc, lcm_creutz_gocksch_4_recursive.h, lcm_creutz_gocksch_4_recursive.cc, lcm_4mn5fv_recursive.h, lcm_4mn5fv_recursive.cc, lcm_4mn5fp_recursive.h, lcm_4mn5fp_recursive.cc, lcm_4mn4fp_recursive.h, lcm_4mn4fp_recursive.cc, vector_quark_smearing.cc, stout_link_smearing.cc, simple_quark_displacement.cc, no_quark_smearing.cc, no_quark_displacement.cc, no_link_smearing.cc, jacobi_quark_smearing.cc, hyp_link_smearing.cc, gaus_quark_smearing.cc, gamma_displacement_w.cc, ape_link_smearing.cc, inline_link_smear.h, inline_link_smear.cc, inline_sfpcac_w.h, inline_sfpcac_w.cc, inline_psibarpsi_w.h, inline_psibarpsi_w.cc, inline_xml_write_obj.h, inline_xml_write_obj.cc, inline_usqcd_write_ddpairs_prop.h, inline_usqcd_write_ddpairs_prop.cc, inline_usqcd_read_ddpairs_prop.h, inline_usqcd_read_ddpairs_prop.cc, inline_szin_write_obj.h, inline_szin_write_obj.cc, inline_szin_read_obj.h, inline_szin_read_obj.cc, inline_rng.cc, inline_qio_write_obj.h, inline_qio_write_obj.cc, inline_qio_write_erase_obj.h, inline_qio_write_erase_obj.cc, inline_qio_read_obj.h, inline_qio_read_obj.cc, inline_nersc_write_obj.h, inline_nersc_write_obj.cc, inline_nersc_read_obj.h, inline_nersc_read_obj.cc, inline_list_obj.h, inline_list_obj.cc, inline_gaussian_obj.h, inline_gaussian_obj.cc, inline_erase_obj.h, inline_erase_obj.cc, inline_eigen_lime_colvec_read_obj.cc, inline_eigen_bin_lime_colvec_read_obj.cc, inline_eigen_bin_colvec_read_obj.cc, inline_spectrum_s.h, inline_spectrum_s.cc, inline_sink_smear_s.h, inline_sink_smear_s.cc, inline_propagator_s.h, inline_propagator_s.cc, inline_make_source_s.h, inline_make_source_s.cc, inline_apply_fermstate_s.h, inline_apply_fermstate_s.cc, inline_unit_prop_colorvec_w.cc, inline_stoch_meson_w.h, inline_stoch_meson_w.cc, inline_stoch_hadron_w.h, inline_stoch_hadron_w.cc, inline_stoch_group_meson_w.h, inline_stoch_group_meson_w.cc, inline_stoch_group_baryon_w.h, inline_stoch_group_baryon_w.cc, inline_stoch_baryon_w.h, inline_stoch_baryon_w.cc, inline_static_prop_colorvec_w.cc, inline_static_light_spec_w.h, inline_static_light_spec_w.cc, inline_stag_to_wils.h, inline_stag_to_wils.cc, inline_spectrumQll.h, inline_spectrumQll.cc, inline_spectrum_w.h, inline_spectrum_w.cc, inline_sink_smear_w.h, inline_sink_smear_w.cc, inline_seqsource_w.h, inline_seqsource_w.cc, inline_seqprop_test_w.h, inline_seqprop_test_w.cc, inline_rotate_spin_w.cc, inline_qqqNucNuc_w.h, inline_qqqNucNuc_w.cc, inline_qqq_w.h, inline_qqq_w.cc, inline_qqq_diquark_w.h, inline_qqq_diquark_w.cc, inline_qqbar_w.h, inline_qqbar_w.cc, inline_qpropqio_w.h, inline_qpropqio_w.cc, inline_qpropadd_w.h, inline_qpropadd_w.cc, inline_propagator_w.h, inline_propagator_w.cc, inline_propagator_ferm_w.cc, inline_prop_matelem_colorvec_w.cc, inline_prop_colorvec_w.cc, inline_prop_3pt_w.h, inline_prop_3pt_w.cc, inline_npr_w.h, inline_npr_w.cc, inline_npr_vertex_w.h, inline_npr_vertex_w.cc, inline_noisy_building_blocks_w.h, inline_noisy_building_blocks_w.cc, inline_multipole_w.h, inline_multipole_w.cc, inline_multi_propagator_w.h, inline_multi_propagator_w.cc, inline_mres_w.h, inline_mres_w.cc, inline_mesonspec_w.h, inline_mesonspec_w.cc, inline_meson_matelem_colorvec_w.cc, inline_meson_grid_matelem_w.cc, inline_meson_block_matelem_w.cc, inline_make_source_w.h, inline_make_source_w.cc, inline_make_source_ferm_w.h, inline_make_source_ferm_w.cc, inline_laplace_eigs.cc, inline_heavyhadspec_w.h, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.h, inline_heavy_light_cont_w.cc, inline_hadspec_w.h, inline_hadspec_w.cc, inline_hadron_contract.h, inline_hadron_contract.cc, inline_grid_prop_w.cc, inline_grid_prop_matelem_w.cc, inline_genprop_matelem_colorvec_w.cc, inline_gauge_transf_obj.cc, inline_disco_w.h, inline_disco_w.cc, inline_disco_eoprec_w.h, inline_disco_eoprec_w.cc, inline_disco_eo_eigcg_w.h, inline_disco_eo_eigcg_w.cc, inline_disco_eigcg_w.h, inline_disco_eigcg_w.cc, inline_diquark_w.h, inline_diquark_w.cc, inline_create_colorvecs.cc, inline_building_blocks_w.h, inline_building_blocks_w.cc, inline_block_prop_w.cc, inline_block_prop_matelem_w.cc, inline_block_orthog_colorvec.cc, inline_block_genprop_matelem_w.cc, inline_block_colorvecs.cc, inline_baryon_matelem_colorvec_w.cc, inline_baryon_block_matelem_w.cc, inline_bar3ptfn_w.h, inline_bar3ptfn_w.cc, inline_apply_fermstate_w.h, inline_apply_fermstate_w.cc, inline_annih_prop_matelem_colorvec_w.cc, inline_wilslp.h, inline_wilslp.cc, inline_random_transf_gauge.h, inline_random_transf_gauge.cc, inline_qnaive.cc, inline_qactden.cc, inline_polylp.h, inline_polylp.cc, inline_plaquette.h, inline_plaquette.cc, inline_fuzwilp.h, inline_fuzwilp.cc, inline_apply_gaugestate.h, inline_apply_gaugestate.cc, inline_coulgauge.h, inline_coulgauge.cc, inline_ritz_H_w.h, inline_ritz_H_w.cc, inline_eigbnds.h, inline_eigbnds.cc, simple_spin_insertion_w.h, simple_hadron_operator_w.h, simple_baryon_operator_w.h, simple_baryon_operator_w.cc, no_spin_insertion.h, no_spin_insertion.cc, group_baryon_operator_w.cc, dilution_quark_source_const_w.h, dilution_quark_source_const_w.cc, stout_gaugestate.h, stout_gaugestate.cc, simple_gaugestate.h, simple_gaugestate.cc, periodic_gaugestate.h, periodic_gaugestate.cc, simple_gaugebc.h, simple_gaugebc.cc, schr_triv_gaugebc.h, schr_triv_gaugebc.cc, schr_sf_zero_gaugebc.h, schr_sf_zero_gaugebc.cc, schr_nonpert_gaugebc.h, schr_nonpert_gaugebc.cc, schr_dirich_gaugebc.h, schr_dirich_gaugebc.cc, schr_coupling_gaugebc.h, schr_coupling_gaugebc.cc, schr_chromomag_gaugebc.h, schr_chromomag_gaugebc.cc, periodic_gaugebc.h, periodic_gaugebc.cc, wilson_gaugeact.h, wilson_gaugeact.cc, wilson_coarse_fine_gaugeact.h, wilson_coarse_fine_gaugeact.cc, wilson_coarse_fine_1loop_gaugeact.h, wilson_coarse_fine_1loop_gaugeact.cc, temporal_wilson_gaugeact.h, temporal_wilson_gaugeact.cc, spatial_wilson_gaugeact.h, spatial_wilson_gaugeact.cc, spatial_two_plaq_gaugeact.h, spatial_two_plaq_gaugeact.cc, rg_gaugeact.h, rg_gaugeact.cc, rect_gaugeact.h, rect_gaugeact.cc, rbc_gaugeact.h, rbc_gaugeact.cc, plaq_plus_spatial_two_plaq_gaugeact.h, plaq_plus_spatial_two_plaq_gaugeact.cc, plaq_gaugeact.h, plaq_gaugeact.cc, pg_gaugeact.h, pg_gaugeact.cc, lw_tree_gaugeact.h, lw_tree_gaugeact.cc, lw_1loop_gaugeact.h, lw_1loop_gaugeact.cc, aniso_sym_temporal_gaugeact.h, aniso_sym_temporal_gaugeact.cc, aniso_sym_spatial_gaugeact.h, aniso_sym_spatial_gaugeact.cc, aniso_spectrum_gaugeact.h, aniso_spectrum_gaugeact.cc, stout_fermstate_w.h, stout_fermstate_w.cc, simple_fermstate_w.h, simple_fermstate_w.cc, simple_fermstate_s.h, simple_fermstate_s.cc, periodic_fermstate_w.h, periodic_fermstate_w.cc, periodic_fermstate_s.h, periodic_fermstate_s.cc, extfield_fermstate_w.h, extfield_fermstate_w.cc, twisted_fermbc_w.h, twisted_fermbc_w.cc, simple_fermbc_w.h, simple_fermbc_w.cc, simple_fermbc_s.h, simple_fermbc_s.cc, simple_fermbc.cc, schr_triv_fermbc_w.h, schr_triv_fermbc_w.cc, schr_nonpert_fermbc_w.h, schr_nonpert_fermbc_w.cc, schr_dirich_fermbc_w.h, schr_dirich_fermbc_w.cc, schr_coupling_fermbc_w.h, schr_coupling_fermbc_w.cc, schr_chromomag_fermbc_w.h, schr_chromomag_fermbc_w.cc, periodic_fermbc_w.h, periodic_fermbc_w.cc, unprec_zolo_nef_fermact_array_w.h, unprec_zolo_nef_fermact_array_w.cc, unprec_wilson_fermact_w.h, unprec_wilson_fermact_w.cc, unprec_w12_fermact_w.h, unprec_w12_fermact_w.cc, unprec_twm_fermact_array_w.h, unprec_twm_fermact_array_w.cc, unprec_parwilson_fermact_w.h, unprec_parwilson_fermact_w.cc, unprec_ovlap_contfrac5d_fermact_array_w.h, unprec_ovlap_contfrac5d_fermact_array_w.cc, unprec_ovext_fermact_array_w.h, unprec_ovext_fermact_array_w.cc, unprec_ovdwf_fermact_array_w.h, unprec_ovdwf_fermact_array_w.cc, unprec_nef_fermact_array_w.h, unprec_nef_fermact_array_w.cc, unprec_ht_contfrac5d_fermact_array_w.h, unprec_ht_contfrac5d_fermact_array_w.cc, unprec_hamberwu_fermact_w.h, unprec_hamberwu_fermact_w.cc, unprec_graphene_fermact_w.h, unprec_graphene_fermact_w.cc, unprec_dwftransf_fermact_w.h, unprec_dwftransf_fermact_w.cc, unprec_dwf_fermact_array_w.h, unprec_dwf_fermact_array_w.cc, unprec_clover_fermact_w.h, unprec_clover_fermact_w.cc, tprec_wilson_fermact_w.h, poly_cheb_fermact_w.h, poly_cheb_fermact_w.cc, ovlap_partfrac4d_fermact_w.h, ovlap_partfrac4d_fermact_w.cc, ovext_neuberger_strategy.h, ovext_neuberger_strategy.cc, ovext_constant_strategy.h, ovext_constant_strategy.cc, ovext_const_div_by_resp_strategy.h, ovext_const_div_by_resp_strategy.cc, klein_gordon_fermact_s.h, klein_gordon_fermact_s.cc, hisq_fermact_s.h, hisq_fermact_s.cc, eoprec_zolo_nef_fermact_array_w.h, eoprec_zolo_nef_fermact_array_w.cc, eoprec_wilson_fermact_w.h, eoprec_wilson_coarse_fine_fermact_w.h, eoprec_twm_fermact_array_w.h, eoprec_twm_fermact_array_w.cc, eoprec_slrc_fermact_w.h, eoprec_slrc_fermact_w.cc, eoprec_slic_fermact_w.h, eoprec_slic_fermact_w.cc, eoprec_parwilson_fermact_w.h, eoprec_parwilson_fermact_w.cc, eoprec_ovlap_contfrac5d_fermact_array_w.h, eoprec_ovlap_contfrac5d_fermact_array_w.cc, eoprec_ovext_fermact_array_w.h, eoprec_ovext_fermact_array_w.cc, eoprec_ovdwf_fermact_array_w.h, eoprec_ovdwf_fermact_array_w.cc, eoprec_nef_fermact_array_w.h, eoprec_nef_fermact_array_w.cc, eoprec_kno_fermact_array_w.h, eoprec_kno_fermact_array_w.cc, eoprec_ht_contfrac5d_fermact_array_w.h, eoprec_ht_contfrac5d_fermact_array_w.cc, eoprec_dwf_fermact_array_w.h, eoprec_dwf_fermact_array_w.cc, eoprec_clover_orbifold_fermact_w.h, eoprec_clover_orbifold_fermact_w.cc, eoprec_clover_fermact_w.h, eoprec_clover_fermact_w.cc, eoprec_clover_extfield_fermact_w.h, eoprec_clover_extfield_fermact_w.cc, asqtad_fermact_s.h, asqtad_fermact_s.cc
• Ncb : pade_trln_w.cc, invbicg.cc
• Nf : common_declarations.h
• nhit : mespbg5p_w.cc
• Nimpr : pade_trln_w.cc
• Nkappa : pade_trln_w.cc
• No_fmn : enum_gaugeacttype_io.h, enum_gaugeacttype_io.cc
• NOperEig : common_declarations.h
• NOperEigDim : common_declarations.h
• Npade : pade_trln_w.cc
• num_points : qtopcor.cc
• NumCool : topol.cc
• NumPolyRoots : common_declarations.h
• NumTop : topol.cc
• NWilsVec : eoprec_dwf_fermact_array_w.cc

- o -

• Omega_impr : pade_trln_w.cc
• out : asqtad_cps_wrapper_qprop.cc
• output_filename : chroma_init.cc
• OverAuxAct : common_declarations.h
• OverMass : common_declarations.h, eoprec_dwf_fermact_array_w.cc

- p -

• Pade_b : pade_trln_w.cc
• Pade_b0 : pade_trln_w.cc
• Pade_c : pade_trln_w.cc
• pbp_st : mespbg5p_w.cc
• PolyArgResc : common_declarations.h
• PolyDegHalf : common_declarations.h
• PolyError : common_declarations.h
• PolyEvolP : common_declarations.h
• PolyNorm : common_declarations.h
• PolyPowDen : common_declarations.h
• PolyPowNum : common_declarations.h
• PolyRangLow : common_declarations.h
• PolyRangUp : common_declarations.h
• PolyRoots : common_declarations.h
• private_id : default_gauge_field.cc
• prop_header : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• psi_bar_psi : mespbp_s.cc
• psibp_imp : pade_trln_w.cc
• psibp_unimp : pade_trln_w.cc
• psix : ldumul_w.cc
• pTrackerArray : singleton.h

- q -

• q : inline_laplace_eigs.cc, mesq.cc
• qtop : meslate.cc
• qtop_den : qtopcor.cc
• quark_propagator_id : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc

- r -

• RalgP : common_declarations.h
• RatEvolP : common_declarations.h
• RatPolyDeg : common_declarations.h
• refcount : lwldslash_w_pab.h, lwldslash_w_pab.cc
• RefNextTrj : common_declarations.h
• regisered : enum_quda_io.cc
• registered : weak_gauge_init.cc, unit_gauge_init.cc, szinqio_gauge_init.cc, szin_gauge_init.cc, sf_gauge_init.cc, nersc_gauge_init.cc, milc_gauge_init.cc, kyu_gauge_init.cc, gauge_init_aggregate.cc, disordered_gauge_init.cc, cppacs_gauge_init.cc, zero_guess_predictor.cc, predictor_aggregate.cc, null_predictor.cc, mre_initcg_extrap_predictor.cc, mre_extrap_predictor.cc, linear_extrap_predictor.cc, last_solution_predictor.cc, unprec_two_flavor_ratio_conv_rat_monomial_w.cc, unprec_two_flavor_ratio_conv_rat_monomial5d_w.cc, unprec_two_flavor_ratio_conv_conv_monomial_w.cc, unprec_two_flavor_ratio_conv_conv_monomial5d_w.cc, unprec_two_flavor_monomial_w.cc, unprec_two_flavor_monomial5d_w.cc, unprec_one_flavor_ratio_rat_rat_monomial_w.cc, unprec_one_flavor_ratio_rat_rat_monomial5d_w.cc, unprec_one_flavor_ratio_rat_conv_monomial_w.cc, unprec_one_flavor_ratio_rat_conv_monomial5d_w.cc, unprec_one_flavor_rat_monomial_w.cc, unprec_one_flavor_rat_monomial5d_w.cc, remez_rat_approx.cc, read_rat_approx.cc, rat_approx_aggregate.cc, monomial_aggregate_w.cc, gauge_monomial.cc, fixed_random_ferm_monomial.cc, eoprec_logdet_two_flavor_monomial_w.cc, eoprec_logdet_ee_monomial_w.cc, eoprec_constdet_two_flavor_ratio_conv_rat_monomial_w.cc, eoprec_constdet_two_flavor_ratio_conv_rat_monomial5d_w.cc, eoprec_constdet_two_flavor_ratio_conv_conv_monomial_w.cc, eoprec_constdet_two_flavor_ratio_conv_conv_monomial5d_w.cc, eoprec_constdet_two_flavor_polyprec_monomial_w.cc, eoprec_constdet_two_flavor_polynomial_monomial_w.cc, eoprec_constdet_two_flavor_monomial_w.cc, eoprec_constdet_two_flavor_monomial5d_w.cc, eoprec_constdet_one_flavor_ratio_rat_rat_monomial_w.cc, eoprec_constdet_one_flavor_ratio_rat_rat_monomial5d_w.cc, eoprec_constdet_one_flavor_ratio_rat_conv_monomial_w.cc, eoprec_constdet_one_flavor_ratio_rat_conv_monomial5d_w.cc, eoprec_constdet_one_flavor_rat_monomial_w.cc, eoprec_constdet_one_flavor_rat_monomial5d_w.cc, lcm_tst_min_norm2_recursive_dtau.cc, lcm_tst_min_norm2_recursive.cc, lcm_tst_leapfrog_recursive.cc, lcm_sts_min_norm2_recursive_dtau.cc, lcm_sts_min_norm2_recursive.cc, lcm_sts_leapfrog_recursive.cc, lcm_exp_tdt.cc, lcm_exp_sdt.cc, lcm_creutz_gocksch_4_recursive.cc, lcm_4mn5fv_recursive.cc, lcm_4mn5fp_recursive.cc, lcm_4mn4fp_recursive.cc, integrator_aggregate.cc, wall_source_const.cc, source_smearing_aggregate.cc, source_const_aggregate.cc, sh_source_smearing.cc, sh_source_const.cc, sf_wall_source_const.cc, sf_sh_source_const.cc, sf_pt_source_const.cc, rndzNwall_source_const.cc, rndz2wall_source_const.cc, pt_source_smearing.cc, pt_source_const.cc, partwall_source_const.cc, norm_sh_source_const.cc, mom_source_const.cc, dilutezN_source_const.cc, diluteGrid_source_const.cc, dilute_zN_eigvec_source_const.cc, vector_quark_smearing.cc, stout_link_smearing.cc, simple_quark_displacement.cc, quark_smearing_aggregate.cc, quark_flavor_s.cc, quark_displacement_aggregate.cc, no_quark_smearing.cc, no_quark_displacement.cc, no_link_smearing.cc, link_smearing_aggregate.cc, jacobi_quark_smearing.cc, hyp_link_smearing.cc, gaus_quark_smearing.cc, gamma_displacement_w.cc, deriv_quark_displacement_w.cc, deriv_quark_displacement_s.cc, ape_link_smearing.cc, wall_sink_smearing.cc, sink_smearing_aggregate.cc, sh_sink_smearing.cc, pt_sink_smearing.cc, norm_sh_sink_smearing.cc, inline_smear_aggregate.cc, inline_link_smear.cc, inline_sfpcac_w.cc, inline_schrfun_aggregate.cc, inline_psibarpsi_w.cc, inline_pbp_aggregate.cc, xml_write_obj_funcmap.cc, szin_write_obj_funcmap.cc, szin_read_obj_funcmap.cc, qio_write_obj_funcmap.cc, qio_read_obj_funcmap.cc, inline_xml_write_obj.cc, inline_usqcd_write_ddpairs_prop.cc, inline_usqcd_read_ddpairs_prop.cc, inline_szin_write_obj.cc, inline_szin_read_obj.cc, inline_rng.cc, inline_qio_write_obj.cc, inline_qio_write_erase_obj.cc, inline_qio_read_obj.cc, inline_nersc_write_obj.cc, inline_nersc_read_obj.cc, inline_list_obj.cc, inline_io_aggregate.cc, inline_gaussian_obj.cc, inline_erase_obj.cc, inline_eigen_lime_colvec_read_obj.cc, inline_eigen_bin_lime_colvec_read_obj.cc, inline_eigen_bin_colvec_read_obj.cc, inline_aggregate.cc, inline_spectrum_s.cc, inline_sink_smear_s.cc, inline_propagator_s.cc, inline_make_source_s.cc, inline_hadron_aggregate_s.cc, inline_apply_fermstate_s.cc, inline_unit_prop_colorvec_w.cc, inline_stoch_meson_w.cc, inline_stoch_hadron_w.cc, inline_stoch_group_meson_w.cc, inline_stoch_group_baryon_w.cc, inline_stoch_baryon_w.cc, inline_static_prop_colorvec_w.cc, inline_static_light_spec_w.cc, inline_stag_to_wils.cc, inline_spectrumQll.cc, inline_spectrum_w.cc, inline_sink_smear_w.cc, inline_seqsource_w.cc, inline_seqprop_test_w.cc, inline_rotate_spin_w.cc, inline_qqqNucNuc_w.cc, inline_qqq_w.cc, inline_qqq_diquark_w.cc, inline_qqbar_w.cc, inline_qpropqio_w.cc, inline_qpropadd_w.cc, inline_propagator_w.cc, inline_propagator_ferm_w.cc, inline_prop_matelem_colorvec_w.cc, inline_prop_colorvec_w.cc, inline_prop_3pt_w.cc, inline_npr_w.cc, inline_npr_vertex_w.cc, inline_noisy_building_blocks_w.cc, inline_multipole_w.cc, inline_multi_propagator_w.cc, inline_mres_w.cc, inline_mesonspec_w.cc, inline_meson_matelem_colorvec_w.cc, inline_meson_grid_matelem_w.cc, inline_meson_block_matelem_w.cc, inline_make_source_w.cc, inline_make_source_ferm_w.cc, inline_laplace_eigs.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc, inline_hadron_contract.cc, inline_hadron_aggregate.cc, inline_grid_prop_w.cc, inline_grid_prop_matelem_w.cc, inline_genprop_matelem_colorvec_w.cc, inline_gauge_transf_obj.cc, inline_disco_w.cc, inline_disco_eoprec_w.cc, inline_disco_eo_eigcg_w.cc, inline_disco_eigcg_w.cc, inline_diquark_w.cc, inline_create_colorvecs.cc, inline_building_blocks_w.cc, inline_block_prop_w.cc, inline_block_prop_matelem_w.cc, inline_block_orthog_colorvec.cc, inline_block_genprop_matelem_w.cc, inline_block_colorvecs.cc, inline_baryon_matelem_colorvec_w.cc, inline_baryon_block_matelem_w.cc, inline_bar3ptfn_w.cc, inline_apply_fermstate_w.cc, inline_annih_prop_matelem_colorvec_w.cc, inline_wilslp.cc, inline_random_transf_gauge.cc, inline_qnaive.cc, inline_qactden.cc, inline_polylp.cc, inline_plaquette.cc, inline_glue_aggregate.cc, inline_fuzwilp.cc, inline_apply_gaugestate.cc, inline_gfix_aggregate.cc, inline_coulgauge.cc, inline_ritz_H_w.cc, inline_eigbnds.cc, inline_eig_aggregate.cc, stoch_cond_cont_w.cc, spin_insertion_aggregate.cc, simple_spin_insertion_w.cc, simple_meson_2pt_w.cc, simple_baryon_seqsrc_w.cc, simple_baryon_operator_w.cc, seqsource_aggregate_w.cc, photon_seqsrc_w.cc, no_spin_insertion.cc, meson_spec_2pt_w.cc, hadron_contract_aggregate.cc, group_baryon_operator_w.cc, dilution_scheme_aggregate.cc, dilution_quark_source_const_w.cc, deriv_meson_seqsrc_w.cc, delta_2pt_w.cc, baryon_spinmat_funcmap_w.cc, baryon_operator_aggregate_w.cc, enum_wavetype_io.h, enum_wavetype_io.cc, enum_stochsrc_io.h, enum_stochsrc_io.cc, enum_simplebctype_io.h, enum_simplebctype_io.cc, enum_quarkspintype_io.h, enum_quarkspintype_io.cc, enum_qdpvolfmt_io.h, enum_qdpvolfmt_io.cc, enum_proptype_io.h, enum_proptype_io.cc, enum_plusminus_io.h, enum_plusminus_io.cc, enum_mesonop_io.h, enum_mesonop_io.cc, enum_md_integrator_type_io.h, enum_md_integrator_type_io.cc, enum_inner_solver_type_io.h, enum_inner_solver_type_io.cc, enum_heatbathtype_io.h, enum_heatbathtype_io.cc, enum_gaugeacttype_io.h, enum_gaugeacttype_io.cc, enum_fermtype_io.h, enum_fermtype_io.cc, enum_eigenvectype_io.h, enum_eigenvectype_io.cc, enum_coeffs_io.h, enum_coeffs_io.cc, enum_cfgtype_io.h, enum_cfgtype_io.cc, stout_gaugestate.cc, simple_gaugestate.cc, periodic_gaugestate.cc, gauge_createstate_aggregate.cc, simple_gaugebc.cc, schr_triv_gaugebc.cc, schr_sf_zero_gaugebc.cc, schr_nonpert_gaugebc.cc, schr_dirich_gaugebc.cc, schr_coupling_gaugebc.cc, schr_chromomag_gaugebc.cc, periodic_gaugebc.cc, gaugebc_aggregate.cc, wilson_gaugeact.cc, wilson_coarse_fine_gaugeact.cc, wilson_coarse_fine_1loop_gaugeact.cc, temporal_wilson_gaugeact.cc, spatial_wilson_gaugeact.cc, spatial_two_plaq_gaugeact.cc, rg_gaugeact.cc, rect_gaugeact.cc, rbc_gaugeact.cc, plaq_plus_spatial_two_plaq_gaugeact.cc, plaq_gaugeact.cc, pg_gaugeact.cc, lw_tree_gaugeact.cc, lw_1loop_gaugeact.cc, gaugeacts_aggregate.cc, aniso_sym_temporal_gaugeact.cc, aniso_sym_spatial_gaugeact.cc, aniso_spectrum_gaugeact.cc, syssolver_polyprec_cg.cc, syssolver_polyprec_aggregate.cc, syssolver_mdagm_richardson_multiprec_clover.cc, syssolver_mdagm_rel_ibicgstab_clover.cc, syssolver_mdagm_rel_cg_clover.cc, syssolver_mdagm_rel_bicgstab_clover.cc, syssolver_mdagm_OPTeigcg.cc, syssolver_mdagm_mr.cc, syssolver_mdagm_ibicgstab.cc, syssolver_mdagm_eigcg_qdp.cc, syssolver_mdagm_cg_timing.cc, syssolver_mdagm_cg_lf_clover.cc, syssolver_mdagm_cg_array.cc, syssolver_mdagm_cg.cc, syssolver_mdagm_bicgstab.cc, syssolver_mdagm_aggregate.cc, syssolver_linop_richardson_multiprec_clover.cc, syssolver_linop_rel_ibicgstab_clover.cc, syssolver_linop_rel_cg_clover.cc, syssolver_linop_rel_bicgstab_clover.cc, syssolver_linop_OPTeigbicg.cc, syssolver_linop_mr.cc, syssolver_linop_ibicgstab.cc, syssolver_linop_eigcg_array.cc, syssolver_linop_eigcg.cc, syssolver_linop_cg_timing.cc, syssolver_linop_cg_array.cc, syssolver_linop_cg.cc, syssolver_linop_bicrstab.cc, syssolver_linop_bicgstab.cc, syssolver_linop_aggregate.cc, syssolver_linop_quda_wilson.cc, syssolver_linop_quda_clover.cc, enum_quda_io.h, multi_syssolver_mdagm_cg_array.cc, multi_syssolver_mdagm_cg_accumulate_array.cc, multi_syssolver_mdagm_cg_accumulate.cc, multi_syssolver_mdagm_cg.cc, multi_syssolver_mdagm_aggregate.cc, multi_syssolver_mdagm_accumulate_aggregate.cc, multi_syssolver_linop_mr.cc, multi_syssolver_linop_aggregate.cc, stout_fermstate_w.cc, simple_fermstate_w.cc, simple_fermstate_s.cc, periodic_fermstate_w.cc, periodic_fermstate_s.cc, ferm_createstate_aggregate_w.cc, ferm_createstate_aggregate_s.cc, extfield_fermstate_w.cc, extfield_aggregate_w.cc, twisted_fermbc_w.cc, simple_fermbc_w.cc, simple_fermbc_s.cc, schr_triv_fermbc_w.cc, schr_nonpert_fermbc_w.cc, schr_dirich_fermbc_w.cc, schr_coupling_fermbc_w.cc, schr_chromomag_fermbc_w.cc, periodic_fermbc_w.cc, fermbcs_aggregate_w.cc, fermbcs_aggregate_s.cc, unprec_zolo_nef_fermact_array_w.cc, unprec_wilson_fermact_w.cc, unprec_w12_fermact_w.cc, unprec_twm_fermact_array_w.cc, unprec_parwilson_fermact_w.cc, unprec_ovlap_contfrac5d_fermact_array_w.cc, unprec_ovext_fermact_array_w.cc, unprec_ovdwf_fermact_array_w.cc, unprec_nef_fermact_array_w.cc, unprec_ht_contfrac5d_fermact_array_w.cc, unprec_hamberwu_fermact_w.cc, unprec_graphene_fermact_w.cc, unprec_dwftransf_fermact_w.cc, unprec_dwf_fermact_array_w.cc, unprec_clover_fermact_w.cc, tprec_wilson_fermact_w.cc, poly_cheb_fermact_w.cc, ovlap_partfrac4d_fermact_w.cc, ovext_tuning_strategy_aggregate.cc, ovext_neuberger_strategy.cc, ovext_constant_strategy.cc, ovext_const_div_by_resp_strategy.cc, klein_gordon_fermact_s.cc, hisq_fermact_s.cc, fermacts_aggregate_w.cc, fermacts_aggregate_s.cc, eoprec_zolo_nef_fermact_array_w.cc, eoprec_wilson_fermact_w.cc, eoprec_wilson_coarse_fine_fermact_w.cc, eoprec_twm_fermact_array_w.cc, eoprec_slrc_fermact_w.cc, eoprec_slic_fermact_w.cc, eoprec_parwilson_fermact_w.cc, eoprec_ovlap_contfrac5d_fermact_array_w.cc, eoprec_ovext_fermact_array_w.cc, eoprec_ovdwf_fermact_array_w.cc, eoprec_nef_fermact_array_w.cc, eoprec_kno_fermact_array_w.cc, eoprec_ht_contfrac5d_fermact_array_w.cc, eoprec_dwf_fermact_array_w.cc, eoprec_clover_orbifold_fermact_w.cc, eoprec_clover_fermact_w.cc, eoprec_clover_extfield_fermact_w.cc, asqtad_fermact_s.cc
• RsdBiCG : invbicg.cc
• RsdCG : pbg5p_w.cc
• RsdCGMC : common_declarations.h
• RsdCGMD : common_declarations.h
• RsdCGMDFctr : common_declarations.h
• RsdCGMDMax : common_declarations.h
• RsdMR : pade_trln_w.cc

- s -

• S_f : pbg5p_w.cc
• S_ratio : meslate.cc
• sink_disp_type : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• sink_prop_1 : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• sink_prop_2 : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• sink_prop_3 : inline_heavy_light_cont_w.cc
• sink_type : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• sinkRecordName : inline_usqcd_write_ddpairs_prop.cc
• smearing_secs : stout_utils.cc
• source_disp_type : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• source_type : inline_static_light_spec_w.cc, inline_mesonspec_w.cc, inline_heavyhadspec_w.cc, inline_heavy_light_cont_w.cc, inline_hadspec_w.cc
• sp : simple_baryon_seqsrc_w.cc
• state : pbg5p_w.cc
• sym_tensor3d : symtensor.cc

- t -

• T : t_stout_state.cc, t_clover.cc, staggered_operators_s.cc, inline_disco_eoprec_w.cc, inline_disco_eo_eigcg_w.cc, inline_disco_eigcg_w.cc, simple_baryon_seqsrc_w.cc
• t_slice : meslate.cc
• tau0 : common_declarations.h
• time_spent : taproj.cc, reunit.cc, expmat.cc, rect_gaugeact.cc, plaq_plus_spatial_two_plaq_gaugeact.cc
• TopAccu : topol.cc
• trlns_imp : pade_trln_w.cc
• trlns_unimp : pade_trln_w.cc
• twopi : chromabase.h
• typeIDString : enum_wavetype_io.h, enum_wavetype_io.cc, enum_stochsrc_io.h, enum_stochsrc_io.cc, enum_simplebctype_io.h, enum_simplebctype_io.cc, enum_quarkspintype_io.h, enum_quarkspintype_io.cc, enum_qdpvolfmt_io.h, enum_qdpvolfmt_io.cc, enum_proptype_io.h, enum_proptype_io.cc, enum_plusminus_io.h, enum_plusminus_io.cc, enum_mesonop_io.h, enum_mesonop_io.cc, enum_md_integrator_type_io.h, enum_md_integrator_type_io.cc, enum_inner_solver_type_io.h, enum_inner_solver_type_io.cc, enum_heatbathtype_io.h, enum_heatbathtype_io.cc, enum_gaugeacttype_io.h, enum_gaugeacttype_io.cc, enum_fermtype_io.h, enum_fermtype_io.cc, enum_eigenvectype_io.h, enum_eigenvectype_io.cc, enum_coeffs_io.h, enum_coeffs_io.cc, enum_cfgtype_io.h, enum_cfgtype_io.cc, enum_quda_io.h, enum_quda_io.cc

- u -

• U : t_aniso_gaugeact.cc, zolotarev_coeffs.cc
• u : pade_trln_w.cc
• u0 : common_declarations.h

- x -

• xmlLogP : chroma_init.cc
• xmlOutputP : chroma_init.cc
• XX : syssolver_mdagm_OPTeigcg.cc, syssolver_linop_OPTeigbicg.cc

- y -

• YY : syssolver_mdagm_OPTeigcg.cc, syssolver_linop_OPTeigbicg.cc

---